CmoCh11G011790 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G011790
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionREF/SRPP-like protein At3g05500
LocationCmo_Chr11: 6852432 .. 6854578 (+)
RNA-Seq ExpressionCmoCh11G011790
SyntenyCmoCh11G011790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCAATGTCTTCCATTTGACTTTCTAGATCTACGCTCCCATTAAGCTTCCAGTTTCCACCATGGCCGTCCGTTTCGACCGACTCTCAACCTGCGTTCTTCTCCCCTATAAATTCCCTTTCTTCTCCTCTTCCTCTTCCATCGATTCTATCGCTAAGCATTTCCATTTCCCTACAAAATCAATCATCAAATCGCATCTTTCTTCCGTTTTCAATCTCAAGCTCCTCTGAATTTCCCCCCACGTTTTTCCGCTATGGCTGATTCCAATCCTTCGTCGCAGCACCATGAAATGGTACGATTCTCTCATCACTCGAATTTCTTGCGGTTTTTATTTTTGATCTAATTGGATTTGTCGATTTTGTGCGGAATTTCTGTTTTCTGAGATTGTGAGGATTGATCGATTGGATTTTGTGTAGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTATTTGGAGTTTGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTCAACGTTTATGGCTATGCGAAGAACCGGATTGGTCCACTGAGGCCCGGCGTTGAGACTGTCGAGGGCACTGTGAAGTCTGTTGTCGGTCCTTTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTTGGTTTTCTTTCTTCTGTTACTGTTCTATGCATGTTCTTCATATAAATCTCTTCGTTTTCTTCTCGGATTGATTTATCAGATGCCTTTAGTTAATTATCAATTTCAGCCTATGGATTAAAACTTCTCAATTAAGTAATTCTATGGAAAGTATAATGACTTTTTGTGGAGATTAAATTTCTAATATACTGTAGACTTTTCGTTTTGGTCCTTGAACTCTGTTTATACTTTCCCTTAGCATGGCTTCAAGTATCTTTGTTGAATATGGACATGTTACATGTATAAGGCTGAGTATTATTTGAGTTTATGCTAGAAGGATCGAAATGAGTGTTCTCTAAAAAACTTCAAGGATCAAATGAAGATTATACCAATTTTGTAGTTGAAATATCTGAATGGAATTCAAATCAGTTTGTTCATACAAAGTTGATATGTTAGGTAGCATTTTGTGCGCATTTCGAATTCTAATGGAAGAACGTGATGAGAAAACTGAGAATTTACAGGATTGAGGTTGAGATTAGCAAAAAGGATTTTGTTTAGTTAGTTCTTTCCCTTTGGAATGATGCAAATAACCAAACGTTGAATGCTAAAACACTGAGAAACTTATTTTCTTTGATTGTTAATGTATAGGTTGACGCGTCGGTGACCAAGATCGATCGGCATGTACCGCCAACCATCAAGCAAGCCTCATCGCAGGCCATGTCCGCCGCACAGCAAGCGCCTGAAATTGCCCGAAATGTAGCCTTGGAGGTCAGACACACTGGCCTTAAAGACTCTGTCTCTGGCATTGTGAAATCTGTGTATGCCAAGTACGAGCCAACTGCTAAGCAACTCTACTCCAAATACGAGCCGAAGGCCGAGCAATGCGCAGCTTCGGCATGGCACAGACTCAACCAGCTCCCTGTTTTCCCCACTGTCGCACAAGCCATCTTGCCAACTGCAGTGTACTGCACCGAGAAATACAACGAGACCGTGCAAAGCACCTCCAAGAAGGGCTACAAGGTCTCTTCGTACCTCCCATTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAATTGAGATGGAGCCCTTGGTGAACTGAGAGCCCTTGGATTTCCTGGTTTCGAAATAACACATTATGAATGTTTTTGTTGAACGGAGGCACACTTACATGTTGGTGTTGTCATCCTCTCTGAGCCTTGTGTTGTTTTGGCTTCAGATATAGCTATGGCTTTTATGTTTCTTCTTTGGTAAGAGATATTAGTGACACAGGTTTGATATTATATTTGAAGGCTTAATTAATTCCTAGTCTTTCTTCCTGCGTATAACATTAGATGGAAAAAATATTTTAATATTTTTCCTAAGGTGAGAAAGCTTCTCCCTAAAAGACCGTTTTAAATTCATGAGGCTAATAGCCATATGTGACAGGCCTTGACTGGCGGTAGACTTTAGCTGTAGAGTCGACTCTTTATACAAATTTTTAGTGCAGAAGTTTTCATTTCATTAACTCGTTCCATT

mRNA sequence

GTCAATGTCTTCCATTTGACTTTCTAGATCTACGCTCCCATTAAGCTTCCAGTTTCCACCATGGCCGTCCGTTTCGACCGACTCTCAACCTGCGTTCTTCTCCCCTATAAATTCCCTTTCTTCTCCTCTTCCTCTTCCATCGATTCTATCGCTAAGCATTTCCATTTCCCTACAAAATCAATCATCAAATCGCATCTTTCTTCCGTTTTCAATCTCAAGCTCCTCTGAATTTCCCCCCACGTTTTTCCGCTATGGCTGATTCCAATCCTTCGTCGCAGCACCATGAAATGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTATTTGGAGTTTGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTCAACGTTTATGGCTATGCGAAGAACCGGATTGGTCCACTGAGGCCCGGCGTTGAGACTGTCGAGGGCACTGTGAAGTCTGTTGTCGGTCCTTTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTTGACGCGTCGGTGACCAAGATCGATCGGCATGTACCGCCAACCATCAAGCAAGCCTCATCGCAGGCCATGTCCGCCGCACAGCAAGCGCCTGAAATTGCCCGAAATGTAGCCTTGGAGGTCAGACACACTGGCCTTAAAGACTCTGTCTCTGGCATTGTGAAATCTGTGTATGCCAAGTACGAGCCAACTGCTAAGCAACTCTACTCCAAATACGAGCCGAAGGCCGAGCAATGCGCAGCTTCGGCATGGCACAGACTCAACCAGCTCCCTGTTTTCCCCACTGTCGCACAAGCCATCTTGCCAACTGCAGTGTACTGCACCGAGAAATACAACGAGACCGTGCAAAGCACCTCCAAGAAGGGCTACAAGGTCTCTTCGTACCTCCCATTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAATTGAGATGGAGCCCTTGGTGAACTGAGAGCCCTTGGATTTCCTGGTTTCGAAATAACACATTATGAATGTTTTTGTTGAACGGAGGCACACTTACATGTTGGTGTTGTCATCCTCTCTGAGCCTTGTGTTGTTTTGGCTTCAGATATAGCTATGGCTTTTATGTTTCTTCTTTGGTAAGAGATATTAGTGACACAGGTTTGATATTATATTTGAAGGCTTAATTAATTCCTAGTCTTTCTTCCTGCGTATAACATTAGATGGAAAAAATATTTTAATATTTTTCCTAAGGTGAGAAAGCTTCTCCCTAAAAGACCGTTTTAAATTCATGAGGCTAATAGCCATATGTGACAGGCCTTGACTGGCGGTAGACTTTAGCTGTAGAGTCGACTCTTTATACAAATTTTTAGTGCAGAAGTTTTCATTTCATTAACTCGTTCCATT

Coding sequence (CDS)

ATGGCTGATTCCAATCCTTCGTCGCAGCACCATGAAATGGCGGCTAGGGCAGAGGAGGAGAGGCTGAAGTATTTGGAGTTTGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTCAACGTTTATGGCTATGCGAAGAACCGGATTGGTCCACTGAGGCCCGGCGTTGAGACTGTCGAGGGCACTGTGAAGTCTGTTGTCGGTCCTTTGTACAATAAGTTCCACGGCGTTCCGATTGAGGTTCTTAAGTTCGTCGATCGCAAGGTTGACGCGTCGGTGACCAAGATCGATCGGCATGTACCGCCAACCATCAAGCAAGCCTCATCGCAGGCCATGTCCGCCGCACAGCAAGCGCCTGAAATTGCCCGAAATGTAGCCTTGGAGGTCAGACACACTGGCCTTAAAGACTCTGTCTCTGGCATTGTGAAATCTGTGTATGCCAAGTACGAGCCAACTGCTAAGCAACTCTACTCCAAATACGAGCCGAAGGCCGAGCAATGCGCAGCTTCGGCATGGCACAGACTCAACCAGCTCCCTGTTTTCCCCACTGTCGCACAAGCCATCTTGCCAACTGCAGTGTACTGCACCGAGAAATACAACGAGACCGTGCAAAGCACCTCCAAGAAGGGCTACAAGGTCTCTTCGTACCTCCCATTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGGACAGAATTGAGATGGAGCCCTTGGTGAACTGA

Protein sequence

MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPLVN
Homology
[Close]
BLAST of CmoCh11G011790 vs. ExPASy Swiss-Prot
Match: Q9MA63 (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=1 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.4e-77
Identity = 140/240 (58.33%), Postives = 188/240 (78.33%), Query Frame = 0 

Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MA     +Q      + E+ERLKYL+FVQ AA  A   F  +Y  AK++ GPL+PGVE+V
Sbjct: 1   MATQTDLAQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EG VK+VVGP+Y K+H VP+EVLK++D+KVD SVT++DR VPP +KQ S+QA+SAAQ AP
Sbjct: 61  EGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
            +AR +A EVR  G+ ++ SG+ KSVY+KYEP AK+LY+ YEPKAEQCA SAW +LNQLP
Sbjct: 121 IVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           +FP +AQ  +PTA +C+EKYN+TV   ++KGY+V+SY+PLVPTERI+K+F++++ E EPL
Sbjct: 181 LFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]
BLAST of CmoCh11G011790 vs. ExPASy Swiss-Prot
Match: Q9SW70 (Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.4e-69
Identity = 132/230 (57.39%), Postives = 173/230 (75.22%), Query Frame = 0 

Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MA+S    Q        EE+RLKYL+FVQ AA     CF ++Y YAK   GPL+PGV+TV
Sbjct: 1   MAESEAKQQPE--TVHGEEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVK+V+GP+Y KF+ VP E+L FVDRKV+AS+ +++RHVP  +K+AS QA++ AQ+AP
Sbjct: 61  EGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           E+A  VA EV+  G+ D+   I K+VY+K EPTAK+L SKYEP AEQ A SAW  LN+LP
Sbjct: 121 ELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVF 231
           +FP VAQ ++PTA Y +EKYN++V  T+++GY V+ YLPL+PTERIAKVF
Sbjct: 181 LFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVF 228

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BLAST of CmoCh11G011790 vs. ExPASy Swiss-Prot
Match: A2Y0H2 (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017815 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.8e-57
Identity = 114/219 (52.05%), Postives = 153/219 (69.86%), Query Frame = 0 

Query: 12  EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPL 71
           EM A AEEERL+YLEFVQ AA +        Y YAK   GPLRPGV+ VEGTVK+VVGP+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVR 131
           Y++FHGVP+++LKF+DRKV  SV ++DR VPP +K           +AP +AR+ A EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 HTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILP 191
             GL  + +G+ KS  A+ EP A+ LY++YEP AE+ AA AW  LN+LP+ P+V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVF 231
            A   + +YN  V   +K+G  V++YLPLVPTER+++VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

[Close]
BLAST of CmoCh11G011790 vs. ExPASy Swiss-Prot
Match: Q9FRA7 (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 223.4 bits (568), Expect = 2.8e-57
Identity = 114/219 (52.05%), Postives = 153/219 (69.86%), Query Frame = 0 

Query: 12  EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPL 71
           EM A AEEERL+YLEFVQ AA +        Y YAK   GPLRPGV+ VEGTVK+VVGP+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVR 131
           Y++FHGVP+++LKF+DRKV  SV ++DR VPP +K           +AP +AR+ A EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 HTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILP 191
             GL  + +G+ KS  A+ EP A+ LY++YEP AE+ AA AW  LN+LP+ P+V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVF 231
            A   + +YN  V   +K+G  V++YLPLVPTER+++VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

[Close]
BLAST of CmoCh11G011790 vs. ExPASy Swiss-Prot
Match: O82803 (Small rubber particle protein OS=Hevea brasiliensis OX=3981 GN=SRPP PE=1 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.5e-52
Identity = 110/221 (49.77%), Postives = 146/221 (66.06%), Query Frame = 0 

Query: 13  MAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLY 72
           MA   EEERLKYL+FV+ A   A + F  +Y YAK+  GPL+PGV+T+E  VK+VV P+Y
Sbjct: 1   MAEEVEEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVY 60

Query: 73  NKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRH 132
                +P+E +KFVD+ VD SVT +D  VPP IKQ S+Q  S AQ AP I  +VA  V +
Sbjct: 61  Y----IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFN 120

Query: 133 TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPT 192
           TG+++                AK LY+  EPKAEQ A   W  LN+LP+ P VA  ++PT
Sbjct: 121 TGVQEG---------------AKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPT 180

Query: 193 AVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKD 234
           AVY +EKYN+ V+ T+++GY+VSSYLPL+PTE+I KVF  +
Sbjct: 181 AVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTEKITKVFGDE 202

[Close]
BLAST of CmoCh11G011790 vs. ExPASy TrEMBL
Match: A0A6J1F5J8 (REF/SRPP-like protein At3g05500 OS=Cucurbita moschata OX=3662 GN=LOC111441035 PE=3 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 8.8e-131
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0 

Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]
BLAST of CmoCh11G011790 vs. ExPASy TrEMBL
Match: A0A6J1HXN7 (REF/SRPP-like protein At3g05500 OS=Cucurbita maxima OX=3661 GN=LOC111468972 PE=3 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 4.8e-129
Identity = 238/242 (98.35%), Postives = 240/242 (99.17%), Query Frame = 0 

Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRA+ECFFN YGYAKNRIGPLRPGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRASECFFNAYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVD SVTKIDRHVPPTIKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           EIARNVA+EVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP
Sbjct: 121 EIARNVAMEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]
BLAST of CmoCh11G011790 vs. ExPASy TrEMBL
Match: A0A1S3BP12 (REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=3 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 3.0e-115
Identity = 213/242 (88.02%), Postives = 230/242 (95.04%), Query Frame = 0 

Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADS+ SSQ  +MA RA+E+RLKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPL NKFHGVPIEVLKFVDRKVD SVTKIDRHVPPT+K ASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           E+ARNVA EVR +GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTA YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]
BLAST of CmoCh11G011790 vs. ExPASy TrEMBL
Match: A0A0A0M1J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569430 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.4e-112
Identity = 209/242 (86.36%), Postives = 226/242 (93.39%), Query Frame = 0 

Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADS+ SSQ  +M  RA++  LKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVV PLYNKFHGVPIEVLKFVDRKVD SVTKIDRHVPPT+KQASSQAM AAQQAP
Sbjct: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           E+AR+VA EVR  GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTA YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]
BLAST of CmoCh11G011790 vs. ExPASy TrEMBL
Match: A0A5D3CFW4 (REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003980 PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 9.1e-112
Identity = 206/230 (89.57%), Postives = 221/230 (96.09%), Query Frame = 0 

Query: 13  MAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLY 72
           MA RA+E+RLKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETVEGTVKSVVGPL 
Sbjct: 1   MAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLC 60

Query: 73  NKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRH 132
           NKFHGVPIEVLKFVDRKVD SVTKIDRHVPPT+K ASSQAMSAAQQAPE+ARNVA EVR 
Sbjct: 61  NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAPEVARNVASEVRR 120

Query: 133 TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPT 192
           +GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWH+LNQLPVFPTVAQAILPT
Sbjct: 121 SGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILPT 180

Query: 193 AVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPLVN 243
           A YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPLVN
Sbjct: 181 AAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPLVN 230

[Close]
BLAST of CmoCh11G011790 vs. NCBI nr
Match: XP_022933698.1 (REF/SRPP-like protein At3g05500 [Cucurbita moschata])

HSP 1 Score: 476.1 bits (1224), Expect = 1.8e-130
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0 

Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]
BLAST of CmoCh11G011790 vs. NCBI nr
Match: KAG6588484.1 (REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022313.1 REF/SRPP-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 474.2 bits (1219), Expect = 6.9e-130
Identity = 241/242 (99.59%), Postives = 241/242 (99.59%), Query Frame = 0 

Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVD SVTKIDRHVPPTIKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]
BLAST of CmoCh11G011790 vs. NCBI nr
Match: XP_023530281.1 (REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.1 bits (1211), Expect = 5.8e-129
Identity = 240/242 (99.17%), Postives = 240/242 (99.17%), Query Frame = 0 

Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADSNPSSQH EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV
Sbjct: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVD SVTKIDRHVPPTIKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]
BLAST of CmoCh11G011790 vs. NCBI nr
Match: XP_022969922.1 (REF/SRPP-like protein At3g05500 [Cucurbita maxima])

HSP 1 Score: 470.3 bits (1209), Expect = 9.9e-129
Identity = 238/242 (98.35%), Postives = 240/242 (99.17%), Query Frame = 0 

Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRA+ECFFN YGYAKNRIGPLRPGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRASECFFNAYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVD SVTKIDRHVPPTIKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           EIARNVA+EVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP
Sbjct: 121 EIARNVAMEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]
BLAST of CmoCh11G011790 vs. NCBI nr
Match: XP_008450634.1 (PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo])

HSP 1 Score: 424.5 bits (1090), Expect = 6.2e-115
Identity = 213/242 (88.02%), Postives = 230/242 (95.04%), Query Frame = 0 

Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MADS+ SSQ  +MA RA+E+RLKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EGTVKSVVGPL NKFHGVPIEVLKFVDRKVD SVTKIDRHVPPT+K ASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
           E+ARNVA EVR +GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           VFPTVAQAILPTA YCTEKYNETV++++KKGYKVSSYLPLVPTERIAKVFSK+ +EMEPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]
BLAST of CmoCh11G011790 vs. TAIR 10
Match: AT3G05500.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 290.0 bits (741), Expect = 1.7e-78
Identity = 140/240 (58.33%), Postives = 188/240 (78.33%), Query Frame = 0 

Query: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60
           MA     +Q      + E+ERLKYL+FVQ AA  A   F  +Y  AK++ GPL+PGVE+V
Sbjct: 1   MATQTDLAQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120
           EG VK+VVGP+Y K+H VP+EVLK++D+KVD SVT++DR VPP +KQ S+QA+SAAQ AP
Sbjct: 61  EGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAP 120

Query: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180
            +AR +A EVR  G+ ++ SG+ KSVY+KYEP AK+LY+ YEPKAEQCA SAW +LNQLP
Sbjct: 121 IVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLP 180

Query: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240
           +FP +AQ  +PTA +C+EKYN+TV   ++KGY+V+SY+PLVPTERI+K+F++++ E EPL
Sbjct: 181 LFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]
BLAST of CmoCh11G011790 vs. TAIR 10
Match: AT2G47780.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 176.0 bits (445), Expect = 3.6e-44
Identity = 93/217 (42.86%), Postives = 132/217 (60.83%), Query Frame = 0 

Query: 18  EEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLYNKFHG 77
           +E +LK+LEF+Q AA     CF  +Y  AK+  GPL+ GVE +E  V++V+ PLY KFH 
Sbjct: 37  DEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHD 96

Query: 78  VPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRHTGLKD 137
           VP ++L FVDRKVD     ++ +VP  +KQASSQA++           VA EV+ TG+ D
Sbjct: 97  VPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALT-----------VATEVQRTGVVD 156

Query: 138 SVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPTAVYCT 197
           +   I +SV             KYEP AE  AA+ W  LNQLP+FP VA  ++PTA Y +
Sbjct: 157 TTKSIARSV-----------RDKYEPAAEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWS 216

Query: 198 EKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDR 235
           EKYN+ V+    + Y  + YLP++P E+I+ +  +D+
Sbjct: 217 EKYNDAVRYVGDRDYFGAEYLPMIPIEKISDILEQDQ 231

[Close]
BLAST of CmoCh11G011790 vs. TAIR 10
Match: AT1G67360.2 (Rubber elongation factor protein (REF) )

HSP 1 Score: 116.3 bits (290), Expect = 3.4e-26
Identity = 74/217 (34.10%), Postives = 104/217 (47.93%), Query Frame = 0 

Query: 17  AEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLYNKFH 76
           ++E  LK+L FV+ A         N+Y YAK   GPL+  VE VEG V +VV P+Y KF 
Sbjct: 8   SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 77  GVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRHTGLK 136
            VP  +L F+D KV     K D H PP  K+  +QA     +A E A++   E R  G K
Sbjct: 68  DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query: 137 DSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPTAVYC 196
            + +      YA  E         Y+      +   W +LNQ      +    LP A + 
Sbjct: 128 AAFN------YAATE---------YKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHF 187

Query: 197 TEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKD 234
           + +YN+ V   +  GY +  YLPLVP + I K + K+
Sbjct: 188 SSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKE 209

[Close]
BLAST of CmoCh11G011790 vs. TAIR 10
Match: AT1G67360.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 116.3 bits (290), Expect = 3.4e-26
Identity = 74/217 (34.10%), Postives = 104/217 (47.93%), Query Frame = 0 

Query: 17  AEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETVEGTVKSVVGPLYNKFH 76
           ++E  LK+L FV+ A         N+Y YAK   GPL+  VE VEG V +VV P+Y KF 
Sbjct: 8   SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 77  GVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAPEIARNVALEVRHTGLK 136
            VP  +L F+D KV     K D H PP  K+  +QA     +A E A++   E R  G K
Sbjct: 68  DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query: 137 DSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLPVFPTVAQAILPTAVYC 196
            + +      YA  E         Y+      +   W +LNQ      +    LP A + 
Sbjct: 128 AAFN------YAATE---------YKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHF 187

Query: 197 TEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKD 234
           + +YN+ V   +  GY +  YLPLVP + I K + K+
Sbjct: 188 SSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKE 209

The following BLAST results are available for this feature:
BLAST of CmoCh11G011790 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9MA632.4e-7758.33REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=... [more]
Q9SW702.4e-6957.39Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1[more]
A2Y0H22.8e-5752.05REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_0... [more]
Q9FRA72.8e-5752.05REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonic... [more]
O828033.5e-5249.77Small rubber particle protein OS=Hevea brasiliensis OX=3981 GN=SRPP PE=1 SV=1[more]
BLAST of CmoCh11G011790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F5J88.8e-131100.00REF/SRPP-like protein At3g05500 OS=Cucurbita moschata OX=3662 GN=LOC111441035 PE... [more]
A0A6J1HXN74.8e-12998.35REF/SRPP-like protein At3g05500 OS=Cucurbita maxima OX=3661 GN=LOC111468972 PE=3... [more]
A0A1S3BP123.0e-11588.02REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=3 SV=... [more]
A0A0A0M1J01.4e-11286.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569430 PE=3 SV=1[more]
A0A5D3CFW49.1e-11289.57REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16... [more]
BLAST of CmoCh11G011790 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022933698.11.8e-130100.00REF/SRPP-like protein At3g05500 [Cucurbita moschata][more]
KAG6588484.16.9e-13099.59REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG70223... [more]
XP_023530281.15.8e-12999.17REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo][more]
XP_022969922.19.9e-12998.35REF/SRPP-like protein At3g05500 [Cucurbita maxima][more]
XP_008450634.16.2e-11588.02PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo][more]
BLAST of CmoCh11G011790 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G05500.11.7e-7858.33Rubber elongation factor protein (REF) [more]
AT2G47780.13.6e-4442.86Rubber elongation factor protein (REF) [more]
AT1G67360.23.4e-2634.10Rubber elongation factor protein (REF) [more]
AT1G67360.13.4e-2634.10Rubber elongation factor protein (REF) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008802Rubber elongation factorPFAMPF05755REFcoord: 17..231
e-value: 3.5E-88
score: 294.8
IPR008802Rubber elongation factorPANTHERPTHR33732REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940coord: 10..233
NoneNo IPR availablePANTHERPTHR33732:SF9REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940coord: 10..233

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G011790.1CmoCh11G011790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0080186 developmental vegetative growth
biological_process GO:0034389 lipid droplet organization
biological_process GO:0019915 lipid storage
biological_process GO:0045927 positive regulation of growth
biological_process GO:1902584 positive regulation of response to water deprivation
biological_process GO:0006414 translational elongation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005811 lipid droplet
molecular_function GO:0003746 translation elongation factor activity