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CmoCh11G013450 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGTTCCCCTCGACCAGCTCCAACCCCCGCCCTCTGCCGCCGCCATACACCCCGCCCAGGGCTCCGTCGGCCCCGTCATCGCCGTCCTTGCAGTGATTTCCATCCTCGGCTTCATTGCCGGCATGATCGGCCGCGTCTGCTTTGGCCGTCCCGTTTTTGGCTACAACGCCCAGTACGACGTCGAAGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGGTCTCTAGACCCTCCCCCGCATCTCCGCCCCCCGCCACCGATCGAAGCTATTCCGGTGTCGGAGCCGCTTGGTGGGCCGCCGAACATCAAAGAAGGTGGCGATGGCGATAGGGAACGCGAGAATCTGCAGTCGGTGGCTCCCGGCAGTGGCGGTGAGTCGTGA ATGTCCGTTCCCCTCGACCAGCTCCAACCCCCGCCCTCTGCCGCCGCCATACACCCCGCCCAGGGCTCCGTCGGCCCCGTCATCGCCGTCCTTGCAGTGATTTCCATCCTCGGCTTCATTGCCGGCATGATCGGCCGCGTCTGCTTTGGCCGTCCCGTTTTTGGCTACAACGCCCAGTACGACGTCGAAGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGGTCTCTAGACCCTCCCCCGCATCTCCGCCCCCCGCCACCGATCGAAGCTATTCCGGTGTCGGAGCCGCTTGGTGGGCCGCCGAACATCAAAGAAGGTGGCGATGGCGATAGGGAACGCGAGAATCTGCAGTCGGTGGCTCCCGGCAGTGGCGGTGAGTCGTGA ATGTCCGTTCCCCTCGACCAGCTCCAACCCCCGCCCTCTGCCGCCGCCATACACCCCGCCCAGGGCTCCGTCGGCCCCGTCATCGCCGTCCTTGCAGTGATTTCCATCCTCGGCTTCATTGCCGGCATGATCGGCCGCGTCTGCTTTGGCCGTCCCGTTTTTGGCTACAACGCCCAGTACGACGTCGAAGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGGTCTCTAGACCCTCCCCCGCATCTCCGCCCCCCGCCACCGATCGAAGCTATTCCGGTGTCGGAGCCGCTTGGTGGGCCGCCGAACATCAAAGAAGGTGGCGATGGCGATAGGGAACGCGAGAATCTGCAGTCGGTGGCTCCCGGCAGTGGCGGTGAGTCGTGA MSVPLDQLQPPPSAAAIHPAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVFGYNAQYDVEDWVEKKCASCLDGSLDPPPHLRPPPPIEAIPVSEPLGGPPNIKEGGDGDRERENLQSVAPGSGGES Homology
BLAST of CmoCh11G013450 vs. ExPASy TrEMBL
Match: A0A6J1ELS6 (uncharacterized protein LOC111434531 OS=Cucurbita moschata OX=3662 GN=LOC111434531 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 4.0e-66 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of CmoCh11G013450 vs. ExPASy TrEMBL
Match: A0A6J1JMK0 (uncharacterized protein LOC111486567 OS=Cucurbita maxima OX=3661 GN=LOC111486567 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.8e-61 Identity = 121/129 (93.80%), Postives = 125/129 (96.90%), Query Frame = 0
BLAST of CmoCh11G013450 vs. ExPASy TrEMBL
Match: A0A6J1IBA8 (uncharacterized protein LOC111470940 OS=Cucurbita maxima OX=3661 GN=LOC111470940 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.9e-44 Identity = 97/130 (74.62%), Postives = 107/130 (82.31%), Query Frame = 0
BLAST of CmoCh11G013450 vs. ExPASy TrEMBL
Match: A0A5A7SPN0 (Type IV secretion system protein virB10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00320 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.5e-44 Identity = 97/137 (70.80%), Postives = 110/137 (80.29%), Query Frame = 0
BLAST of CmoCh11G013450 vs. ExPASy TrEMBL
Match: A0A1S3C1T9 (type IV secretion system protein virB10-like OS=Cucumis melo OX=3656 GN=LOC103495668 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.5e-44 Identity = 97/137 (70.80%), Postives = 110/137 (80.29%), Query Frame = 0
BLAST of CmoCh11G013450 vs. TAIR 10
Match: AT2G26520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57500.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 3.7e-11 Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 0
BLAST of CmoCh11G013450 vs. TAIR 10
Match: AT3G57500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26520.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 1.2e-09 Identity = 40/110 (36.36%), Postives = 56/110 (50.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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