CmoCh11G010750 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTCGAGAGCAGCCAGTCCACAAAATCGAGCGAGGACCATTGAAGGGATCTTCGAAGCTTTTTGCTTTCCTTCCCATGGCGGCCTCTGCTCGATTCGTATTCCTATCTCGCGTCACTGATTTTTCTATCAAACCTCGCCTCTCTCCTCTACCGCCGCCGCCCTTGCCTTCATTTTCCTATTCACATCTCGGCGTTCAACGGCGGCGTTTTACTGCCGCCACTGTGAGCTGCCTTATCTCCGGTGTTGATGGTGGCGGAGTTTCCGATGACTTTGTTTCGACGCGGAAGTTGAAATTCGACCGCGGATTTTCCGTAATCGCGAATATGCTTAAGCGGATTGAGCCGCTTGACACCTCCGATATCTCCAAGGGCGTTACTGATGCTGCGAAGGATTCGATGAAGCAGACTATCTCTTCAATGTTTGGTTTGCTTCCGTCTGATCAGTTCGCTGTCACCGTTAGGGTTTGCAAAAGCTCTCTTCATAACCTCCTCTCTTCGTCAATTATCACCGGGTAATGAGTTAGATTCATTCTTTTCCGTTAATAGAAGTTTGATGATGTTGTTGATGCTTATGTTTTGTACTCAAAAGCTCTCTCCATAACCTCCTCTCTTCGTCAATTATCACCAGGTACACTCTGTGGAACGCGGAGTATCGGTTGTCTTTGATGAGGAATTTCGATATCTCGCCGGATAGTTTGACGGGATTAGACAGGTCGAAACCACTGGATGTTTCTGACGATGAGGAGACACTGGTTGGCATTGATTCCAATATGGAAGATTGGGATTCAACGAGGCCTCGTCTCTTAGCCGATTTACCCCCCGAGGCGTTGAAGTATATCCAGCAGTTGCAGTCGGAATTATCGAATCTCAAAGATGTAAGGATTCACTTGGTTGTTAACAATCTTCACTCTTGCTAATTTACAACAACTTATTCTTTCATTGTCTGCCCATGATCTGACGAACTGAATTTTTAAAATCATTTCTAATCTGTAAAGAAAATTCAGTATCCTAAATTGGGGCAGAGCCTTTCATTTGTCTCATGATTTTATTTCTAAAATTAACAAATGAAGGGTTTCTTTTACTATTTTAAGATGCCAAGTCAGTTGGATACAACTCCTCATAGTTTGATGCTATTAGCTATGTTATGTGGTGCCTGTATCATGATTCATACTTGTTGGACGAGGAGTTACCATATTATCTTATTTTAATTAGAAACAATTTCATTGATGGTATGAAATTACAAAAGGGACAAAGCCCCCACCCAAAGAATTACGTAAAACCTCTCCAATTCGAAAGAAAGGTATAATGATAGTGATGAAAGAGTCAAGAAGATTTACACAAGTGAAGAACCAGAATAACTATATTGTCAAAAAAATAAAATAAAATAAAAAAACAACTATGAAATGAAAGGTCCTTATCTTGGAAGATTTGTTTTCGATTCCTCTCTTGCCAAACACTCCAGCTGAAAGCTCATATAAAGTTCATCCATCCAGAAGAAGTTACCATGTTACTATATTCCTATTTGTTATATTATTGAGGGTATGAGAAATTGAAGTATTATATATTTCTCTTCCGTTTCAGCTATTTACCTAGTTTTACAACATTATGGAAGCATTTGCAGTTAGATTCAATAATTTAGTTTAGTTTCAGTGATTAGCTTGTATTTTGTAGAGTTCGTCGTCACCATCTCTATCTTGGTTGTTTACTGGGCTTGTAGCTTAATGTCATAAATTTGGTGAAAAATATACTGTTAGGCGATGTGATTCATCATAGATATAGACTCCAATTTAGTAAACGAAAACACCATCAGATTGACTATGAAGTTTTGTAGTACATGCTTAGATTTTAGCTTTGTGGCCCGACCTAACCTGCTATCAGCTCATGTTCTTTAATTTTCATTCGAAGCGTTAAGGTGAAATAAACTAGTGTTTAATTGTTTATTTTCATGAAGTAAATTTCATTTTTTTTCCTTTTAGTATACTTCATTCAGAATAGATTGGGAGGTTTCCCTTATATTTTGTTCTGAATGTGCCAGGAACTAAATGCTCGGAAGCAAGAAAATATGCAGATGGAACATGGAAGAGGAAATAGGAACAATTTATTAGAGTATCTGCGATCTTTGGATTCTAATATGGTATTTCATCTTTTAATGTCCATAATATGCCTTTATTTTTCCAACTTGCAACTACGCCCGTGTGGTTGGTGCTCAAGCTGTTTAACTTCGTCGTTCTAGGAGCTCTCATTCTTACCTCCACGTTTGTTATTAGGTGACCGAACTCAGCAAACCATCTACGTCGGAGGTGGAGGAAATCATCCATGAGCTTGTTGGAAACATATTGCAAAGGTTTTTCAAAGATGATGCTAGCTCTACTTTTTTTGAGGACTCGAGCGTGGCGGATTTGGAGAAACTTGCCAATGCTGGCAATGAGTTTTATGATACTGTAGGCACTTCTCGGGATTACCTAGCAAAGCTCTTATTTTGGTTAGTTGGCCTCATATTATCTTTCAGTTTATAATCCTTCTTCTTGGAAAGCTTTACTTACCATAGTTAAACCTGAGTGATCTGATGCCTAAACTAAGAACTTCCAAGCTCATTTGCTACTAGAAGTTCGTAATTAGACATTTAAACTTGTTTTAGGTTCTTCGAATCCCGGAACGAGTTGTCTGAGGATCTAACTTGATGAAATTTACTGCTACAGGTGTATGTTATTGGGGCATCGCTTGAGAAGCTTGGAGAACAGACTGCAGTTAAGCTGTGTTGTTGGGTTGTTATAAGAGAAGGAAGTGTACATTCTCTCTGTACTTCCCCCCCTTATCTTTTATACTATATTATGTCCATAAATCTCTATAATTGTTCTTCAATGAAAGAAGAACTTATTTAGTCTCTCTTATATTTATGATTAATAAAACATATTTTGACCAACAATGTCAATTAGCAAAACTTAAAGTGGTCTCTGATGAGCCAGAGGAGCTGTGAACTGAGTGAATTGGAGGCCTTGGATCATCCCCTGGCCATTGAGGTAACCCCATTAACCCGTTC TTCTCGAGAGCAGCCAGTCCACAAAATCGAGCGAGGACCATTGAAGGGATCTTCGAAGCTTTTTGCTTTCCTTCCCATGGCGGCCTCTGCTCGATTCGTATTCCTATCTCGCGTCACTGATTTTTCTATCAAACCTCGCCTCTCTCCTCTACCGCCGCCGCCCTTGCCTTCATTTTCCTATTCACATCTCGGCGTTCAACGGCGGCGTTTTACTGCCGCCACTGTGAGCTGCCTTATCTCCGGTGTTGATGGTGGCGGAGTTTCCGATGACTTTGTTTCGACGCGGAAGTTGAAATTCGACCGCGGATTTTCCGTAATCGCGAATATGCTTAAGCGGATTGAGCCGCTTGACACCTCCGATATCTCCAAGGGCGTTACTGATGCTGCGAAGGATTCGATGAAGCAGACTATCTCTTCAATGTTTGGTTTGCTTCCGTCTGATCAGTTCGCTGTCACCGTTAGGGTTTGCAAAAGCTCTCTTCATAACCTCCTCTCTTCGTCAATTATCACCGGGTACACTCTGTGGAACGCGGAGTATCGGTTGTCTTTGATGAGGAATTTCGATATCTCGCCGGATAGTTTGACGGGATTAGACAGGTCGAAACCACTGGATGTTTCTGACGATGAGGAGACACTGGTTGGCATTGATTCCAATATGGAAGATTGGGATTCAACGAGGCCTCGTCTCTTAGCCGATTTACCCCCCGAGGCGTTGAAGTATATCCAGCAGTTGCAGTCGGAATTATCGAATCTCAAAGATGAACTAAATGCTCGGAAGCAAGAAAATATGCAGATGGAACATGGAAGAGGAAATAGGAACAATTTATTAGAGTATCTGCGATCTTTGGATTCTAATATGGTGACCGAACTCAGCAAACCATCTACGTCGGAGGTGGAGGAAATCATCCATGAGCTTGTTGGAAACATATTGCAAAGGTTTTTCAAAGATGATGCTAGCTCTACTTTTTTTGAGGACTCGAGCGTGGCGGATTTGGAGAAACTTGCCAATGCTGGCAATGAGTTTTATGATACTGTAGGCACTTCTCGGGATTACCTAGCAAAGCTCTTATTTTGGTGTATGTTATTGGGGCATCGCTTGAGAAGCTTGGAGAACAGACTGCAGTTAAGCTGTGTTGTTGGGTTGTTATAAGAGAAGGAAGTGTACATTCTCTCTGTACTTCCCCCCCTTATCTTTTATACTATATTATGTCCATAAATCTCTATAATTGTTCTTCAATGAAAGAAGAACTTATTTAGTCTCTCTTATATTTATGATTAATAAAACATATTTTGACCAACAATGTCAATTAGCAAAACTTAAAGTGGTCTCTGATGAGCCAGAGGAGCTGTGAACTGAGTGAATTGGAGGCCTTGGATCATCCCCTGGCCATTGAGGTAACCCCATTAACCCGTTC ATGGCGGCCTCTGCTCGATTCGTATTCCTATCTCGCGTCACTGATTTTTCTATCAAACCTCGCCTCTCTCCTCTACCGCCGCCGCCCTTGCCTTCATTTTCCTATTCACATCTCGGCGTTCAACGGCGGCGTTTTACTGCCGCCACTGTGAGCTGCCTTATCTCCGGTGTTGATGGTGGCGGAGTTTCCGATGACTTTGTTTCGACGCGGAAGTTGAAATTCGACCGCGGATTTTCCGTAATCGCGAATATGCTTAAGCGGATTGAGCCGCTTGACACCTCCGATATCTCCAAGGGCGTTACTGATGCTGCGAAGGATTCGATGAAGCAGACTATCTCTTCAATGTTTGGTTTGCTTCCGTCTGATCAGTTCGCTGTCACCGTTAGGGTTTGCAAAAGCTCTCTTCATAACCTCCTCTCTTCGTCAATTATCACCGGGTACACTCTGTGGAACGCGGAGTATCGGTTGTCTTTGATGAGGAATTTCGATATCTCGCCGGATAGTTTGACGGGATTAGACAGGTCGAAACCACTGGATGTTTCTGACGATGAGGAGACACTGGTTGGCATTGATTCCAATATGGAAGATTGGGATTCAACGAGGCCTCGTCTCTTAGCCGATTTACCCCCCGAGGCGTTGAAGTATATCCAGCAGTTGCAGTCGGAATTATCGAATCTCAAAGATGAACTAAATGCTCGGAAGCAAGAAAATATGCAGATGGAACATGGAAGAGGAAATAGGAACAATTTATTAGAGTATCTGCGATCTTTGGATTCTAATATGGTGACCGAACTCAGCAAACCATCTACGTCGGAGGTGGAGGAAATCATCCATGAGCTTGTTGGAAACATATTGCAAAGGTTTTTCAAAGATGATGCTAGCTCTACTTTTTTTGAGGACTCGAGCGTGGCGGATTTGGAGAAACTTGCCAATGCTGGCAATGAGTTTTATGATACTGTAGGCACTTCTCGGGATTACCTAGCAAAGCTCTTATTTTGGTGTATGTTATTGGGGCATCGCTTGAGAAGCTTGGAGAACAGACTGCAGTTAAGCTGTGTTGTTGGGTTGTTATAA MAASARFVFLSRVTDFSIKPRLSPLPPPPLPSFSYSHLGVQRRRFTAATVSCLISGVDGGGVSDDFVSTRKLKFDRGFSVIANMLKRIEPLDTSDISKGVTDAAKDSMKQTISSMFGLLPSDQFAVTVRVCKSSLHNLLSSSIITGYTLWNAEYRLSLMRNFDISPDSLTGLDRSKPLDVSDDEETLVGIDSNMEDWDSTRPRLLADLPPEALKYIQQLQSELSNLKDELNARKQENMQMEHGRGNRNNLLEYLRSLDSNMVTELSKPSTSEVEEIIHELVGNILQRFFKDDASSTFFEDSSVADLEKLANAGNEFYDTVGTSRDYLAKLLFWCMLLGHRLRSLENRLQLSCVVGLL Homology
BLAST of CmoCh11G010750 vs. ExPASy TrEMBL
Match: A0A6J1F5U7 (uncharacterized protein LOC111441107 OS=Cucurbita moschata OX=3662 GN=LOC111441107 PE=4 SV=1) HSP 1 Score: 693.3 bits (1788), Expect = 5.1e-196 Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0
BLAST of CmoCh11G010750 vs. ExPASy TrEMBL
Match: A0A6J1I218 (uncharacterized protein LOC111469784 OS=Cucurbita maxima OX=3661 GN=LOC111469784 PE=4 SV=1) HSP 1 Score: 662.9 bits (1709), Expect = 7.5e-187 Identity = 343/358 (95.81%), Postives = 349/358 (97.49%), Query Frame = 0
BLAST of CmoCh11G010750 vs. ExPASy TrEMBL
Match: A0A6J1D928 (uncharacterized protein LOC111018383 OS=Momordica charantia OX=3673 GN=LOC111018383 PE=4 SV=1) HSP 1 Score: 611.3 bits (1575), Expect = 2.6e-171 Identity = 322/363 (88.71%), Postives = 335/363 (92.29%), Query Frame = 0
BLAST of CmoCh11G010750 vs. ExPASy TrEMBL
Match: A0A5A7UHK4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1804G00130 PE=4 SV=1) HSP 1 Score: 602.1 bits (1551), Expect = 1.6e-168 Identity = 319/364 (87.64%), Postives = 335/364 (92.03%), Query Frame = 0
BLAST of CmoCh11G010750 vs. ExPASy TrEMBL
Match: A0A1S3B853 (uncharacterized protein LOC103487044 OS=Cucumis melo OX=3656 GN=LOC103487044 PE=4 SV=1) HSP 1 Score: 602.1 bits (1551), Expect = 1.6e-168 Identity = 319/364 (87.64%), Postives = 335/364 (92.03%), Query Frame = 0
BLAST of CmoCh11G010750 vs. NCBI nr
Match: XP_022933800.1 (uncharacterized protein LOC111441107 [Cucurbita moschata]) HSP 1 Score: 693.3 bits (1788), Expect = 1.1e-195 Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0
BLAST of CmoCh11G010750 vs. NCBI nr
Match: KAG7022245.1 (hypothetical protein SDJN02_15975 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 686.8 bits (1771), Expect = 1.0e-193 Identity = 356/360 (98.89%), Postives = 357/360 (99.17%), Query Frame = 0
BLAST of CmoCh11G010750 vs. NCBI nr
Match: XP_023531898.1 (uncharacterized protein LOC111794025 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 681.8 bits (1758), Expect = 3.2e-192 Identity = 353/360 (98.06%), Postives = 356/360 (98.89%), Query Frame = 0
BLAST of CmoCh11G010750 vs. NCBI nr
Match: XP_022970981.1 (uncharacterized protein LOC111469784 [Cucurbita maxima]) HSP 1 Score: 662.9 bits (1709), Expect = 1.5e-186 Identity = 343/358 (95.81%), Postives = 349/358 (97.49%), Query Frame = 0
BLAST of CmoCh11G010750 vs. NCBI nr
Match: XP_022150129.1 (uncharacterized protein LOC111018383 [Momordica charantia]) HSP 1 Score: 611.3 bits (1575), Expect = 5.3e-171 Identity = 322/363 (88.71%), Postives = 335/363 (92.29%), Query Frame = 0
BLAST of CmoCh11G010750 vs. TAIR 10
Match: AT5G14970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits to 397 proteins in 95 species: Archae - 0; Bacteria - 294; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). ) HSP 1 Score: 336.7 bits (862), Expect = 2.4e-92 Identity = 200/367 (54.50%), Postives = 254/367 (69.21%), Query Frame = 0
BLAST of CmoCh11G010750 vs. TAIR 10
Match: AT2G14910.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14970.1); Has 605 Blast hits to 425 proteins in 102 species: Archae - 0; Bacteria - 300; Metazoa - 25; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink). ) HSP 1 Score: 168.7 bits (426), Expect = 8.5e-42 Identity = 135/374 (36.10%), Postives = 195/374 (52.14%), Query Frame = 0
BLAST of CmoCh11G010750 vs. TAIR 10
Match: AT2G14910.2 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 143.7 bits (361), Expect = 2.9e-34 Identity = 121/351 (34.47%), Postives = 178/351 (50.71%), Query Frame = 0
BLAST of CmoCh11G010750 vs. TAIR 10
Match: AT1G63610.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 537 Blast hits to 411 proteins in 100 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). ) HSP 1 Score: 86.3 bits (212), Expect = 5.5e-17 Identity = 79/288 (27.43%), Postives = 133/288 (46.18%), Query Frame = 0
BLAST of CmoCh11G010750 vs. TAIR 10
Match: AT1G63610.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 85.5 bits (210), Expect = 9.4e-17 Identity = 75/277 (27.08%), Postives = 128/277 (46.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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