CmoCh11G009640 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G009640
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CRIB domain-containing protein RIC4
Location	Cmo_Chr11: 5072980 .. 5074342 (-)
RNA-Seq Expression	CmoCh11G009640
Synteny	CmoCh11G009640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATCGGATGCATCTCCGAATCAAGTGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAACCCACCGACCCTAATTCGTCTCCTCGATCAAGTCTTTTCTCCAACTCTCTCTCTCTCTTTCGTTCTTCGCTGGTTATTACGAGCTTGTTTGATATCTTATCCCGTTCGAGTTCGAATGGCTAATTTTTGTATGGGTTTTGTATTGAAGGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTCACAGAGATTCACAGCACTTGCAAAGCCTAATATAGGAGTTGGGTTTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGGTGTTTTTTTTTTTTTTTTTTTTTTCTTTTTTAAATTGAAAAAAGAAATTAAAATATTTACTTCTCCGTGTTATTGGGAAGGTTCGTGGGTCAGTTGGGTCTAGTTGAGTTAAGACATTTTTTTAGATCAACCTAATTATTGGGTTGATTCTTCGTAAGCGAAAATGTATATTTTAAAATTAACAATAAATTCGGGTCAGTTCAATTCAACCCAAGTTAGTTTAGGAGAACCCATGAACCAACCCAATCTATAAAATTTTCATTTATGTGAACGTGATCAAGCCTACCACTAACAGATATCATCCACTTTAGCTCGTTACATAAAGTCGTGAGTCTCATGATTTTAAAACATGTCTGTTAGAGAGAAGTTTCCACAGCCTTACAAAGGATGCTTCGTTCCCCTATCCAACCGACATGAAATCTCACAAATAAGTTCAAGACCCAACCCAAATCATACGAAATGAATTGGGTTGCTCGAGTTTTATGAATCATCGAGTTTTGTCTTGTTAACACCTGTTATTATACGGAAAAAAACACTCTAATTTCTTTAATAATATATTCAAATTATCTTGTCATTATTTCTAAATTCTAATTTTTTTTTCTTTTTTGGGTAATGATATTATTTTGGGAAGTGTACAAAGAGGAGATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATTTGACCCACATCGGCTGTGATGCCACCACAATATCAGATGACCCCAACAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGTTCTTGGACCGAACTCGAACTCGATCATCATCTTTCAAACCCTAATGTTCTACCTCATTCTATTTGAAAACCAAAAACATATGTTAAAAAAGCTCGTGTTGATTCGATGTAAAATTTCTTATCTATAAAATAACTCGACATGTTACGTGGCTTATTCGTTCATAATTGCTATAAAGAATGTTG

mRNA sequence

ATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATCGGATGCATCTCCGAATCAAGTGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAACCCACCGACCCTAATTCGTCTCCTCGATCAAGTCTTTTCTCCAACTCTCTCTCTCTCTTTCGTTCTTCGCTGGTTATTACGAGCTTGTTTGATATCTTATCCCGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTCACAGAGATTCACAGCACTTGCAAAGCCTAATATAGGAGTTGGGTTTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGTGTACAAAGAGGAGATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATTTGACCCACATCGGCTGTGATGCCACCACAATATCAGATGACCCCAACAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGTTCTTGGACCGAACTCGAACTCGATCATCATCTTTCAAACCCTAATGTTCTACCTCATTCTATTTGAAAACCAAAAACATATGTTAAAAAAGCTCGTGTTGATTCGATGTAAAATTTCTTATCTATAAAATAACTCGACATGTTACGTGGCTTATTCGTTCATAATTGCTATAAAGAATGTTG

Coding sequence (CDS)

ATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATCGGATGCATCTCCGAATCAAGTGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAACCCACCGACCCTAATTCGTCTCCTCGATCAAGTCTTTTCTCCAACTCTCTCTCTCTCTTTCGTTCTTCGCTGGTTATTACGAGCTTGTTTGATATCTTATCCCGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTCACAGAGATTCACAGCACTTGCAAAGCCTAATATAGGAGTTGGGTTTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGTGTACAAAGAGGAGATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATTTGACCCACATCGGCTGTGATGCCACCACAATATCAGATGACCCCAACAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGTTCTTGGACCGAACTCGAACTCGATCATCATCTTTCAAACCCTAATGTTCTACCTCATTCTATTTGA

Protein sequence

MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSLFSNSLSLFRSSLVITSLFDILSREKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSNPNVLPHSI

Homology

[Close]

BLAST of CmoCh11G009640 vs. ExPASy Swiss-Prot
Match: Q9FFD5 (CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana OX=3702 GN=RIC4 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.1e-19
Identity = 67/185 (36.22%), Postives = 99/185 (53.51%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSLFSNSLSLFRSSLVI 60
           MR +MER V+LPFSIGCIS SSVAV    +  SKP   +S                    
Sbjct: 1   MRDRMERLVVLPFSIGCISVSSVAV---LSPLSKPHHHHSRQ------------------ 60

Query: 61  TSLFDILSREKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE 120
                 + RE++E   E+++KN  +F A++KP I +G +R++K FK  SQLF  K+E +E
Sbjct: 61  ------VIREQEE---EDNMKNVFKFLAVSKPEISIGINRIFKSFKTISQLFADKDEEKE 120

Query: 121 ------MEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELE 180
                 ME+G PT+VKH++HIG ++   +     P   WE L+   L +  +S+     E
Sbjct: 121 EVETSGMEIGVPTNVKHVSHIGWESGLTA--ATGPGKGWEDLIPPELLAAAASKK----E 149

[Close]

BLAST of CmoCh11G009640 vs. ExPASy Swiss-Prot
Match: Q8GYU0 (CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana OX=3702 GN=RIC2 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 93  NIGVGFHRLYKGFKNFSQLFV-YKEEME----EMEVGCPTDVKHLTHIGCDAT-TISDDP 151
           NI  G +R+ + FK+FS  F+ Y+EE +    EME+G PTDVKHL+HIG D T T  D+ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

[Close]

BLAST of CmoCh11G009640 vs. ExPASy Swiss-Prot
Match: Q9M0Y9 (CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.0e-06
Identity = 21/41 (51.22%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 101 LYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATT 142
           +YKGFK  SQ+F  ++E +E+E+G PTDVKH+ HIG + ++
Sbjct: 8   IYKGFKCISQIFAVEKERDEIEIGFPTDVKHVAHIGWEGSS 48

[Close]

BLAST of CmoCh11G009640 vs. ExPASy Swiss-Prot
Match: Q1G3Y0 (CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana OX=3702 GN=RIC9 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.3e-05
Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 0


Query: 98  FHRLY-KGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATTIS 144
           F  LY K FK FS +F  +EE EEME+G PTDV+H++HIG D+++ S
Sbjct: 5   FKGLYNKSFKCFSDIFDVEEE-EEMEIGYPTDVRHVSHIGWDSSSSS 50

[Close]

BLAST of CmoCh11G009640 vs. ExPASy TrEMBL
Match: A0A6J1F000 (CRIB domain-containing protein RIC4 OS=Cucurbita moschata OX=3662 GN=LOC111441091 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.3e-84
Identity = 165/192 (85.94%), Postives = 165/192 (85.94%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSLFSNSLSLFRSSLVI 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS               
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS--------------- 60

Query: 61  TSLFDILSREKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EE 120
                    EKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EE
Sbjct: 61  ---------EKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE 120

Query: 121 MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDH 180
           MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDH
Sbjct: 121 MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDH 168

Query: 181 HLSNPNVLPHSI 190
           HLSNPNVLPHSI
Sbjct: 181 HLSNPNVLPHSI 168

[Close]

BLAST of CmoCh11G009640 vs. ExPASy TrEMBL
Match: A0A6J1L039 (CRIB domain-containing protein RIC4 OS=Cucurbita maxima OX=3661 GN=LOC111499156 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.9e-81
Identity = 162/192 (84.38%), Postives = 162/192 (84.38%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSLFSNSLSLFRSSLVI 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS               
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS--------------- 60

Query: 61  TSLFDILSREKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EE 120
                    EKDEMVLEESLKN QRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EE
Sbjct: 61  ---------EKDEMVLEESLKNLQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE 120

Query: 121 MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDH 180
           MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELD 
Sbjct: 121 MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDD 168

Query: 181 HLSNPNVLPHSI 190
           HLSN NVLPHSI
Sbjct: 181 HLSNSNVLPHSI 168

[Close]

BLAST of CmoCh11G009640 vs. ExPASy TrEMBL
Match: A0A1S3B9E6 (CRIB domain-containing protein RIC4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487233 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 8.6e-49
Identity = 122/206 (59.22%), Postives = 131/206 (63.59%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSLFSNSLSLFRSSLVI 60
           MRRKMER VLLPFS+GCISE+SVAVGIQ N+T+    P SSP SS               
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSS--------------- 60

Query: 61  TSLFDILSREKD---------EMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQL 120
                    EKD         E  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKN SQL
Sbjct: 61  ---------EKDEDGKEEIGCERSLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQL 120

Query: 121 FVYKEEME----EMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSS 180
           FVYKEEME    EME+G PTDVKH+THIGCDAT  S+D  N FI WETLLAS        
Sbjct: 121 FVYKEEMEEMEMEMEIGSPTDVKHVTHIGCDATARSEDAANSFIAWETLLASS------- 172

Query: 181 RSWTELELDHHLSN----PNVLPHSI 190
            SW   + D  LSN    PN+L HSI
Sbjct: 181 -SWR--QFDDQLSNPKHLPNILGHSI 172

[Close]

BLAST of CmoCh11G009640 vs. ExPASy TrEMBL
Match: A0A0A0LY31 (CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G658520 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 4.2e-48
Identity = 122/206 (59.22%), Postives = 132/206 (64.08%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSLFSNSLSLFRSSLVI 60
           MRRKMER VLLPFS+GCISE+SVAVGIQ N+T+    P SSP SS               
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSS--------------- 60

Query: 61  TSLFDILSREKD---------EMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQL 120
                    EKD         E +LEESLKNSQRFTALAKPNIGVGFHRLYKGFKN SQL
Sbjct: 61  ---------EKDEDGKEEIGCESLLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQL 120

Query: 121 FVYKEEME----EMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSS 180
           FVYKEEME    EME+G PTDVKH+THIGCDATT  +D  N FI WETLLAS        
Sbjct: 121 FVYKEEMEEMEMEMEIGSPTDVKHVTHIGCDATT-REDAANSFIAWETLLASS------- 171

Query: 181 RSWTELELDHHLSN----PNVLPHSI 190
            SW   + D  LSN    PN+L HSI
Sbjct: 181 -SWR--QFDDQLSNPKHLPNILGHSI 171

[Close]

BLAST of CmoCh11G009640 vs. ExPASy TrEMBL
Match: A0A1S3B8Q2 (CRIB domain-containing protein RIC4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487233 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.5e-48
Identity = 119/197 (60.41%), Postives = 129/197 (65.48%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSLFSNSLSLFRSSLVI 60
           MRRKMER VLLPFS+GCISE+SVAVGIQ N+T+    P SSP S    +           
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDE---------- 60

Query: 61  TSLFDILSREKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEME- 120
               D       E  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKN SQLFVYKEEME 
Sbjct: 61  ----DGKEEIGCERSLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEE 120

Query: 121 ---EMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELD 180
              EME+G PTDVKH+THIGCDAT  S+D  N FI WETLLAS         SW   + D
Sbjct: 121 MEMEMEIGSPTDVKHVTHIGCDATARSEDAANSFIAWETLLASS--------SWR--QFD 173

Query: 181 HHLSN----PNVLPHSI 190
             LSN    PN+L HSI
Sbjct: 181 DQLSNPKHLPNILGHSI 173

[Close]

BLAST of CmoCh11G009640 vs. NCBI nr
Match: KAG7022201.1 (CRIB domain-containing protein RIC4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.5 bits (820), Expect = 9.9e-84
Identity = 165/191 (86.39%), Postives = 165/191 (86.39%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSLFSNSLSLFRSSLVI 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS               
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS--------------- 60

Query: 61  TSLFDILSREKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE 120
                    EKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE
Sbjct: 61  ---------EKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE 120

Query: 121 MEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWT--ELELDHH 180
           MEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWT  ELELDHH
Sbjct: 121 MEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHH 167

Query: 181 LSNPNVLPHSI 190
           LSNPNVLPHSI
Sbjct: 181 LSNPNVLPHSI 167

[Close]

BLAST of CmoCh11G009640 vs. NCBI nr
Match: XP_022933781.1 (CRIB domain-containing protein RIC4 [Cucurbita moschata])

HSP 1 Score: 320.1 bits (819), Expect = 1.3e-83
Identity = 165/192 (85.94%), Postives = 165/192 (85.94%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSLFSNSLSLFRSSLVI 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS               
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS--------------- 60

Query: 61  TSLFDILSREKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EE 120
                    EKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EE
Sbjct: 61  ---------EKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE 120

Query: 121 MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDH 180
           MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDH
Sbjct: 121 MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDH 168

Query: 181 HLSNPNVLPHSI 190
           HLSNPNVLPHSI
Sbjct: 181 HLSNPNVLPHSI 168

[Close]

BLAST of CmoCh11G009640 vs. NCBI nr
Match: XP_023520680.1 (CRIB domain-containing protein RIC4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.2 bits (814), Expect = 4.9e-83
Identity = 164/192 (85.42%), Postives = 164/192 (85.42%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSLFSNSLSLFRSSLVI 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS               
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS--------------- 60

Query: 61  TSLFDILSREKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EE 120
                    EKDEMVLEESLKNSQRFT LAKPNIGVGFHRLYKGFKNFSQLFVYK   EE
Sbjct: 61  ---------EKDEMVLEESLKNSQRFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE 120

Query: 121 MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDH 180
           MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDH
Sbjct: 121 MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDH 168

Query: 181 HLSNPNVLPHSI 190
           HLSNPNVLPHSI
Sbjct: 181 HLSNPNVLPHSI 168

[Close]

BLAST of CmoCh11G009640 vs. NCBI nr
Match: KAG6588282.1 (CRIB domain-containing protein RIC4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315.1 bits (806), Expect = 4.2e-82
Identity = 165/194 (85.05%), Postives = 165/194 (85.05%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSLFSNSLSLFRSSLVI 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS               
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS--------------- 60

Query: 61  TSLFDILSREKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EE 120
                    EKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EE
Sbjct: 61  ---------EKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE 120

Query: 121 MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWT--ELEL 180
           MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWT  ELEL
Sbjct: 121 MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELEL 170

Query: 181 DHHLSNPNVLPHSI 190
           DHHLSNPNVLPHSI
Sbjct: 181 DHHLSNPNVLPHSI 170

[Close]

BLAST of CmoCh11G009640 vs. NCBI nr
Match: XP_023006430.1 (CRIB domain-containing protein RIC4 [Cucurbita maxima])

HSP 1 Score: 311.2 bits (796), Expect = 6.0e-81
Identity = 162/192 (84.38%), Postives = 162/192 (84.38%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSLFSNSLSLFRSSLVI 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS               
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSS--------------- 60

Query: 61  TSLFDILSREKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EE 120
                    EKDEMVLEESLKN QRFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EE
Sbjct: 61  ---------EKDEMVLEESLKNLQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE 120

Query: 121 MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDH 180
           MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELD 
Sbjct: 121 MEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDD 168

Query: 181 HLSNPNVLPHSI 190
           HLSN NVLPHSI
Sbjct: 181 HLSNSNVLPHSI 168

[Close]

BLAST of CmoCh11G009640 vs. TAIR 10
Match: AT5G16490.1 (ROP-interactive CRIB motif-containing protein 4 )

HSP 1 Score: 96.7 bits (239), Expect = 2.2e-20
Identity = 67/185 (36.22%), Postives = 99/185 (53.51%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSLFSNSLSLFRSSLVI 60
           MR +MER V+LPFSIGCIS SSVAV    +  SKP   +S                    
Sbjct: 1   MRDRMERLVVLPFSIGCISVSSVAV---LSPLSKPHHHHSRQ------------------ 60

Query: 61  TSLFDILSREKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE 120
                 + RE++E   E+++KN  +F A++KP I +G +R++K FK  SQLF  K+E +E
Sbjct: 61  ------VIREQEE---EDNMKNVFKFLAVSKPEISIGINRIFKSFKTISQLFADKDEEKE 120

Query: 121 ------MEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELE 180
                 ME+G PT+VKH++HIG ++   +     P   WE L+   L +  +S+     E
Sbjct: 121 EVETSGMEIGVPTNVKHVSHIGWESGLTA--ATGPGKGWEDLIPPELLAAAASKK----E 149

[Close]

BLAST of CmoCh11G009640 vs. TAIR 10
Match: AT1G27380.2 (ROP-interactive CRIB motif-containing protein 2 )

HSP 1 Score: 58.2 bits (139), Expect = 8.6e-09
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 93  NIGVGFHRLYKGFKNFSQLFV-YKEEME----EMEVGCPTDVKHLTHIGCDAT-TISDDP 151
           NI  G +R+ + FK+FS  F+ Y+EE +    EME+G PTDVKHL+HIG D T T  D+ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

[Close]

BLAST of CmoCh11G009640 vs. TAIR 10
Match: AT1G27380.1 (ROP-interactive CRIB motif-containing protein 2 )

HSP 1 Score: 58.2 bits (139), Expect = 8.6e-09
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 93  NIGVGFHRLYKGFKNFSQLFV-YKEEME----EMEVGCPTDVKHLTHIGCDAT-TISDDP 151
           NI  G +R+ + FK+FS  F+ Y+EE +    EME+G PTDVKHL+HIG D T T  D+ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

[Close]

BLAST of CmoCh11G009640 vs. TAIR 10
Match: AT4G04900.1 (ROP-interactive CRIB motif-containing protein 10 )

HSP 1 Score: 53.5 bits (127), Expect = 2.1e-07
Identity = 21/41 (51.22%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 101 LYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATT 142
           +YKGFK  SQ+F  ++E +E+E+G PTDVKH+ HIG + ++
Sbjct: 8   IYKGFKCISQIFAVEKERDEIEIGFPTDVKHVAHIGWEGSS 48

[Close]

BLAST of CmoCh11G009640 vs. TAIR 10
Match: AT1G61795.1 (PAK-box/P21-Rho-binding family protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.0e-06
Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 0


Query: 98  FHRLY-KGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATTIS 144
           F  LY K FK FS +F  +EE EEME+G PTDV+H++HIG D+++ S
Sbjct: 5   FKGLYNKSFKCFSDIFDVEEE-EEMEIGYPTDVRHVSHIGWDSSSSS 50

The following BLAST results are available for this feature:

BLAST of CmoCh11G009640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFD5	3.1e-19	36.22	CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana OX=3702 GN=RIC4 PE=1...	[more]
Q8GYU0	1.2e-07	48.44	CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana OX=3702 GN=RIC2 PE=1...	[more]
Q9M0Y9	3.0e-06	51.22	CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE...	[more]
Q1G3Y0	4.3e-05	55.32	CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana OX=3702 GN=RIC9 PE=1...	[more]

BLAST of CmoCh11G009640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F000	6.3e-84	85.94	CRIB domain-containing protein RIC4 OS=Cucurbita moschata OX=3662 GN=LOC11144109...	[more]
A0A6J1L039	2.9e-81	84.38	CRIB domain-containing protein RIC4 OS=Cucurbita maxima OX=3661 GN=LOC111499156 ...	[more]
A0A1S3B9E6	8.6e-49	59.22	CRIB domain-containing protein RIC4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0LY31	4.2e-48	59.22	CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G658520 PE=4 S...	[more]
A0A1S3B8Q2	5.5e-48	60.41	CRIB domain-containing protein RIC4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of CmoCh11G009640 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022201.1	9.9e-84	86.39	CRIB domain-containing protein RIC4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022933781.1	1.3e-83	85.94	CRIB domain-containing protein RIC4 [Cucurbita moschata]	[more]
XP_023520680.1	4.9e-83	85.42	CRIB domain-containing protein RIC4 [Cucurbita pepo subsp. pepo]	[more]
KAG6588282.1	4.2e-82	85.05	CRIB domain-containing protein RIC4, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_023006430.1	6.0e-81	84.38	CRIB domain-containing protein RIC4 [Cucurbita maxima]	[more]

BLAST of CmoCh11G009640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16490.1	2.2e-20	36.22	ROP-interactive CRIB motif-containing protein 4	[more]
AT1G27380.2	8.6e-09	48.44	ROP-interactive CRIB motif-containing protein 2	[more]
AT1G27380.1	8.6e-09	48.44	ROP-interactive CRIB motif-containing protein 2	[more]
AT4G04900.1	2.1e-07	51.22	ROP-interactive CRIB motif-containing protein 10	[more]
AT1G61795.1	3.0e-06	55.32	PAK-box/P21-Rho-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 122..157 e-value: 2.0E-4 score: 21.7
IPR000095	CRIB domain	PROSITE	PS50108	CRIB	coord: 123..136 score: 8.307275
IPR044509	CRIB domain-containing protein RIC2/4	PANTHER	PTHR46931	CRIB DOMAIN-CONTAINING PROTEIN RIC2	coord: 1..176
None	No IPR available	PANTHER	PTHR46931:SF6	CRIB DOMAIN-CONTAINING PROTEIN RIC4	coord: 1..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G009640.1	CmoCh11G009640.1	mRNA