CmoCh11G009450 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G009450
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Flowering locus T-like 1
Location	Cmo_Chr11: 4912939 .. 4915510 (-)
RNA-Seq Expression	CmoCh11G009450
Synteny	CmoCh11G009450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATCTTTTCAGCTCTCTCACGTACTACCATCCTCTCAACGCCATGCCGAGAGACCGTGACCCTTTGGTCATCGGGAGAGTCATCGGCGACGTTATCGACTCGTTCACGAGGTCCATTTCCATTAGGGCTACTTACAACAATAGGGAAATTAGCAATGGGTGTGAGCTCAAACCCTCTCAAGTTGTCAACCAGCCAAGAGTTGAGATCGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTAAATCCTTTGTTTTTACCTTTTCACTGTCTTGGCCATGCATTTTTTTACCCTTTCATTTCACTTTGTTTGCTATAGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGATCCTAATCTAAGGGAATACTTGCATTGGTACGTCCATTTTTTTTTTTACCTTTTCACTATAAATTTTTTTACGGTGTCGAGAGGTCATCATAATATAACCGACAATTTTACACATTAAATATGAAAAAAAAAAAATTGTACGTCTGCTTCACTTTTGCATCCTATGATCATTAAAACGCAAACATTTTTTTGATATATATATTTGATCGTTATTAAGAGTTGGTCACATTCTGGCGACCTCGTTGAATAATTTTTCATCATGGGTAATTTTTCTTTTTACTTTTCTCGAGAAAGGTAACCTATTTTTTTCCAAAAAAAGAATCATTCTTTCTAATAACCAATTAGAATGTTGGTCCATACATACATCTTTACTTGATCGTGACAAATTTTTTTTTTATAGATTGAAAGTTTAAATTTTTAATGTTAATAATAGTTTTTAAACATTATTATATTTAAAATATGATAAGGTAAAGAATCGAACCATCGATTTTTAGGATGTAAAATAATGTCTTATCGAATAAGTTATGTTTGAATAGAATCATAGATGTCTCTAGTCTTGGAGATTGTCGGTGTCCTTTCGTAACGAAGTAAAGCCTTGTTCTAAAAATTTAAGAGAATCAAAGTCTAATAATGAATTAAATGGATAGTTTAATGTGGATCCTTCCCGATGTAAATGTATATAATTGTTTCGGTCCGATTCGCAGGTTGGTGACTGATATCCCCGCTACAACTGGAGCGACCTTTGGTACGTTATCTTTATGTTTCTAAACATTTTGTTTATCGAGATGTGTTTGTGTCATCAAATTTATTAAAAGTTTGATAGGGATGCCTCATAACATTATATATTCCTTACAATTATTAAAGTACTTTGGAAAAGAGATCCCAAAAAAATTAAATTAGCTTTTTCTTCCCGTCAATTTCTAATATCACGGGTATGAAAATTTAAACATCTGACTTTAAAGCATACCTGTGCACACTTTTCCACAATAAATGTGAGATGTTACATCAGTTGGAGAATGAAACGAAACATTCCCTTATAAGGATGTGGAAATCTCTCCCTAGCAGACGCGTTTTAAAATCGTGAGGCTGACAGCAACATGTAATGGGCGAAAGCGGACAATGTCTACTAGTGGTGGGCTTGGATTGTTACAAATAGTATCAAAGTCTGTCACTGAACGGTGTGCCAGTGAGGACGTTGGGTCTCAAGAGGAATTTGTGAGTTTCCACCTCAGTTGGAGAGGGGAACGAAACATACTTTATAAGAGTGTGGAAACCTCTCTCCAGCAGACGCGTGTTAAAACCATGAGGCTAACGGTGATACGTAACGAGCTAAAACAGACAATATCTACTGGTGGTGGGCTTGGACTGTTACAAATGGTATTAAAGCTTGTCACAGAGTGGTGTGCTAACGAGAACATTGGTCTCCAAGGGGAATTTGTGAGATCCCACATGATTAGGAAGGAGAACGAAACATTCTTTATAAAGGCGTGGAAACCTCTCCCTAGCAGACACATTTTAAAATCGTGAGGCTAAGAGCGACACGTAATGGGATAAAGCGAACAATATTTACTAGCAGTGAGTTTAGACTGTTACAAATAGTATCATAGCCCGTCACCAAGCGGTATACTAGCGAGGACGCTGTGTCTCCAAGGGGAGATGGATTATGAGATCCCACTTCAGTTGAAGAGGGAAACGAAACATTCTTTACAAGAGTATAGAAACCTCTCCCCAACAGACGCATTATTCATAAATTCTAATTTCTTCTTTTCTCGAGTTTAATGTCACATGAAAGCGTAGGACTTAAACCGACTCCAACATCTTAATTATACATATATTAACTAGTTGAGTTATATTAATCGATATGAACAATGGTAGGTCAAGAGATCGTGTGCTATGAGAGCCCGAGGCCAACGGTGGGTATCCATCGTCTCGTGCTGGTGTTGTTTCGACAGCTTGGAAGGCAAACGGTGTACGCTCCTGGGTGGCGCCAGAACTTCAACACGAGAGACTTTGCAGAGCTTTACAATCTAGGCTTGCCGGTGGCCGCCGTTTATTTCAATTGCCAAAGGGAAAGTGGGTCTGGTGGAAGGAGAAGAAGCCAAAATGATTTCCAAGTCCCCACCTCACATTAATTAGATTAATATTATAGCCACTATCATCTATTAATCCTACCTTGCTTTTAGATTAACCTTTATTTTGGATCATAAATAAGCCCAA

mRNA sequence

CACATCTTTTCAGCTCTCTCACGTACTACCATCCTCTCAACGCCATGCCGAGAGACCGTGACCCTTTGGTCATCGGGAGAGTCATCGGCGACGTTATCGACTCGTTCACGAGGTCCATTTCCATTAGGGCTACTTACAACAATAGGGAAATTAGCAATGGGTGTGAGCTCAAACCCTCTCAAGTTGTCAACCAGCCAAGAGTTGAGATCGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGATCCTAATCTAAGGGAATACTTGCATTGGTTGGTGACTGATATCCCCGCTACAACTGGAGCGACCTTTGGTCAAGAGATCGTGTGCTATGAGAGCCCGAGGCCAACGGTGGGTATCCATCGTCTCGTGCTGGTGTTGTTTCGACAGCTTGGAAGGCAAACGGTGTACGCTCCTGGGTGGCGCCAGAACTTCAACACGAGAGACTTTGCAGAGCTTTACAATCTAGGCTTGCCGGTGGCCGCCGTTTATTTCAATTGCCAAAGGGAAAGTGGGTCTGGTGGAAGGAGAAGAAGCCAAAATGATTTCCAAGTCCCCACCTCACATTAATTAGATTAATATTATAGCCACTATCATCTATTAATCCTACCTTGCTTTTAGATTAACCTTTATTTTGGATCATAAATAAGCCCAA

Coding sequence (CDS)

ATGCCGAGAGACCGTGACCCTTTGGTCATCGGGAGAGTCATCGGCGACGTTATCGACTCGTTCACGAGGTCCATTTCCATTAGGGCTACTTACAACAATAGGGAAATTAGCAATGGGTGTGAGCTCAAACCCTCTCAAGTTGTCAACCAGCCAAGAGTTGAGATCGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGATCCTAATCTAAGGGAATACTTGCATTGGTTGGTGACTGATATCCCCGCTACAACTGGAGCGACCTTTGGTCAAGAGATCGTGTGCTATGAGAGCCCGAGGCCAACGGTGGGTATCCATCGTCTCGTGCTGGTGTTGTTTCGACAGCTTGGAAGGCAAACGGTGTACGCTCCTGGGTGGCGCCAGAACTTCAACACGAGAGACTTTGCAGAGCTTTACAATCTAGGCTTGCCGGTGGCCGCCGTTTATTTCAATTGCCAAAGGGAAAGTGGGTCTGGTGGAAGGAGAAGAAGCCAAAATGATTTCCAAGTCCCCACCTCACATTAA

Protein sequence

MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDFQVPTSH

Homology

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BLAST of CmoCh11G009450 vs. ExPASy Swiss-Prot
Match: Q93WI9 (Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 9.1e-85
Identity = 138/171 (80.70%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 3   RDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRT 62
           RDRDPLV+GRV+GDV+D+F RS +++ TY ++ +SNGCELKPS V +QPRVE+GG D+RT
Sbjct: 6   RDRDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDMRT 65

Query: 63  FFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLV 122
           F+TLVMVDPDAPSPSDPNLREYLHWLVTDIP TT A+FGQE++CYESPRPT+GIHRLV V
Sbjct: 66  FYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFV 125

Query: 123 LFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 174
           LF+QLGRQTVYAPGWRQNFNT+DFAELYNLG PVAAVYFNCQRE+GSGGRR
Sbjct: 126 LFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRR 176

[Close]

BLAST of CmoCh11G009450 vs. ExPASy Swiss-Prot
Match: Q9SXZ2 (Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2)

HSP 1 Score: 296.2 bits (757), Expect = 2.6e-79
Identity = 130/169 (76.92%), Postives = 152/169 (89.94%), Query Frame = 0


Query: 5   RDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPL++ RV+GDV+D F RSI+++ TY  RE++NG +L+PSQV N+PRVEIGG DLR F+
Sbjct: 6   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query: 65  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS+P+LREYLHWLVTDIPATTG TFG EIVCYE+P PT GIHR+V +LF
Sbjct: 66  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 174
           RQLGRQTVYAPGWRQNFNTR+FAE+YNLGLPVAAV++NCQRESG GGRR
Sbjct: 126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

[Close]

BLAST of CmoCh11G009450 vs. ExPASy Swiss-Prot
Match: Q8VWH2 (Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT1 PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 4.4e-79
Identity = 131/168 (77.98%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 6   DPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFFT 65
           DPLV+GR++GDV+D F R  ++  +Y  R +SNGCELKPS V  QPRV +GG D+RTF+T
Sbjct: 8   DPLVVGRIVGDVLDPFVRITNLSVSYGARIVSNGCELKPSMVTQQPRVVVGGNDMRTFYT 67

Query: 66  LVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLFR 125
           LVMVDPDAPSPS+PNLREYLHWLVTDIP TTGATFGQE++CYESPRPT+GIHRLV VLF+
Sbjct: 68  LVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHRLVFVLFQ 127

Query: 126 QLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 174
           QLGRQTVYAPGWRQNF+TR+FAELYNLG PVA VYFNCQRE+GSGGRR
Sbjct: 128 QLGRQTVYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGRR 175

[Close]

BLAST of CmoCh11G009450 vs. ExPASy Swiss-Prot
Match: Q9S7R5 (Protein TWIN SISTER of FT OS=Arabidopsis thaliana OX=3702 GN=TSF PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 7.0e-77
Identity = 128/169 (75.74%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 5   RDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPLV+G V+GDV+D FTR +S++ TY +RE++NG +L+PSQV+N+P VEIGG D R F+
Sbjct: 6   RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query: 65  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS+P+ REYLHWLVTDIPATTG  FG E+VCYESPRP  GIHR+VLVLF
Sbjct: 66  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 174
           RQLGRQTVYAPGWRQ FNTR+FAE+YNLGLPVAA YFNCQRE+G GGRR
Sbjct: 126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

[Close]

BLAST of CmoCh11G009450 vs. ExPASy Swiss-Prot
Match: Q9FIT4 (Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana OX=3702 GN=BFT PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.5e-55
Identity = 105/176 (59.66%), Postives = 135/176 (76.70%), Query Frame = 0


Query: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYN-NREISNGCELKPSQVVNQPRVEIGGTD 60
           M R+ +PL++GRVIGDV++ F  S+++R T+N N  +SNG EL PS ++++PRVEIGG D
Sbjct: 1   MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query: 61  LRTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRL 120
           LR+FFTL+M+DPDAPSPS+P +REYLHW+VTDIP TT A+FG+EIV YE+P+P  GIHR 
Sbjct: 61  LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query: 121 VLVLFRQLGRQTV-YAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 175
           V  LF+Q GRQ V  AP  R+ FNT  F+  + L  PVAAVYFN QRE+    RRR
Sbjct: 121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAP--RRR 174

[Close]

BLAST of CmoCh11G009450 vs. ExPASy TrEMBL
Match: A0A6J1F141 (protein HEADING DATE 3A OS=Cucurbita moschata OX=3662 GN=LOC111441191 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.4e-104
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDFQ 180
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDFQ
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDFQ 180

Query: 181 VPTSH 186
           VPTSH
Sbjct: 181 VPTSH 185

[Close]

BLAST of CmoCh11G009450 vs. ExPASy TrEMBL
Match: A6YE10 (FTL2 OS=Cucurbita moschata OX=3662 PE=2 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 4.7e-100
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDF 180
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQ+DF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179

[Close]

BLAST of CmoCh11G009450 vs. ExPASy TrEMBL
Match: A6XN27 (Flowering locus T-like 2 OS=Cucurbita maxima OX=3661 GN=FTL2 PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98
Identity = 174/179 (97.21%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDVIDSFT+SISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFTKSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGA FGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDF 180
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR+Q+DF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRTQDDF 179

[Close]

BLAST of CmoCh11G009450 vs. ExPASy TrEMBL
Match: A0A6J1D9F0 (protein HEADING DATE 3A OS=Momordica charantia OX=3673 GN=LOC111018250 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.5e-95
Identity = 166/179 (92.74%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDV+DSF+RSISIR TY++RE++NGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDSFSRSISIRVTYSSREVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGA FGQEIVCYESPRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDF 180
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR Q+D+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY 179

[Close]

BLAST of CmoCh11G009450 vs. ExPASy TrEMBL
Match: B9ZYL0 (FT-like protein OS=Cucumis sativus OX=3659 GN=CsFT PE=2 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.0e-94
Identity = 165/179 (92.18%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDV+D F+RSISIR TY+ +E++NGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDPFSRSISIRVTYSTKEVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDF 180
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR Q+D+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY 179

[Close]

BLAST of CmoCh11G009450 vs. NCBI nr
Match: XP_022933924.1 (protein HEADING DATE 3A [Cucurbita moschata])

HSP 1 Score: 388.7 bits (997), Expect = 2.9e-104
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDFQ 180
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDFQ
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDFQ 180

Query: 181 VPTSH 186
           VPTSH
Sbjct: 181 VPTSH 185

[Close]

BLAST of CmoCh11G009450 vs. NCBI nr
Match: ABR20499.1 (FTL2 [Cucurbita moschata])

HSP 1 Score: 373.6 bits (958), Expect = 9.7e-100
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDF 180
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQ+DF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179

[Close]

BLAST of CmoCh11G009450 vs. NCBI nr
Match: XP_023520641.1 (protein HEADING DATE 3A [Cucurbita pepo subsp. pepo] >KAG6588265.1 Protein HEADING DATE 3A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022184.1 Protein HEADING DATE 3A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 373.2 bits (957), Expect = 1.3e-99
Identity = 177/179 (98.88%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDF 180
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQ+DF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179

[Close]

BLAST of CmoCh11G009450 vs. NCBI nr
Match: XP_022973471.1 (protein HEADING DATE 3A [Cucurbita maxima] >ABI94606.1 flowering locus T-like 2 [Cucurbita maxima])

HSP 1 Score: 369.0 bits (946), Expect = 2.4e-98
Identity = 174/179 (97.21%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDVIDSFT+SISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFTKSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGA FGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDF 180
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR+Q+DF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRTQDDF 179

[Close]

BLAST of CmoCh11G009450 vs. NCBI nr
Match: XP_022149957.1 (protein HEADING DATE 3A [Momordica charantia])

HSP 1 Score: 357.5 bits (916), Expect = 7.2e-95
Identity = 166/179 (92.74%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDV+DSF+RSISIR TY++RE++NGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDSFSRSISIRVTYSSREVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGA FGQEIVCYESPRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDF 180
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR Q+D+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY 179

[Close]

BLAST of CmoCh11G009450 vs. TAIR 10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 296.2 bits (757), Expect = 1.8e-80
Identity = 130/169 (76.92%), Postives = 152/169 (89.94%), Query Frame = 0


Query: 5   RDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPL++ RV+GDV+D F RSI+++ TY  RE++NG +L+PSQV N+PRVEIGG DLR F+
Sbjct: 6   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query: 65  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS+P+LREYLHWLVTDIPATTG TFG EIVCYE+P PT GIHR+V +LF
Sbjct: 66  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 174
           RQLGRQTVYAPGWRQNFNTR+FAE+YNLGLPVAAV++NCQRESG GGRR
Sbjct: 126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

[Close]

BLAST of CmoCh11G009450 vs. TAIR 10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 288.1 bits (736), Expect = 5.0e-78
Identity = 128/169 (75.74%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 5   RDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPLV+G V+GDV+D FTR +S++ TY +RE++NG +L+PSQV+N+P VEIGG D R F+
Sbjct: 6   RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query: 65  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS+P+ REYLHWLVTDIPATTG  FG E+VCYESPRP  GIHR+VLVLF
Sbjct: 66  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 174
           RQLGRQTVYAPGWRQ FNTR+FAE+YNLGLPVAA YFNCQRE+G GGRR
Sbjct: 126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

[Close]

BLAST of CmoCh11G009450 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-56
Identity = 105/176 (59.66%), Postives = 135/176 (76.70%), Query Frame = 0


Query: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYN-NREISNGCELKPSQVVNQPRVEIGGTD 60
           M R+ +PL++GRVIGDV++ F  S+++R T+N N  +SNG EL PS ++++PRVEIGG D
Sbjct: 1   MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query: 61  LRTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRL 120
           LR+FFTL+M+DPDAPSPS+P +REYLHW+VTDIP TT A+FG+EIV YE+P+P  GIHR 
Sbjct: 61  LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query: 121 VLVLFRQLGRQTV-YAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 175
           V  LF+Q GRQ V  AP  R+ FNT  F+  + L  PVAAVYFN QRE+    RRR
Sbjct: 121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAP--RRR 174

[Close]

BLAST of CmoCh11G009450 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 214.2 bits (544), Expect = 9.1e-56
Identity = 100/169 (59.17%), Postives = 131/169 (77.51%), Query Frame = 0


Query: 6   DPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFFT 65
           +PL++GRV+GDV+D FT +  +  +YN +++SNG EL PS V ++PRVEI G DLR+FFT
Sbjct: 10  EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFT 69

Query: 66  LVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLFR 125
           LVM+DPD P PSDP L+E+LHW+VT+IP TT ATFG+E+V YE PRP++GIHR V VLFR
Sbjct: 70  LVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFR 129

Query: 126 QLGRQTVY--APGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGR 173
           Q  R+ ++   P  R +FNTR FA  Y+LGLPVAAV+FN QRE+ +  R
Sbjct: 130 QKQRRVIFPNIPS-RDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

[Close]

BLAST of CmoCh11G009450 vs. TAIR 10
Match: AT2G27550.1 (centroradialis )

HSP 1 Score: 209.1 bits (531), Expect = 2.9e-54
Identity = 98/171 (57.31%), Postives = 131/171 (76.61%), Query Frame = 0


Query: 6   DPLVIGRVIGDVIDSFTRSISIRATYN-NREISNGCELKPSQVVNQPRVEIGGTDLRTFF 65
           DPL++GRVIGDV+D+  +++ +  TYN ++++ NG EL PS V  +P+VE+ G D+R+FF
Sbjct: 7   DPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFF 66

Query: 66  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLF 125
           TLVM DPD P PSDP LRE+LHW+VTDIP TT  +FG+EI+ YE PRP +GIHR V +LF
Sbjct: 67  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLF 126

Query: 126 RQLGRQTVYA-PGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 175
           +Q  R +V + P +R  FNTR+FA   +LGLPVAAV+FNCQRE+ +  RRR
Sbjct: 127 KQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAA--RRR 175

The following BLAST results are available for this feature:

BLAST of CmoCh11G009450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WI9	9.1e-85	80.70	Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV...	[more]
Q9SXZ2	2.6e-79	76.92	Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2	[more]
Q8VWH2	4.4e-79	77.98	Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT...	[more]
Q9S7R5	7.0e-77	75.74	Protein TWIN SISTER of FT OS=Arabidopsis thaliana OX=3702 GN=TSF PE=2 SV=1	[more]
Q9FIT4	1.5e-55	59.66	Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana OX=3702 GN=BFT PE=3 SV=1	[more]

BLAST of CmoCh11G009450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F141	1.4e-104	100.00	protein HEADING DATE 3A OS=Cucurbita moschata OX=3662 GN=LOC111441191 PE=3 SV=1	[more]
A6YE10	4.7e-100	99.44	FTL2 OS=Cucurbita moschata OX=3662 PE=2 SV=1	[more]
A6XN27	1.2e-98	97.21	Flowering locus T-like 2 OS=Cucurbita maxima OX=3661 GN=FTL2 PE=2 SV=1	[more]
A0A6J1D9F0	3.5e-95	92.74	protein HEADING DATE 3A OS=Momordica charantia OX=3673 GN=LOC111018250 PE=3 SV=1	[more]
B9ZYL0	1.0e-94	92.18	FT-like protein OS=Cucumis sativus OX=3659 GN=CsFT PE=2 SV=1	[more]

BLAST of CmoCh11G009450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933924.1	2.9e-104	100.00	protein HEADING DATE 3A [Cucurbita moschata]	[more]
ABR20499.1	9.7e-100	99.44	FTL2 [Cucurbita moschata]	[more]
XP_023520641.1	1.3e-99	98.88	protein HEADING DATE 3A [Cucurbita pepo subsp. pepo] >KAG6588265.1 Protein HEADI...	[more]
XP_022973471.1	2.4e-98	97.21	protein HEADING DATE 3A [Cucurbita maxima] >ABI94606.1 flowering locus T-like 2 ...	[more]
XP_022149957.1	7.2e-95	92.74	protein HEADING DATE 3A [Momordica charantia]	[more]

BLAST of CmoCh11G009450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65480.1	1.8e-80	76.92	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT4G20370.1	5.0e-78	75.74	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G62040.1	1.1e-56	59.66	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G03840.1	9.1e-56	59.17	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT2G27550.1	2.9e-54	57.31	centroradialis	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008914	Phosphatidylethanolamine-binding protein	PFAM	PF01161	PBP	coord: 51..160 e-value: 1.0E-12 score: 48.5
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 3..170 e-value: 9.5E-59 score: 200.0
IPR036610	PEBP-like superfamily	SUPERFAMILY	49777	PEBP-like	coord: 12..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..185
None	No IPR available	PANTHER	PTHR11362:SF125	PROTEIN, PUTATIVE-RELATED	coord: 4..173
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	PANTHER	PTHR11362	PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN	coord: 4..173
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	CDD	cd00866	PEBP_euk	coord: 27..163 e-value: 1.67421E-44 score: 142.898
IPR001858	Phosphatidylethanolamine-binding, conserved site	PROSITE	PS01220	PBP	coord: 64..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G009450.1	CmoCh11G009450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm