CmoCh11G009420 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G009420
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Acyl carrier protein
Location	Cmo_Chr11: 4898550 .. 4902374 (-)
RNA-Seq Expression	CmoCh11G009420
Synteny	CmoCh11G009420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTATTGGATCATATCACAAGGGGCCATTGAGATGCTAAAATTGTAATGCAACTAAATAACGCTTATTTTGTTGTGGGAACTTAATAGATTCTTCAATGTTTAAGGTACTTTGAGGCCCTTGGATATGCTGGGACTGTTATTATTTTTATCAGATCCCTTGTGTGGTTCTAAGTCGATTCCTATCTAGTGTGATGTATGGAATATATGACAACGGTGGAGTGTTAGAGTACTATTGCTCGGTCATGTCATGTAGATTCGAGCGGACGTTCAATTGCTTCGATTTGAATTATCTGGAGGATGCCTTACTATTTTATCAAAAAGATACCATCAAACCAAGATGACAATCAAATCTATTTCTCTCGATAGAAGCCCAAAGAGATGAATAGGGTCCTAAACAATGATAGATATGTATAAAACAAGTCCGTATGCATATTCCTAATCCTAAATGGAATGTAAGGACGTAGGGATCCATAATGTTTCCATTATGTTTACAAGTCACATATGCATATTCCTAAGAACATTCTTAAGAACGTAGGGATCATTATGTTTGAGATGTAAAAATCTAAATGGAATGTAAGGATGTAGGGATCCATTATATTTAATAGAGAGATAATCCATTATATTTACGAGAGATAATCCATTATATTTACGAACAAATCTATATGTAAACATAGTATCAAATACGTTCGGATGACCTTAGTAATTTTAATTCATTTAGAAGATGGGTTTTCTCTTCATGACATATAGGAAAGGTAATTAATGTTAAAGATATTAATGTTATTTTTAAAGATATTAACTAATTTTAAAAAATAAACAAAATATTAATAATTTCTACATAAAATTAACGTTTTTAAAGATATTAACTAATTTTAAAAAATTTTAGAATATTTTTTAAACAAAATATTTTTCAAATTTTGTATTATTAAAATTTTTGAAAATTTAGAGTTATGTATTTTTTAGATAATAATATTCTTATTAATTAACCGGAAAAAAAAATATATTATTATACGTTTCTCTTACTTCGTTCGTTGCTCTGCGTCAAAAACCGCATAAAACCTCTCTCACGAGCAGCCATTTCTTCGAGCTCTCGAAACTGCATATATCAGTTCCAATGGCGGCGAGGAATTCTCTACTGAAGTATATTAGGGTTCACGTACAGGCCCTGCCCAAATCCAATACCCCCGTTCTCTATGTCCACCCCTTCAATGCGATTCGACGCCGTCTCTTCTCCGAGGAGGTGAGGGGTTCTTTTCTTGACAAATCGGAAGTCGCTGACCGCGTCATTTCCGTTGTCAAGAAATTTCAGAAGGTCGATCCTTGCAAGGTATGAGAAATACTCTATTCCTTTCATGATTGATTTTGATTTAATGTGTCTGATATCAAATTACGCAATTAAGTTTCTGTGAGCTACGCTTCGCGTTTGCAGTGGCTTTCTGTTCGTTTATTAACTTTGAATTTTAGGGTTGATTTGGTTTGTGATCTACTAGTGAGAACGTATTGTGCGTTTTCATTGTACTTGCAAATTAGGGATGTGTATCTATGTTCTAAAGTATTAAAAACATATTGAAATAGGATGCATTACTCAATAGAAGTTTTTAGATGGACACGACTCTCCACAAGGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCTCCAAAATGCCTCATACCAATGGAGATAGTATTCTTTGATTATAAACTCATGATCATTCCCTAAATTAACCGCTGTGGGACTTTCATCATCCAACACCTCCCCTCGAACAAAGTACGCCTCCCCTTAATCGAGGCTCGACTCCTTTGAAGTCTTAGTCATTTTTTACTATACCTTTGAGGAGGCTTGACTCCTTTTCTTTTGGAGTCGTTTGTTCGACATTTGAGGATTTGCCAATCTATTGGCACGACTAAGTTTAGGGCATGTCTCTGATACAATGTTAGATGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGCTTCCCCAAAAGGTCTCATACCAATGGAGATAGTATTCTTTGATTATAAACCCATGTCATTCCCTAAATTAACTGATGTGGGACTTTCATCATCCAACAGAAGTATGGTTGATGAAGTATATTTTCTTACCCCCACCAATGGAACCTCAACTCTCAGCCTTCAAGCTATTCCTCTTCGGCAGATTCTTCTTCCAGTGAAGTTTTTCATTTGTATTATCCTTCTCAAAGATATCATTAACTAACATGGGCTTGCATGATTTGGAAATGTGTTTGAGCATTGATGTTAGATTTGGTATACATTTTCGAAAGCTTCACCTTTTACTGAAACTCTTAATTTTGAAGAGTTTACAAACAATAACTCCAGTCCCATTAATGACATTTAAATGACTGATGAATCTTCGATTCAAATTTTGTTTGAACATGCCCCTTCTGTGGGTTTCAAAACACCTTCTGAAGCTTCCCTGAAGGCTTTTGAGTCTACCTATCATTATCTTATTCTCGAAAATTTTGGCTTTATTCTTCATTTCATCCGTTCATTGAGGATAATTCTTTGAATACTGATTTAATCGAAGAAAGTTGTTCAAGTCTTTTAGCCCCCCATATGAAGCAAGTTGCCTCTTCACCTTCTTATCCTTCACAGTTTTTACTTCCCCATACTTGCAACCAAAATGTTGTATCCCCTTTGAATCCAGATTCTTTATTAACTAGAGGAGTTCTCCACTTGACAAAATACCATGCTCCTCTTTCACATGATTCTGATTCCAACGTTAGCATTAAAAAGTGTTGAATCAGTTATGGAGCCTAACTTGGAGGATGGTGTTCTTGAAGATTCTTATTTTGAAGCTTTTGGTTCATTATTTTAGGAAGATGACAATGATACTCTTCTTCTTCCTTTATAAATTCTATTGTTCCCTCCATTCAAATACCCCACAGCAACTTGTTTGTCACACCACTTTGCCCTTCTCCCTAAAGGGAAGATTCAGATGCACCTCCTCCATCATAGACCTCCTATATCCGTGTGCACCTCACAAGCCTCGAATGGACTCGTCCAACGCCCCTAAAGGTAAAGAGATGCAAGTTTAGAACAAATGATTAAGACTCTCCTCATTCCTCCGGTAAAGAATGAACCATTCCAGTTACACACAGGAAAATAGAAAGAGAAATCCTTTTTTTTGGTTTTTGAATTGTCTGCTGTCATGTGGATTTTCTTTTTCATCCTTTCTTAAATTGTAGGATCTCAATTATTCATATGAAAATACTTGTTTAGGTAGAGTACCAGGTGCATTTGAAACTCGCATAGAAATTTTAAGCACTGCATTCATTTCTATCTTTCTTTTTTCACGAGTTGATAATGCATATTATACATTCTCTGCCAGGTTACTCCAACGGCCCATTTTCAAAATGATTTAGGATTGGACAGTTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGTTTTGAAATTCCTGATAATGAATCAGACAAAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAGTCCGAAGCTGCACATGCTTTCACTCGGGTTTCTCCTATCTTGACGAGAAATTAGGTACCGTTAGACTTCCCTTATTTATCCCACTGTATTTTTATTTCGCTCGAAACTGGGTTGAGCCAGCTTCAAGCTGCATAAGTTGATGCAAACTGTTATTGGCTAAAATGAATCAACTGAGCCTATATTTCAATAATGATTTGATGAGCTTCTCCCGTTAACTTATTTGTGAACTAGTTCAACATGC

mRNA sequence

ATGTCTTATTGGATCATATCACAAGGGGCCATTGAGATGCTAAAATTCCATTTCTTCGAGCTCTCGAAACTGCATATATCAGTTCCAATGGCGGCGAGGAATTCTCTACTGAAGTATATTAGGGTTCACGTACAGGCCCTGCCCAAATCCAATACCCCCGTTCTCTATGTCCACCCCTTCAATGCGATTCGACGCCGTCTCTTCTCCGAGGAGGTGAGGGGTTCTTTTCTTGACAAATCGGAAGTCGCTGACCGCGTCATTTCCGTTGTCAAGAAATTTCAGAAGGTCGATCCTTGCAAGGTTACTCCAACGGCCCATTTTCAAAATGATTTAGGATTGGACAGTTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGTTTTGAAATTCCTGATAATGAATCAGACAAAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAGTCCGAAGCTGCACATGCTTTCACTCGGGTTTCTCCTATCTTGACGAGAAATTAGGTACCGTTAGACTTCCCTTATTTATCCCACTGTATTTTTATTTCGCTCGAAACTGGGTTGAGCCAGCTTCAAGCTGCATAAGTTGATGCAAACTGTTATTGGCTAAAATGAATCAACTGAGCCTATATTTCAATAATGATTTGATGAGCTTCTCCCGTTAACTTATTTGTGAACTAGTTCAACATGC

Coding sequence (CDS)

ATGTCTTATTGGATCATATCACAAGGGGCCATTGAGATGCTAAAATTCCATTTCTTCGAGCTCTCGAAACTGCATATATCAGTTCCAATGGCGGCGAGGAATTCTCTACTGAAGTATATTAGGGTTCACGTACAGGCCCTGCCCAAATCCAATACCCCCGTTCTCTATGTCCACCCCTTCAATGCGATTCGACGCCGTCTCTTCTCCGAGGAGGTGAGGGGTTCTTTTCTTGACAAATCGGAAGTCGCTGACCGCGTCATTTCCGTTGTCAAGAAATTTCAGAAGGTCGATCCTTGCAAGGTTACTCCAACGGCCCATTTTCAAAATGATTTAGGATTGGACAGTTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGTTTTGAAATTCCTGATAATGAATCAGACAAAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAG

Protein sequence

MSYWIISQGAIEMLKFHFFELSKLHISVPMAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVDFIASHPQAK

Homology

[Close]

BLAST of CmoCh11G009420 vs. ExPASy Swiss-Prot
Match: O80800 (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.7e-44
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MAAR ++L+Y+RV+V   P    P   V PF+ + RR FSEEVRGSFLDKSEV DRV+SV
Sbjct: 1   MAARGAMLRYLRVNVN--PTIQNPRECVLPFSILLRR-FSEEVRGSFLDKSEVTDRVLSV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VK FQKVDP KVTP A+FQNDLGLDSLD+VEVVMALEEEF FEIPDNE+DKI +I+LAVD
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 150 FIASHPQAK 159
           FIASHPQAK
Sbjct: 121 FIASHPQAK 126

[Close]

BLAST of CmoCh11G009420 vs. ExPASy Swiss-Prot
Match: P53665 (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP1 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.9e-28
Identity = 64/128 (50.00%), Postives = 89/128 (69.53%), Query Frame = 0


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MA RN++L+++RV VQ L  + + + ++        R FS       L +  V DRV+ V
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIGFLGTI-----RSFSS--HDDHLSREAVVDRVLDV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VK F KVDP KVTP  HFQNDLGLDSLDTVE+VMA+EEEF+ EIPD E+DKI++ +LA++
Sbjct: 61  VKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIE 120

Query: 150 FIASHPQA 158
           ++ +HP +
Sbjct: 121 YVYNHPMS 121

[Close]

BLAST of CmoCh11G009420 vs. ExPASy Swiss-Prot
Match: P11943 (Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=nuo-12 PE=1 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 1.8e-20
Identity = 59/115 (51.30%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 44  VQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISVVKKFQKV-DPCKVT 103
           VQA+PK       V  F A+  R +S    G  L K EV  R+  V+  F KV DP  +T
Sbjct: 31  VQAVPK-------VAAFQAV--RFYS---AGGHLKKDEVFSRIAQVLSGFDKVNDPKNIT 90

Query: 104 PTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVDFIASHPQA 158
            TAHF NDLGLDSLDTVEVVMA+EEEF  EIPD ++D+I++++ AV++I S P A
Sbjct: 91  ETAHFANDLGLDSLDTVEVVMAIEEEFSIEIPDKDADQIHSVDKAVEYILSQPDA 133

[Close]

BLAST of CmoCh11G009420 vs. ExPASy Swiss-Prot
Match: Q10217 (Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4H3.09 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.4e-17
Identity = 42/81 (51.85%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 79  KSEVADRVISVVKKFQKV-DPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNE 138
           + +   R++ VV  F K+ DP KVTPT+ F NDLGLDSLD VEVVMA+EEEF  +IPD +
Sbjct: 32  RPDAEKRILKVVSSFDKIQDPKKVTPTSTFANDLGLDSLDAVEVVMAIEEEFSIQIPDKD 91

Query: 139 SDKINAINLAVDFIASHPQAK 159
           +D+I ++  A+ +I  +P+AK
Sbjct: 92  ADEITSVGDAISYITKNPEAK 112

[Close]

BLAST of CmoCh11G009420 vs. ExPASy Swiss-Prot
Match: P80920 (Acyl carrier protein OS=Leucothrix mucor OX=45248 GN=acpP PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 8.5e-15
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 80  SEVADRVISVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESD 139
           S++  RV +VV +   VD  +VT  A F +DLG DSLDTVE+VMALEEEF  EIPD E++
Sbjct: 2   SDIEQRVKNVVVEQLGVDEAEVTNAASFVDDLGADSLDTVELVMALEEEFGTEIPDEEAE 61

Query: 140 KINAINLAVDFIASH 155
           KI  + LA+D++ SH
Sbjct: 62  KITTVQLAIDYVKSH 76

[Close]

BLAST of CmoCh11G009420 vs. ExPASy TrEMBL
Match: A0A6J1F0C9 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111441193 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV
Sbjct: 1   MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD
Sbjct: 61  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 120

Query: 150 FIASHPQAK 159
           FIASHPQAK
Sbjct: 121 FIASHPQAK 129

[Close]

BLAST of CmoCh11G009420 vs. ExPASy TrEMBL
Match: A0A6J1ICI9 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111472491 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.6e-64
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MAARNSLLKYIRVHVQALPKSNTP+LYVHPFNAIRRRLFSEE RGSFLDKSEVADRVISV
Sbjct: 1   MAARNSLLKYIRVHVQALPKSNTPILYVHPFNAIRRRLFSEEARGSFLDKSEVADRVISV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD
Sbjct: 61  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 120

Query: 150 FIASHPQAK 159
           FIASHPQAK
Sbjct: 121 FIASHPQAK 129

[Close]

BLAST of CmoCh11G009420 vs. ExPASy TrEMBL
Match: A0A6J1DS37 (Acyl carrier protein OS=Momordica charantia OX=3673 GN=LOC111023875 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 9.0e-60
Identity = 118/129 (91.47%), Postives = 125/129 (96.90%), Query Frame = 0


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MAARNSLLKY+RVHVQALPK+N+P+LY HPFNAIRRRLFSEEVRGSFLDKSEV +RV+SV
Sbjct: 1   MAARNSLLKYLRVHVQALPKTNSPILYSHPFNAIRRRLFSEEVRGSFLDKSEVTERVVSV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VKKFQKVDP KVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNE+DKIN INLAVD
Sbjct: 61  VKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINTINLAVD 120

Query: 150 FIASHPQAK 159
           FIASHPQAK
Sbjct: 121 FIASHPQAK 129

[Close]

BLAST of CmoCh11G009420 vs. ExPASy TrEMBL
Match: A0A6J1JJI6 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111485676 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59
Identity = 119/129 (92.25%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MAARNSLLK++RVHVQALPK+N+P+ YV+PFNAIRRRLFSEEVRGSFLDKSEV DRVISV
Sbjct: 1   MAARNSLLKHLRVHVQALPKTNSPIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVISV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VKKFQKVDP KVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNE+DKINAINLAVD
Sbjct: 61  VKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVD 120

Query: 150 FIASHPQAK 159
           FIASHPQAK
Sbjct: 121 FIASHPQAK 129

[Close]

BLAST of CmoCh11G009420 vs. ExPASy TrEMBL
Match: A0A6J1HCR2 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111461639 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.4e-59
Identity = 118/129 (91.47%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MAARNSLLK++RVHVQALPK+N+P+ YV+PFNAIRRRLFSEEVRGSFLDKSEV DRVISV
Sbjct: 1   MAARNSLLKHLRVHVQALPKTNSPIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVISV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VKKFQKVDP KVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNE+DKINAINLAVD
Sbjct: 61  VKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVD 120

Query: 150 FIASHPQAK 159
           FIASHP+AK
Sbjct: 121 FIASHPKAK 129

[Close]

BLAST of CmoCh11G009420 vs. NCBI nr
Match: KAG7022181.1 (Acyl carrier protein 2, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.9 bits (694), Expect = 3.4e-69
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 17  HFFELSKLHISVPMAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSF 76
           HFFELSKLHISVPMAARNSLLK IRVHVQALPKSNTPVLYV+PFNAIRR LFS+EVRGSF
Sbjct: 39  HFFELSKLHISVPMAARNSLLKSIRVHVQALPKSNTPVLYVNPFNAIRRCLFSQEVRGSF 98

Query: 77  LDKSEVADRVISVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDN 136
           LDKSEVADRVISVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDN
Sbjct: 99  LDKSEVADRVISVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDN 158

Query: 137 ESDKINAINLAVDFIASHPQAK 159
           ESDKINAINLAVDFIASHPQAK
Sbjct: 159 ESDKINAINLAVDFIASHPQAK 180

[Close]

BLAST of CmoCh11G009420 vs. NCBI nr
Match: XP_022933926.1 (acyl carrier protein 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 255.8 bits (652), Expect = 2.5e-64
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV
Sbjct: 1   MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD
Sbjct: 61  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 120

Query: 150 FIASHPQAK 159
           FIASHPQAK
Sbjct: 121 FIASHPQAK 129

[Close]

BLAST of CmoCh11G009420 vs. NCBI nr
Match: XP_023520634.1 (acyl carrier protein 2, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.4 bits (651), Expect = 3.3e-64
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MAARNSLLKYIRVHVQALPKSNTP+LYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV
Sbjct: 1   MAARNSLLKYIRVHVQALPKSNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD
Sbjct: 61  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 120

Query: 150 FIASHPQAK 159
           FIASHPQAK
Sbjct: 121 FIASHPQAK 129

[Close]

BLAST of CmoCh11G009420 vs. NCBI nr
Match: XP_022973900.1 (acyl carrier protein 2, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 253.8 bits (647), Expect = 9.5e-64
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MAARNSLLKYIRVHVQALPKSNTP+LYVHPFNAIRRRLFSEE RGSFLDKSEVADRVISV
Sbjct: 1   MAARNSLLKYIRVHVQALPKSNTPILYVHPFNAIRRRLFSEEARGSFLDKSEVADRVISV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD
Sbjct: 61  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 120

Query: 150 FIASHPQAK 159
           FIASHPQAK
Sbjct: 121 FIASHPQAK 129

[Close]

BLAST of CmoCh11G009420 vs. NCBI nr
Match: KAG6588262.1 (Acyl carrier protein 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 249.6 bits (636), Expect = 1.8e-62
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MAARNSLLK IRVHVQALPKSNTPVLYV+PFNAIRRRLFSEEVRGSFLDKSEVADRVISV
Sbjct: 1   MAARNSLLKSIRVHVQALPKSNTPVLYVNPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD
Sbjct: 61  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 120

Query: 150 FIASHPQAK 159
           FIASHPQAK
Sbjct: 121 FIASHPQAK 129

[Close]

BLAST of CmoCh11G009420 vs. TAIR 10
Match: AT1G65290.1 (mitochondrial acyl carrier protein 2 )

HSP 1 Score: 177.9 bits (450), Expect = 6.2e-45
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MAAR ++L+Y+RV+V   P    P   V PF+ + RR FSEEVRGSFLDKSEV DRV+SV
Sbjct: 1   MAARGAMLRYLRVNVN--PTIQNPRECVLPFSILLRR-FSEEVRGSFLDKSEVTDRVLSV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VK FQKVDP KVTP A+FQNDLGLDSLD+VEVVMALEEEF FEIPDNE+DKI +I+LAVD
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 150 FIASHPQAK 159
           FIASHPQAK
Sbjct: 121 FIASHPQAK 126

[Close]

BLAST of CmoCh11G009420 vs. TAIR 10
Match: AT2G44620.1 (mitochondrial acyl carrier protein 1 )

HSP 1 Score: 125.9 bits (315), Expect = 2.8e-29
Identity = 64/128 (50.00%), Postives = 89/128 (69.53%), Query Frame = 0


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MA RN++L+++RV VQ L  + + + ++        R FS       L +  V DRV+ V
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIGFLGTI-----RSFSS--HDDHLSREAVVDRVLDV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VK F KVDP KVTP  HFQNDLGLDSLDTVE+VMA+EEEF+ EIPD E+DKI++ +LA++
Sbjct: 61  VKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIE 120

Query: 150 FIASHPQA 158
           ++ +HP +
Sbjct: 121 YVYNHPMS 121

[Close]

BLAST of CmoCh11G009420 vs. TAIR 10
Match: AT5G47630.1 (mitochondrial acyl carrier protein 3 )

HSP 1 Score: 78.6 bits (192), Expect = 5.1e-15
Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 33  RNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISVVKK 92
           R+S+L+++R+ V   P S   +   + F +I    F+ E       + ++  RVI +VKK
Sbjct: 5   RSSILQHLRLRVSVRPTS--LLQNENGFKSIGIFNFTSEAAADG-GQDQILSRVIELVKK 64

Query: 93  FQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVDFIA 152
           + K +  +VT  A FQ DL LDSLD  E+VMA+EEEF  EIPD ++DK+        +I 
Sbjct: 65  YDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYIL 124

Query: 153 SHPQAK 159
           S    K
Sbjct: 125 SETPTK 127

[Close]

BLAST of CmoCh11G009420 vs. TAIR 10
Match: AT5G47630.2 (mitochondrial acyl carrier protein 3 )

HSP 1 Score: 78.6 bits (192), Expect = 5.1e-15
Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 33  RNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISVVKK 92
           R+S+L+++R+ V   P S   +   + F +I    F+ E       + ++  RVI +VKK
Sbjct: 5   RSSILQHLRLRVSVRPTS--LLQNENGFKSIGIFNFTSEAAADG-GQDQILSRVIELVKK 64

Query: 93  FQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVDFIA 152
           + K +  +VT  A FQ DL LDSLD  E+VMA+EEEF  EIPD ++DK+        +I 
Sbjct: 65  YDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYIL 124

Query: 153 SHPQAK 159
           S    K
Sbjct: 125 SETPTK 127

[Close]

BLAST of CmoCh11G009420 vs. TAIR 10
Match: AT3G05020.1 (acyl carrier protein 1 )

HSP 1 Score: 59.3 bits (142), Expect = 3.2e-09
Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 0


Query: 63  IRRRLFSEEVRGSFLDKSEVADRVISVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVV 122
           +RR + S  +  S   K E  ++V ++VKK   + P K         DLG DSLDTVE+V
Sbjct: 41  LRRSIPSRRLSVSCAAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIV 100

Query: 123 MALEEEFRFEIPDNESDKINAINLAVDFI 152
           M LEEEF  ++ + ++ KI  +  A + I
Sbjct: 101 MGLEEEFNIQMAEEKAQKIATVEQAAELI 129

The following BLAST results are available for this feature:

BLAST of CmoCh11G009420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80800	8.7e-44	73.64	Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 ...	[more]
P53665	3.9e-28	50.00	Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP1 ...	[more]
P11943	1.8e-20	51.30	Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74...	[more]
Q10217	2.4e-17	51.85	Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strai...	[more]
P80920	8.5e-15	54.67	Acyl carrier protein OS=Leucothrix mucor OX=45248 GN=acpP PE=1 SV=2	[more]

BLAST of CmoCh11G009420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F0C9	1.2e-64	100.00	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111441193 PE=3 SV=1	[more]
A0A6J1ICI9	4.6e-64	98.45	Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111472491 PE=3 SV=1	[more]
A0A6J1DS37	9.0e-60	91.47	Acyl carrier protein OS=Momordica charantia OX=3673 GN=LOC111023875 PE=3 SV=1	[more]
A0A6J1JJI6	1.2e-59	92.25	Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111485676 PE=3 SV=1	[more]
A0A6J1HCR2	3.4e-59	91.47	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111461639 PE=3 SV=1	[more]

BLAST of CmoCh11G009420 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022181.1	3.4e-69	97.18	Acyl carrier protein 2, mitochondrial, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_022933926.1	2.5e-64	100.00	acyl carrier protein 2, mitochondrial-like [Cucurbita moschata]	[more]
XP_023520634.1	3.3e-64	99.22	acyl carrier protein 2, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
XP_022973900.1	9.5e-64	98.45	acyl carrier protein 2, mitochondrial-like [Cucurbita maxima]	[more]
KAG6588262.1	1.8e-62	98.45	Acyl carrier protein 2, mitochondrial, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of CmoCh11G009420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65290.1	6.2e-45	73.64	mitochondrial acyl carrier protein 2	[more]
AT2G44620.1	2.8e-29	50.00	mitochondrial acyl carrier protein 1	[more]
AT5G47630.1	5.1e-15	37.30	mitochondrial acyl carrier protein 3	[more]
AT5G47630.2	5.1e-15	37.30	mitochondrial acyl carrier protein 3	[more]
AT3G05020.1	3.2e-09	37.08	acyl carrier protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 85..136 e-value: 5.8E-9 score: 36.2
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 80..155 score: 18.75794
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 69..157 e-value: 2.7E-27 score: 96.8
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 78..154
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 80..154 e-value: 2.5E-25 score: 86.2
IPR003231	Acyl carrier protein (ACP)	PANTHER	PTHR20863	ACYL CARRIER PROTEIN	coord: 30..158
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 81..155 score: 16.869526
None	No IPR available	PANTHER	PTHR20863:SF63	ACYL CARRIER PROTEIN 2, MITOCHONDRIAL	coord: 30..158
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 110..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G009420.1	CmoCh11G009420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
molecular_function	GO:0000035	acyl binding
molecular_function	GO:0000036	acyl carrier activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0031177	phosphopantetheine binding