CmoCh11G012010 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G012010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Phytocyanin domain-containing protein
Location	Cmo_Chr11: 7078071 .. 7079794 (+)
RNA-Seq Expression	CmoCh11G012010
Synteny	CmoCh11G012010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCTCAACTTTTGGACCCAAATTGTTAAACTTTGATTTCCCCCCCAAAAAAATAAAGTAAAAGCTGAGGTGTAATAATTTGTATCGAATTGAAAAAAATAATGGCGGTCAGTAGATCCATTAAGCAAGCTCTTAATTAATCTTCATAATCACTAATCCCCTTCCCACCCATTTAAATAAAACCTCGAACCAGACCCTTCTAGACTACGCTAAAAATACAGAGCTATGGAGGTTCTAAGAAGGGGCAGCGGCGGTGGGCTGTTGGCGGCGGTGGTGCTGCTGCTGCTGGCGGCGGCGGTGTCGGAAGTTTCAGCTAAACGGTGGACTGTTGGTGACAACATGGGGTGGACGTCCAATGTGAACTACACTGTCTGGGCTGAAGGGAAGCACTTCTACTATGACGACTGGCTCTGTAAGCACTTTTATCTTTAGATCTGTTAATGGTGTTTGGATTTGTAGCTGATAATTTGGATTTTGGTTAGTTTTGAGGAGAGATTTTGTGGGTTTTTGTCGGATTTTGATATTCTTGATTCTGTTTGGTTGCTGAGAAAATTGGTGTAAGAAGTAGGAAAATGAAATTGGTTCTTGATGTTCTTGGTTCTGCCTTTTGAATTTCTGTGTTTGATTGTTCTTGTCCCTTAGCTTGAGATATGGACTAGGTTTTAGAATCTGGATTTGATGCAAATCAACACGGGTTCTTTCAACATGTTTTGTTCTCGGTTATCGAATCATTTAGAGAAATCTGCTAAGATTTGGTTTGTTACTAGCAAATGAGCTGAAAAGAAAGTTCCAACTCGCATAATCTCTCGGTCGCTCTTGTTTTGATGTAATGTCGGTTCATCCATGTATCCCTTTGCACGTGCACGTATGTACATTACATTGTAACGATCTATCAAGTATTATATGAGAAAAACTCTCGAAGATTGAACGTATTGGGTCGAAATATGGTTAGTTACTCGAACTAGTTCGACGAGGATGTCGGGATTATAGCTAATTTGGTCTTTGTTGTTAGTTTTTGTGTACGACAGGAACCAAATGGATGTGTTGGAGGTGAACAAGACAAACTACGAGGCTTGCAATTCTGAGAATCCACTAAAAAACTTCACCACAGGAGCTGGAAGAGATGTTGTTCATTTGAATGTAACAAGACCTTATTACTTCATAAGTGGCAAAGGGTTTTGCTATGGAGGCATGAAGCTCGCTATCAATGTCGAGCACCTACCGCCCCCGCCCTCGAGCTCACCCTTGAATGAGAAGAGCAGTGCTCCAAGATCAACCCACATGGGCCACATCCCGTTCGTTTTAACCGCTGTTTTTGCAGCTGCTCGGGCCTTGATATGGTAAACCACCGGTGTTGTTGATTGATATTGAAACAGAGGAGATCTTGCTTCACCAATTTGTGCAAGGAAGATGTAGTTAGTTATTGGATCCAGTTTCTTTGTGTTATGTTGTTGATTTAAAAATTTGTTGTTGTTGTTGTTGATGATGATGATGTTCTTGGTGTTCTTGATGGGTGGTGGGTATTAAACTCATAGGGGTTGAGATTTGATAATACTCATAATTTATTTTGGCCATTGAAAATGGGTTTGGTTGCAGCAAGGGGCAAGCCACCACCACCAACCATGTGAGTATAGATTCTTCTGTCTCTTTTATATTCATTGAATGAATAGATTGCTAATTTGGAAAAGAAAGCAATGTTTGTTGACTGGCTCCACAATCCAGC

mRNA sequence

AAATCTCAACTTTTGGACCCAAATTGTTAAACTTTGATTTCCCCCCCAAAAAAATAAAGTAAAAGCTGAGGTGTAATAATTTGTATCGAATTGAAAAAAATAATGGCGGTCAGTAGATCCATTAAGCAAGCTCTTAATTAATCTTCATAATCACTAATCCCCTTCCCACCCATTTAAATAAAACCTCGAACCAGACCCTTCTAGACTACGCTAAAAATACAGAGCTATGGAGGTTCTAAGAAGGGGCAGCGGCGGTGGGCTGTTGGCGGCGGTGGTGCTGCTGCTGCTGGCGGCGGCGGTGTCGGAAGTTTCAGCTAAACGGTGGACTGTTGGTGACAACATGGGGTGGACGTCCAATGTGAACTACACTGTCTGGGCTGAAGGGAAGCACTTCTACTATGACGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGGATGTGTTGGAGGTGAACAAGACAAACTACGAGGCTTGCAATTCTGAGAATCCACTAAAAAACTTCACCACAGGAGCTGGAAGAGATGTTGTTCATTTGAATGTAACAAGACCTTATTACTTCATAAGTGGCAAAGGGTTTTGCTATGGAGGCATGAAGCTCGCTATCAATGTCGAGCACCTACCGCCCCCGCCCTCGAGCTCACCCTTGAATGAGAAGAGCAGTGCTCCAAGATCAACCCACATGGGCCACATCCCGTTCGTTTTAACCGCTGTTTTTGCAGCTGCTCGGGCCTTGATATGGTAAACCACCGGTGTTGTTGATTGATATTGAAACAGAGGAGATCTTGCTTCACCAATTTGTGCAAGGAAGATGTAGTTAGTTATTGGATCCAGTTTCTTTGTGTTATGTTGTTGATTTAAAAATTTGTTGTTGTTGTTGTTGATGATGATGATGTTCTTGGTGTTCTTGATGGGTGGTGGGTATTAAACTCATAGGGGTTGAGATTTGATAATACTCATAATTTATTTTGGCCATTGAAAATGGGTTTGGTTGCAGCAAGGGGCAAGCCACCACCACCAACCATGTGAGTATAGATTCTTCTGTCTCTTTTATATTCATTGAATGAATAGATTGCTAATTTGGAAAAGAAAGCAATGTTTGTTGACTGGCTCCACAATCCAGC

Coding sequence (CDS)

ATGGAGGTTCTAAGAAGGGGCAGCGGCGGTGGGCTGTTGGCGGCGGTGGTGCTGCTGCTGCTGGCGGCGGCGGTGTCGGAAGTTTCAGCTAAACGGTGGACTGTTGGTGACAACATGGGGTGGACGTCCAATGTGAACTACACTGTCTGGGCTGAAGGGAAGCACTTCTACTATGACGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGGATGTGTTGGAGGTGAACAAGACAAACTACGAGGCTTGCAATTCTGAGAATCCACTAAAAAACTTCACCACAGGAGCTGGAAGAGATGTTGTTCATTTGAATGTAACAAGACCTTATTACTTCATAAGTGGCAAAGGGTTTTGCTATGGAGGCATGAAGCTCGCTATCAATGTCGAGCACCTACCGCCCCCGCCCTCGAGCTCACCCTTGAATGAGAAGAGCAGTGCTCCAAGATCAACCCACATGGGCCACATCCCGTTCGTTTTAACCGCTGTTTTTGCAGCTGCTCGGGCCTTGATATGGTAA

Protein sequence

MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDDWLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAARALIW

Homology

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BLAST of CmoCh11G012010 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 9.5e-44
Identity = 84/154 (54.55%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 12  LLAAVVL-LLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDDWLFFVYDRNQ 71
           L+ AVVL  L+AA +  V+AK++TVG+N  W  N+NYT+WA+GKHFY  DWL+FV+DRNQ
Sbjct: 7   LITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQ 66

Query: 72  MDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAINVE 131
            ++LEVNKT+YE C +++P++N+T GAGRD+V LN T+ YY + GKG CYGGMKL++ VE
Sbjct: 67  HNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVE 126

Query: 132 HLPPPPSSSPLNEKSSAPRSTHMGH--IPFVLTA 163
            LPPPP S+P+    S    T +    IP  L A
Sbjct: 127 KLPPPPKSAPVKNIGSVSMVTGLAQFMIPVSLFA 160

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BLAST of CmoCh11G012010 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 9.3e-15
Identity = 60/146 (41.10%), Postives = 75/146 (51.37%), Query Frame = 0


Query: 11  GLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDDWLFFVYDRNQ 70
           G   A  LLL  AAV  V A  + VGD  GWTSN++YTVW  GK F   D L FVY  + 
Sbjct: 2   GSTVAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLSH 61

Query: 71  MDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGK-GFCYGGMKLAINV 130
             V  V+K  Y+ C+S    +NF  G  +  + L      +F+    G C  GMKLA+ V
Sbjct: 62  -SVSVVDKAGYDNCDSSGATQNFADGDTK--IDLTTVGTMHFLCPTFGHCKNGMKLAVPV 121

Query: 131 EHLPPPPS--SSPLNEKS--SAPRST 152
               P PS  SSP +  S  S+P ST
Sbjct: 122 LAAAPSPSTPSSPPSTPSTPSSPPST 144

[Close]

BLAST of CmoCh11G012010 vs. ExPASy Swiss-Prot
Match: Q9T076 (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-12
Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 0


Query: 17  VLLLLAAAVSEVSAKRWTVGDNMGWTSN--VNYTVWAEGKHFYYDDWLFFVYDRNQMDVL 76
           +LL L+   +  +A+++ VG +  W +N   NY  W+    F   D L+F Y +    VL
Sbjct: 15  ILLSLSTLFTISNARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVL 74

Query: 77  EVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLAINV---- 136
           EVNK +Y+ACN++NP+K    G     + L+   P+YFISG +  C  G KL + V    
Sbjct: 75  EVNKADYDACNTKNPIKRVDDGDSE--ISLDRYGPFYFISGNEDNCKKGQKLNVVVISAR 134

Query: 137 -------EHLPPPPSSSP 141
                   H   P SS+P
Sbjct: 135 IPSTAQSPHAAAPGSSTP 150

[Close]

BLAST of CmoCh11G012010 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 5.6e-12
Identity = 50/136 (36.76%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 15  AVVLLLLAAAVSEVSAKRWTVGDNMG-W----TSNVNYTVWAEGKHFYYDDWLFFVYDRN 74
           +++ L   AA +EV     TVG   G W    +S+ ++T WA+   F   D++ F Y+  
Sbjct: 18  SLIFLFSLAAANEV-----TVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESG 77

Query: 75  QMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLA-- 134
           +  VLEV K  Y +CN+ NPL N+T G  +  V L+ + P+YFISG  G C  G KL+  
Sbjct: 78  KDSVLEVTKEAYNSCNTTNPLANYTDGETK--VKLDRSGPFYFISGANGHCEKGQKLSLV 137

Query: 135 -INVEHLPPPPSSSPL 142
            I+  H    P+ SP+
Sbjct: 138 VISPRHSVISPAPSPV 146

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BLAST of CmoCh11G012010 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-10
Identity = 49/143 (34.27%), Postives = 70/143 (48.95%), Query Frame = 0


Query: 15  AVVLLLLAAAVSEV---SAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDDWLFFVYDRNQM 74
           A+VL  L A ++      A  +TVGD  GW    +Y+ WA  K F   D L F Y     
Sbjct: 6   ALVLCFLLAIINMALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAH 65

Query: 75  DVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLAINVE 134
            V EV +++Y++C S N +   +TGA    + L     +YFI G  G   GGMKL+I V+
Sbjct: 66  TVDEVKESDYKSCTSGNSISTDSTGA--TTIPLKKAGKHYFICGVPGHSTGGMKLSIKVK 125

Query: 135 ---HLPPPPSSSPLNEKSSAPRS 151
                   PS++P +    +P S
Sbjct: 126 ASSGSSAAPSATPSSSGKGSPSS 146

[Close]

BLAST of CmoCh11G012010 vs. ExPASy TrEMBL
Match: A0A6J1F095 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111441162 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 9.4e-95
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD 60
           MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD
Sbjct: 1   MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD 60

Query: 61  WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 61  WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120

Query: 121 GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAARALIW 173
           GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAARALIW
Sbjct: 121 GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAARALIW 172

[Close]

BLAST of CmoCh11G012010 vs. ExPASy TrEMBL
Match: A0A6J1HY39 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469068 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.8e-90
Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD 60
           MEVLRR SGGGLLAA VLLLLAAAVSEVSAKRWTVGDNMGWT+NVNYTVWAEGKHFYYDD
Sbjct: 1   MEVLRRVSGGGLLAA-VLLLLAAAVSEVSAKRWTVGDNMGWTTNVNYTVWAEGKHFYYDD 60

Query: 61  WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 61  WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120

Query: 121 GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAARALIW 173
           GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTH+GH PFVLTAVFAAARALIW
Sbjct: 121 GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHIGHTPFVLTAVFAAARALIW 171

[Close]

BLAST of CmoCh11G012010 vs. ExPASy TrEMBL
Match: A0A0A0LC11 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824220 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.5e-71
Identity = 138/172 (80.23%), Postives = 150/172 (87.21%), Query Frame = 0


Query: 1   MEVLR-RGSGGGLLAAV-VLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYY 60
           MEVLR R  G GLL AV  +++L AAV EVSA RWTVG NMGW +NVNYT WA+GKHFYY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAVVILLAAVPEVSATRWTVGGNMGWNTNVNYTTWAQGKHFYY 60

Query: 61  DDWLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGF 120
           DDWLFFVYDRNQM+VLEVNKT+YE C S++PL NFTTGAGRDVVHLNVTRPYYFISGKGF
Sbjct: 61  DDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120

Query: 121 CYGGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAARAL 171
           C+GGMKLAI+VEHLPPPPSSSPLNEKSSA RST+ GH PFVLTAVFA A  L
Sbjct: 121 CFGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTNTGHTPFVLTAVFAIAAVL 172

[Close]

BLAST of CmoCh11G012010 vs. ExPASy TrEMBL
Match: A0A5D3DPZ3 (Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007610 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 8.0e-70
Identity = 134/170 (78.82%), Postives = 149/170 (87.65%), Query Frame = 0


Query: 1   MEVLR-RGSGGGLLAAV--VLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFY 60
           MEVLR R  G GLL AV   +++L A+V EVSA RWTVG NMGWT+NVNY+ WA+GKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQM+VLEVNKT+YE C S++PL NFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAA 168
           FCYGGMKLAI+VEHLPPPPS+ P+NEKSSA RST+ GH PFVLTAVFA A
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIA 170

[Close]

BLAST of CmoCh11G012010 vs. ExPASy TrEMBL
Match: A0A1S3B7D2 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486966 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 8.0e-70
Identity = 134/170 (78.82%), Postives = 149/170 (87.65%), Query Frame = 0


Query: 1   MEVLR-RGSGGGLLAAV--VLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFY 60
           MEVLR R  G GLL AV   +++L A+V EVSA RWTVG NMGWT+NVNY+ WA+GKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQM+VLEVNKT+YE C S++PL NFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAA 168
           FCYGGMKLAI+VEHLPPPPS+ P+NEKSSA RST+ GH PFVLTAVFA A
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIA 170

[Close]

BLAST of CmoCh11G012010 vs. NCBI nr
Match: XP_022933881.1 (lamin-like protein [Cucurbita moschata] >KAG6588503.1 Lamin-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355.9 bits (912), Expect = 1.9e-94
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD 60
           MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD
Sbjct: 1   MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD 60

Query: 61  WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 61  WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120

Query: 121 GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAARALIW 173
           GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAARALIW
Sbjct: 121 GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAARALIW 172

[Close]

BLAST of CmoCh11G012010 vs. NCBI nr
Match: XP_023530287.1 (lamin-like protein [Cucurbita pepo subsp. pepo] >XP_023530288.1 lamin-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.0 bits (881), Expect = 7.6e-91
Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD 60
           MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD
Sbjct: 1   MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD 60

Query: 61  WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 61  WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120

Query: 121 GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAARALIW 173
           GGMKLAINVEHLPPPPSSSPLNEKSSA RSTH+ + PFVLTAVFAAARALIW
Sbjct: 121 GGMKLAINVEHLPPPPSSSPLNEKSSASRSTHIRYTPFVLTAVFAAARALIW 172

[Close]

BLAST of CmoCh11G012010 vs. NCBI nr
Match: XP_022970072.1 (lamin-like protein [Cucurbita maxima])

HSP 1 Score: 341.7 bits (875), Expect = 3.8e-90
Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD 60
           MEVLRR SGGGLLAA VLLLLAAAVSEVSAKRWTVGDNMGWT+NVNYTVWAEGKHFYYDD
Sbjct: 1   MEVLRRVSGGGLLAA-VLLLLAAAVSEVSAKRWTVGDNMGWTTNVNYTVWAEGKHFYYDD 60

Query: 61  WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 61  WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120

Query: 121 GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAARALIW 173
           GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTH+GH PFVLTAVFAAARALIW
Sbjct: 121 GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHIGHTPFVLTAVFAAARALIW 171

[Close]

BLAST of CmoCh11G012010 vs. NCBI nr
Match: XP_038903389.1 (lamin-like protein [Benincasa hispida])

HSP 1 Score: 287.7 bits (735), Expect = 6.5e-74
Identity = 136/165 (82.42%), Postives = 150/165 (90.91%), Query Frame = 0


Query: 1   MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD 60
           MEVLRR  GGGLL AV +++L AAV EVSA RWTVG NMGWT+NVNYT+WA+ KHFYYDD
Sbjct: 1   MEVLRRVDGGGLLVAVAVVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQDKHFYYDD 60

Query: 61  WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQM+VLEVNKT+YE C S++PL NFTTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 61  WLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120

Query: 121 GGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFA 166
           GGMKLAI+VEHLPPPPSSSPLNEKSSA RST++ H PF+LTAVFA
Sbjct: 121 GGMKLAIHVEHLPPPPSSSPLNEKSSALRSTYISHTPFILTAVFA 165

[Close]

BLAST of CmoCh11G012010 vs. NCBI nr
Match: KAG7022334.1 (Lamin-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.4 bits (729), Expect = 3.2e-73
Identity = 136/140 (97.14%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD 60
           MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD
Sbjct: 1   MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDD 60

Query: 61  WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 61  WLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120

Query: 121 GGMKLAINVEHLPPPPSSSP 141
           GGMKLAINVEHLPP P + P
Sbjct: 121 GGMKLAINVEHLPPRPRAHP 140

[Close]

BLAST of CmoCh11G012010 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 )

HSP 1 Score: 182.2 bits (461), Expect = 3.6e-46
Identity = 92/159 (57.86%), Postives = 117/159 (73.58%), Query Frame = 0


Query: 12  LLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDDWLFFVYDRNQM 71
           L+A  VL  L AA + V+AKRWTVGDN  W  N+NYT+WA+ KHFY DDWL+FVY+RNQ 
Sbjct: 7   LVAGAVLAFLLAA-TNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVYERNQY 66

Query: 72  DVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGK-GFCYGGMKLAINVE 131
           +V+EVN+TNY +CN  NP+ N++ GAGRD+VHLNVTR YY ISG  G CYGGMKLA+ VE
Sbjct: 67  NVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAVLVE 126

Query: 132 HLPPPPSSSPLNEKSSAPRSTHMGHIPF---VLTAVFAA 167
             PPPP+++P   K+SA R+  +    +   +  AVFAA
Sbjct: 127 KPPPPPAAAP--NKNSARRTFSVSGFAYQFLIPVAVFAA 162

[Close]

BLAST of CmoCh11G012010 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 177.9 bits (450), Expect = 6.7e-45
Identity = 84/154 (54.55%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 12  LLAAVVL-LLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDDWLFFVYDRNQ 71
           L+ AVVL  L+AA +  V+AK++TVG+N  W  N+NYT+WA+GKHFY  DWL+FV+DRNQ
Sbjct: 7   LITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQ 66

Query: 72  MDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAINVE 131
            ++LEVNKT+YE C +++P++N+T GAGRD+V LN T+ YY + GKG CYGGMKL++ VE
Sbjct: 67  HNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVE 126

Query: 132 HLPPPPSSSPLNEKSSAPRSTHMGH--IPFVLTA 163
            LPPPP S+P+    S    T +    IP  L A
Sbjct: 127 KLPPPPKSAPVKNIGSVSMVTGLAQFMIPVSLFA 160

[Close]

BLAST of CmoCh11G012010 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 )

HSP 1 Score: 151.8 bits (382), Expect = 5.2e-37
Identity = 71/130 (54.62%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 12  LLAAVVL-LLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDDWLFFVYDRNQ 71
           L++AVVL  L+AA + EV+AK++ VGD   W  N+NYT+WA+GKHFY  DWL+FV+ R+Q
Sbjct: 7   LISAVVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVFYRDQ 66

Query: 72  MDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAINVE 131
            ++LEVNK +YE C S  P++N+T GAGRD+V L  TR YY + G+G C  GMKL + VE
Sbjct: 67  HNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLDVLVE 126

Query: 132 HLPPPPSSSP 141
             PPPP  +P
Sbjct: 127 TPPPPPPFTP 136

[Close]

BLAST of CmoCh11G012010 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 )

HSP 1 Score: 108.6 bits (270), Expect = 5.0e-24
Identity = 57/134 (42.54%), Postives = 81/134 (60.45%), Query Frame = 0


Query: 13  LAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDDWLFFVYDRNQMD 72
           L  V +++L   V   S+     G    W S+VN++ WA  + FY  DWL+F ++R + +
Sbjct: 9   LVYVTVMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHN 68

Query: 73  VLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAINVEHL 132
           +L+VNK++YE C   + + N T G GRDV  L   +PYYFI G+G+C  GMKLAI V  L
Sbjct: 69  ILQVNKSSYEQCVDNDYIFNITRG-GRDVFQLLEPKPYYFICGRGYCLKGMKLAITV--L 128

Query: 133 PPPPSSSPLNEKSS 147
           P PP S+P N  S+
Sbjct: 129 PQPPPSAPTNFTST 139

[Close]

BLAST of CmoCh11G012010 vs. TAIR 10
Match: AT4G12880.2 (early nodulin-like protein 19 )

HSP 1 Score: 92.4 bits (228), Expect = 3.7e-19
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 56  FYYDDWLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISG 115
           F+++  L FV+ R+Q ++LEVNK +YE C S  P++N+T GAGRD+V L  TR YY + G
Sbjct: 14  FFFNFSLNFVFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDG 73

Query: 116 KGFCYGGMKLAINVEHLPPPPSSSP 141
           +G C  GMKL + VE  PPPP  +P
Sbjct: 74  RGGCVQGMKLDVLVETPPPPPPFTP 98

The following BLAST results are available for this feature:

BLAST of CmoCh11G012010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	9.5e-44	54.55	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]
Q96316	9.3e-15	41.10	Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1	[more]
Q9T076	4.3e-12	34.06	Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 S...	[more]
Q9SK27	5.6e-12	36.76	Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 S...	[more]
Q41001	1.1e-10	34.27	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]

BLAST of CmoCh11G012010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F095	9.4e-95	100.00	lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111441162 PE=4 SV=1	[more]
A0A6J1HY39	1.8e-90	97.09	lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469068 PE=4 SV=1	[more]
A0A0A0LC11	2.5e-71	80.23	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824220...	[more]
A0A5D3DPZ3	8.0e-70	78.82	Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A1S3B7D2	8.0e-70	78.82	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486966 PE=4 SV=1	[more]

BLAST of CmoCh11G012010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933881.1	1.9e-94	100.00	lamin-like protein [Cucurbita moschata] >KAG6588503.1 Lamin-like protein, partia...	[more]
XP_023530287.1	7.6e-91	97.09	lamin-like protein [Cucurbita pepo subsp. pepo] >XP_023530288.1 lamin-like prote...	[more]
XP_022970072.1	3.8e-90	97.09	lamin-like protein [Cucurbita maxima]	[more]
XP_038903389.1	6.5e-74	82.42	lamin-like protein [Benincasa hispida]	[more]
KAG7022334.1	3.2e-73	97.14	Lamin-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh11G012010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01070.1	3.6e-46	57.86	early nodulin-like protein 16	[more]
AT5G15350.1	6.7e-45	54.55	early nodulin-like protein 17	[more]
AT4G12880.1	5.2e-37	54.62	early nodulin-like protein 19	[more]
AT2G27035.1	5.0e-24	42.54	early nodulin-like protein 20	[more]
AT4G12880.2	3.7e-19	50.59	early nodulin-like protein 19	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 41..123 e-value: 6.0E-21 score: 74.3
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 31..131 score: 35.008862
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 29..132 e-value: 2.8E-30 score: 106.6
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 30..129
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 13..167
None	No IPR available	PANTHER	PTHR33021:SF231	LAMIN-LIKE PROTEIN	coord: 13..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G012010.1	CmoCh11G012010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity