CmoCh11G010770 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G010770
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr11: 6032808 .. 6033610 (-)
RNA-Seq ExpressionCmoCh11G010770
SyntenyCmoCh11G010770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAAAAAAAAGGGTTGAAAAAGGAAAAGGAAAACCGTCCAATTGCTGACCGGTTGTCTTGTTTGCGTCAGTATCTGATATATTGCGAGGTCAGCCGCTTGCAACCAGAACACTCCACGAGGAAGCGGACCTCAACAAGCAGATCGGCGGCCGAACTCTGGTTCTGCCCCGGCGATTTTTTTTACTCGGGGCTCTACTATCCGACTATCTCTACGGTAATTCAAATCCCATGTTCTTCCGATTAATGCTGAATTTTGCTCTATGCTGTTTGATTTATCATCTGTTGCCAATTTCCAGATCTGCTTCTATTTTGATTTCCGCTGCTTGTAGAACCTTTGAGCCTGTTCATTTCGTTAACACTTTAGCTTAAATCGAGTGATTCTGTCTCTATCCATGTCAATAATGTTCGATCTATAAATGAATCTGTGTTCTGAGCGAGCGCATGAGGCTTTTGTTATTGTTTGTGTGTAAATATGTCACCAACGCATGAGGCTTTTGCAACAAAGTGCTGGACATTTCATCTTTAGTATTTGCTTGCAAGCATCATTCATCATTCATCATTTGAGTTGTTTTCGCTAGATCTGCAGTAGCCACTGTTAACAAGCGAACTTAAAAATGAAGAATGGGTAAAGAAGCGCCTCTTAATTGGTTGTTTCGGACTCTATGGATGTGATTATTGATTATGTTGGCTTTTCTTTTTTATTGATGGAACCTTCCTTCTAATTTATTTCCTGAAGTTGAATCGATTTTGCATAGTTTTTTTATATAAATTCTTTTTCTATCATAGATAAACATATAA

mRNA sequence

ATGAAAAAAAAAAAAGGGTTGAAAAAGGAAAAGGAAAACCGTCCAATTGCTGACCGGTTGTCTTGTTTGCGTCAGTATCTGATATATTGCGAGGTCAGCCGCTTGCAACCAGAACACTCCACGAGGAAGCGGACCTCAACAAGCAGATCGGCGGCCGAACTCTGGTTCTGCCCCGGCGATTTTTTTTACTCGGGGCTCTACTATCCGACTATCTCTACGATAAACATATAA

Coding sequence (CDS)

ATGAAAAAAAAAAAAGGGTTGAAAAAGGAAAAGGAAAACCGTCCAATTGCTGACCGGTTGTCTTGTTTGCGTCAGTATCTGATATATTGCGAGGTCAGCCGCTTGCAACCAGAACACTCCACGAGGAAGCGGACCTCAACAAGCAGATCGGCGGCCGAACTCTGGTTCTGCCCCGGCGATTTTTTTTACTCGGGGCTCTACTATCCGACTATCTCTACGATAAACATATAA

Protein sequence

MKKKKGLKKEKENRPIADRLSCLRQYLIYCEVSRLQPEHSTRKRTSTSRSAAELWFCPGDFFYSGLYYPTISTINI
Homology
[Close]
BLAST of CmoCh11G010770 vs. NCBI nr
Match: KAG7022246.1 (hypothetical protein SDJN02_15977, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 150.2 bits (378), Expect = 7.1e-33
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 0 

Query: 1  MKKKKGLKKEKENRPIADRLSCLRQYLIYCEVSRLQPEHSTRKRTSTSRSAAELWFCPGD 60
          MKK KGLKKEK+NRPIADRLSCLRQYLIYCE SRLQPEHSTRKRTSTSRSAAELWFCPGD
Sbjct: 1  MKKNKGLKKEKKNRPIADRLSCLRQYLIYCEASRLQPEHSTRKRTSTSRSAAELWFCPGD 60

Query: 61 FFYSGLYYPTISTINI 77
          FFYS LYYPTISTINI
Sbjct: 61 FFYSELYYPTISTINI 76

The following BLAST results are available for this feature:
BLAST of CmoCh11G010770 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh11G010770 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh11G010770 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7022246.17.1e-3394.74hypothetical protein SDJN02_15977, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmoCh11G010770 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G010770.1CmoCh11G010770.1mRNA