CmoCh11G008550 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G008550
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Armadillo repeat-containing protein 8
Location	Cmo_Chr11: 4360112 .. 4361539 (+)
RNA-Seq Expression	CmoCh11G008550
Synteny	CmoCh11G008550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGGTTTGCGTTGCTCTCAAAGCTCCGAGGGGTTCTCTCTGCTGTGGCCTCGGCGCCATTTCCCATCCCAGTAGCTCTCTCTGGACTGGGACGATGCCAACCTCAGCTTCTTCTGCGACTCCCAAGCCTTCCTCCGAGCTCGTCGCTCGGTTGACGGCCGCCGACGCCGCCGTCAAGCTGAAGGCCTTGAGAGACATCAAGAATCAGATCATTGGAAACCGCACCAAGAAGCTGTCCTTCATCAAGCTCGGCGTTGTCCCCCATGTTGCTGCCGTTCTCTCCTCCACTTCTGACCCCAACATTCTCGTCCAGTCCGCTGCTGTTCTTGGCAGCTTTTCCTGCGGCGTCAACGTTGGTGTTTCCGCCGTTATCGATGCTGGAGCCTTCCCTCGATTGCTTCGGTTGCTTTCCGATCCCGATCCCAAGGTGTCCCTCTCTTCGACTTTTCTCTTGTTTTTTTTTTTTCTTTTCTTTTCTATCGATTTTAATCCAATTTGGGAATTGCATTTTTGGGGAAATTGAGGAGTATCTGGTGTTGGGCAATTGCAATTTGCATTTCTGCGCCTAATTTTAAGTTACAAAGGCTTGGATTGTATCTTCTTTAGTTGATTAAAGCATCAATTTCATAACTTAATTTTAAGTTCCAGTTCTGTGGAGTCGACCATTTCTCTAATCTTCTCTATTATGGCCTCTTCGAACTACAAGAAATGTTCGGTTCAAATGAAAAAGAAGATCTCCTTGGAGCTTGGAACTGGACTAGTTTTTAAAGGTAGCAAAGCTAGACTTTTCGATTGTGGGAAGGCAACCCCTCTCTCTAATCTCTTTTGGCTTGGTTAGCAGATTCCTTAAATACTCTTTTAGAACTACCTTTTGATATCCGGTTTTGTAATTAGTCAGAAAACAAACAGCTATTATCAACAAGAACAAGTTGAGCAACATGCACATTTTATCAACAATGAACAAAGAGGAAATTTGAAGAATAAGAGAGAAACAACCGATTTATAGTGGTTTGATCCAAATATTGATCTACATCCACTTAGGCACTTCCATTAGATTATATCAAGCCAGATGTAGCTCTTGAACGATACAGTGAGATTGCATTCGTCTTCTTCACTACTCCAATAACTCGAACATTGCAGTGTGCTTCCCATGAACCCTATATAAATCACTACACGAAGGACTCACACTCTCAGAGAAATCTCTCTTCAGTAAAGAGAAAAATACTTAGCCCACTCTCAATAAGAAAAACAAAGACAAGGACCTATTTTTCACTCTCTGAAAACAATTAAATCAATCAGGTACAGATGCTCGCTGCCGTGCTAAACACATGCTCCAGCTGTAGGGATAACAGAATTTTGCTGTGTAGCAGCACATCCCGCATGACATATAACTTCATCAGCTCCGCCTTAAGTCAAGCTGATTCATAA

mRNA sequence

GGAGGTTTGCGTTGCTCTCAAAGCTCCGAGGGGTTCTCTCTGCTGTGGCCTCGGCGCCATTTCCCATCCCAGTAGCTCTCTCTGGACTGGGACGATGCCAACCTCAGCTTCTTCTGCGACTCCCAAGCCTTCCTCCGAGCTCGTCGCTCGGTTGACGGCCGCCGACGCCGCCGTCAAGCTGAAGGCCTTGAGAGACATCAAGAATCAGATCATTGGAAACCGCACCAAGAAGCTGTCCTTCATCAAGCTCGGCGTTGTCCCCCATGTTGCTGCCGTTCTCTCCTCCACTTCTGACCCCAACATTCTCGTCCAGTCCGCTGCTGTTCTTGGCAGCTTTTCCTGCGGCGTCAACGTTGGTGTTTCCGCCGTTATCGATGCTGGAGCCTTCCCTCGATTGCTTCGGTTGCTTTCCGATCCCGATCCCAAGGTACAGATGCTCGCTGCCGTGCTAAACACATGCTCCAGCTGTAGGGATAACAGAATTTTGCTGTGTAGCAGCACATCCCGCATGACATATAACTTCATCAGCTCCGCCTTAAGTCAAGCTGATTCATAA

Coding sequence (CDS)

ATGCCAACCTCAGCTTCTTCTGCGACTCCCAAGCCTTCCTCCGAGCTCGTCGCTCGGTTGACGGCCGCCGACGCCGCCGTCAAGCTGAAGGCCTTGAGAGACATCAAGAATCAGATCATTGGAAACCGCACCAAGAAGCTGTCCTTCATCAAGCTCGGCGTTGTCCCCCATGTTGCTGCCGTTCTCTCCTCCACTTCTGACCCCAACATTCTCGTCCAGTCCGCTGCTGTTCTTGGCAGCTTTTCCTGCGGCGTCAACGTTGGTGTTTCCGCCGTTATCGATGCTGGAGCCTTCCCTCGATTGCTTCGGTTGCTTTCCGATCCCGATCCCAAGGTACAGATGCTCGCTGCCGTGCTAAACACATGCTCCAGCTGTAGGGATAACAGAATTTTGCTGTGTAGCAGCACATCCCGCATGACATATAACTTCATCAGCTCCGCCTTAAGTCAAGCTGATTCATAA

Protein sequence

MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKVQMLAAVLNTCSSCRDNRILLCSSTSRMTYNFISSALSQADS

Homology

[Close]

BLAST of CmoCh11G008550 vs. ExPASy Swiss-Prot
Match: Q2KI54 (Armadillo repeat-containing protein 8 OS=Bos taurus OX=9913 GN=ARMC8 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.0e-06
Identity = 38/109 (34.86%), Postives = 53/109 (48.62%), Query Frame = 0


Query: 4   SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL- 63
           S  S     S   V RL   D    L+ + D+KN +IGN  +K + I LG VP +  +L 
Sbjct: 12  SVLSEVTASSRHYVDRLFDPDPQKVLQGVIDMKNAVIGNNKQKANLIVLGAVPRLLYLLQ 71

Query: 64  SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPK 112
             TS   +  + A VLGS + G    V +++D    P LL+ L  PD K
Sbjct: 72  QETSSTELKTECAVVLGSLAMGTENNVKSLLDCHIIPALLQGLLSPDLK 120

[Close]

BLAST of CmoCh11G008550 vs. ExPASy Swiss-Prot
Match: Q8IUR7 (Armadillo repeat-containing protein 8 OS=Homo sapiens OX=9606 GN=ARMC8 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 7.0e-06
Identity = 38/109 (34.86%), Postives = 53/109 (48.62%), Query Frame = 0


Query: 4   SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL- 63
           S  S     S   V RL   D    L+ + D+KN +IGN  +K + I LG VP +  +L 
Sbjct: 12  SVLSEVTASSRHYVDRLFDPDPQKVLQGVIDMKNAVIGNNKQKANLIVLGAVPRLLYLLQ 71

Query: 64  SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPK 112
             TS   +  + A VLGS + G    V +++D    P LL+ L  PD K
Sbjct: 72  QETSSTELKTECAVVLGSLAMGTENNVKSLLDCHIIPALLQGLLSPDLK 120

[Close]

BLAST of CmoCh11G008550 vs. ExPASy Swiss-Prot
Match: Q9DBR3 (Armadillo repeat-containing protein 8 OS=Mus musculus OX=10090 GN=Armc8 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 7.0e-06
Identity = 38/109 (34.86%), Postives = 53/109 (48.62%), Query Frame = 0


Query: 4   SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL- 63
           S  S     S   V RL   D    L+ + D+KN +IGN  +K + I LG VP +  +L 
Sbjct: 12  SVLSEVTASSRHYVDRLFDPDPQKVLQGVIDMKNAVIGNNKQKANLIVLGAVPRLLYLLQ 71

Query: 64  SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPK 112
             TS   +  + A VLGS + G    V +++D    P LL+ L  PD K
Sbjct: 72  QETSSTELKTECAVVLGSLAMGTENNVKSLLDCHIIPALLQGLLSPDLK 120

[Close]

BLAST of CmoCh11G008550 vs. ExPASy Swiss-Prot
Match: Q5R6S3 (Armadillo repeat-containing protein 8 OS=Pongo abelii OX=9601 GN=ARMC8 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.0e-06
Identity = 38/109 (34.86%), Postives = 53/109 (48.62%), Query Frame = 0


Query: 4   SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL- 63
           S  S     S   V RL   D    L+ + D+KN +IGN  +K + I LG VP +  +L 
Sbjct: 12  SVLSEVTASSRHYVDRLFDPDPQKVLQGVIDMKNAVIGNNKQKANLIVLGAVPRLLYLLQ 71

Query: 64  SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPK 112
             TS   +  + A VLGS + G    V +++D    P LL+ L  PD K
Sbjct: 72  QETSSTELKTECAVVLGSLAMGTENNVKSLLDCHIIPALLQGLLSPDLK 120

[Close]

BLAST of CmoCh11G008550 vs. ExPASy Swiss-Prot
Match: Q68FK4 (Armadillo repeat-containing protein 8 OS=Xenopus laevis OX=8355 GN=armc8 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.7e-05
Identity = 40/117 (34.19%), Postives = 56/117 (47.86%), Query Frame = 0


Query: 4   SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL- 63
           S  S     S   V RL   D    L+ + D+KN +IGN  +K + I LG VP +  +L 
Sbjct: 12  SVLSEVTASSRHYVDRLFDPDPQKVLQGVIDMKNAVIGNNKQKANLIVLGAVPRLLYLLQ 71

Query: 64  SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKVQMLAAVL 120
             TS   +  + A VLGS S G    V +++D    P LL+ L   D  +Q + A L
Sbjct: 72  QETSSTELKTECAVVLGSLSMGTENNVKSLLDCNIIPALLQGLLSSD--LQFIEACL 126

[Close]

BLAST of CmoCh11G008550 vs. ExPASy TrEMBL
Match: A0A6J1EFV6 (Armadillo repeat-containing protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111433796 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.8e-49
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60
           MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA
Sbjct: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60

Query: 61  VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV 113
           VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV
Sbjct: 61  VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV 112

[Close]

BLAST of CmoCh11G008550 vs. ExPASy TrEMBL
Match: A0A6J1HQT3 (Armadillo repeat-containing protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111466520 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.2e-48
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60
           MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA
Sbjct: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60

Query: 61  VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV 113
           VLSSTSDPNILVQSAAVLGSFSCGV+VGVSAV+DAGAFPRLLRLLSDPDPKV
Sbjct: 61  VLSSTSDPNILVQSAAVLGSFSCGVDVGVSAVLDAGAFPRLLRLLSDPDPKV 112

[Close]

BLAST of CmoCh11G008550 vs. ExPASy TrEMBL
Match: A0A6J1H8W8 (Armadillo repeat-containing protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111461619 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.5e-46
Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60
           MPTSASSA PKPSSELV+RLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA
Sbjct: 1   MPTSASSAIPKPSSELVSRLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60

Query: 61  VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV 113
           +LSSTSDPNILVQSAAVLGSF+CGV+ GVSAV+DAGAFPRLLRLL+DPDPKV
Sbjct: 61  ILSSTSDPNILVQSAAVLGSFACGVDAGVSAVLDAGAFPRLLRLLADPDPKV 112

[Close]

BLAST of CmoCh11G008550 vs. ExPASy TrEMBL
Match: A0A6J1JC02 (Armadillo repeat-containing protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111485402 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.2e-46
Identity = 103/112 (91.96%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60
           MPTSASSA PKPSSELV+RLTAADAAVKLKALRDIKNQIIGNRTKKLSF+KLGVVPHVAA
Sbjct: 1   MPTSASSAIPKPSSELVSRLTAADAAVKLKALRDIKNQIIGNRTKKLSFVKLGVVPHVAA 60

Query: 61  VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV 113
           +LSSTSDPNILVQSAAVLGSF+CGV+ GVSAV+DAGAFPRLLRLL+DPDPKV
Sbjct: 61  ILSSTSDPNILVQSAAVLGSFACGVDAGVSAVLDAGAFPRLLRLLADPDPKV 112

[Close]

BLAST of CmoCh11G008550 vs. ExPASy TrEMBL
Match: A0A5D3D5L9 (Armadillo repeat-containing protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00510 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 7.9e-45
Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60
           MPTSASSA PKPSS+L+ARLT ADAAV LKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA
Sbjct: 1   MPTSASSAIPKPSSDLIARLTVADAAVNLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60

Query: 61  VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV 113
           +LSSTSDPNILVQSAAVLGSF+CGV+ GVSAV+DAGAFP+LLRLL+DPDPKV
Sbjct: 61  ILSSTSDPNILVQSAAVLGSFACGVDAGVSAVLDAGAFPKLLRLLADPDPKV 112

[Close]

BLAST of CmoCh11G008550 vs. NCBI nr
Match: XP_022926791.1 (uncharacterized protein C26H5.04-like isoform X1 [Cucurbita moschata] >XP_022926798.1 uncharacterized protein C26H5.04-like isoform X1 [Cucurbita moschata] >XP_022926804.1 uncharacterized protein C26H5.04-like isoform X1 [Cucurbita moschata] >XP_022926813.1 uncharacterized protein C26H5.04-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 205.3 bits (521), Expect = 3.8e-49
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60
           MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA
Sbjct: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60

Query: 61  VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV 113
           VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV
Sbjct: 61  VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV 112

[Close]

BLAST of CmoCh11G008550 vs. NCBI nr
Match: KAG7022085.1 (Armadillo repeat-containing protein 8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 202.6 bits (514), Expect = 2.4e-48
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60
           MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA
Sbjct: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60

Query: 61  VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV 113
           VLSSTSDPNILVQSAAVLGSFSCGV+VGVSAV+DAGAFPRLLRLLSDPDPKV
Sbjct: 61  VLSSTSDPNILVQSAAVLGSFSCGVDVGVSAVLDAGAFPRLLRLLSDPDPKV 112

[Close]

BLAST of CmoCh11G008550 vs. NCBI nr
Match: XP_022966972.1 (uncharacterized protein C26H5.04-like isoform X1 [Cucurbita maxima] >XP_022966981.1 uncharacterized protein C26H5.04-like isoform X1 [Cucurbita maxima] >XP_022966989.1 uncharacterized protein C26H5.04-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 202.6 bits (514), Expect = 2.4e-48
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60
           MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA
Sbjct: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60

Query: 61  VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV 113
           VLSSTSDPNILVQSAAVLGSFSCGV+VGVSAV+DAGAFPRLLRLLSDPDPKV
Sbjct: 61  VLSSTSDPNILVQSAAVLGSFSCGVDVGVSAVLDAGAFPRLLRLLSDPDPKV 112

[Close]

BLAST of CmoCh11G008550 vs. NCBI nr
Match: XP_023530333.1 (uncharacterized protein C26H5.04-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023530334.1 uncharacterized protein C26H5.04-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023530335.1 uncharacterized protein C26H5.04-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202.6 bits (514), Expect = 2.4e-48
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60
           MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA
Sbjct: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60

Query: 61  VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV 113
           VLSSTSDPNILVQSAAVLGSFSCGV+VGVSAV+DAGAFPRLLRLLSDPDPKV
Sbjct: 61  VLSSTSDPNILVQSAAVLGSFSCGVDVGVSAVLDAGAFPRLLRLLSDPDPKV 112

[Close]

BLAST of CmoCh11G008550 vs. NCBI nr
Match: KAG6588187.1 (Armadillo repeat-containing protein 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202.6 bits (514), Expect = 2.4e-48
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60
           MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA
Sbjct: 1   MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA 60

Query: 61  VLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDPKV 113
           VLSSTSDPNILVQSAAVLGSFSCGV+VGVSAV+DAGAFPRLLRLLSDPDPKV
Sbjct: 61  VLSSTSDPNILVQSAAVLGSFSCGVDVGVSAVLDAGAFPRLLRLLSDPDPKV 112

[Close]

BLAST of CmoCh11G008550 vs. TAIR 10
Match: AT1G51350.1 (ARM repeat superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 8.7e-28
Identity = 69/124 (55.65%), Postives = 88/124 (70.97%), Query Frame = 0


Query: 1   MPTSASSATPKPS--------SELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKL 60
           MPT+ +S+    S        S++ +RL ++D  VKLKALR++KNQIIGNRTKKLSF+KL
Sbjct: 1   MPTTTTSSASSSSSASGNNRQSDVFSRLASSDPEVKLKALREVKNQIIGNRTKKLSFLKL 60

Query: 61  GVVPHVAAVLSSTSDP----NILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDP 113
           G +P +A+VL+   D     NILVQSAA LGSF+CG   GV AV+DAG FP LLRLL++ 
Sbjct: 61  GAIPAIASVLADADDSDECNNILVQSAAALGSFACGFEAGVQAVLDAGVFPHLLRLLTNT 120

The following BLAST results are available for this feature:

BLAST of CmoCh11G008550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2KI54	7.0e-06	34.86	Armadillo repeat-containing protein 8 OS=Bos taurus OX=9913 GN=ARMC8 PE=2 SV=1	[more]
Q8IUR7	7.0e-06	34.86	Armadillo repeat-containing protein 8 OS=Homo sapiens OX=9606 GN=ARMC8 PE=1 SV=2	[more]
Q9DBR3	7.0e-06	34.86	Armadillo repeat-containing protein 8 OS=Mus musculus OX=10090 GN=Armc8 PE=1 SV=...	[more]
Q5R6S3	7.0e-06	34.86	Armadillo repeat-containing protein 8 OS=Pongo abelii OX=9601 GN=ARMC8 PE=2 SV=1	[more]
Q68FK4	2.7e-05	34.19	Armadillo repeat-containing protein 8 OS=Xenopus laevis OX=8355 GN=armc8 PE=2 SV...	[more]

BLAST of CmoCh11G008550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EFV6	1.8e-49	100.00	Armadillo repeat-containing protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111433...	[more]
A0A6J1HQT3	1.2e-48	98.21	Armadillo repeat-containing protein 8 OS=Cucurbita maxima OX=3661 GN=LOC11146652...	[more]
A0A6J1H8W8	2.5e-46	92.86	Armadillo repeat-containing protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111461...	[more]
A0A6J1JC02	3.2e-46	91.96	Armadillo repeat-containing protein 8 OS=Cucurbita maxima OX=3661 GN=LOC11148540...	[more]
A0A5D3D5L9	7.9e-45	89.29	Armadillo repeat-containing protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of CmoCh11G008550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926791.1	3.8e-49	100.00	uncharacterized protein C26H5.04-like isoform X1 [Cucurbita moschata] >XP_022926...	[more]
KAG7022085.1	2.4e-48	98.21	Armadillo repeat-containing protein 8 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022966972.1	2.4e-48	98.21	uncharacterized protein C26H5.04-like isoform X1 [Cucurbita maxima] >XP_02296698...	[more]
XP_023530333.1	2.4e-48	98.21	uncharacterized protein C26H5.04-like isoform X1 [Cucurbita pepo subsp. pepo] >X...	[more]
KAG6588187.1	2.4e-48	98.21	Armadillo repeat-containing protein 8, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of CmoCh11G008550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51350.1	8.7e-28	55.65	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 12..148 e-value: 1.1E-19 score: 72.7
IPR000225	Armadillo	PFAM	PF00514	Arm	coord: 89..117 e-value: 1.5E-5 score: 24.9
IPR038739	Armadillo-type fold containing protein ARMC8/Vid28	PANTHER	PTHR15651	ARMADILLO REPEAT-CONTAINING PROTEIN 8	coord: 10..121
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 16..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G008550.1	CmoCh11G008550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0034657	GID complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding