CmoCh11G010140 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G010140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr11: 5514798 .. 5515487 (-)
RNA-Seq Expression	CmoCh11G010140
Synteny	CmoCh11G010140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCACCTTCATTGCTTGAACCCCATCCATTGAAATGGAACCAATTCCCAGTTCATTTCGTCCATTCTCCTTCTCCATCAACGAGTGGTCGCTGTCATCTCTACAGACCCTTTGTTCTACCCAAGAATTTGAGAATGGGTGGGTCTAGCTCTGTCAAATTCGGTGTTAGATGCTTCTTTTCCAAGGAGGGGGGGAAGAGTTTGACAACTTCGAATTCCAGGTTGGAGCGATTGGTCGATGGAGATAAACCCAAAAGGCCAATGGAGGTAATTGCCAATTCGATTATGAATGCTCTCATGGCGTTGCGGAAGCCTGCGATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCTAATTCTGCGTTAGCCGCTTCTGGTGGACGTGTTGGAGGAAGTGCGTTTTCGTCGCGCTCGTCTTCGTCTTCGAGGAGTTACTCAACTCCGTCGATGATTTCTGGTTATTCATATTCTGCGCCTTATAGTTCGCCGTCGTTGTTTGGCGGCGGCGGGATTTACGTTGGGCCGGCGGTTGGGGTCGGAGTCGGTGCCGGATCAAGTTTTTTCTTCATATTGGCTGGTTTCGCGGCGTTTCTTCTGGTTTCGGGATTTCTCTCCGATCGGTCCGATAGTAGTGTTCTCACTGCTTCTGAGAAAACTAGCGTGCTTAAACTTCAAGTATGA

mRNA sequence

ATGGTTTCACCTTCATTGCTTGAACCCCATCCATTGAAATGGAACCAATTCCCAGTTCATTTCGTCCATTCTCCTTCTCCATCAACGAGTGGTCGCTGTCATCTCTACAGACCCTTTGTTCTACCCAAGAATTTGAGAATGGGTGGGTCTAGCTCTGTCAAATTCGGTGTTAGATGCTTCTTTTCCAAGGAGGGGGGGAAGAGTTTGACAACTTCGAATTCCAGGTTGGAGCGATTGGTCGATGGAGATAAACCCAAAAGGCCAATGGAGGTAATTGCCAATTCGATTATGAATGCTCTCATGGCGTTGCGGAAGCCTGCGATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCTAATTCTGCGTTAGCCGCTTCTGGTGGACGTGTTGGAGGAAGTGCGTTTTCGTCGCGCTCGTCTTCGTCTTCGAGGAGTTACTCAACTCCGTCGATGATTTCTGGTTATTCATATTCTGCGCCTTATAGTTCGCCGTCGTTGTTTGGCGGCGGCGGGATTTACGTTGGGCCGGCGGTTGGGGTCGGAGTCGGTGCCGGATCAAGTTTTTTCTTCATATTGGCTGGTTTCGCGGCGTTTCTTCTGGTTTCGGGATTTCTCTCCGATCGGTCCGATAGTAGTGTTCTCACTGCTTCTGAGAAAACTAGCGTGCTTAAACTTCAAGTATGA

Coding sequence (CDS)

ATGGTTTCACCTTCATTGCTTGAACCCCATCCATTGAAATGGAACCAATTCCCAGTTCATTTCGTCCATTCTCCTTCTCCATCAACGAGTGGTCGCTGTCATCTCTACAGACCCTTTGTTCTACCCAAGAATTTGAGAATGGGTGGGTCTAGCTCTGTCAAATTCGGTGTTAGATGCTTCTTTTCCAAGGAGGGGGGGAAGAGTTTGACAACTTCGAATTCCAGGTTGGAGCGATTGGTCGATGGAGATAAACCCAAAAGGCCAATGGAGGTAATTGCCAATTCGATTATGAATGCTCTCATGGCGTTGCGGAAGCCTGCGATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCTAATTCTGCGTTAGCCGCTTCTGGTGGACGTGTTGGAGGAAGTGCGTTTTCGTCGCGCTCGTCTTCGTCTTCGAGGAGTTACTCAACTCCGTCGATGATTTCTGGTTATTCATATTCTGCGCCTTATAGTTCGCCGTCGTTGTTTGGCGGCGGCGGGATTTACGTTGGGCCGGCGGTTGGGGTCGGAGTCGGTGCCGGATCAAGTTTTTTCTTCATATTGGCTGGTTTCGCGGCGTTTCTTCTGGTTTCGGGATTTCTCTCCGATCGGTCCGATAGTAGTGTTCTCACTGCTTCTGAGAAAACTAGCGTGCTTAAACTTCAAGTATGA

Protein sequence

MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCFFSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYDPNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV

Homology

[Close]

BLAST of CmoCh11G010140 vs. ExPASy TrEMBL
Match: A0A6J1F3H3 (uncharacterized protein LOC111439711 OS=Cucurbita moschata OX=3662 GN=LOC111439711 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 6.8e-117
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF 60
           MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF
Sbjct: 1   MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF 60

Query: 61  FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD 120
           FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD
Sbjct: 61  FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD 120

Query: 121 PNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGPAV 180
           PNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGPAV
Sbjct: 121 PNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGPAV 180

Query: 181 GVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           GVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV
Sbjct: 181 GVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 229

[Close]

BLAST of CmoCh11G010140 vs. ExPASy TrEMBL
Match: A0A6J1HS29 (uncharacterized protein LOC111465613 OS=Cucurbita maxima OX=3661 GN=LOC111465613 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.7e-107
Identity = 220/233 (94.42%), Postives = 223/233 (95.71%), Query Frame = 0


Query: 1   MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF 60
           MVSPSLLEPHPLKWNQFPVHFV SPSPSTSGRCHLYRPF+LPKNLR GGSSSVKFGVR F
Sbjct: 1   MVSPSLLEPHPLKWNQFPVHFVQSPSPSTSGRCHLYRPFILPKNLRTGGSSSVKFGVRGF 60

Query: 61  FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD 120
           FSKE GKSLTTSNSRLERLVDGDKPKRPM VIANSIM+AL ALRKPAIAAVLLGLLLMY+
Sbjct: 61  FSKE-GKSLTTSNSRLERLVDGDKPKRPMAVIANSIMDALKALRKPAIAAVLLGLLLMYN 120

Query: 121 PNSALAASGGRVGGSAFSSR----SSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYV 180
           PNSALAASGGRVGGSAFSSR    SSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYV
Sbjct: 121 PNSALAASGGRVGGSAFSSRSSSSSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYV 180

Query: 181 GPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           GPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV
Sbjct: 181 GPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 232

[Close]

BLAST of CmoCh11G010140 vs. ExPASy TrEMBL
Match: A0A5A7V6K8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00940 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.6e-92
Identity = 193/231 (83.55%), Postives = 208/231 (90.04%), Query Frame = 0


Query: 1   MVSPSLLEPHPLKWNQ-FPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRC 60
           MVS SLLEPHPLKWN+ FP+HF  SPSPSTSGR HLYRPF++P+NL++  SSSVK  VRC
Sbjct: 33  MVSASLLEPHPLKWNKTFPLHFASSPSPSTSGRYHLYRPFIVPRNLKIHDSSSVKSRVRC 92

Query: 61  FFSKEGGKSLTT-SNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLM 120
           FFS++G  S TT SNS    LV+GDKPK PMEVI NSI+NAL  LRKPAIAAVLLGLLLM
Sbjct: 93  FFSEKGRSSTTTISNSCSVELVNGDKPKSPMEVIGNSIINALKTLRKPAIAAVLLGLLLM 152

Query: 121 YDPNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGP 180
           YDPNSALAASGGRVGG+AFSSRSSSSSRSYSTP M SG+SYSAPY+SPS+FGGGGIYVGP
Sbjct: 153 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 212

Query: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV
Sbjct: 213 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 263

[Close]

BLAST of CmoCh11G010140 vs. ExPASy TrEMBL
Match: A0A1S4E5D0 (uncharacterized protein LOC103503226 OS=Cucumis melo OX=3656 GN=LOC103503226 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 7.6e-92
Identity = 192/230 (83.48%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 1   MVSPSLLEPHPLKWNQ-FPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRC 60
           MVS SLLEPHPLKWN+ FP+HF  SPSPSTSGR HLYRPF++P+NL++  SSSVK  VRC
Sbjct: 1   MVSASLLEPHPLKWNKTFPLHFASSPSPSTSGRYHLYRPFIVPRNLKIHDSSSVKSRVRC 60

Query: 61  FFSKEGGKSLTT-SNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLM 120
           FFS++G  S TT SNS    LV+GDKPK PMEVI NSI+NAL  LRKPAIAAVLLGLLLM
Sbjct: 61  FFSEKGRSSTTTISNSCSVELVNGDKPKSPMEVIGNSIINALKTLRKPAIAAVLLGLLLM 120

Query: 121 YDPNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGP 180
           YDPNSALAASGGRVGG+AFSSRSSSSSRSYSTP M SG+SYSAPY+SPS+FGGGGIYVGP
Sbjct: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180

Query: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQ 229
           AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQ
Sbjct: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQ 230

[Close]

BLAST of CmoCh11G010140 vs. ExPASy TrEMBL
Match: A0A5D3E2D5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3607G00320 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.7e-91
Identity = 192/231 (83.12%), Postives = 208/231 (90.04%), Query Frame = 0


Query: 1   MVSPSLLEPHPLKWNQ-FPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRC 60
           MVS SLLEPHPLKWN+ FP+HF  SPSPSTSG  HLYRPF++P+NL++  SSSVK  VRC
Sbjct: 1   MVSASLLEPHPLKWNKTFPLHFASSPSPSTSGGYHLYRPFIVPRNLKIHDSSSVKSRVRC 60

Query: 61  FFSKEGGKSLTT-SNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLM 120
           FFS++G  S T+ SNS    LV+GDKPK PMEVI NSI+NAL ALRKPAIAAVLLGLLLM
Sbjct: 61  FFSEKGRSSTTSISNSCSVELVNGDKPKSPMEVIGNSIINALKALRKPAIAAVLLGLLLM 120

Query: 121 YDPNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGP 180
           YDPNSALAASGGRVGG+AFSSRSSSSSRSYSTP M SG+SYSAPY+SPS+FGGGGIYVGP
Sbjct: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180

Query: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV
Sbjct: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 231

[Close]

BLAST of CmoCh11G010140 vs. NCBI nr
Match: XP_022933023.1 (uncharacterized protein LOC111439711 [Cucurbita moschata])

HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF 60
           MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF
Sbjct: 1   MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF 60

Query: 61  FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD 120
           FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD
Sbjct: 61  FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD 120

Query: 121 PNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGPAV 180
           PNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGPAV
Sbjct: 121 PNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGPAV 180

Query: 181 GVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           GVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV
Sbjct: 181 GVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 229

[Close]

BLAST of CmoCh11G010140 vs. NCBI nr
Match: XP_023531004.1 (uncharacterized protein LOC111793389 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.9 bits (1091), Expect = 4.5e-115
Identity = 226/229 (98.69%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF 60
           MVSPSLLEPHPLKWN+FPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF
Sbjct: 1   MVSPSLLEPHPLKWNRFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF 60

Query: 61  FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD 120
           FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNAL ALRKPAIAAVLLGLLLMYD
Sbjct: 61  FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALKALRKPAIAAVLLGLLLMYD 120

Query: 121 PNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGPAV 180
           PNSALAASGGRVGGS+FSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGPAV
Sbjct: 121 PNSALAASGGRVGGSSFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGPAV 180

Query: 181 GVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           GVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV
Sbjct: 181 GVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 229

[Close]

BLAST of CmoCh11G010140 vs. NCBI nr
Match: KAG7020889.1 (hypothetical protein SDJN02_17577 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.9 bits (1078), Expect = 1.5e-113
Identity = 227/231 (98.27%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF 60
           MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF
Sbjct: 1   MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF 60

Query: 61  FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD 120
           FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD
Sbjct: 61  FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD 120

Query: 121 PNSALAASGGRVGGSAFSSR--SSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGP 180
           PNSALAASGGRVGGSAFSSR  SSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVG 
Sbjct: 121 PNSALAASGGRVGGSAFSSRSSSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGL 180

Query: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTAS+KTSVLKLQV
Sbjct: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASDKTSVLKLQV 231

[Close]

BLAST of CmoCh11G010140 vs. NCBI nr
Match: XP_022965854.1 (uncharacterized protein LOC111465613 [Cucurbita maxima])

HSP 1 Score: 398.7 bits (1023), Expect = 3.5e-107
Identity = 220/233 (94.42%), Postives = 223/233 (95.71%), Query Frame = 0


Query: 1   MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF 60
           MVSPSLLEPHPLKWNQFPVHFV SPSPSTSGRCHLYRPF+LPKNLR GGSSSVKFGVR F
Sbjct: 1   MVSPSLLEPHPLKWNQFPVHFVQSPSPSTSGRCHLYRPFILPKNLRTGGSSSVKFGVRGF 60

Query: 61  FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD 120
           FSKE GKSLTTSNSRLERLVDGDKPKRPM VIANSIM+AL ALRKPAIAAVLLGLLLMY+
Sbjct: 61  FSKE-GKSLTTSNSRLERLVDGDKPKRPMAVIANSIMDALKALRKPAIAAVLLGLLLMYN 120

Query: 121 PNSALAASGGRVGGSAFSSR----SSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYV 180
           PNSALAASGGRVGGSAFSSR    SSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYV
Sbjct: 121 PNSALAASGGRVGGSAFSSRSSSSSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYV 180

Query: 181 GPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           GPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV
Sbjct: 181 GPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 232

[Close]

BLAST of CmoCh11G010140 vs. NCBI nr
Match: KAA0062597.1 (uncharacterized protein E6C27_scaffold79G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 348.2 bits (892), Expect = 5.4e-92
Identity = 193/231 (83.55%), Postives = 208/231 (90.04%), Query Frame = 0


Query: 1   MVSPSLLEPHPLKWNQ-FPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRC 60
           MVS SLLEPHPLKWN+ FP+HF  SPSPSTSGR HLYRPF++P+NL++  SSSVK  VRC
Sbjct: 33  MVSASLLEPHPLKWNKTFPLHFASSPSPSTSGRYHLYRPFIVPRNLKIHDSSSVKSRVRC 92

Query: 61  FFSKEGGKSLTT-SNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLM 120
           FFS++G  S TT SNS    LV+GDKPK PMEVI NSI+NAL  LRKPAIAAVLLGLLLM
Sbjct: 93  FFSEKGRSSTTTISNSCSVELVNGDKPKSPMEVIGNSIINALKTLRKPAIAAVLLGLLLM 152

Query: 121 YDPNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGP 180
           YDPNSALAASGGRVGG+AFSSRSSSSSRSYSTP M SG+SYSAPY+SPS+FGGGGIYVGP
Sbjct: 153 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 212

Query: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV
Sbjct: 213 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 263

[Close]

BLAST of CmoCh11G010140 vs. TAIR 10
Match: AT1G54520.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). )

HSP 1 Score: 152.1 bits (383), Expect = 5.3e-37
Identity = 119/236 (50.42%), Postives = 140/236 (59.32%), Query Frame = 0


Query: 3   SPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCFFS 62
           S + LE  P +WNQ        P P T  R H     +  K  R   S  ++  V+   S
Sbjct: 4   SSTFLELTPFQWNQ--------PLPYTQ-RPHHRTVLLYSKPQRRSNSIRLQISVKYKQS 63

Query: 63  KEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYDPN 122
                    SN              P E IA  +  AL +L+KPAIAAVLLGLLL YDPN
Sbjct: 64  TSSSDPDLRSNF------------NPFEQIAIQVKKALDSLKKPAIAAVLLGLLLFYDPN 123

Query: 123 SALAASGGRVGGSAFSSR----SSSSSRSYSTPSMIS-GYSYS---APYSSPSLFGGGGI 182
           SALAASGGR+GG++FSSR    SSSSS+SYS P   +  +SYS   APY  PS FGGG  
Sbjct: 124 SALAASGGRIGGNSFSSRSRSSSSSSSQSYSVPRTSNPSFSYSARTAPYYGPSPFGGG-- 183

Query: 183 YVGPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRS-DSSVLTASEKTSVLKLQV 230
           +VGPAVG G G  SSF  IL GFAAF+LVSGFLSDRS D S+LT ++KTSV+KLQV
Sbjct: 184 FVGPAVGFGFGGFSSFSLILVGFAAFVLVSGFLSDRSQDDSILTDTQKTSVIKLQV 216

The following BLAST results are available for this feature:

BLAST of CmoCh11G010140 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh11G010140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3H3	6.8e-117	100.00	uncharacterized protein LOC111439711 OS=Cucurbita moschata OX=3662 GN=LOC1114397...	[more]
A0A6J1HS29	1.7e-107	94.42	uncharacterized protein LOC111465613 OS=Cucurbita maxima OX=3661 GN=LOC111465613...	[more]
A0A5A7V6K8	2.6e-92	83.55	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S4E5D0	7.6e-92	83.48	uncharacterized protein LOC103503226 OS=Cucumis melo OX=3656 GN=LOC103503226 PE=...	[more]
A0A5D3E2D5	1.7e-91	83.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmoCh11G010140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933023.1	1.4e-116	100.00	uncharacterized protein LOC111439711 [Cucurbita moschata]	[more]
XP_023531004.1	4.5e-115	98.69	uncharacterized protein LOC111793389 [Cucurbita pepo subsp. pepo]	[more]
KAG7020889.1	1.5e-113	98.27	hypothetical protein SDJN02_17577 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022965854.1	3.5e-107	94.42	uncharacterized protein LOC111465613 [Cucurbita maxima]	[more]
KAA0062597.1	5.4e-92	83.55	uncharacterized protein E6C27_scaffold79G00940 [Cucumis melo var. makuwa]	[more]

BLAST of CmoCh11G010140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54520.1	5.3e-37	50.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33975:SF2	MYELIN-ASSOCIATED OLIGODENDROCYTE BASIC PROTEIN	coord: 74..229
None	No IPR available	PANTHER	PTHR33975	MYELIN-ASSOCIATED OLIGODENDROCYTE BASIC PROTEIN	coord: 74..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G010140.1	CmoCh11G010140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane