CmoCh11G012870 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G012870
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	disease resistance protein RGA2-like
Location	Cmo_Chr11: 8630968 .. 8643906 (+)
RNA-Seq Expression	CmoCh11G012870
Synteny	CmoCh11G012870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACATAGGTGTATCAGTCCATCAAATTTTCAAGTATTTCAGAACTTTTCAAACAAATTGTTGATAATGAATGTTATATTCTATCAAAAGTTCATGTACACCAACATTCTATCACATATGGATGTAGTACTATTTGTAGTTTGTTTATACATCTACCATGGGGTGAGTTATTTGAGTTAAGATGAATGCAAGTGTGTAATTCCTCATTTTATCCTTTTTGTGTTTTCATCCTAGTACAATTTTGAAAACTTGTTTTTAAATTTTAAACTTCGTAATCTAATGAAGAAATATTATTTTAAAAGCAAATTTTGCAACTAATAAAACTTTATATTTGCAAATTGATTTTTTCTAGTAAACTTGATTATTAACCTCTTATCATATTTAAGATCACATATGCAACAAAGAAATTTTTAATGAAAATGGATGGAAGAAGCCTATAGTAACTTACTAGGTCAATGATACGATTAGAGTCTACAAGTAGGTTGTTTACTGATTATATTTATACTCATGAGATACTACTTTCATTTTAGGTGACTAATGAATGTTGGTCGAGGTAGAAGAGTGTTTAGGAGTTGTGCGATTATAGAGAAGGGTCGTCCTGGAGCGTCAGTCTTATGACACCGTTAGGGGTTGTCATCAATATATTTTTGTATCTCATTCCCTAGTCTCGTTTTGTAATAAACTTTTGAACAACACTTTAATTTGTAAACGTTTCTTAAATTGTGTAAAAGATTGAAAAAGCTAGAATAATCATCTTTCTTATTGTCAAAAGTATTGAAATATAAAGTTCGCACTTGAGATTTTGAAGAATACGAATAAATTTGTAATGGTTTTGGATGATGAGCTTGACAAGCTCAAACATACTATTTCAGCCATGAAAGCTGTGCTTCTTGATGCAGAGGAGCCACAGTCCAAGAGCAATGCAGAACATAATTGGATTTCAAGGGTCAAAGAGGCTTTCTACACTGTGGATAACTTGATTGGTAAAAGATGGGCCAAAGAGGTTCGTGGAATAACTATTCAGATTTTTCATTTTTGTCTAATTGGGTTAAGACCCGCGGCTCGACTTGGCGGCTTAGTTGGTCGGCTTGGCAGCTCGGCTTGGTGACTCAGTATCACTATAATATATCGATTCCAAGGTTTTCGACCCTTCCGAAGCTGTTTTTTGCCCTTAGTTTTACCATCCGAGGTCAGTATGGTTCCTAAACGTTAAAGACAGATTAGGTCGGGGGTTTATCTTGATAAATAGCATGAGGTTTAGCTAGGTATGTTATGAAAGGTTCTAAGTTTTCATGTGGTTATCATAGAACGTATTTAACCGTTGGGAGTAGCTCGTTGTGAGTGACTTCAACCAAAACCATCGAGGTAAGTGACCTTACTGTTGAAGTTAGCTTACTACATGTTGTATGATGGTGCATGCCCTGTGGCCCCTGCATGCACCATATTTATGTGATATGACTATGTGATGTATGAATTATGTTGACTGTTGACTATTTATGTTATGTGAAGTTATAATGATATGTTAGTAGTATATGCCATGAAAAGGTTGATCGATGTCATGTATACACGTAGTATTCTCGAGTCATGTCATAAGATATTTATGCAACTGGAATGCACTTTCATGTTATGTAATATGTCATGTGAGATGCCATGTAATATAAGAACGTATATGCGATGTTAGCACTGCTTATGTAATGTCATGTTAGATATGTTAAGGGACCTTATGCATATATGTATGTCACGTGCATCCGGATTCTTCCCCTTTATGTTATGAAAGAATGAAATACGATATTTATGTTCGCCATGATATCATGCGGGTCCTTTTCTATTATGTGGTGTTCGGCTACGTGTAACACGTTGTGACCGACCAAGTCAGGCCCAGGGGGTATGTTTACGAGCCCGCCTGGTGGGTCCATGTACACGTACATGGGCCATGTGTGAAGGAGTACCACACACCCAACCCTACCCAGAATAGGAAAGCGCCCAAGGCTATGAAAAGTTTATGAAAAGTTAGGTCCCGCTCATATGTTGCATATGTTTGCATTCCTAACTCCAACAGTGGGGTGACTTATTGAGTATTTCATAAAATACTCAAGCCACGTGCTACCTACATTTTTTAGGTAAAGGCAAGGCGCCAATGTATGGTTAACGGCCGAGATGAGGACACCATGGAAGTTGGAGATGGGATATTTTTTGGAGTTTACTCTTATTGGACTATTTTAAGTTATAACATTAAGTATTGTTTTATTTGAATTTATTTGGAATTAAGTTATTGAAGGTTTTTTTTTTCTTCAGAGTTTAGGTTTCGTTTTGGATTTAGGAATCTTTATGAAACACTCTTCCAACGTTATTTATGATGAGCTTCCGCTTAATGAGTTATGTATGCATGGGTGACGTCACTAATTAGGTTAAAGAAAATTAGGGGCGTTACACCTCATCAGATTGCATTTCGATTTAAAATGAATCACAGAATTAAAGACATTAGAGAAAAACTGAAAGATATTAATGCTTATAAAAATCAATTCCATTTATCTGAGCCTATGTTAAATACTCACATGATGAATGGAGGATGAGTGGAGAGACTTCTTTTATATGTGGTGATGAAATGGTGGGGAAGGGTAGACGTCACCAAATCAATTATAGATCTTCTCCTAAATACAGATCCTATTACCTAGGAGAATATTGTAGTGATTGCCATAGTTAGAACGGGAGGATTTAGGTAAGACGACACTTGCTCAATCAATCTACAATGATGAACGCACCACGAAACGTTTTGAGTTGAAACTATGGGTGTGTATTTCTGAAGAGTTTGATGTAAAGGTTATTGTTGAAAAGATTATGGAGTTTGCAACAAGAAAGAAACCTGAGATTCATCAAATGGATTTGTTGCAAAGTGAACTTCTTAAGCAGAAAAAGTACTTGCTCATCATGGATGATGTGTGGTGAGAATGTTTGCACCCACCCAACCTAAAATTGTGAAAGTTATCTATTTATAATAAAATAAATAACAAAGAAGGGAAAGAGTAATAAATGAAAATAACAATAAATCAAATACATAAGCTATAATAGCCCAAAAAAATATTAATAAATAAATAAAATCATAAATAATGAAAGAAATAGAGAAATAAAAAAAAATATATAAAAAATAATAGTTAAATAATAATAAATAAACAAAAAAAAAACAACCTTTCTCTACTTCTCCCCCATTCACCACCTCTCCTCTTCCCACAATTATCTCTACTCAACCCATCTTTAGGCAAGTAACCGTTACTGCACGAAGAAACAGAAAAACAATTGTTAGATTTACTTGAGAAAAAAAATGAGAATAACTTTTACTCTTATCGGAGATTTGTGTGAAGATAGATATGATCAATAAGTTATATATTAAATCCTTATTTTCTTTTATCTTTTTTTTAGAAATCACAGCTAATTATAGTTAGATCTTCATTAAATTATTACAATAGTTTAGCTTTGAGTCAAACTAAATGTCAATCATTTATACTAGTAAATCACATTAAATTATTAATATTAGATTAAATTTATATAAGTAGCCAAATGAATATCTTAAAAATAGAATGGCCAAACAAATTTGTGACCAGTAAACATTGAGATAAAAAAAGATTTGGAAACAAGGATCTACTAGAAATTTGGAATACATTATAACAAAATTAGAAGGCAACATAGTAAATACCTATAAAAAAAAGGAAGATTCAGGAATTAAAAACCACAAACTAAATAGGAAGAGAAAAGTAAATACAGAGAACAGTAAAGCACATAATAACTTGAAATAACTCTATTACTTTTTTATATCACAGTGACTATGAAAAATAAGATTTTAATAAAAATATAGTAATAGATATATAACATTTCAAGACTTTTAATAATGGACTAATGTAGATTAGAGAAATAATTTTATAGATTTCAAATTTGAAACTGATGTCATGGCTCACATAGGTTGACTTAGATTTCAAATGATAGAATCAAACTTTCATTAAGGATATATTCGTGACAACAACTTAAGCTAACTAGATAAGTGGTCTTACTATCGGCATGGTTATATTTGATGTTGACACGTGCTTGTGGTTCTGCACATGTCATATATGCTGATATGTGTGAATTATCTGTGAATCAGTATGCTTATATTATGTTATAATATGTGAATTGTATGATAATAATTATGGTACGATGTGTTCAAAGATATGTTTGAGATAAGAAACGAGAAGGATGCACTAAATGAAATGTAACGATAGGAGTAAGATATGTTCATGAAACGTTAAGGTTAGGTTACATACTGGAGTGCTATGGATAGAAGAGATTGATGAAATAATATGATTAGGATATGGGTAGAAAGGGATAGGTTTGTGATAGATTGATAGAACGATAGCATTAGGATACGTTCCTATGATGATATAACTAAGGTGCGTTCACGTAATGATATGACTGTGATAAGTATAAGAACGTTAAGACTATGATAAGTTAGGGAATGATATGACCACGAAGTGTTTACGATATGACATGTTTATTGTAATAGCCCAAAAATAAATAAAGGAATAAACTAATAAAAATAATTATAAAAATAGTTAAAATTATAATAACAAAAAAATTAATTGATTAATTAAAAAAATAAAAAAAATAAAAAAATAAAAAATAAACCTTTCCCCATCTCTCTCCACTAACCTCTCATCCCTTCCCACAATTATCTCTCCTCTGCAAAACAAAAAAAAGAAAGAAACAGAAAACCTGCACAAAAAAAAGGAAGAAACAAAAACAACATGGTCAGATTTGAGAAGAAGTAAAATGGCTTTGAACAGATTGCGGATTTAGAGATTTTTGTCAGTTATTACATAAAATTCTATCTCAGATTTCCTTTCCTTCATAGTTATGGTTATAAGAAATTAATTTAGTTATGGTTATAAGAAATTAATTTAGGATCAAATATTCTTTCTATCTTATCTGTAATAATCAGACCCCATGTTCAATTAATTAGATTTTTGTTAACATGATCGGAAGTTAGAGGAAATAAGGTTAGAATCAATAAAATTTTACTTGGCAGATCCATAAATCTGTAAGATAGTAGCCAAATTAAAATTCGCCAATAATATCAGTTTACAGAATGAAAATAAATATAGAATTAGAGTAGTATTTTATTTACAAATGTTTACAAAACTGAGAATCTATTTACAGAATGTTAATGAAAATAATTACCATGAAGAAGGAAGGAAGGAAGATTGAGGGAAGATTTGTTAAATTAAAAATATAACAGGAGATATGAGAGGGCATGAAACTCCATTAAATTCTGTCTAACAGTAAATATCAGAAATTTAACAAGGTAAATTAGAGAAATAATTGTATAGAGTTCAAACTTGAAACTGATGTTATGGGCTCACATAGGTTGACTTGGATTTCAAAGAACGGAATCGAACTTTCAGTAAGGATATATACGTGACAACGACTTAAGCTAGCCAAGTAAGTGACCTTACTATCGGCATGGTTATATTTGATGTTGACACGTGCCCTATGGTTCGGCACGTGTCATATATATTGATATGTGTGAATTGTCTGTGGATCGATATGCTTCCTATATGTTATGTTATGTTATAATATGTGGATTGTATGATAATATTATGGTACGATGTGCTCTAGGAGATATTTGAGATAGGATACGAGAAGGATGCACAAAACGAAATGTAACGATAGGAGTAAGATACGTTCATGAAACGTTGGAGTTAGGTTACATATCGGAGTGCTATGGATAGGAAGGATTGATGAAAGAATACGGTTAGGTTATGGGTAGAAAGGGATAGGTTTGTGATAGATTGATGGAACGATAGCATTAGAGTACGTTCTTGTGACGATATGACTAAGGTACGTCACGTAATGATATGTCTGTGATAGGTATAAGAACATTAAGGCTATGGTAAGTTAGAGAACGATATGACTATGAAGTGTTTACGTTATTGACTTGATTATGATATGATACATTGTATGCTAGATTATGGTGCTTAAGTACGAAATCATGTGAACGTGAATGTATGTTATTTATGCTGCTTAGTTGATGTGATATGAATGCATGTGACGATGTGTGGCCGATTATGGTTTGTTGTATGAGTATTGAAATGTAACTGAATGAATTGTATGACATGAAATACGGTAAATTGCATGATACATAACCCCGCTAGGAATATGTATGATATGTAACGAAATGAGAATGAGAATGACACGTAAGCATGAAAACGTGACACGGGGTTATGTTCATTAAATGATGACTGTAGGACTAGTGGGACCTCATGCATATTGTGTGATCATGCATTTGGGGGGATACCCCTATCCCATCACGAGGGTACGGACGCGTACATCCAAATGGCAGGACAACGATTGTTATGCCCTGCATAGCGCTGCCGTGACGGTTTTAGTCTTAACAGGTCCCGGTGGGCCCCCAGAGCATGCCCACCGGCTAGGGACAGTGGCCCAGCGGTGTGCGAACTAGCTGGTGATCCCATACTTGCACGTATGGGCTGCGTGTAGAGTATATGGTACACATCCACGATTACCTGTTAGGATTACACCGTAGAGAAAACGAAACTAAACGAAATGAAATGAAACGAAACGAAACGAAACGAAAGATAGATCCCATCATTTCATTGCATGTGATTGTTGCATTTAACCCCAATAGTGGGGTCACTTACTGAGTATTTCTTTAAATACTCAAGCCATGTGCTACTACATTTTTCAGGTTAAGGCAAGGCATTCCTGTACGGCTGACGACGGCATCGCAACTCGAGATCATAGCACATGCATAGGATAGTGGCATTTATTTTCTTAGACTTAGGATAGAATAGGATGTTTTAAACTTAAACGTTTATTTATTTTATTTCGAGTCTTTTGTTGTGTCATTTTAAAGATGCTTTCGAAACACGTAAGTCCATGGCTGTATTTTAAGATAAAGGTTATGTTTTATGGAATTTAAATGAAGTCTTCCGCATTCAATGTTTATGGTATGTATACAGTAGCGACCTTAAATTAAGTAGAAAATTTTCGGTCATTACATTTATGATACGATATATTGTGATGTGATGTGATGTATTATGTTTAGATTATTTTGTATGACCATTGAGGTAATTGTTGTAAAAATTGCACGTTATGAAATGACACGTTAAAAGCATAGAGCGTTATGTTATGTTTTCTAAATTTTATGTATACAGCATGTTATGAATGACATGATATCACGATAAATGAAATGAAATGTAACCCCGTTAGGATTATGTATGATACGTAGAGTGAAAAATGAGAAATGACATGTTAAGCATGAAAGATGATAGCGGGGTTATATTCATTAATGATAAAAGTAGAAATATTGGGGATCTCATGCATTATGTGTGCTCATGCATTTAGGGGGATACCCCTATTCCATCACAAGAGTATGGACGCGTACACCCAATGGCAGGGGTACATTCATTATGTTTTGCATAGCGTTGTCGTGACGGTTACTAGTTCTAACAGGTGTCCGACCTAAGGAGCTTCCCAGAGTATGCTCGCCCGACAAGTAAAGTGGCCTAGCGGTGTGCGAACTGACTAGTGAGCCCATTCCCGCACGTATGGGTTGTATGTAGAGTATATGGTACACATCCAAATTACCCATTAGGACAGTACCATAGGAAAATAGATTGAAAGGATAGGTTCCGTCATTGCATTTGCATGTTCTTGCATTTAACCCCAATAGTGGGGTCACTTATTGAGTATTTCTTTAAATGCTTAAGTCATATGCTATTACATTTTTCAGGTTAAGGCAAGGCATTCCTGTACGGCGGACAACGACATCGCAACTCGAGACCATAACACATGCATAGGATAATGGTATTTATTTTCATAGACTTAGGCTAGAATAGGATGTTTTTAACTTAAACGCTTATTTATTTTATTTAGTCTTTTGTTGTGTCGTTTTAAAGATGTTTTCGAAACACGTAAGTCCATGGCTATGTTTTAAGATAAAGATATGTTTTATGGAATTTAAATGATGTCTTCCGCATTCAATGTTTAGGATATGTATACAGAAGCGACCTTAAATTAAATAAAAAATTTCAGGTCGTTACATTGCCTCTAATAAAAGATCAAATATGATATATATGGTAAACTATAGTTTAGTAATAAATATCTTTAACACCCCCCGCAAGCTCAGGGACGGATTCGAACGAACGTGAAGCTTGGATCTGAAAAATTCAAAGAGAGGTCGAGAAACACTTTTTGTGAAGATGTTAGTAGCCTGGTTCGGAGAAGACGTCTAGTTCGTCGACATAGTATTTTCTTGGTTATCGAATACTGCAGAGAGTGATGATGCTGCCTTGCTCCAATGAGAATATGCCTAACCCACGAAGTAGAAGGGGAAACCCAAAGGAAGAAAGAGAATAGAGAGAGAGGGTTTGATGGTGACTATGATGAAGAGAGGAACAAGAGAGGAACAAGAGGGCAGAAACTGAGAATGCGGACTCTAGGTGTATTTTAGACGAAGAAAGAGAGGGGCGTAGATGGAGTGGGGTCTGCGCCCTGTGGACTGGTTTGCTATCAAGCAAATGAGCACGAGTAATAATATCTCGAGCATATTTTAATTGACTAATAAAGATACCATTAGGAGTGGGTGAAGAGCCACAATGATAGATCTGGAGACAGTGATTCTGTTCAGAGCACCACCATTGCCAGGAATAGAGGTCGGCGACGTTACAGTAGGCGGAGCCAGTGGAGAAGTAGTCGATGCCATAGCAAGTGGTGAAGCTCCAATGGACAGAGAGAGAGAGAGAGAGTCACGTCCCCCGGAGCAAGGAACGAAGACGATGTTGAAGTCGGAAGAGTTGCCATAGTGGGCAAACGAGCTGATTTTGGCAAGGAGGCCGGCGGCGACTTGGTTAGCGAAGAGGTCAGTGCAGCACCCGGATTCTGAAGGTAAATTTATGCAAAAGTTCGATGAGCTTTTCAAAATTCCGTTTATTTTTTATGAGAACACTGATGAGGATCCTGAGGTTAGGGTTTTTGTGAAGGATGAAAGGTCGATTGGGAAGAAAATGAGAGAGGTTATGTTGGCTAAGGGGAGACCAATTGTGTTGGAGAAGATGAGGTTGTATGTACAGAGTATGGCGAAGGGTGATTTGGAGGTCAAAGGGTGGAGCCAAAGAGTAATCAATCGGCTCCACTTACGGCAACCATGATGACTGCCCCTACAGCATCAAAGCCAGTAGTGGTAGTGGAGAAGAACAGTAAAGGATTCAAAAGCTATTGAAAAGAAAAAACGAGGGTTGTTAAACCGAAAGGGCTCTGAGAATGTTCGTTTAAACCACCCACCTAAATGGTGTAAAAGTTATCTGTTTATAATGAAATAAATTACAAGGATATGGAAAGAGTAATAAATGAAAATAACAATAAATCAAATACACATATGGTAAGCTTTAATAGAAGACAAATATCTAGATATTTGCCTATAATAAAAGAGCAAATATGATATATATATTAGACTATAATTGAGTACTAAATATCCTTAACATGTGGAATGAAAACGACGAGAAATGGGCTACTCTTAAAAGATTATTGACGGGTGGTGCGTTAGATAGTAGAATTTTGATCACACCACGTCATCAGCCAGTTGCAAAGACTTTTGACACAACTTCATATTATGCTCAAGGAGAATTGGATGACAAAAGTGCTTGGCTATTGTAAAAAAAAAAAAAAAAAAAAAGGCTTTAGGAGGCCAAGAATCATACAAATAACTTGAAAATTCAAATCTAATCAAAATTGGGAAGGAGATTGTGGTTAAAGAGCCTTCCTCCGGCAATAAGAACGATAAGATGTCTTTTGTATGCCAAAAAACCAGAACATCATATTTGGTTGGCTTTCAAAGAAAATGAGCTTTCTCGAATTTGGAGTAAAGATGTAAGGGCCCAAATAAATAAATAAATAAATAAACAAATAAATAAAAATTATTATAAACAAAAAAATTATTATTATGTAAAAAATAATAATAATAATAAATAAGTAAATAAAAAAAATTATTCCCTCATTTATCTCCTCAGATTTGAGAAAACATAAATGTCTCACATCAAATATAGAGGAGAGGGGTTTATAGAGATGATCAAGATTTACATGGAGAGAGATTTAAGATTTTAAGTTATATCTCAAATTTTCTTTTCTTTTATCCAATTATTTAGTTTTATTTAGCAATTGTGCAGAAGCAAATAGAATGGATTAAATTGGCCAGAAGTAATTGCTAACCTAATTGAAAAGGTAACAAACAAAAATAAAATGAAAGGTTTAAACGGATTTAACCTATGAGAATTTTTTCTCTCCTGCAAAAACAAACGTTCAGATTTAGCTTTGCTAGCAGAAGATATTTTGCTAGGAAGAGGTACTGCATTTGAAGATGTTAGTAGTTTTCCTTTTATTTTATTTAATGATATTAAAAGTCATCCTCAAACGCAGAGGGATAATTAAAAGGAAGGAAACATAGTAAGAGACAGGGAGGGAAGATAGTGAATATAATTAAAATTATTTGGAAAATATTAAAGGGTAATAAAAGATTGTGAATATAATTGAAATTATCTTCGAAAATGTTAAAAGGGTATTAACCAAAATAGAATATCTGAAAAATTTTAACGGGTATTAAATGGTTTGTGTGAAAATAATACTGTAACAAATATATATAAATATTTTAAGACCTAACTCAGGCAAAGACTCTAAGAAGTATAACACATGGGTCAACATAAATTAAAGAAACAATTTTGTAGAAATTCAGAGAAACAATTTTGTAGAAATTCAAACTTGAAACTTGTAACGACCCGAGACATCATTTCTGTACGGCTGACGACTGCATCACAACTCTAGACCATGGCACATGAATAGGATAGTAGTATTTATTTTCTTAGACTTGGGCTAGAATAGAATGTTTTTAACTTAAACTCTTGTTCGTTTTATTTAGTCTTTTGTTGTGTCGTTTTAAAGATGTTTTCGAAACACATACATCCATGGCTATGTTTTAAGATAAAGGTTATGTTTTATGGAATTTTAATGAAGGCTTCCGCATTCAATGTTTATGGTACGTATATAGTAGCGACCTTAAATTAAGTAGAAAACTTCGGGTCGTTACAAAACTGATGTCATGGGCTCACATAGGTTGACTTGGATTTCAATGGGCTTTCATTAAGGATAACGATGGAACATCAACCTAAGCTAACCAGGTAAGTGACCTTACTATCAGCATGTTTATATTTGATGTTGACACGTGCCTTGTGGTTCTGCACGTGTCATATATATTGATATGTGTGAATTGTCTGTGGATCGATATGCTTTCTATGTGTTATGTATATGTTATAATATGTGAATTGTATGATAATAATTACGGTACGATGTGTTCAAGGATATGTTTGAGATAGGATACAAGAAGGATGCACAAAACGAAATGTAATGATTGGAGTAAAATACGTTCATGAAACGCTAAGGTTAGATTACATACCGCAGTGATATGGATAAGAGAGATTGATGGAAGAATACAGTTAGGCTACGGGTAGAAAGGGATAGGTTTGTAATAGATTGATAGAACGATAGCGTTAGGTTAAGTTCTTGTGATGAGATGACTAAGGTACGTTCACGTAATGATATGTCTGTGATAGGTATAAGAACGTTAAGGCTATGATAAGTTAGAGAACGATATGACTATGAAGCATTTACGTTATGACTCGTTTATGATATGATACATTGTGATGCAATATGTCATGGTATGATATGTATATAATGAAATGTTATGTTAAAAACATAGAACGTTATGTTAGGTCTCTTAAATTGTGTGTATACAGCATGATATGAATGACATGAAATTACGATAAATGACATGAAGTATAACCCCGTTAGAACTATGTATGATTTGAGAACTGAAGAATGAGAAATGATATGACATGAATGATGAACCATATCTGAAACGATATGAAAAATGATATGATATGTACATAATGCTAGCGGAGTTGTATTAAAGGATAATGAAAATGGAAAAGTTTTGGGACCTCATGCATTATGTATGCTCATGCATTCGGGGGGATACCCCTATCCCATCACGAGGGTACGGACGCGTACATTCAATGGCAGGACAACGATCGTTATGCTTTGCATAGCGCTGCCGTGACGGTTACTAGTTCTAGCGGGTGTCCGGCCTAAGGGGCTCCTAGAGTATGCCCACCGAATAAGGAAAGTGGCCCAGCGGTGTGCAAACTTGCTGGTGTGCCCATATTCGCACGTATGGGTTGTGTGTAGAGTATATGGTACACATCCAAAATTTACCCATTAGGACAGCACCGTAGGAAAAACGGAATGAAAGATAGGTCACATCATCTCATTGCATGTGATTGTTGCATTCAACCCCAATAGTGGAGTCACTTACCGAGTATTTCTTTAAATACTCAAGTCATGTGCTATTACATTTTTCAGGTTAAGGCAAGACATTTCTATACGGCTGACAACGTCATCGTAACTCGAGACCATGGCAGATGCATAGGATAGTGGTATTTATTTTCTTAGACTTAGGCTAGAATATAATGTTTTTAGCTTAAACTCTTATTCATTTTATTTTGTCTTTTGTTGTGTTGTTTTAAAGATGTTTTCAAAATACGTAAATCCATGGCTGTGTTTTAAGATAAAGTTTATGTTTTATGGAATTTTAAATGAAATCTTCCGCATTCAATGTTTATGGTACGTATACAGTAGCGACCTTAAATTAAGTAAAAAAATTTGGGTGTTACAAAAGAGAAGAGACACAATTCAACTAGAGCTCAGTTATAGTCATCTCTAACCTAGTTTGAAGCAATGTTTTTTTATATTGTGCTTTATTTTTCAAAGATTATAATATTCAAAAGGATACACTTATTAAGCAATGGGTGGCACAAGGTTTCGTTTAATCATGTGACATAA

mRNA sequence

ATGAAACATAGGTGTATCAGTCCATCAAATTTTCAATTCGCACTTGAGATTTTGAAGAATACGAATAAATTTGTAATGGTTTTGGATGATGAGCTTGACAAGCTCAAACATACTATTTCAGCCATGAAAGCTGTGCTTCTTGATGCAGAGGAGCCACAGTCCAAGAGCAATGCAGAACATAATTGGATTTCAAGGTTAGAACGGGAGGATTTAGGTAAGACGACACTTGCTCAATCAATCTACAATGATGAACGCACCACGAAACGTTTTGAGTTGAAACTATGGGTGTGTATTTCTGAAGAGTTTGATGTAAAGGTTATTGTTGAAAAGATTATGGAGTTTGCAACAAGAAAGAAACCTGAGATTCATCAAATGGATTTCCAGTTGCAAAGACTTTTGACACAACTTCATATTATGCTCAAGGAGAATTGGATGACAAAAGAGATTGTGGTTAAAGAGCCTTCCTCCGGCAATAAGAACGATAAGATGTCTTTTGTATGCCAAAAAACCAGAACATCATATTTGATTATAATATTCAAAAGGATACACTTATTAAGCAATGGGTGGCACAAGGTTTCGTTTAATCATGTGACATAA

Coding sequence (CDS)

ATGAAACATAGGTGTATCAGTCCATCAAATTTTCAATTCGCACTTGAGATTTTGAAGAATACGAATAAATTTGTAATGGTTTTGGATGATGAGCTTGACAAGCTCAAACATACTATTTCAGCCATGAAAGCTGTGCTTCTTGATGCAGAGGAGCCACAGTCCAAGAGCAATGCAGAACATAATTGGATTTCAAGGTTAGAACGGGAGGATTTAGGTAAGACGACACTTGCTCAATCAATCTACAATGATGAACGCACCACGAAACGTTTTGAGTTGAAACTATGGGTGTGTATTTCTGAAGAGTTTGATGTAAAGGTTATTGTTGAAAAGATTATGGAGTTTGCAACAAGAAAGAAACCTGAGATTCATCAAATGGATTTCCAGTTGCAAAGACTTTTGACACAACTTCATATTATGCTCAAGGAGAATTGGATGACAAAAGAGATTGTGGTTAAAGAGCCTTCCTCCGGCAATAAGAACGATAAGATGTCTTTTGTATGCCAAAAAACCAGAACATCATATTTGATTATAATATTCAAAAGGATACACTTATTAAGCAATGGGTGGCACAAGGTTTCGTTTAATCATGTGACATAA

Protein sequence

MKHRCISPSNFQFALEILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDFQLQRLLTQLHIMLKENWMTKEIVVKEPSSGNKNDKMSFVCQKTRTSYLIIIFKRIHLLSNGWHKVSFNHVT

Homology

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BLAST of CmoCh11G012870 vs. ExPASy Swiss-Prot
Match: Q7XA39 (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=RGA4 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.1e-09
Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 71  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQM-DFQ- 130
           LGKTTLAQ I+NDER TK F  K+WVC+S++FD K +++ I+    R  P +  +  FQ 
Sbjct: 188 LGKTTLAQMIFNDERVTKHFNPKIWVCVSDDFDEKRLIKTIIGNIERSSPHVEDLASFQK 247

Query: 131 -LQRLLTQLHIML 141
            LQ LL     +L
Sbjct: 248 KLQELLNGKRYLL 260

[Close]

BLAST of CmoCh11G012870 vs. ExPASy Swiss-Prot
Match: Q7XBQ9 (Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.7e-09
Identity = 40/117 (34.19%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 56  SNAEH-NWISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEF 115
           S+A+H + +  L    LGKTTLAQ ++ND+R T+ F  K+W+C+SE+FD K +++ I+E 
Sbjct: 170 SDAQHLSVLPILGMGGLGKTTLAQMVFNDQRVTEHFHSKIWICVSEDFDEKRLIKAIVE- 229

Query: 116 ATRKKPEIHQMDF-----QLQRLLTQLHIML---------KENWMTKEIVVKEPSSG 158
           +   +P + +MD      +LQ LL     +L         ++ W     V+K  +SG
Sbjct: 230 SIEGRPLLGEMDLAPLQKKLQELLNGKRYLLVLDDVWNEDQQKWANLRAVLKVGASG 285

[Close]

BLAST of CmoCh11G012870 vs. ExPASy Swiss-Prot
Match: Q7XA40 (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-08
Identity = 36/99 (36.36%), Postives = 55/99 (55.56%), Query Frame = 0


Query: 71  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKK---PEIHQMDF 130
           LGKTTLAQ ++ND+R T+ F LK+WVC+S++FD K +++ I+E    K     ++  +  
Sbjct: 186 LGKTTLAQMVFNDQRITEHFNLKIWVCVSDDFDEKRLIKAIVESIEGKSLGDMDLAPLQK 245

Query: 131 QLQRLLTQLHIML---------KENWMTKEIVVKEPSSG 158
           +LQ LL      L         +E W     V+K  +SG
Sbjct: 246 KLQELLNGKRYFLVLDDVWNEDQEKWDNLRAVLKIGASG 284

[Close]

BLAST of CmoCh11G012870 vs. ExPASy Swiss-Prot
Match: Q7XA42 (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 3.7e-07
Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 71  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKK---PEIHQMDF 130
           LGKTTL+Q ++ND+R T+RF  K+W+CIS++F+ K +++ I+E    K     ++  +  
Sbjct: 186 LGKTTLSQMVFNDQRVTERFYPKIWICISDDFNEKRLIKAIVESIEGKSLSDMDLAPLQK 245

Query: 131 QLQRLLTQLHIML---------KENWMTKEIVVKEPSSGNKNDKMSFVCQKTR 172
           +LQ LL      L         +  W     V+K  +SG      +FV   TR
Sbjct: 246 KLQELLNGKRYFLVLDDVWNEDQHKWANLRAVLKVGASG------AFVLTTTR 292

[Close]

BLAST of CmoCh11G012870 vs. ExPASy Swiss-Prot
Match: Q9LRR4 (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RPPL1 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.4e-05
Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 71  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDFQLQ 130
           +GKTTL+Q +YND+     F  K+W  +SEEFDV  I +K+ E  T +  E   +D    
Sbjct: 207 VGKTTLSQLLYNDQHVRSYFGTKVWAHVSEEFDVFKITKKVYESVTSRPCEFTDLDVLQV 266

Query: 131 RLLTQL 137
           +L  +L
Sbjct: 267 KLKERL 272

[Close]

BLAST of CmoCh11G012870 vs. ExPASy TrEMBL
Match: A0A6J1F3J5 (putative disease resistance protein RGA4 OS=Cucurbita moschata OX=3662 GN=LOC111441853 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.3e-18
Identity = 62/121 (51.24%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 16  EILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTT 75
           E+ K+      + DDE+        A+  +LL+  +P++K N     I+ +    LGKT 
Sbjct: 109 ELRKSRETSSFICDDEVVGRDDDKKAIIDLLLNT-DPKTKENI--TVIAIVGMGGLGKTA 168

Query: 76  LAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDFQLQRLLTQ 135
           LAQS+YNDE TTK FE+KLWVCISEEFDVKVIVEKI+E ATRKKPEI QMD     L  Q
Sbjct: 169 LAQSVYNDESTTKYFEMKLWVCISEEFDVKVIVEKIIESATRKKPEIFQMDLLQSELRKQ 226

Query: 136 L 137
           +
Sbjct: 229 I 226

[Close]

BLAST of CmoCh11G012870 vs. ExPASy TrEMBL
Match: A0A6J1EUW9 (putative disease resistance protein RGA1 OS=Cucurbita moschata OX=3662 GN=LOC111437812 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.9e-15
Identity = 56/129 (43.41%), Postives = 77/129 (59.69%), Query Frame = 0


Query: 21  TNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLERED---------- 80
           + + +   DDEL K + TIS +    +    P  K+  +    + L+ ++          
Sbjct: 143 SERVINTRDDELRKSRETISFICDDEVVGRNPDKKAIIDLLLNTDLDTKENIGVIAIVGM 202

Query: 81  --LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDFQ 138
             LGKT LAQS+YN+E  TK F+LKLWVC+SE+FD+KVIVEKI+E ATRKKPEI QMD  
Sbjct: 203 GGLGKTALAQSVYNNENITKHFDLKLWVCVSEDFDIKVIVEKIIESATRKKPEILQMDSL 262

[Close]

BLAST of CmoCh11G012870 vs. ExPASy TrEMBL
Match: A0A6J1EUW9 (putative disease resistance protein RGA1 OS=Cucurbita moschata OX=3662 GN=LOC111437812 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-04
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 30 DELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLE 68
          DELDKLKHTI  M+AVLLDAEE QS S+A  NWISR++
Sbjct: 33 DELDKLKHTILTMEAVLLDAEEQQSNSHAVKNWISRVK 70

HSP 2 Score: 89.4 bits (220), Expect = 1.9e-14
Identity = 58/156 (37.18%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 16  EILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTT 75
           E+ +    + ++ DDE+   +    A+  +LLD      ++ A    I+ +    LGKT 
Sbjct: 109 ELRETRETYSIIHDDEVVGREDDKKAIMDLLLDTNIEAKENIAT---IAIVGMGGLGKTA 168

Query: 76  LAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDFQLQRLLTQ 135
           LAQS+YNDE TTK F LKLWVCISE+FDV VIV+KI+E AT KKPEI Q++F    L   
Sbjct: 169 LAQSVYNDENTTKHFMLKLWVCISEQFDVNVIVQKIIESATGKKPEILQIEFLQSELRKH 228

Query: 136 L----HIMLK--------ENWMTKEIVVKEPSSGNK 160
           +    ++++         E W+  + ++K+ + G++
Sbjct: 229 IDGKKYLLIMDDVWNENYEKWVKLKTLLKDGAKGSR 261

[Close]

BLAST of CmoCh11G012870 vs. ExPASy TrEMBL
Match: A0A6J1DHP6 (putative disease resistance protein RGA3 OS=Momordica charantia OX=3673 GN=LOC111021005 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 9.4e-14
Identity = 57/140 (40.71%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 44  AVLLDAEEPQSKSNAEHNWISRLE------------------------------RED--- 103
           A +LDAEE QSKS+A  NW+SRL+                              ++D   
Sbjct: 4   AAVLDAEEQQSKSHALKNWVSRLKDALYDADDLIDEFSYETLRTQVNAKGGRKTKQDTNF 63

Query: 104 --------------LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFAT 137
                         LGKTTLAQSIYND   TK FELKLW+C+ E+FDVK+I EKI+E AT
Sbjct: 64  EENIGVIAIAGIGGLGKTTLAQSIYNDVMITKHFELKLWMCVYEDFDVKIIAEKILESAT 123

[Close]

BLAST of CmoCh11G012870 vs. ExPASy TrEMBL
Match: A0A6A6KZI4 (NB-ARC domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_001010 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-13
Identity = 59/148 (39.86%), Postives = 86/148 (58.11%), Query Frame = 0


Query: 11  FQFALEILKNTNKFVMV-------LDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNW- 70
           F  A EI K      ++       L+D+L+KLK+T+S ++AVLL++   Q  +  E N  
Sbjct: 7   FNIANEIFKKLESQALIEIGRWWNLEDDLEKLKNTVSTIQAVLLESTS-QGLAPKEKNLS 66

Query: 71  -ISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPE 130
            IS +    LGKTTLAQ +YNDER    FELK WVC+SE FDVK+I+EKI++    ++P+
Sbjct: 67  VISIVGIGGLGKTTLAQIVYNDERVKTYFELKGWVCVSENFDVKLIIEKILDSMIGQRPD 126

Query: 131 IHQMDFQLQRLLTQLH-----IMLKENW 145
              +D    +L   ++     I+L E W
Sbjct: 127 NLGVDALKNKLHADINGKKYIIVLDEVW 153

[Close]

BLAST of CmoCh11G012870 vs. NCBI nr
Match: XP_022934779.1 (putative disease resistance protein RGA4 [Cucurbita moschata])

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-17
Identity = 62/121 (51.24%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 16  EILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTT 75
           E+ K+      + DDE+        A+  +LL+  +P++K N     I+ +    LGKT 
Sbjct: 109 ELRKSRETSSFICDDEVVGRDDDKKAIIDLLLNT-DPKTKENI--TVIAIVGMGGLGKTA 168

Query: 76  LAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDFQLQRLLTQ 135
           LAQS+YNDE TTK FE+KLWVCISEEFDVKVIVEKI+E ATRKKPEI QMD     L  Q
Sbjct: 169 LAQSVYNDESTTKYFEMKLWVCISEEFDVKVIVEKIIESATRKKPEIFQMDLLQSELRKQ 226

Query: 136 L 137
           +
Sbjct: 229 I 226

[Close]

BLAST of CmoCh11G012870 vs. NCBI nr
Match: XP_023530018.1 (disease resistance protein RGA2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 98.6 bits (244), Expect = 6.4e-17
Identity = 59/125 (47.20%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 25  VMVLDDELDKLKHTISAMKAVLLDAEEPQSKS----------NAEHN--WISRLEREDLG 84
           ++  DDEL K + TIS +    +   +P  K+          N + N   I+ +    LG
Sbjct: 29  IITRDDELRKSRETISFICDDEVVGRDPDKKAIIDLLLNTDLNTKENIGMIAIVGMGGLG 88

Query: 85  KTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDFQLQRL 138
           KTTLAQ++YN+E  TK F+LKLWVC+SE+FD+KVIVEKI+EFATRKKPEI QMD     L
Sbjct: 89  KTTLAQTVYNNENITKHFDLKLWVCVSEDFDIKVIVEKIIEFATRKKPEILQMDSLQSDL 148

[Close]

BLAST of CmoCh11G012870 vs. NCBI nr
Match: XP_023547024.1 (disease resistance protein RGA2-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023547025.1 disease resistance protein RGA2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-15
Identity = 77/230 (33.48%), Postives = 89/230 (38.70%), Query Frame = 0


Query: 28  LDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLE-------------------- 87
           +DDELD+LKHT+SAM+AVLLDAEE QSKS+A  NWISR++                    
Sbjct: 1   MDDELDQLKHTLSAMEAVLLDAEEQQSKSHAVKNWISRVKEAFYDVDDLIDEFAYETLRR 60

Query: 88  ------------------------------------------------------------ 127
                                                                       
Sbjct: 61  QVITKGKRGAKEVREVFSIPHQVAFRFEMSHKIKDIKEKLKAIDVDKSQFHFSERMINIR 120

[Close]

BLAST of CmoCh11G012870 vs. NCBI nr
Match: XP_023539563.1 (uncharacterized protein LOC111800203 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-15
Identity = 58/111 (52.25%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 16  EILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTT 75
           E+ K       + DDE+    H   A+  +LL+  +P  K N     I+ +    LGKTT
Sbjct: 153 ELRKRRETSSFICDDEVVGRDHDKKAIIDLLLNT-DPNVKENVA--VIAIVGMGGLGKTT 212

Query: 76  LAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMD 127
           LAQ +YN+E   K FELKLWVCIS+EFDVKVIVEKI+E ATRKKPEI QMD
Sbjct: 213 LAQFVYNNEDIKKHFELKLWVCISDEFDVKVIVEKILESATRKKPEILQMD 260

[Close]

BLAST of CmoCh11G012870 vs. NCBI nr
Match: XP_023547023.1 (disease resistance protein RGA2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-15
Identity = 77/230 (33.48%), Postives = 89/230 (38.70%), Query Frame = 0


Query: 28  LDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLE-------------------- 87
           +DDELD+LKHT+SAM+AVLLDAEE QSKS+A  NWISR++                    
Sbjct: 42  MDDELDQLKHTLSAMEAVLLDAEEQQSKSHAVKNWISRVKEAFYDVDDLIDEFAYETLRR 101

Query: 88  ------------------------------------------------------------ 127
                                                                       
Sbjct: 102 QVITKGKRGAKEVREVFSIPHQVAFRFEMSHKIKDIKEKLKAIDVDKSQFHFSERMINIR 161

[Close]

BLAST of CmoCh11G012870 vs. TAIR 10
Match: AT3G14470.1 (NB-ARC domain-containing disease resistance protein )

HSP 1 Score: 50.1 bits (118), Expect = 2.4e-06
Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 71  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDFQLQ 130
           +GKTTL+Q +YND+     F  K+W  +SEEFDV  I +K+ E  T +  E   +D    
Sbjct: 207 VGKTTLSQLLYNDQHVRSYFGTKVWAHVSEEFDVFKITKKVYESVTSRPCEFTDLDVLQV 266

Query: 131 RLLTQL 137
           +L  +L
Sbjct: 267 KLKERL 272

[Close]

BLAST of CmoCh11G012870 vs. TAIR 10
Match: AT1G58390.1 (Disease resistance protein (CC-NBS-LRR class) family )

HSP 1 Score: 48.1 bits (113), Expect = 9.3e-06
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 71  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFAT--RKKPEIHQMD 127
           LGKTTLA+ ++N E    +F+   WVC+S+EF  K + + I++  T   KK EI QM+
Sbjct: 194 LGKTTLARQVFNHEDVKHQFDRLAWVCVSQEFTRKNVWQMILQNLTSREKKDEILQME 251

[Close]

BLAST of CmoCh11G012870 vs. TAIR 10
Match: AT1G58602.1 (LRR and NB-ARC domains-containing disease resistance protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.6e-05
Identity = 30/91 (32.97%), Postives = 49/91 (53.85%), Query Frame = 0


Query: 71  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIM--------EFATRKKPEI 130
           LGKTTLA+ ++N +  TK+F+   WV +S++F +K + + I+        E    +K  +
Sbjct: 193 LGKTTLARQVFNHDMVTKKFDKLAWVSVSQDFTLKNVWQNILGDLKPKEEETKEEEKKIL 252

Query: 131 HQMDFQLQRLLTQLHIMLKENWMTKEIVVKE 154
              ++ LQR L QL  M K   +  +I  KE
Sbjct: 253 EMTEYTLQRELYQLLEMSKSLIVLDDIWKKE 283

[Close]

BLAST of CmoCh11G012870 vs. TAIR 10
Match: AT1G58602.2 (LRR and NB-ARC domains-containing disease resistance protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.6e-05
Identity = 30/91 (32.97%), Postives = 49/91 (53.85%), Query Frame = 0


Query: 71  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIM--------EFATRKKPEI 130
           LGKTTLA+ ++N +  TK+F+   WV +S++F +K + + I+        E    +K  +
Sbjct: 193 LGKTTLARQVFNHDMVTKKFDKLAWVSVSQDFTLKNVWQNILGDLKPKEEETKEEEKKIL 252

Query: 131 HQMDFQLQRLLTQLHIMLKENWMTKEIVVKE 154
              ++ LQR L QL  M K   +  +I  KE
Sbjct: 253 EMTEYTLQRELYQLLEMSKSLIVLDDIWKKE 283

[Close]

BLAST of CmoCh11G012870 vs. TAIR 10
Match: AT1G58400.1 (Disease resistance protein (CC-NBS-LRR class) family )

HSP 1 Score: 46.6 bits (109), Expect = 2.7e-05
Identity = 24/58 (41.38%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 71  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRK--KPEIHQMD 127
           LGKTTLA+ ++N E    +F+   WVC+S+EF  K + + I++  T +  K EI QM+
Sbjct: 195 LGKTTLARQVFNHEDVKHQFDRLAWVCVSQEFTRKNVWQMILQNLTSRETKDEILQME 252

The following BLAST results are available for this feature:

BLAST of CmoCh11G012870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XA39	5.1e-09	46.58	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q7XBQ9	6.7e-09	34.19	Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 ...	[more]
Q7XA40	1.9e-08	36.36	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q7XA42	3.7e-07	32.74	Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=R...	[more]
Q9LRR4	3.4e-05	39.39	Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of CmoCh11G012870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3J5	6.3e-18	51.24	putative disease resistance protein RGA4 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1EUW9	2.9e-15	43.41	putative disease resistance protein RGA1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1EUW9	1.8e-04	73.68	putative disease resistance protein RGA1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1DHP6	9.4e-14	40.71	putative disease resistance protein RGA3 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6A6KZI4	2.1e-13	39.86	NB-ARC domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_001010 P...	[more]

BLAST of CmoCh11G012870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934779.1	1.3e-17	51.24	putative disease resistance protein RGA4 [Cucurbita moschata]	[more]
XP_023530018.1	6.4e-17	47.20	disease resistance protein RGA2-like [Cucurbita pepo subsp. pepo]	[more]
XP_023547024.1	1.2e-15	33.48	disease resistance protein RGA2-like isoform X2 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_023539563.1	1.2e-15	52.25	uncharacterized protein LOC111800203 [Cucurbita pepo subsp. pepo]	[more]
XP_023547023.1	1.2e-15	33.48	disease resistance protein RGA2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh11G012870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14470.1	2.4e-06	39.39	NB-ARC domain-containing disease resistance protein	[more]
AT1G58390.1	9.3e-06	43.10	Disease resistance protein (CC-NBS-LRR class) family	[more]
AT1G58602.1	1.6e-05	32.97	LRR and NB-ARC domains-containing disease resistance protein	[more]
AT1G58602.2	1.6e-05	32.97	LRR and NB-ARC domains-containing disease resistance protein	[more]
AT1G58400.1	2.7e-05	41.38	Disease resistance protein (CC-NBS-LRR class) family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 53..178 e-value: 4.8E-11 score: 44.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 71..134
IPR041118	Rx, N-terminal	PFAM	PF18052	Rx_N	coord: 16..67 e-value: 9.9E-7 score: 29.0
IPR002182	NB-ARC	PFAM	PF00931	NB-ARC	coord: 69..142 e-value: 2.5E-9 score: 36.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G012870.1	CmoCh11G012870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0043531	ADP binding