CmoCh11G011860 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G011860
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	phosphoacetylglucosamine mutase-like
Location	Cmo_Chr11: 6929261 .. 6930082 (+)
RNA-Seq Expression	CmoCh11G011860
Synteny	CmoCh11G011860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTTCCTGTTAGATTGAAGCTTCAGATCATGTAAATCGCGCTCTCATCATCAGTTCTTTCATTTCTCCGCTTCGGATTGGTAAGATTCTAAGTTCTTATTTTAAGTTCCTTTCTTTCAGATCCGTTCTTCTTTTATTTTTCATAATCAATACTCACTTCCTCGTGTTTTCTAATCTGACATTCATCATTTGGCCACCCTCAGCCTGTTGGGGTTTAGTTTGGTTCTGTGATTTTCTACTGAAGCAACTACAATCTTCGAATTGCGTTAGTTGAAGAATAGAAACTTTGATGTTTATGTTATATCGGTATAGCCAATTTACACGCTGTATTGCGATCTGATTCTGTTTCATTGTAATGTTGCCTCAATCTGTGAGAACAGGAGTAGCATAGAGATCATGAACGAAGAGCAACGCGATCTCCTTCTTGGCTCATCTGATCGCGTCCCACCTCCTCAAGGTTGCGTTTCCCCAATTTTACCATCTTCTTTTACAGCCGATACTGCTGTTCATAGCTTATAATTCTTGTTTTTGTGTCTGTTATGCTGTTAGGAGTTAGGCTATCATATGGAACCGCAGGTTTTAGGGAGGATGCATCGGTACTTCGTTCGATGTTGTATAGGATGGGAATTTTGGCGGCTTTGAGAGCTTTGAAAACCAATGCCGTGATCGGGTCGATGATCACGGCCTCTCACAACAAAGAATCAGATAATGGGGTAAAAATTGCGGACTCGAATGGTGGGATGCTCAACCAAGAGTGGCAGCCCTTTGCCGAAGCCCTCGCAAATGCGTCCTCCTCGCACGATCTCTTTCAAGTATGA

mRNA sequence

ATGTTCTTTCCTGTTAGATTGAAGCTTCAGATCATGATGGGAATTTTGGCGGCTTTGAGAGCTTTGAAAACCAATGCCGTGATCGGGTCGATGATCACGGCCTCTCACAACAAAGAATCAGATAATGGGGTAAAAATTGCGGACTCGAATGGTGGGATGCTCAACCAAGAGTGGCAGCCCTTTGCCGAAGCCCTCGCAAATGCGTCCTCCTCGCACGATCTCTTTCAAGTATGA

Coding sequence (CDS)

ATGTTCTTTCCTGTTAGATTGAAGCTTCAGATCATGATGGGAATTTTGGCGGCTTTGAGAGCTTTGAAAACCAATGCCGTGATCGGGTCGATGATCACGGCCTCTCACAACAAAGAATCAGATAATGGGGTAAAAATTGCGGACTCGAATGGTGGGATGCTCAACCAAGAGTGGCAGCCCTTTGCCGAAGCCCTCGCAAATGCGTCCTCCTCGCACGATCTCTTTCAAGTATGA

Protein sequence

MFFPVRLKLQIMMGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASSSHDLFQV

Homology

[Close]

BLAST of CmoCh11G011860 vs. ExPASy Swiss-Prot
Match: P57750 (Phosphoacetylglucosamine mutase OS=Arabidopsis thaliana OX=3702 GN=DRT101 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.5e-14
Identity = 39/63 (61.90%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 13  MGILAALRALKT-NAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASSS 72
           +GIL+ALR+LK  +A +G MITASHNK SDNG+K++D +G ML+QEW+PFA+ +ANASS 
Sbjct: 45  VGILSALRSLKLGSATVGLMITASHNKVSDNGIKVSDPSGFMLSQEWEPFADQIANASSP 104

Query: 73  HDL 75
            +L
Sbjct: 105 EEL 107

[Close]

BLAST of CmoCh11G011860 vs. ExPASy Swiss-Prot
Match: Q6ZDQ1 (Phosphoacetylglucosamine mutase OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0195400 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 6.6e-13
Identity = 37/65 (56.92%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 14  GILAALRALKT-NAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASSSH 73
           G++AALR+ K   A +G +ITASHN   DNGVKI D++GGML+Q+W+PFA+ALANA +  
Sbjct: 52  GVVAALRSAKLGGAAVGVVITASHNPVRDNGVKIVDADGGMLSQDWEPFADALANAPNPD 111

Query: 74  DLFQV 78
            L Q+
Sbjct: 112 ALLQI 116

[Close]

BLAST of CmoCh11G011860 vs. ExPASy Swiss-Prot
Match: O95394 (Phosphoacetylglucosamine mutase OS=Homo sapiens OX=9606 GN=PGM3 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.4e-09
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 13 MGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANA 69
          MG+LA LR+ +T + IG M+TASHN E DNGVK+ D  G ML   W+  A  LANA
Sbjct: 42 MGLLAVLRSKQTKSTIGVMVTASHNPEEDNGVKLVDPLGEMLAPSWEEHATCLANA 97

[Close]

BLAST of CmoCh11G011860 vs. ExPASy Swiss-Prot
Match: F1RQM2 (Phosphoacetylglucosamine mutase OS=Sus scrofa OX=9823 GN=PGM3 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 7.6e-09
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 13 MGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANA 69
          MG+LA LR+ +T + IG M+TASHN E DNGVK+ D  G ML   W+  A  LANA
Sbjct: 42 MGLLAVLRSKQTKSTIGVMVTASHNPEDDNGVKLVDPLGEMLAPSWEEHATHLANA 97

[Close]

BLAST of CmoCh11G011860 vs. ExPASy Swiss-Prot
Match: P38628 (Phosphoacetylglucosamine mutase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PCM1 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 7.6e-09
Identity = 33/58 (56.90%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 14  GILAALRALKTNA-VIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASS 71
           GILA LR+LK     +G MITASHN   DNGVKI + +G ML   W+P+A  LANA+S
Sbjct: 45  GILAVLRSLKLQGQYVGVMITASHNPYQDNGVKIVEPDGSMLLATWEPYAMQLANAAS 102

[Close]

BLAST of CmoCh11G011860 vs. ExPASy TrEMBL
Match: A0A6J1EKT7 (phosphoacetylglucosamine mutase-like OS=Cucurbita moschata OX=3662 GN=LOC111435567 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.1e-26
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 13  MGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASSSH 72
           MGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASSSH
Sbjct: 45  MGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASSSH 104

Query: 73  DLFQV 78
           DLFQ+
Sbjct: 105 DLFQL 109

[Close]

BLAST of CmoCh11G011860 vs. ExPASy TrEMBL
Match: A0A6J1HU92 (Phosphoacetylglucosamine mutase OS=Cucurbita maxima OX=3661 GN=LOC111467861 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.6e-17
Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 5   VRLKLQIMMGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEA 64
           V L     +GILAALRALKT AVIG MITASHNK SDNGVKIAD +GGML QEW+PFA A
Sbjct: 37  VLLSTMYRVGILAALRALKTEAVIGLMITASHNKVSDNGVKIADPSGGMLTQEWEPFANA 96

Query: 65  LANASSSHDLFQV 78
           LANA SS DL ++
Sbjct: 97  LANAPSSRDLVRL 109

[Close]

BLAST of CmoCh11G011860 vs. ExPASy TrEMBL
Match: A0A6J1HC41 (Phosphoacetylglucosamine mutase OS=Cucurbita moschata OX=3662 GN=LOC111461980 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.6e-17
Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 5   VRLKLQIMMGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEA 64
           V L     +GILAALRALKT AVIG MITASHNK SDNGVKIAD +GGML QEW+PFA A
Sbjct: 37  VLLSTMYRVGILAALRALKTEAVIGLMITASHNKVSDNGVKIADPSGGMLTQEWEPFANA 96

Query: 65  LANASSSHDLFQV 78
           LANA SS DL ++
Sbjct: 97  LANAPSSRDLVRL 109

[Close]

BLAST of CmoCh11G011860 vs. ExPASy TrEMBL
Match: A0A0A0LWD9 (Phosphoacetylglucosamine mutase OS=Cucumis sativus OX=3659 GN=Csa_1G569350 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.5e-17
Identity = 51/73 (69.86%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 5   VRLKLQIMMGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEA 64
           V L     +GILAALRALKT  +IG MITASHNK SDNGVK+AD +GGML Q+W+PFA A
Sbjct: 37  VLLSTMYRVGILAALRALKTGKLIGLMITASHNKVSDNGVKVADPSGGMLTQDWEPFANA 96

Query: 65  LANASSSHDLFQV 78
           LANASSS DL Q+
Sbjct: 97  LANASSSEDLVQL 109

[Close]

BLAST of CmoCh11G011860 vs. ExPASy TrEMBL
Match: A0A0J8E3Z6 (Phosphoacetylglucosamine mutase OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_5g123290 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.6e-17
Identity = 48/65 (73.85%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 13  MGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASSSH 72
           +GILAALR+LKT +VIG MITASHNK SDNGVKIAD NGGML+Q+W+PFA+ALANAS   
Sbjct: 45  VGILAALRSLKTQSVIGLMITASHNKVSDNGVKIADPNGGMLSQQWEPFADALANASDPS 104

Query: 73  DLFQV 78
           +L Q+
Sbjct: 105 ELLQL 109

[Close]

BLAST of CmoCh11G011860 vs. NCBI nr
Match: XP_022928752.1 (phosphoacetylglucosamine mutase-like [Cucurbita moschata])

HSP 1 Score: 125.9 bits (315), Expect = 1.5e-25
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 13  MGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASSSH 72
           MGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASSSH
Sbjct: 45  MGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASSSH 104

Query: 73  DLFQV 78
           DLFQ+
Sbjct: 105 DLFQL 109

[Close]

BLAST of CmoCh11G011860 vs. NCBI nr
Match: KAG6588490.1 (Phosphoacetylglucosamine mutase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 121.7 bits (304), Expect = 2.8e-24
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 13  MGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASSSH 72
           MGILAALRALKTNAVIG MITASHNKESDNGVKIADSNGGML+QEWQPFAEALANASSSH
Sbjct: 112 MGILAALRALKTNAVIGLMITASHNKESDNGVKIADSNGGMLDQEWQPFAEALANASSSH 171

Query: 73  DLFQV 78
           DLFQ+
Sbjct: 172 DLFQL 176

[Close]

BLAST of CmoCh11G011860 vs. NCBI nr
Match: KAG7022319.1 (Phosphoacetylglucosamine mutase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 121.7 bits (304), Expect = 2.8e-24
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 13  MGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASSSH 72
           MGILAALRALKTNAVIG MITASHNKESDNGVKIADSNGGML+QEWQPFAEALANASSSH
Sbjct: 45  MGILAALRALKTNAVIGLMITASHNKESDNGVKIADSNGGMLDQEWQPFAEALANASSSH 104

Query: 73  DLFQV 78
           DLFQ+
Sbjct: 105 DLFQL 109

[Close]

BLAST of CmoCh11G011860 vs. NCBI nr
Match: XP_022968702.1 (phosphoacetylglucosamine mutase-like [Cucurbita maxima])

HSP 1 Score: 98.2 bits (243), Expect = 3.3e-17
Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 5   VRLKLQIMMGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEA 64
           V L     +GILAALRALKT AVIG MITASHNK SDNGVKIAD +GGML QEW+PFA A
Sbjct: 37  VLLSTMYRVGILAALRALKTEAVIGLMITASHNKVSDNGVKIADPSGGMLTQEWEPFANA 96

Query: 65  LANASSSHDLFQV 78
           LANA SS DL ++
Sbjct: 97  LANAPSSRDLVRL 109

[Close]

BLAST of CmoCh11G011860 vs. NCBI nr
Match: KAG6590447.1 (Phosphoacetylglucosamine mutase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023983.1 Phosphoacetylglucosamine mutase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 98.2 bits (243), Expect = 3.3e-17
Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 5   VRLKLQIMMGILAALRALKTNAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEA 64
           V L     +GILAALRALKT AVIG MITASHNK SDNGVKIAD +GGML QEW+PFA A
Sbjct: 37  VLLSTMYRVGILAALRALKTEAVIGLMITASHNKVSDNGVKIADPSGGMLTQEWEPFANA 96

Query: 65  LANASSSHDLFQV 78
           LANA SS DL ++
Sbjct: 97  LANAPSSRDLVRL 109

[Close]

BLAST of CmoCh11G011860 vs. TAIR 10
Match: AT5G18070.1 (phosphoglucosamine mutase-related )

HSP 1 Score: 78.6 bits (192), Expect = 2.5e-15
Identity = 39/63 (61.90%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 13  MGILAALRALKT-NAVIGSMITASHNKESDNGVKIADSNGGMLNQEWQPFAEALANASSS 72
           +GIL+ALR+LK  +A +G MITASHNK SDNG+K++D +G ML+QEW+PFA+ +ANASS 
Sbjct: 45  VGILSALRSLKLGSATVGLMITASHNKVSDNGIKVSDPSGFMLSQEWEPFADQIANASSP 104

Query: 73  HDL 75
            +L
Sbjct: 105 EEL 107

The following BLAST results are available for this feature:

BLAST of CmoCh11G011860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P57750	3.5e-14	61.90	Phosphoacetylglucosamine mutase OS=Arabidopsis thaliana OX=3702 GN=DRT101 PE=1 S...	[more]
Q6ZDQ1	6.6e-13	56.92	Phosphoacetylglucosamine mutase OS=Oryza sativa subsp. japonica OX=39947 GN=Os07...	[more]
O95394	4.4e-09	55.36	Phosphoacetylglucosamine mutase OS=Homo sapiens OX=9606 GN=PGM3 PE=1 SV=1	[more]
F1RQM2	7.6e-09	55.36	Phosphoacetylglucosamine mutase OS=Sus scrofa OX=9823 GN=PGM3 PE=1 SV=2	[more]
P38628	7.6e-09	56.90	Phosphoacetylglucosamine mutase OS=Saccharomyces cerevisiae (strain ATCC 204508 ...	[more]

BLAST of CmoCh11G011860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EKT7	7.1e-26	98.46	phosphoacetylglucosamine mutase-like OS=Cucurbita moschata OX=3662 GN=LOC1114355...	[more]
A0A6J1HU92	1.6e-17	72.60	Phosphoacetylglucosamine mutase OS=Cucurbita maxima OX=3661 GN=LOC111467861 PE=3...	[more]
A0A6J1HC41	1.6e-17	72.60	Phosphoacetylglucosamine mutase OS=Cucurbita moschata OX=3662 GN=LOC111461980 PE...	[more]
A0A0A0LWD9	3.5e-17	69.86	Phosphoacetylglucosamine mutase OS=Cucumis sativus OX=3659 GN=Csa_1G569350 PE=3 ...	[more]
A0A0J8E3Z6	4.6e-17	73.85	Phosphoacetylglucosamine mutase OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB...	[more]

BLAST of CmoCh11G011860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928752.1	1.5e-25	98.46	phosphoacetylglucosamine mutase-like [Cucurbita moschata]	[more]
KAG6588490.1	2.8e-24	95.38	Phosphoacetylglucosamine mutase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7022319.1	2.8e-24	95.38	Phosphoacetylglucosamine mutase [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022968702.1	3.3e-17	72.60	phosphoacetylglucosamine mutase-like [Cucurbita maxima]	[more]
KAG6590447.1	3.3e-17	72.60	Phosphoacetylglucosamine mutase, partial [Cucurbita argyrosperma subsp. sororia]...	[more]

BLAST of CmoCh11G011860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18070.1	2.5e-15	61.90	phosphoglucosamine mutase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005844	Alpha-D-phosphohexomutase, alpha/beta/alpha domain I	PFAM	PF02878	PGM_PMM_I	coord: 21..68 e-value: 1.6E-8 score: 34.4
None	No IPR available	GENE3D	3.40.120.10		coord: 5..77 e-value: 2.5E-22 score: 81.2
None	No IPR available	PANTHER	PTHR45955	PHOSPHOACETYLGLUCOSAMINE MUTASE	coord: 11..76
IPR016055	Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III	SUPERFAMILY	53738	Phosphoglucomutase, first 3 domains	coord: 20..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G011860.1	CmoCh11G011860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006048	UDP-N-acetylglucosamine biosynthetic process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004610	phosphoacetylglucosamine mutase activity
molecular_function	GO:0016868	intramolecular transferase activity, phosphotransferases