CmoCh11G010560 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G010560
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	WD_REPEATS_REGION domain-containing protein
Location	Cmo_Chr11: 5897798 .. 5902534 (+)
RNA-Seq Expression	CmoCh11G010560
Synteny	CmoCh11G010560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGCCGTGGTGTTGAAAGATTTGCAGGGAGGAGGGGAAGAGATCAAATTTGCAAAATCCAAGCAATATAGTTGCAGTCCATTTCCTGTCGGGGGTTTTGCTCTGTTGGAAGATTTTGGAAATTGTAAACCCTGCAAAACCAATCACCATCGCCATCGATGGACCAGAATCAGAGCTTGCCGACCGCCATTACCGACTTGAATGAAGATTCTCTGGCTCACTGCGCCACATTCCTCAACCTCCACGACATCTTCAATCTCGCCACCACCTGCAAATATCTCCGACAAGCAGCCTATTCCGAATCAATCTGGCAACGCCTTTTCAGGTTCTCCATATCCTCTTCTATTTCCATTCTGCTCTTTTATGAATTTCCGAATCAACAATTGGGATTGTCGTTCTTTTCTGTAGGGAGCGATGGCAGCAACTATTACCGCCTCTTGATTCTTCCGTAGCTTCAGGAGGAGCTAGGGATGCGTACTTGGCTAGGCTTTCCGCTCTTCAACAGTTCAAGTTTGAAGATCCATTGGTTGTTGATATGTTGACCGAACCCGAGCCTTATAACCTTATGCTTTTGGATAGAGATGATGTATTTGTTTCCCGGGTATTGTTTGAATTCTTTTCGAAATTATTTGTGTAATCTTTTCTTTTAATTTGATCTGAATTGCCTTCAATTTTGTTGTCTGGATTGTTGAAATTGATGCCAAGTGAATTAGACTGTTTCTAGTCGCCCACCTTTTGCTATTTTCTGTTGGTTAGGGCTCCTCAATTCGAATGATGAAAATCCCCAAAATTTTTGGCAGGAGTCATTCTCTTACCACTCTGAATGATCACAATGCGCGTATCACTTGTATGAGGTGAGATGTGAGTATTTGCCATGGGACTGGTTTGATTGTTCTAATGATTTATATTCTAGTTGTTTCCATCCTTTGCTTAATTGAACTTGACACTCGTTGAAATGCTCTCTTAGCTGGCTAATGAAATATGATCTCATTTGCAGGTTGTTTCCCCTTACAGAAACTTCATTGTTTAGGAGTGAAGGGAAAAAATCTGGAAATTTTTTGGTAACTTCGAGTTCTGATCACTCGATCCGATTGTGGTGGAAGGTATGGGCAGAAATCATGAATTGGTCCTCTTATGAATTCTTTTGCAGTCGCTAGAAGTAGATACTCTACATTTTTTTGCCACTTTGTTTTTTCCTGATCGTATTTTATTGCTACAAGTTTGAAAATTGGTTGGAAAATTTCATGATATGAATTTGGAAGCCATATCATTATCCTTTAATTGTTTATTTGTGAATCAAGGTTAATATGCCTTTAAGCTTGTCTTACAAAGTTGATATGCGGAAATCACTACAAAGAGAGTAAGATTCGGATTATCTTGTTGATTGAATATCTCAAGGCAAGAACATTGTTTGAGATTGAAATCACCAAGGTAATCCGAATCTTGCTCCTCTTGTAGTGATTTTCACATATCATTTAGTATCAGAGCTTCAGGCTCAAGATCGGATATATGTTTCCGTTGCGTTTCTTCTCAATTTGATTTTTATTTATTTTTATCTTTTTAGTTTTTAATCGACCCAGAGTTTAAAATTCAAAAGTAATGTCCCTAACCCTTTACCTTTTGTTGTGGCCTTACCTTTTATAGGGTTCTTGTCAGAAATGTTTTCGAGGTCATAGTGGCCCTGTTTCAACTCTATCAGATAAACTATTAGGTGATGGTAGTAGCAAAGTACTAGCCAGTGGAGGGGAAGATGGTACAGTTCGCCTTTGGTCTCTTGGTTCCAGTGGCAAGCGAGGCAAGAGTGCTTTAAAGGCTACACTACATGGACATGAGAAACCAATTAAGTTAATGTCAGTTGCAGGGTAAGCAAGCACTTAACTGTATTCTTCTTATAATTGTCCTAGTTTACCTCTCAACTCTTTTTCAATTTTTTTTTTCTATTTACATCAGATCCCTTACTACAGCATGACATCATGTTTTCAGATTGAAATGTTGACCGGAGTATAGCCGTGACATTCTTTCTAAGTTCATCAAACCTAGATATCATAAGGATATGGAATATTTAGGCTGGTTGAATTCAGAGTTGGACCTTTAGAACATACAAGCACTTTGAAACATAGATTCTGATATCCAGTTCTATTTTGATAGCATTTTGCTGCGGTGTCAACACTTTGTAAATTCATGTGCTCACGTGGAAGTCTTTCCAGTACTTAGGAAAATATTGTCTCAATTCTTGTAGCATCATCTCTGTTTTTGCACACAATGACCTTCTTTATTTCTGTAGAGAACTCTCTCATTACTATGATGATATGTTTTAATGTTTTTCTTCTTCTCTTGGTCGTTGCACCCAGACATAAGACATCTCTTTTAGTGAGCATTGCAAGAGATTCCAAGGTATTTTTACAATCTTTTAGTGCTTTCTAATTTAGCATTTTCGCTGCATTTTTTAAGAAGGTTCAATGTTTGGAGAGATGAAAGGTTAATGTGAGAGTACTAGTAAGGGACATGTTGGGGTGTTAGTATGTGTTATTAGTATGGTTATAGTAGTAAAGCTAGGCGTATCTTAGCAAATAATCCAACTGTGTTGTCATAACTTTCTAAACTTTATCTTTGTTGACTGGTGTTATTGGTCACACCATGACATAATTAATTTTTTGTGTTATATAGCATTTCGGTTGTCTTATAATCAATGCTTTTGGTTATTTCATTATAAACCTTGGAGCAGTTAGATTGAGAGGAACTGAGGAATCGTCGCAAAAATTCTTAAGTGATTGTAGCAATTGCTTGCAAGTATACGCAAGGGCAGATACATGTCATGCATAACTGGAGAATTTTTCTTGGCCCTTGAATCTTATTGAGTTAGATGCATGCCGGGACTAAATTCTAGTGTTGATGAAAATGTTGAGATCTAAGTTTTGTAGAAATACTAATGGATATTGATAAAAAAAAAAAAATTAATATTATGAGAAACCAGAATATATATAAACTTTAATTAAGCTATAAAGCATGTTTTTGCATGTATATTTCTATTAGTGATTTTTTAGGTTTTTGATATATTCAAATATTGATTACCCCTTAATATTGATGTCGACCCTCCATACAATATATCGATGGATGTATTGACGTGCCTACGACATTCCAATAGTTATATATGGCATTCAAAAGTTGAAAACTGCTTTTTGACCATTTGGAGGAATATCTGGCTTGAAGAAGTATAGAAGAAATTTTAGGGATGAGGAGAGGTCTTGGGGGAGTATTAATCTATTGTTAGGTTTAATACCTTCCTCGGTGTCAAAAAGTTCTATTGTTATCCTATGCTCCTTACTCTTCCTTACTCTTAACTAATCTATGTTTTCTGGATTGTGAATTCAGAACGATGGAGAGATTTCTAGTTGTTTAATGAAATGTATTTAACCATCTCATTATAGACAGCTTCAAAGTTGGACCTAATATTTTGTAGTTTTTATTAATTCCATTCTTTCTTTCTTACTATTATTGCGATGGAAATAGGTCAGAGTTTGGGATGTAACTGCATCATCGACTATCCGTTCATCATGTTGCGTTGGATTAACTTCTCTTCCTGGTGCTCCTATAAACATTAAGTGCCATGAATCCTTGCTCTATGCTGCTACAAGTTCCTCCGTTGTTGCTGTCGATTTAAGGACTATGCAGAAAGTTCTAACTGCTGCAGCTTATCAACCATTTCTATACTCATTCGAGATGATTCCCTCTAAATCCTTAATATGCACAGGTGGTAGAGGCAGGTACGTTCTAGTTCATTGATCAAGAGCAATGCTCATATGTCTAAACTTTATAATGTTTATTTTAGTGAATGGATTTTCAAAACATGACCATTTTTAGCATTTTAATGGATGGATGACATGATTTTAAATATGTATACTGTTGTGTTGACTTTAGGCATATATTGAAGCTGCTTAGGCTAGTTGAGTGAGACGGTAGAATACTGATGTCGACCCTCCATACAATATATCATGAAAGTTTAGGGATGGTTCATTCATACAATATATCGATGAAAGTGATGTTAGATGAACACGACTCTCCATAATGATATGACATCGTCCACTTTGAACATAAGTTCTCAGCTTTACTTTGGGCTTCTCCAAAAGGCCGCATACCAATGGAGATAGTATTCCTTGATTATAAACCCATGATCATTCCCTAAATTAGCTGATGTGAGACTTTCATCATCCAACAAGTGAGACGGTAGAATAAGTATTTTGAAAGTTTAGGGATGGTTATGAAATAAATCTAAGAGCTAGGAGATCAAATAGGTTTAAACTAAATGGATACTTTTTAGCTGTGCAGTGCAAGGCTTTGGGATGTAAGAAGAAACCAGGACGCTCTTAAACCTGAACCAATAGCTGAATTGGATGGACATAGAGGAGCAGTGAATTTCCTACACATGGATCCCTACAAAATAGTAACGGGATGTCCAGATAATGTCGATGTAAACGTCTGGGAGGCAGATTCGGGTGCACACGCAAATTCATTGAGCTGCTGGTTCACTGAAAGTGCGGACAGCAGCACTACATTGTCCTCTATGGCTGTTAATGGGTGTAGAGTTGTCACTGCCTGCTATGCTGAAGATCTGGGACTTCTACGCTGCAGGGACTACACCAATGCTTCTCGTCCCATTGTTAGACACGACGAGGTTGTCTCCAAATTTTGGGATTCACAATGCTACGACGACAACAACAACGATACCTCCGACGTGTAG

mRNA sequence

TGGCCGTGGTGTTGAAAGATTTGCAGGGAGGAGGGGAAGAGATCAAATTTGCAAAATCCAAGCAATATAGTTGCAGTCCATTTCCTGTCGGGGGTTTTGCTCTGTTGGAAGATTTTGGAAATTGTAAACCCTGCAAAACCAATCACCATCGCCATCGATGGACCAGAATCAGAGCTTGCCGACCGCCATTACCGACTTGAATGAAGATTCTCTGGCTCACTGCGCCACATTCCTCAACCTCCACGACATCTTCAATCTCGCCACCACCTGCAAATATCTCCGACAAGCAGCCTATTCCGAATCAATCTGGCAACGCCTTTTCAGGGAGCGATGGCAGCAACTATTACCGCCTCTTGATTCTTCCGTAGCTTCAGGAGGAGCTAGGGATGCGTACTTGGCTAGGCTTTCCGCTCTTCAACAGTTCAAGTTTGAAGATCCATTGGTTGTTGATATGTTGACCGAACCCGAGCCTTATAACCTTATGCTTTTGGATAGAGATGATGTATTTGTTTCCCGGGGCTCCTCAATTCGAATGATGAAAATCCCCAAAATTTTTGGCAGGAGTCATTCTCTTACCACTCTGAATGATCACAATGCGCGTATCACTTGTATGAGGTTGTTTCCCCTTACAGAAACTTCATTGTTTAGGAGTGAAGGGAAAAAATCTGGAAATTTTTTGGTAACTTCGAGTTCTGATCACTCGATCCGATTGTGGTGGAAGGGTTCTTGTCAGAAATGTTTTCGAGGTCATAGTGGCCCTGTTTCAACTCTATCAGATAAACTATTAGGTGATGGTAGTAGCAAAGTACTAGCCAGTGGAGGGGAAGATGGTACAGTTCGCCTTTGGTCTCTTGGTTCCAGTGGCAAGCGAGGCAAGAGTGCTTTAAAGGCTACACTACATGGACATGAGAAACCAATTAAGTTAATGTCAGTTGCAGGACATAAGACATCTCTTTTAGTGAGCATTGCAAGAGATTCCAAGGTCAGAGTTTGGGATGTAACTGCATCATCGACTATCCGTTCATCATGTTGCGTTGGATTAACTTCTCTTCCTGGTGCTCCTATAAACATTAAGTGCCATGAATCCTTGCTCTATGCTGCTACAAGTTCCTCCGTTGTTGCTGTCGATTTAAGGACTATGCAGAAAGTTCTAACTGCTGCAGCTTATCAACCATTTCTATACTCATTCGAGATGATTCCCTCTAAATCCTTAATATGCACAGGTGGTAGAGGCAGTGCAAGGCTTTGGGATGTAAGAAGAAACCAGGACGCTCTTAAACCTGAACCAATAGCTGAATTGGATGGACATAGAGGAGCAGTGAATTTCCTACACATGGATCCCTACAAAATAGTAACGGGATGTCCAGATAATGTCGATGTAAACGTCTGGGAGGCAGATTCGGGTGCACACGCAAATTCATTGAGCTGCTGGTTCACTGAAAGTGCGGACAGCAGCACTACATTGTCCTCTATGGCTGTTAATGGGTGTAGAGTTGTCACTGCCTGCTATGCTGAAGATCTGGGACTTCTACGCTGCAGGGACTACACCAATGCTTCTCGTCCCATTGTTAGACACGACGAGGTTGTCTCCAAATTTTGGGATTCACAATGCTACGACGACAACAACAACGATACCTCCGACGTGTAG

Coding sequence (CDS)

ATGGACCAGAATCAGAGCTTGCCGACCGCCATTACCGACTTGAATGAAGATTCTCTGGCTCACTGCGCCACATTCCTCAACCTCCACGACATCTTCAATCTCGCCACCACCTGCAAATATCTCCGACAAGCAGCCTATTCCGAATCAATCTGGCAACGCCTTTTCAGGGAGCGATGGCAGCAACTATTACCGCCTCTTGATTCTTCCGTAGCTTCAGGAGGAGCTAGGGATGCGTACTTGGCTAGGCTTTCCGCTCTTCAACAGTTCAAGTTTGAAGATCCATTGGTTGTTGATATGTTGACCGAACCCGAGCCTTATAACCTTATGCTTTTGGATAGAGATGATGTATTTGTTTCCCGGGGCTCCTCAATTCGAATGATGAAAATCCCCAAAATTTTTGGCAGGAGTCATTCTCTTACCACTCTGAATGATCACAATGCGCGTATCACTTGTATGAGGTTGTTTCCCCTTACAGAAACTTCATTGTTTAGGAGTGAAGGGAAAAAATCTGGAAATTTTTTGGTAACTTCGAGTTCTGATCACTCGATCCGATTGTGGTGGAAGGGTTCTTGTCAGAAATGTTTTCGAGGTCATAGTGGCCCTGTTTCAACTCTATCAGATAAACTATTAGGTGATGGTAGTAGCAAAGTACTAGCCAGTGGAGGGGAAGATGGTACAGTTCGCCTTTGGTCTCTTGGTTCCAGTGGCAAGCGAGGCAAGAGTGCTTTAAAGGCTACACTACATGGACATGAGAAACCAATTAAGTTAATGTCAGTTGCAGGACATAAGACATCTCTTTTAGTGAGCATTGCAAGAGATTCCAAGGTCAGAGTTTGGGATGTAACTGCATCATCGACTATCCGTTCATCATGTTGCGTTGGATTAACTTCTCTTCCTGGTGCTCCTATAAACATTAAGTGCCATGAATCCTTGCTCTATGCTGCTACAAGTTCCTCCGTTGTTGCTGTCGATTTAAGGACTATGCAGAAAGTTCTAACTGCTGCAGCTTATCAACCATTTCTATACTCATTCGAGATGATTCCCTCTAAATCCTTAATATGCACAGGTGGTAGAGGCAGTGCAAGGCTTTGGGATGTAAGAAGAAACCAGGACGCTCTTAAACCTGAACCAATAGCTGAATTGGATGGACATAGAGGAGCAGTGAATTTCCTACACATGGATCCCTACAAAATAGTAACGGGATGTCCAGATAATGTCGATGTAAACGTCTGGGAGGCAGATTCGGGTGCACACGCAAATTCATTGAGCTGCTGGTTCACTGAAAGTGCGGACAGCAGCACTACATTGTCCTCTATGGCTGTTAATGGGTGTAGAGTTGTCACTGCCTGCTATGCTGAAGATCTGGGACTTCTACGCTGCAGGGACTACACCAATGCTTCTCGTCCCATTGTTAGACACGACGAGGTTGTCTCCAAATTTTGGGATTCACAATGCTACGACGACAACAACAACGATACCTCCGACGTGTAG

Protein sequence

MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQQLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSRGSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSDHSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGKSALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPGAPINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGSARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHANSLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKFWDSQCYDDNNNDTSDV

Homology

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BLAST of CmoCh11G010560 vs. ExPASy Swiss-Prot
Match: Q8YV57 (Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=all2124 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.6e-09
Identity = 77/321 (23.99%), Postives = 138/321 (42.99%), Query Frame = 0


Query: 171  GNFLVTSSSDHSIRLW--WKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVR 230
            G  L ++SSDHSI+LW    G       GHS  V T+  +   DG  + +A+G ED TV+
Sbjct: 1167 GKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITV--RFSPDG--QTIAAGSEDKTVK 1226

Query: 231  LWSLGSSGKRGKSALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIR 290
            LW       R    L  TL+GH+  +  +S +    + L S + D  +++W +     ++
Sbjct: 1227 LW------HRQDGKLLKTLNGHQDWVNSLSFSPDGKT-LASASADKTIKLWRIADGKLVK 1286

Query: 291  SSCCVGLTSLPGA-----PINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYS 350
                    +L G       +N       + +A+  + + +  R   ++ T   +   +Y+
Sbjct: 1287 --------TLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYA 1346

Query: 351  FEMIPSKSLICTGG-RGSARLWDVRRNQDALKP--EPIAELDGHRG--AVNFLHMDPYKI 410
               +P  ++I +     + RLW         +P   P+  L G+ G  AV+FLH D   I
Sbjct: 1347 VNFLPDSNIIASASLDNTIRLWQ--------RPLISPLEVLAGNSGVYAVSFLH-DGSII 1406

Query: 411  VTGCPDNVDVNVWEADSGAHANSLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLL 470
             T   D  ++ +W +  G+   +L        + +    S    G  + +A   + + + 
Sbjct: 1407 ATAGADG-NIQLWHSQDGSLLKTL------PGNKAIYGISFTPQGDLIASANADKTVKIW 1451

Query: 471  RCRDYTNASRPIVRHDEVVSK 480
            R RD   A + ++ HD  V+K
Sbjct: 1467 RVRD-GKALKTLIGHDNEVNK 1451

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BLAST of CmoCh11G010560 vs. ExPASy Swiss-Prot
Match: Q6S7B0 (Transcription initiation factor TFIID subunit 5 OS=Arabidopsis thaliana OX=3702 GN=TAF5 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 4.4e-09
Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 172 NFLVTSSSDHSIRLW--WKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRL 231
           N++ T SSD ++RLW    G C + F GH   V +L+  +  DG  + +ASG EDGT+ +
Sbjct: 515 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLA--MSPDG--RYMASGDEDGTIMM 574

Query: 232 WSLGSSGKRGKSALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTI 288
           W L +      +     L GH   +  +S +G + SLL S + D  V++WDVT+S+ +
Sbjct: 575 WDLST------ARCITPLMGHNSCVWSLSYSG-EGSLLASGSADCTVKLWDVTSSTKL 621

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BLAST of CmoCh11G010560 vs. ExPASy Swiss-Prot
Match: P53699 (Cell division control protein 4 OS=Candida albicans OX=5476 GN=CDC4 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.7e-08
Identity = 68/283 (24.03%), Postives = 114/283 (40.28%), Query Frame = 0


Query: 168 KKSGNFLVTSSSDHSIRLW--WKGSCQKCFRGHSGPVSTLS---DKLLG---DGSSKV-- 227
           K +GN LVT S+D ++R+W    G C   FRGH+  +  L      ++G   DG   V  
Sbjct: 372 KYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCLDIIHPAVIGKNQDGEDIVFP 431

Query: 228 ----LASGGEDGTVRLWSL-----------GSSGKRGKSALKATLHGHEKPIKLMSVAGH 287
               L +G  D  + +W L              G+     L A L GH + ++ +S  G 
Sbjct: 432 EYPLLITGSRDHNIHVWKLPVVDDSQDYIETFEGEFDNPYLIAVLSGHTQSVRSISGYG- 491

Query: 288 KTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPGAPINIKCHESLLYAATSSSVVA 347
             ++++S + DS VRVWD+             L  +    I+   H    ++ +  S + 
Sbjct: 492 --NIIISGSYDSTVRVWDLLDDGHCTHVLQGHLDRVYSTAIDF--HSKTCFSGSMDSNIN 551

Query: 348 V---DLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGSARLWDVRRNQDALKPEPIA 407
           V   +   ++KVL   A    L     +    L+      + R+WD +        E  +
Sbjct: 552 VWNFETGELKKVLVGHA---SLVGLLDLVDDVLVSAAADATLRIWDAKTG------ELRS 611

Query: 408 ELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHANSL 423
           +L GH  A+     D  ++V+G      + +W  + G  A  L
Sbjct: 612 KLKGHGAAITCFEHDGLRVVSG--SEKMLKLWNVEKGTFARDL 638

[Close]

BLAST of CmoCh11G010560 vs. ExPASy Swiss-Prot
Match: Q8YTC2 (Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr2800 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.7e-08
Identity = 80/333 (24.02%), Postives = 131/333 (39.34%), Query Frame = 0


Query: 171  GNFLVTSSSDHSIRLW--WKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVR 230
            G  L + S D +I++W    G C K + GH+  V +++        SK+L SG  D T++
Sbjct: 822  GQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIA----YSPDSKILVSGSGDRTIK 881

Query: 231  LWSLGSSGKRGKSALKATLHGHEKPIKLMSVA-GHKTSLLVSIARDSKVRVWDVTASSTI 290
            LW   +           TLHGH    ++ SVA       L  ++ D  VR+W+      +
Sbjct: 882  LWDCQT------HICIKTLHGHTN--EVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCL 941

Query: 291  RSSCCVGLTSLPGAPINIKCHESLLYAATSSSVVAV-DLRTMQKVLTAAAYQPFLYSFEM 350
            ++    G T     P+       +L + ++   V + D +T + + +   +  F+Y    
Sbjct: 942  KA--WYGNTDW-ALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAF 1001

Query: 351  IP-SKSLICTGGRGSARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDN 410
             P S++L       S RLW++   Q     + + E      AV F H     I TG  D 
Sbjct: 1002 SPDSQTLASASTDSSVRLWNISTGQCF---QILLEHTDWVYAVVF-HPQGKIIATGSAD- 1061

Query: 411  VDVNVWEADSGAHANSLS------CWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLR 470
              V +W   +G    +LS           S D     S+ A    R+   C    +G+LR
Sbjct: 1062 CTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILR 1121

Query: 471  CRDYTNASRPIVRHDEVVS--------KFWDSQ 485
                   S     + E+++        K WD Q
Sbjct: 1122 GHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQ 1134

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BLAST of CmoCh11G010560 vs. ExPASy Swiss-Prot
Match: B6QC06 (Nuclear distribution protein nudF 2 OS=Talaromyces marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) OX=441960 GN=nudF-2 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.1e-07
Identity = 45/153 (29.41%), Postives = 73/153 (47.71%), Query Frame = 0


Query: 138 SLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSDHSIRLW-WK-GSCQKCF 197
           S  T   H   ITC+   P     +F S        L +SS D +I++W W+ G  ++  
Sbjct: 117 STRTFESHRDAITCIAFHP-----IFTS--------LASSSEDCTIKIWDWELGELERTL 176

Query: 198 RGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGKSALKATLHGHEKPIK 257
           +GH   V+ L     G   + +LAS   D TV+LW       +G + ++ TL GH+  + 
Sbjct: 177 KGHIRAVTGLD--FGGQKGNTLLASCSSDLTVKLW----DPSKGYANIR-TLSGHDHSVS 236

Query: 258 LMSVAGHKTSLLVSIARDSKVRVWDVTASSTIR 289
            +       +LLVS  RD+ +R+WDV+    ++
Sbjct: 237 AVRFLTSTENLLVSAGRDASIRIWDVSTGYCVK 249

[Close]

BLAST of CmoCh11G010560 vs. ExPASy TrEMBL
Match: A0A6J1ES54 (nuclear distribution protein nudF-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435472 PE=4 SV=1)

HSP 1 Score: 1001.9 bits (2589), Expect = 9.4e-289
Identity = 496/496 (100.00%), Postives = 496/496 (100.00%), Query Frame = 0


Query: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ 60
           MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ
Sbjct: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ 60

Query: 61  QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120
           QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR
Sbjct: 61  QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120

Query: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180
           GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD
Sbjct: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180

Query: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240
           HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK
Sbjct: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240

Query: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300
           SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG
Sbjct: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300

Query: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360
           APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS
Sbjct: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360

Query: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420
           ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN
Sbjct: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420

Query: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF 480
           SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF
Sbjct: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF 480

Query: 481 WDSQCYDDNNNDTSDV 497
           WDSQCYDDNNNDTSDV
Sbjct: 481 WDSQCYDDNNNDTSDV 496

[Close]

BLAST of CmoCh11G010560 vs. ExPASy TrEMBL
Match: A0A6J1EKG1 (nuclear distribution protein nudF-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435472 PE=4 SV=1)

HSP 1 Score: 877.1 bits (2265), Expect = 3.5e-251
Identity = 445/496 (89.72%), Postives = 445/496 (89.72%), Query Frame = 0


Query: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ 60
           MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTC                      
Sbjct: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTC---------------------- 60

Query: 61  QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120
                                        KFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR
Sbjct: 61  -----------------------------KFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120

Query: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180
           GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD
Sbjct: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180

Query: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240
           HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK
Sbjct: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240

Query: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300
           SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG
Sbjct: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300

Query: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360
           APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS
Sbjct: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360

Query: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420
           ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN
Sbjct: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420

Query: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF 480
           SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF
Sbjct: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF 445

Query: 481 WDSQCYDDNNNDTSDV 497
           WDSQCYDDNNNDTSDV
Sbjct: 481 WDSQCYDDNNNDTSDV 445

[Close]

BLAST of CmoCh11G010560 vs. ExPASy TrEMBL
Match: A0A6J1DGX1 (F-box/WD repeat-containing protein sel-10-like OS=Momordica charantia OX=3673 GN=LOC111019976 PE=4 SV=1)

HSP 1 Score: 816.6 bits (2108), Expect = 5.6e-233
Identity = 398/491 (81.06%), Postives = 432/491 (87.98%), Query Frame = 0


Query: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ 60
           MDQNQ+ P  ITDLNEDSLA CA FLNL DI N+A TCK LRQ AYS+SIWQ LFRERWQ
Sbjct: 1   MDQNQNSPITITDLNEDSLARCAEFLNLQDISNVARTCKSLRQVAYSDSIWQPLFRERWQ 60

Query: 61  QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120
            L+PPLDSSVASGGARDAYL+RL+ALQQFKFEDPLV DM T+ EPY LMLLDRDD+F+SR
Sbjct: 61  HLIPPLDSSVASGGARDAYLSRLTALQQFKFEDPLVADMCTQAEPYGLMLLDRDDIFMSR 120

Query: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180
           GSSI+MM+I K F RS SLTTL+DHNARITCMRLFPL  TSLFRSEG++S NFLVTSSSD
Sbjct: 121 GSSIQMMEIAKSFSRSVSLTTLSDHNARITCMRLFPLYXTSLFRSEGQRSENFLVTSSSD 180

Query: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240
           HSIR WWKGSCQ+CFRGH+GP+STLSDKLLGD SSKVLASGGEDGTVRLWSL SSGKRGK
Sbjct: 181 HSIRFWWKGSCQRCFRGHNGPISTLSDKLLGDDSSKVLASGGEDGTVRLWSLSSSGKRGK 240

Query: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300
           SAL  TLHGH +PIK +SVAGHKTSLLVSI+RDSKVRVWDVTASST RSSCCVGLTSL G
Sbjct: 241 SALMVTLHGHGRPIKSISVAGHKTSLLVSISRDSKVRVWDVTASSTARSSCCVGLTSLSG 300

Query: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360
            P+NIKCHESLLY  TSSSVVA+DLRTMQK  TAAAYQPFLYSFEM+PSKSLICTGGRGS
Sbjct: 301 VPVNIKCHESLLYVGTSSSVVAIDLRTMQKAFTAAAYQPFLYSFEMVPSKSLICTGGRGS 360

Query: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420
           A LWDVRRNQD  KP PIAEL+GHRG V+FLHMDPYKIVTG P ++ VN+WE DSG  AN
Sbjct: 361 AMLWDVRRNQDGHKPVPIAELEGHRGPVSFLHMDPYKIVTGGPGDIYVNIWEVDSGTQAN 420

Query: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF 480
           SLSCWF E A SSTTLSS AVNGCR+ TACY EDLGLLRCRDYT+ASRPI  H EV+S+F
Sbjct: 421 SLSCWFNEDAGSSTTLSSFAVNGCRIFTACYDEDLGLLRCRDYTSASRPIXEHGEVLSRF 480

Query: 481 WDSQCYDDNNN 492
           WD +CY D+NN
Sbjct: 481 WDPECYSDSNN 491

[Close]

BLAST of CmoCh11G010560 vs. ExPASy TrEMBL
Match: A0A6J1ES67 (transcription initiation factor TFIID subunit 5-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111435472 PE=4 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 3.0e-202
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ 60
           MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ
Sbjct: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ 60

Query: 61  QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120
           QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR
Sbjct: 61  QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120

Query: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180
           GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD
Sbjct: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180

Query: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240
           HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK
Sbjct: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240

Query: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300
           SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG
Sbjct: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300

Query: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRG 360
           APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRG
Sbjct: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRG 359

[Close]

BLAST of CmoCh11G010560 vs. ExPASy TrEMBL
Match: A0A7N2L0R8 (WD_REPEATS_REGION domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 1.1e-180
Identity = 326/495 (65.86%), Postives = 386/495 (77.98%), Query Frame = 0


Query: 3   QNQSLPTAITDLNEDSLAHCATFL-NLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQQ 62
           Q+ +  T ITD++EDSLAHCA +L NL D+ NLA +CKY ++ AYS SIW R FRE W Q
Sbjct: 12  QSTTTTTKITDVDEDSLAHCANYLDNLQDLSNLAMSCKYFKRVAYSNSIWLRWFREHWPQ 71

Query: 63  LLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSRG 122
             P   SS  +   R+AYLAR +ALQQFKF DPLV D+ T P+PYN +LL+++D   S+G
Sbjct: 72  QAP--SSSPQTLDVREAYLARRTALQQFKFMDPLVADIYTFPKPYNQILLEKNDFVFSQG 131

Query: 123 SSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSDH 182
           S I M KI      S SL  L+DH+ARITCMRLFPL ETSLFRSE +   N LVTSS DH
Sbjct: 132 SLIEMRKINCFLCESSSLLMLSDHSARITCMRLFPLNETSLFRSETQSEENVLVTSSCDH 191

Query: 183 SIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGKS 242
           +IRLWW+GSCQ+CFRGH+GPV+TLSDKLLGDG  KVLASGGEDGTVRLWSL SSGKRGKS
Sbjct: 192 TIRLWWRGSCQRCFRGHNGPVTTLSDKLLGDGIGKVLASGGEDGTVRLWSLNSSGKRGKS 251

Query: 243 ALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPGA 302
           ALKATL+GHEKP+KLMSVAGHKTSLLV+++RDSKVRVWD TASS++RSSCCVG+ SLPG+
Sbjct: 252 ALKATLYGHEKPVKLMSVAGHKTSLLVTLSRDSKVRVWDTTASSSVRSSCCVGMASLPGS 311

Query: 303 PINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGSA 362
           P+N+KCHESLLY AT SSV+A+DLRTM+KVLTAA YQP L+SFEM+PSKSLICTG  G A
Sbjct: 312 PVNMKCHESLLYVATGSSVIAIDLRTMRKVLTAANYQPKLHSFEMLPSKSLICTGVSGRA 371

Query: 363 RLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHANS 422
            LWD+RRNQ+   P PIAELDGH G+V F+HMDPYKIVTG P++  +NVWE D+G   NS
Sbjct: 372 LLWDIRRNQET-NPGPIAELDGHTGSVAFVHMDPYKIVTGGPEDFFINVWETDTGTQINS 431

Query: 423 LSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVR-HDEVVSKF 482
           LSC   E   S  T  ++AVNGCR+VT    E L  LR RD+ NA+ P+V+  DE  SKF
Sbjct: 432 LSCSSDEEPSSGCT--ALAVNGCRIVTGSCGEGLSRLRFRDFNNATCPVVKSEDEHASKF 491

Query: 483 WDSQCYDDNNNDTSD 496
           WD Q Y D++ D SD
Sbjct: 492 WDPQSYSDSDTDGSD 501

[Close]

BLAST of CmoCh11G010560 vs. NCBI nr
Match: XP_022928620.1 (nuclear distribution protein nudF-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1001.9 bits (2589), Expect = 1.9e-288
Identity = 496/496 (100.00%), Postives = 496/496 (100.00%), Query Frame = 0


Query: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ 60
           MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ
Sbjct: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ 60

Query: 61  QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120
           QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR
Sbjct: 61  QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120

Query: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180
           GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD
Sbjct: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180

Query: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240
           HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK
Sbjct: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240

Query: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300
           SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG
Sbjct: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300

Query: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360
           APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS
Sbjct: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360

Query: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420
           ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN
Sbjct: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420

Query: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF 480
           SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF
Sbjct: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF 480

Query: 481 WDSQCYDDNNNDTSDV 497
           WDSQCYDDNNNDTSDV
Sbjct: 481 WDSQCYDDNNNDTSDV 496

[Close]

BLAST of CmoCh11G010560 vs. NCBI nr
Match: XP_023530008.1 (uncharacterized protein LOC111792690 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 983.0 bits (2540), Expect = 9.3e-283
Identity = 487/496 (98.19%), Postives = 492/496 (99.19%), Query Frame = 0


Query: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ 60
           MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYS+SIWQRLFRERWQ
Sbjct: 109 MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSDSIWQRLFRERWQ 168

Query: 61  QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120
            LLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPY+LMLLDRDDVFVSR
Sbjct: 169 HLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYSLMLLDRDDVFVSR 228

Query: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180
           GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD
Sbjct: 229 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 288

Query: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240
           HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK
Sbjct: 289 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 348

Query: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300
           SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG
Sbjct: 349 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 408

Query: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360
           APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS
Sbjct: 409 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 468

Query: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420
           ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVW+ADSGAHAN
Sbjct: 469 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWKADSGAHAN 528

Query: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF 480
           SLSCWFTES DSSTTLSSMAVNGCR+VTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF
Sbjct: 529 SLSCWFTESTDSSTTLSSMAVNGCRIVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF 588

Query: 481 WDSQCYDDNNNDTSDV 497
           WDSQCYDD +ND SDV
Sbjct: 589 WDSQCYDD-DNDNSDV 603

[Close]

BLAST of CmoCh11G010560 vs. NCBI nr
Match: KAG7022229.1 (hypothetical protein SDJN02_15959 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 976.9 bits (2524), Expect = 6.7e-281
Identity = 487/496 (98.19%), Postives = 489/496 (98.59%), Query Frame = 0


Query: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ 60
           MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYS+SIWQRLFRERWQ
Sbjct: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSDSIWQRLFRERWQ 60

Query: 61  QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120
            LLP LDSSVASGGAR+AYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR
Sbjct: 61  HLLPLLDSSVASGGAREAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120

Query: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180
           GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPL ETSLFRSEGKKSGNFLVTSSSD
Sbjct: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLAETSLFRSEGKKSGNFLVTSSSD 180

Query: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240
           HSIRLWWK    KCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK
Sbjct: 181 HSIRLWWK----KCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240

Query: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300
           SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG
Sbjct: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300

Query: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360
           APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS
Sbjct: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360

Query: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420
           ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN
Sbjct: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420

Query: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF 480
           SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF
Sbjct: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF 480

Query: 481 WDSQCYDDNNNDTSDV 497
           WDSQCYDDNNNDTSDV
Sbjct: 481 WDSQCYDDNNNDTSDV 492

[Close]

BLAST of CmoCh11G010560 vs. NCBI nr
Match: KAG6588383.1 (F-box/WD repeat-containing protein sel-10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 947.2 bits (2447), Expect = 5.7e-272
Identity = 470/475 (98.95%), Postives = 472/475 (99.37%), Query Frame = 0


Query: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ 60
           MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYS+SIWQRLFRERWQ
Sbjct: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSDSIWQRLFRERWQ 60

Query: 61  QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120
            LLP LDSSVASGGAR+AYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR
Sbjct: 61  HLLPLLDSSVASGGAREAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120

Query: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180
           GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPL ETSLFRSEGKKSGNFLVTSSSD
Sbjct: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLAETSLFRSEGKKSGNFLVTSSSD 180

Query: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240
           HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK
Sbjct: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240

Query: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300
           SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG
Sbjct: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300

Query: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360
           APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS
Sbjct: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360

Query: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420
           ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN
Sbjct: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420

Query: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDE 476
           SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDE
Sbjct: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDE 475

[Close]

BLAST of CmoCh11G010560 vs. NCBI nr
Match: XP_022928627.1 (nuclear distribution protein nudF-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 877.1 bits (2265), Expect = 7.2e-251
Identity = 445/496 (89.72%), Postives = 445/496 (89.72%), Query Frame = 0


Query: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTCKYLRQAAYSESIWQRLFRERWQ 60
           MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTC                      
Sbjct: 1   MDQNQSLPTAITDLNEDSLAHCATFLNLHDIFNLATTC---------------------- 60

Query: 61  QLLPPLDSSVASGGARDAYLARLSALQQFKFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120
                                        KFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR
Sbjct: 61  -----------------------------KFEDPLVVDMLTEPEPYNLMLLDRDDVFVSR 120

Query: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180
           GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD
Sbjct: 121 GSSIRMMKIPKIFGRSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSD 180

Query: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240
           HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK
Sbjct: 181 HSIRLWWKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGK 240

Query: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300
           SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG
Sbjct: 241 SALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTIRSSCCVGLTSLPG 300

Query: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360
           APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS
Sbjct: 301 APINIKCHESLLYAATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS 360

Query: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420
           ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN
Sbjct: 361 ARLWDVRRNQDALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWEADSGAHAN 420

Query: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF 480
           SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF
Sbjct: 421 SLSCWFTESADSSTTLSSMAVNGCRVVTACYAEDLGLLRCRDYTNASRPIVRHDEVVSKF 445

Query: 481 WDSQCYDDNNNDTSDV 497
           WDSQCYDDNNNDTSDV
Sbjct: 481 WDSQCYDDNNNDTSDV 445

[Close]

BLAST of CmoCh11G010560 vs. TAIR 10
Match: AT5G25150.1 (TBP-associated factor 5 )

HSP 1 Score: 64.3 bits (155), Expect = 3.1e-10
Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 172 NFLVTSSSDHSIRLW--WKGSCQKCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRL 231
           N++ T SSD ++RLW    G C + F GH   V +L+  +  DG  + +ASG EDGT+ +
Sbjct: 515 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLA--MSPDG--RYMASGDEDGTIMM 574

Query: 232 WSLGSSGKRGKSALKATLHGHEKPIKLMSVAGHKTSLLVSIARDSKVRVWDVTASSTI 288
           W L +      +     L GH   +  +S +G + SLL S + D  V++WDVT+S+ +
Sbjct: 575 WDLST------ARCITPLMGHNSCVWSLSYSG-EGSLLASGSADCTVKLWDVTSSTKL 621

[Close]

BLAST of CmoCh11G010560 vs. TAIR 10
Match: AT5G23430.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 2.2e-08
Identity = 72/319 (22.57%), Postives = 127/319 (39.81%), Query Frame = 0


Query: 135 RSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSDHSIRLW--WKGSCQ 194
           R++ L     H+A + C+++            G+KS   LVT   DH + LW   K +  
Sbjct: 5   RAYKLQEFVAHSAAVNCLKI------------GRKSSRVLVTGGEDHKVNLWAIGKPNAI 64

Query: 195 KCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGKSALKATLHGHEK 254
               GHS  +    D +  D S  ++A+G   GT++LW L       ++ +  TL GH  
Sbjct: 65  LSLYGHSSGI----DSVTFDASEVLVAAGAASGTIKLWDL------EEAKIVRTLTGHRS 124

Query: 255 PIKLMSVAGHK-TSLLVSIARDSKVRVWDVTASSTIRS--SCCVGLTSLPGAPINIKCHE 314
               +SV  H       S + D+ +++WD+     I +      G+  L   P       
Sbjct: 125 --NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP-----DG 184

Query: 315 SLLYAATSSSVVAVDLRTMQKVLTA-AAYQPFLYSFEMIPSKSLICTGGRG-SARLWDVR 374
             + +    ++V V   T  K+LT   +++  + S +  P + L+ TG    + + WD+ 
Sbjct: 185 RWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLE 244

Query: 375 RNQ--------------DALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWE- 430
             +               +  P+    L G + ++     +P +    C D VDV  W  
Sbjct: 245 TFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWEPIR----CHDGVDVG-WSR 289

[Close]

BLAST of CmoCh11G010560 vs. TAIR 10
Match: AT5G23430.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 2.2e-08
Identity = 72/319 (22.57%), Postives = 127/319 (39.81%), Query Frame = 0


Query: 135 RSHSLTTLNDHNARITCMRLFPLTETSLFRSEGKKSGNFLVTSSSDHSIRLW--WKGSCQ 194
           R++ L     H+A + C+++            G+KS   LVT   DH + LW   K +  
Sbjct: 5   RAYKLQEFVAHSAAVNCLKI------------GRKSSRVLVTGGEDHKVNLWAIGKPNAI 64

Query: 195 KCFRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGKSALKATLHGHEK 254
               GHS  +    D +  D S  ++A+G   GT++LW L       ++ +  TL GH  
Sbjct: 65  LSLYGHSSGI----DSVTFDASEVLVAAGAASGTIKLWDL------EEAKIVRTLTGHRS 124

Query: 255 PIKLMSVAGHK-TSLLVSIARDSKVRVWDVTASSTIRS--SCCVGLTSLPGAPINIKCHE 314
               +SV  H       S + D+ +++WD+     I +      G+  L   P       
Sbjct: 125 --NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP-----DG 184

Query: 315 SLLYAATSSSVVAVDLRTMQKVLTA-AAYQPFLYSFEMIPSKSLICTGGRG-SARLWDVR 374
             + +    ++V V   T  K+LT   +++  + S +  P + L+ TG    + + WD+ 
Sbjct: 185 RWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLE 244

Query: 375 RNQ--------------DALKPEPIAELDGHRGAVNFLHMDPYKIVTGCPDNVDVNVWE- 430
             +               +  P+    L G + ++     +P +    C D VDV  W  
Sbjct: 245 TFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWEPIR----CHDGVDVG-WSR 289

[Close]

BLAST of CmoCh11G010560 vs. TAIR 10
Match: AT1G11160.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-07
Identity = 58/225 (25.78%), Postives = 99/225 (44.00%), Query Frame = 0


Query: 195 FRGHSGPVSTLSDKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGKSALKATLHGHEKPI 254
           F  HSG V+ LS   +G  +S++L +GG+D  V LWS+      GK+    +L GH  P+
Sbjct: 11  FVAHSGNVNCLS---IGKKTSRLLLTGGDDYKVNLWSI------GKTTSPMSLCGHTSPV 70

Query: 255 KLMSVAGHKTSLLVSIARDSKV-RVWDVTASSTIRSSCCVGLTSLPGAPINIKCHESLLY 314
              SVA +   +LV     S V ++WD+  S  +R+    G  S   A       E L  
Sbjct: 71  D--SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRA--FTGHRSNCSAVEFHPFGEFLAS 130

Query: 315 AATSSSVVAVDLRTMQKVLTAAAYQPFLYSFEMIPSKSLICTGGRGS-ARLWDVRRNQDA 374
            ++ +++   D R    + T   +   + + E  P    + +GG  +  ++WD+      
Sbjct: 131 GSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAG--- 190

Query: 375 LKPEPIAELDGHRGAVNFLHMDP--YKIVTGCPDNVDVNVWEADS 416
              + + E   H G +  L   P  + + TG  D   V  W+ ++
Sbjct: 191 ---KLLHEFKCHEGPIRSLDFHPLEFLLATGSADRT-VKFWDLET 215

[Close]

BLAST of CmoCh11G010560 vs. TAIR 10
Match: AT5G16750.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.9e-07
Identity = 38/135 (28.15%), Postives = 63/135 (46.67%), Query Frame = 0


Query: 149 ITCMRLFPLTETSLFRSEGKKSGNFLVTSSSDHSIRLW--WKGSCQKCFRGHSGPVSTLS 208
           + C+R +   E  +       SG  L T+ +D  + +W    G C   FRGH G VS++ 
Sbjct: 92  LKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSI- 151

Query: 209 DKLLGDGSSKVLASGGEDGTVRLWSLGSSGKRGKSALKATLHGHEKPIKLMSVAGHKTSL 268
                D +  +L SG +D TVR+W L  + K  +    A +  H   +  ++++    +L
Sbjct: 152 -LFHPDSNKNILISGSDDATVRVWDL--NAKNTEKKCLAIMEKHFSAVTSIALSEDGLTL 211

Query: 269 LVSIARDSKVRVWDV 282
             S  RD  V +WD+
Sbjct: 212 F-SAGRDKVVNLWDL 221

The following BLAST results are available for this feature:

BLAST of CmoCh11G010560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8YV57	2.6e-09	23.99	Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp. (strain PCC 7...	[more]
Q6S7B0	4.4e-09	35.59	Transcription initiation factor TFIID subunit 5 OS=Arabidopsis thaliana OX=3702 ...	[more]
P53699	1.7e-08	24.03	Cell division control protein 4 OS=Candida albicans OX=5476 GN=CDC4 PE=3 SV=1	[more]
Q8YTC2	1.7e-08	24.02	Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7...	[more]
B6QC06	1.1e-07	29.41	Nuclear distribution protein nudF 2 OS=Talaromyces marneffei (strain ATCC 18224 ...	[more]

BLAST of CmoCh11G010560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ES54	9.4e-289	100.00	nuclear distribution protein nudF-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1EKG1	3.5e-251	89.72	nuclear distribution protein nudF-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1DGX1	5.6e-233	81.06	F-box/WD repeat-containing protein sel-10-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1ES67	3.0e-202	100.00	transcription initiation factor TFIID subunit 5-like isoform X3 OS=Cucurbita mos...	[more]
A0A7N2L0R8	1.1e-180	65.86	WD_REPEATS_REGION domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of CmoCh11G010560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928620.1	1.9e-288	100.00	nuclear distribution protein nudF-like isoform X1 [Cucurbita moschata]	[more]
XP_023530008.1	9.3e-283	98.19	uncharacterized protein LOC111792690 [Cucurbita pepo subsp. pepo]	[more]
KAG7022229.1	6.7e-281	98.19	hypothetical protein SDJN02_15959 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6588383.1	5.7e-272	98.95	F-box/WD repeat-containing protein sel-10, partial [Cucurbita argyrosperma subsp...	[more]
XP_022928627.1	7.2e-251	89.72	nuclear distribution protein nudF-like isoform X2 [Cucurbita moschata]	[more]

BLAST of CmoCh11G010560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25150.1	3.1e-10	35.59	TBP-associated factor 5	[more]
AT5G23430.1	2.2e-08	22.57	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G23430.2	2.2e-08	22.57	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G11160.1	1.1e-07	25.78	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G16750.1	1.9e-07	28.15	Transducin family protein / WD-40 repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 174..188 score: 33.83 coord: 267..281 score: 34.66 coord: 218..232 score: 41.15
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 188..231 e-value: 2.9E-4 score: 30.2 coord: 135..187 e-value: 9.2E-4 score: 28.5 coord: 240..280 e-value: 8.9E-4 score: 28.6 coord: 374..412 e-value: 0.04 score: 23.1 coord: 327..365 e-value: 61.0 score: 5.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 245..280 e-value: 0.14 score: 13.0 coord: 139..186 e-value: 0.003 score: 18.4 coord: 189..231 e-value: 1.1E-6 score: 29.2
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 247..289 score: 11.711506
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 170..186 score: 8.603614
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 195..232 score: 9.906923
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 305..459 e-value: 1.0E-11 score: 46.7
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 113..304 e-value: 6.0E-25 score: 90.0
None	No IPR available	GENE3D	1.20.1280.50		coord: 3..90 e-value: 2.5E-6 score: 29.3
None	No IPR available	PANTHER	PTHR22847	WD40 REPEAT PROTEIN	coord: 12..486
None	No IPR available	PANTHER	PTHR22847:SF699	E3 UBIQUITIN LIGASE COMPLEX SCF SUBUNIT SCONB-RELATED	coord: 12..486
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 247..281 score: 8.623787
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 267..281
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 139..450
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 10..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G010560.1	CmoCh11G010560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding