CmoCh11G008200 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAGAAAAGAAAGAGAATCTCAAGAAAGTCGCTCACGCTTTGTTTACGTTGGCATTCCCAACGTCTGAAACCCCAACTTCCCCCATTTCCGTTCCGTCTCTTCCTCTTTCTCTCTCTTTTTTCGATCCAAATTCTCAAAAATTACACCATTTTCCGTTCAAATTTCTTCCATCAGTTCACTGAATTGCAGGGTTTTTCGCCGCTTGATCCAGTCTCAGGGTTAGCCATGGCGGCGACTCGGTTCTGGACTTCTTCCTTCTTCTTTCTCCTTTTCGTAGCCCTAACTTCCGTTCTGCAGGTTGCTTTTGCCAACTCCGAAGGCGACGCTCTCTATACTCTCCGTCGGAGCTTGACCGATCCTGATAACGTGCTTCAGAGTTGGGATCCTACTCTCGTCAACCCCTGTACTTGGTTCCACATCACTTGTAACCAGGACAACCGCGTTACCCGAGTGTACGGTTTCTGTTTCTTTGTTTCTTTTTACTATTTGATTAGTTTTTCAACTGTTTTCTTTTATCTGATCTTTATTTAGAATCCTGGAATTTTCCGTTACGCTTTTCGTTGATTTTTTACTGTCTTCGTATCTTTTTGTGTTGTGCGGTTTCGTTCTTGTATTATTTTCTGTTTTGGACGAGGATTCAATTGATCGTTTTGCGAAATTTGTTGTTCGTTGTATTTAATTATTGTCGGATGGGGGCTGTCTGTCTTGTCTGTGAAGTGAAACGATTTCTACTGCTTAAAGATGGACGATAGTCTTTTGAGGAAAGTGAAATCCAACACTGTGGTGTTAGAGTCTTGTTCAGGACATATCTCTTTACTTGTCTAAAAGCTTGTGTACTTTTGGCTTGTTGTTGGCGCTGGCCGCTGATCAGAAGTCCGATTTTATTTTGCAGGGACTTGGGCAATTCCAATCTGTCTGGACATCTGGTTCCTGAACTAGGAAGGCTCGAGCACCTGCAATATCTGTATGTTGTTTAATCTTAATGTTTCCTTCTTCGTGGTGCTACTAATTGTAGCTTCACCTATGTTCTTTGATTGATATGATTTGTCAATAGTTCTATAGGGTTATTTAAGTTATTTCTTGAAATAGTTTCTTGAAAGAGAATTATTTTTTGGGGTCTTGTTTCTACCTTATGGAAGTACTTCCAAAATCCATGAAAAACTAGTAGGATTTGAAATGGCAGTTTCATCAACTAGCAGATAGAATTCAAGGACTACAATACCACTGAGGAGAATTGGACAGCTTCTTTCCCACAAACAACTTCCAAATCCTACTAGCTCTTATACTTGCCTAAAACAGTTTATCCCCAACCCTACCCCAATACAGTACAAAGTTCAGTTGAATGGGCCCGTGCTTACATCTCTTCTAGCCATTTTCCAATTTGTACCCCCATAATTCCATTGCTACCCTTTTCTTGTAACGCCGAGTAGTAAGTAGTCTATCTAAGGAGAGGTCTATCACAAATTAACCCTAGAACTTGTATTTGTCTGTTCCTCACTTTCTTGATTACTTCTGATGTAAATCTCCTGTGATGTGTTAATCATTTATGTGAGCATGGGTTTAGTACTTTAATCTGGTTTTGTTCTGATTGTTGATTTTTTTGTACTCTCTGGCTACTAAATGTGTAGGGAACTTTACAAAAACAACATTCATGGAACTATCCCAGATGAGCTTGGAAACCTGAAGAGCCTCATCAGTTTGGACTTGTATAACAACAACATCACTGGAAGGATTCCAATTTCATTGGGGAAATTGAAATCTCTTGTGTTCTTGTGAGTTTCATTTTATGTTGCTCATCCTTGTTTAGCTTGGTTGTGTTGTATTAAGGGTTTTTATTTTCTTTCTATCTCCAATTTTTATTGACCAACAGTATTGATAATTGATGGTATGATCATAATTTTATAAGAAGTTATTGCTTGTGAACATTTGATTTTTTATAATCCACTTAACATTGTTTTAATGAAAAACTTCCTTTAATCCATGTTTTAGGAACAGAATTTTTAAAACATTCTGATGAATTTCTTTTCTAGTGGCCCTTTCTTTTCCTAATATTTTTTTCCTGTACTTTTATTCTTTTTTGCAGACGGCTTAATGACAACCGATTAAATGGACCAATTCCAAGAGAACTTACTGGAATTACGAGCCTTAAAGTGGTGTAAGTCTTTGTATAATTTTTTCCTTTTTCCATTTCTTTTTTGGGTAAGAAACTGCGCTTAGAGATATGGAAAAAATGTTCAAGGGCATAAAATAAACAAGCCCACAAAAGGAACCCTTGCTTTGATGGATCACTCTTTAAATTTTGCGCTACGTCATGCAATCTTTTAATGATGGATTATGTCTCCTTTGTTTCAGAGATGTCTCAAATAATGACTTGTGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAAGTAGGCTTCTGTATTTCTTTCTTACTCATTCCATAGTTCGTTCCTCCCTGTTTTTATTCTATTACTATTCCATATTTGAATTGCATCGAAGATTGCGGAGTAACAACTCCTGCAAACATGAACCAACAGGGAAAATGAGGAGAGAATGAACAGTACTTTTATGATGTGTTTTTATCATATGCCGTGGAATTAATCCCCCTTGTTGCTGTGTTTAGATCAAAGTTAGGGTCTGAAATTGATGTATCTAGAAGAGATATATTGTTACTCTTATCATGTGTTTTTAGTTTTAAATTCCCTTGTATTGCTGTGCTTAGGCGCTGAAATTAATGTATCTAGAAGAGATACATTATTATTAGGCCCCGTTTCATAACCTTTGAGATGCCTGAACTCCATAGTAGAAAAAGCGTTCCCACCATCTTATTAAACCATCTCTTTAACTAATCACTATCCTCCTTCCCGGCACACTCCTAACCACACAATAGATGACTAGGAGCCACTGCTCTTATTACTCATCTACCCTTCCCTCGCACAAATCATTATTCTGGTTCAGATCCTCTAGTTGACTTCTGAGCTTCTCAATTGGTTGGCTGGCGTAAATCTCACTATTGGGCATTGGGCCTACAACTTGTAATGATTGGAAGTCATCTCAGAGTTGGGCCTACAACTTGTAGGCTGGGAAATTAAGAGTTAAATAATCAGAACGAGTACATGTGCACATTGTCTGCCCACTGTAGCTTTGTTCGTATTACCGTTCACGTTTATTTTGTTTGGTGCAGCTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTGTTGGGACTTGCTAGCTATGACACAAATTGCACATAGAAGAAGGGTAAGGTGATGCTACAAAATTACAGCTTCAGAATGAGATAGTAAAAGTGTTATTTTCACTCTCTAGTGAACTGGGGATTATATTACTAAATCCAAAATTACAAATTAGTGTTTGTAAAGTGTAACGCCAAATGATTCGGTATTTGTATTGTAACTCGTGTATTTTTCTTCTGCCACGACATTGAATTTGTGCTAATGTAATTCTACCAACTAGTCTCTACTTGTTTATTCATTTTGCTATCTGTTCAGTAAAGACAGCAGGAATTTATCTTATTTTGGTTTCTCTTTTCTTAGTAATTTTCGTTTTTGAATCCATTGTGGAATGGAGTCAAAATTTGTGAATTTGCATTGATGAGGTTATCTGTTTAAGTTGGGCCTATCCCATACTATGATTAAAGCTGTTTTCTTCCTCTTCATTGAATGCACATTCAATGCTTGCCAAATGAAACATGTCAATCACCCAACCTTTGGATGGTTGTAATGTAATAAGGTTGGTATTCATATTTGATAAGATACCATATTATCTATTCATTGTCACGTCACGGCAATATTATTTTGAAGATTTTAACCATAGACAGACGTTTCCATTTGGTATTGGCAGTTGCATGA AAAAAAAGAAAAGAAAGAGAATCTCAAGAAAGTCGCTCACGCTTTGTTTACGTTGGCATTCCCAACGTCTGAAACCCCAACTTCCCCCATTTCCGTTCCGTCTCTTCCTCTTTCTCTCTCTTTTTTCGATCCAAATTCTCAAAAATTACACCATTTTCCGTTCAAATTTCTTCCATCAGTTCACTGAATTGCAGGGTTTTTCGCCGCTTGATCCAGTCTCAGGGTTAGCCATGGCGGCGACTCGGTTCTGGACTTCTTCCTTCTTCTTTCTCCTTTTCGTAGCCCTAACTTCCGTTCTGCAGGTTGCTTTTGCCAACTCCGAAGGCGACGCTCTCTATACTCTCCGTCGGAGCTTGACCGATCCTGATAACGTGCTTCAGAGTTGGGATCCTACTCTCGTCAACCCCTGTACTTGGTTCCACATCACTTGTAACCAGGACAACCGCGTTACCCGAGTGGACTTGGGCAATTCCAATCTGTCTGGACATCTGGTTCCTGAACTAGGAAGGCTCGAGCACCTGCAATATCTGGAACTTTACAAAAACAACATTCATGGAACTATCCCAGATGAGCTTGGAAACCTGAAGAGCCTCATCAGTTTGGACTTGTATAACAACAACATCACTGGAAGGATTCCAATTTCATTGGGGAAATTGAAATCTCTTGTGTTCTTAGATGTCTCAAATAATGACTTGTGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAAACGTTTCCATTTGGTATTGGCAGTTGCATGA ATGGCGGCGACTCGGTTCTGGACTTCTTCCTTCTTCTTTCTCCTTTTCGTAGCCCTAACTTCCGTTCTGCAGGTTGCTTTTGCCAACTCCGAAGGCGACGCTCTCTATACTCTCCGTCGGAGCTTGACCGATCCTGATAACGTGCTTCAGAGTTGGGATCCTACTCTCGTCAACCCCTGTACTTGGTTCCACATCACTTGTAACCAGGACAACCGCGTTACCCGAGTGGACTTGGGCAATTCCAATCTGTCTGGACATCTGGTTCCTGAACTAGGAAGGCTCGAGCACCTGCAATATCTGGAACTTTACAAAAACAACATTCATGGAACTATCCCAGATGAGCTTGGAAACCTGAAGAGCCTCATCAGTTTGGACTTGTATAACAACAACATCACTGGAAGGATTCCAATTTCATTGGGGAAATTGAAATCTCTTGTGTTCTTAGATGTCTCAAATAATGACTTGTGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAAACGTTTCCATTTGGTATTGGCAGTTGCATGA MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFLDVSNNDLCGTIPTSGPFEHIPLNKRFHLVLAVA Homology
BLAST of CmoCh11G008200 vs. ExPASy Swiss-Prot
Match: Q9FPJ5 (Leucine-rich repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRR1 PE=1 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 1.4e-69 Identity = 131/192 (68.23%), Postives = 145/192 (75.52%), Query Frame = 0
BLAST of CmoCh11G008200 vs. ExPASy Swiss-Prot
Match: Q6NQP4 (Leucine-rich repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRR2 PE=2 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 9.9e-68 Identity = 123/174 (70.69%), Postives = 139/174 (79.89%), Query Frame = 0
BLAST of CmoCh11G008200 vs. ExPASy Swiss-Prot
Match: B8ABC2 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=LRR1 PE=3 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 7.1e-66 Identity = 125/179 (69.83%), Postives = 138/179 (77.09%), Query Frame = 0
BLAST of CmoCh11G008200 vs. ExPASy Swiss-Prot
Match: Q5VQP7 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LRR1 PE=1 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 7.1e-66 Identity = 125/179 (69.83%), Postives = 138/179 (77.09%), Query Frame = 0
BLAST of CmoCh11G008200 vs. ExPASy Swiss-Prot
Match: Q94AG2 (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=SERK1 PE=1 SV=2) HSP 1 Score: 203.0 bits (515), Expect = 2.9e-51 Identity = 99/156 (63.46%), Postives = 121/156 (77.56%), Query Frame = 0
BLAST of CmoCh11G008200 vs. ExPASy TrEMBL
Match: A0A6J1ENS2 (leucine-rich repeat protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436174 PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 4.3e-90 Identity = 171/195 (87.69%), Postives = 171/195 (87.69%), Query Frame = 0
BLAST of CmoCh11G008200 vs. ExPASy TrEMBL
Match: A0A6J1HUC7 (leucine-rich repeat protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467541 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 9.6e-90 Identity = 170/195 (87.18%), Postives = 171/195 (87.69%), Query Frame = 0
BLAST of CmoCh11G008200 vs. ExPASy TrEMBL
Match: A0A6J1H928 (leucine-rich repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111461611 PE=4 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 9.3e-85 Identity = 161/195 (82.56%), Postives = 164/195 (84.10%), Query Frame = 0
BLAST of CmoCh11G008200 vs. ExPASy TrEMBL
Match: A0A6J1JGK7 (leucine-rich repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111485514 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 2.7e-84 Identity = 160/195 (82.05%), Postives = 164/195 (84.10%), Query Frame = 0
BLAST of CmoCh11G008200 vs. ExPASy TrEMBL
Match: A0A6J1DT47 (leucine-rich repeat protein 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024070 PE=4 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 7.8e-84 Identity = 160/195 (82.05%), Postives = 166/195 (85.13%), Query Frame = 0
BLAST of CmoCh11G008200 vs. NCBI nr
Match: XP_022929661.1 (leucine-rich repeat protein 1-like [Cucurbita moschata] >KAG6588157.1 Leucine-rich repeat protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 340.5 bits (872), Expect = 8.9e-90 Identity = 171/195 (87.69%), Postives = 171/195 (87.69%), Query Frame = 0
BLAST of CmoCh11G008200 vs. NCBI nr
Match: XP_022968251.1 (leucine-rich repeat protein 1-like [Cucurbita maxima]) HSP 1 Score: 339.3 bits (869), Expect = 2.0e-89 Identity = 170/195 (87.18%), Postives = 171/195 (87.69%), Query Frame = 0
BLAST of CmoCh11G008200 vs. NCBI nr
Match: XP_023531685.1 (leucine-rich repeat protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 337.0 bits (863), Expect = 9.8e-89 Identity = 169/195 (86.67%), Postives = 170/195 (87.18%), Query Frame = 0
BLAST of CmoCh11G008200 vs. NCBI nr
Match: XP_022960971.1 (leucine-rich repeat protein 1 [Cucurbita moschata] >XP_023516958.1 leucine-rich repeat protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 322.8 bits (826), Expect = 1.9e-84 Identity = 161/195 (82.56%), Postives = 164/195 (84.10%), Query Frame = 0
BLAST of CmoCh11G008200 vs. NCBI nr
Match: XP_022988206.1 (leucine-rich repeat protein 1 [Cucurbita maxima]) HSP 1 Score: 321.2 bits (822), Expect = 5.6e-84 Identity = 160/195 (82.05%), Postives = 164/195 (84.10%), Query Frame = 0
BLAST of CmoCh11G008200 vs. TAIR 10
Match: AT5G21090.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 263.8 bits (673), Expect = 9.8e-71 Identity = 131/192 (68.23%), Postives = 145/192 (75.52%), Query Frame = 0
BLAST of CmoCh11G008200 vs. TAIR 10
Match: AT3G43740.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 257.7 bits (657), Expect = 7.0e-69 Identity = 123/174 (70.69%), Postives = 139/174 (79.89%), Query Frame = 0
BLAST of CmoCh11G008200 vs. TAIR 10
Match: AT3G43740.2 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 241.9 bits (616), Expect = 4.0e-64 Identity = 123/204 (60.29%), Postives = 139/204 (68.14%), Query Frame = 0
BLAST of CmoCh11G008200 vs. TAIR 10
Match: AT1G71830.1 (somatic embryogenesis receptor-like kinase 1 ) HSP 1 Score: 203.0 bits (515), Expect = 2.1e-52 Identity = 99/156 (63.46%), Postives = 121/156 (77.56%), Query Frame = 0
BLAST of CmoCh11G008200 vs. TAIR 10
Match: AT4G33430.1 (BRI1-associated receptor kinase ) HSP 1 Score: 201.1 bits (510), Expect = 7.8e-52 Identity = 98/151 (64.90%), Postives = 118/151 (78.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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