CmoCh11G008200 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G008200
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionleucine-rich repeat protein 1-like
LocationCmo_Chr11: 4073489 .. 4077381 (+)
RNA-Seq ExpressionCmoCh11G008200
SyntenyCmoCh11G008200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAGAAAAGAAAGAGAATCTCAAGAAAGTCGCTCACGCTTTGTTTACGTTGGCATTCCCAACGTCTGAAACCCCAACTTCCCCCATTTCCGTTCCGTCTCTTCCTCTTTCTCTCTCTTTTTTCGATCCAAATTCTCAAAAATTACACCATTTTCCGTTCAAATTTCTTCCATCAGTTCACTGAATTGCAGGGTTTTTCGCCGCTTGATCCAGTCTCAGGGTTAGCCATGGCGGCGACTCGGTTCTGGACTTCTTCCTTCTTCTTTCTCCTTTTCGTAGCCCTAACTTCCGTTCTGCAGGTTGCTTTTGCCAACTCCGAAGGCGACGCTCTCTATACTCTCCGTCGGAGCTTGACCGATCCTGATAACGTGCTTCAGAGTTGGGATCCTACTCTCGTCAACCCCTGTACTTGGTTCCACATCACTTGTAACCAGGACAACCGCGTTACCCGAGTGTACGGTTTCTGTTTCTTTGTTTCTTTTTACTATTTGATTAGTTTTTCAACTGTTTTCTTTTATCTGATCTTTATTTAGAATCCTGGAATTTTCCGTTACGCTTTTCGTTGATTTTTTACTGTCTTCGTATCTTTTTGTGTTGTGCGGTTTCGTTCTTGTATTATTTTCTGTTTTGGACGAGGATTCAATTGATCGTTTTGCGAAATTTGTTGTTCGTTGTATTTAATTATTGTCGGATGGGGGCTGTCTGTCTTGTCTGTGAAGTGAAACGATTTCTACTGCTTAAAGATGGACGATAGTCTTTTGAGGAAAGTGAAATCCAACACTGTGGTGTTAGAGTCTTGTTCAGGACATATCTCTTTACTTGTCTAAAAGCTTGTGTACTTTTGGCTTGTTGTTGGCGCTGGCCGCTGATCAGAAGTCCGATTTTATTTTGCAGGGACTTGGGCAATTCCAATCTGTCTGGACATCTGGTTCCTGAACTAGGAAGGCTCGAGCACCTGCAATATCTGTATGTTGTTTAATCTTAATGTTTCCTTCTTCGTGGTGCTACTAATTGTAGCTTCACCTATGTTCTTTGATTGATATGATTTGTCAATAGTTCTATAGGGTTATTTAAGTTATTTCTTGAAATAGTTTCTTGAAAGAGAATTATTTTTTGGGGTCTTGTTTCTACCTTATGGAAGTACTTCCAAAATCCATGAAAAACTAGTAGGATTTGAAATGGCAGTTTCATCAACTAGCAGATAGAATTCAAGGACTACAATACCACTGAGGAGAATTGGACAGCTTCTTTCCCACAAACAACTTCCAAATCCTACTAGCTCTTATACTTGCCTAAAACAGTTTATCCCCAACCCTACCCCAATACAGTACAAAGTTCAGTTGAATGGGCCCGTGCTTACATCTCTTCTAGCCATTTTCCAATTTGTACCCCCATAATTCCATTGCTACCCTTTTCTTGTAACGCCGAGTAGTAAGTAGTCTATCTAAGGAGAGGTCTATCACAAATTAACCCTAGAACTTGTATTTGTCTGTTCCTCACTTTCTTGATTACTTCTGATGTAAATCTCCTGTGATGTGTTAATCATTTATGTGAGCATGGGTTTAGTACTTTAATCTGGTTTTGTTCTGATTGTTGATTTTTTTGTACTCTCTGGCTACTAAATGTGTAGGGAACTTTACAAAAACAACATTCATGGAACTATCCCAGATGAGCTTGGAAACCTGAAGAGCCTCATCAGTTTGGACTTGTATAACAACAACATCACTGGAAGGATTCCAATTTCATTGGGGAAATTGAAATCTCTTGTGTTCTTGTGAGTTTCATTTTATGTTGCTCATCCTTGTTTAGCTTGGTTGTGTTGTATTAAGGGTTTTTATTTTCTTTCTATCTCCAATTTTTATTGACCAACAGTATTGATAATTGATGGTATGATCATAATTTTATAAGAAGTTATTGCTTGTGAACATTTGATTTTTTATAATCCACTTAACATTGTTTTAATGAAAAACTTCCTTTAATCCATGTTTTAGGAACAGAATTTTTAAAACATTCTGATGAATTTCTTTTCTAGTGGCCCTTTCTTTTCCTAATATTTTTTTCCTGTACTTTTATTCTTTTTTGCAGACGGCTTAATGACAACCGATTAAATGGACCAATTCCAAGAGAACTTACTGGAATTACGAGCCTTAAAGTGGTGTAAGTCTTTGTATAATTTTTTCCTTTTTCCATTTCTTTTTTGGGTAAGAAACTGCGCTTAGAGATATGGAAAAAATGTTCAAGGGCATAAAATAAACAAGCCCACAAAAGGAACCCTTGCTTTGATGGATCACTCTTTAAATTTTGCGCTACGTCATGCAATCTTTTAATGATGGATTATGTCTCCTTTGTTTCAGAGATGTCTCAAATAATGACTTGTGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAAGTAGGCTTCTGTATTTCTTTCTTACTCATTCCATAGTTCGTTCCTCCCTGTTTTTATTCTATTACTATTCCATATTTGAATTGCATCGAAGATTGCGGAGTAACAACTCCTGCAAACATGAACCAACAGGGAAAATGAGGAGAGAATGAACAGTACTTTTATGATGTGTTTTTATCATATGCCGTGGAATTAATCCCCCTTGTTGCTGTGTTTAGATCAAAGTTAGGGTCTGAAATTGATGTATCTAGAAGAGATATATTGTTACTCTTATCATGTGTTTTTAGTTTTAAATTCCCTTGTATTGCTGTGCTTAGGCGCTGAAATTAATGTATCTAGAAGAGATACATTATTATTAGGCCCCGTTTCATAACCTTTGAGATGCCTGAACTCCATAGTAGAAAAAGCGTTCCCACCATCTTATTAAACCATCTCTTTAACTAATCACTATCCTCCTTCCCGGCACACTCCTAACCACACAATAGATGACTAGGAGCCACTGCTCTTATTACTCATCTACCCTTCCCTCGCACAAATCATTATTCTGGTTCAGATCCTCTAGTTGACTTCTGAGCTTCTCAATTGGTTGGCTGGCGTAAATCTCACTATTGGGCATTGGGCCTACAACTTGTAATGATTGGAAGTCATCTCAGAGTTGGGCCTACAACTTGTAGGCTGGGAAATTAAGAGTTAAATAATCAGAACGAGTACATGTGCACATTGTCTGCCCACTGTAGCTTTGTTCGTATTACCGTTCACGTTTATTTTGTTTGGTGCAGCTTTGAGAATAACCCTAGAATGGAAGGACCAGAATTGTTGGGACTTGCTAGCTATGACACAAATTGCACATAGAAGAAGGGTAAGGTGATGCTACAAAATTACAGCTTCAGAATGAGATAGTAAAAGTGTTATTTTCACTCTCTAGTGAACTGGGGATTATATTACTAAATCCAAAATTACAAATTAGTGTTTGTAAAGTGTAACGCCAAATGATTCGGTATTTGTATTGTAACTCGTGTATTTTTCTTCTGCCACGACATTGAATTTGTGCTAATGTAATTCTACCAACTAGTCTCTACTTGTTTATTCATTTTGCTATCTGTTCAGTAAAGACAGCAGGAATTTATCTTATTTTGGTTTCTCTTTTCTTAGTAATTTTCGTTTTTGAATCCATTGTGGAATGGAGTCAAAATTTGTGAATTTGCATTGATGAGGTTATCTGTTTAAGTTGGGCCTATCCCATACTATGATTAAAGCTGTTTTCTTCCTCTTCATTGAATGCACATTCAATGCTTGCCAAATGAAACATGTCAATCACCCAACCTTTGGATGGTTGTAATGTAATAAGGTTGGTATTCATATTTGATAAGATACCATATTATCTATTCATTGTCACGTCACGGCAATATTATTTTGAAGATTTTAACCATAGACAGACGTTTCCATTTGGTATTGGCAGTTGCATGA

mRNA sequence

AAAAAAAGAAAAGAAAGAGAATCTCAAGAAAGTCGCTCACGCTTTGTTTACGTTGGCATTCCCAACGTCTGAAACCCCAACTTCCCCCATTTCCGTTCCGTCTCTTCCTCTTTCTCTCTCTTTTTTCGATCCAAATTCTCAAAAATTACACCATTTTCCGTTCAAATTTCTTCCATCAGTTCACTGAATTGCAGGGTTTTTCGCCGCTTGATCCAGTCTCAGGGTTAGCCATGGCGGCGACTCGGTTCTGGACTTCTTCCTTCTTCTTTCTCCTTTTCGTAGCCCTAACTTCCGTTCTGCAGGTTGCTTTTGCCAACTCCGAAGGCGACGCTCTCTATACTCTCCGTCGGAGCTTGACCGATCCTGATAACGTGCTTCAGAGTTGGGATCCTACTCTCGTCAACCCCTGTACTTGGTTCCACATCACTTGTAACCAGGACAACCGCGTTACCCGAGTGGACTTGGGCAATTCCAATCTGTCTGGACATCTGGTTCCTGAACTAGGAAGGCTCGAGCACCTGCAATATCTGGAACTTTACAAAAACAACATTCATGGAACTATCCCAGATGAGCTTGGAAACCTGAAGAGCCTCATCAGTTTGGACTTGTATAACAACAACATCACTGGAAGGATTCCAATTTCATTGGGGAAATTGAAATCTCTTGTGTTCTTAGATGTCTCAAATAATGACTTGTGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAAACGTTTCCATTTGGTATTGGCAGTTGCATGA

Coding sequence (CDS)

ATGGCGGCGACTCGGTTCTGGACTTCTTCCTTCTTCTTTCTCCTTTTCGTAGCCCTAACTTCCGTTCTGCAGGTTGCTTTTGCCAACTCCGAAGGCGACGCTCTCTATACTCTCCGTCGGAGCTTGACCGATCCTGATAACGTGCTTCAGAGTTGGGATCCTACTCTCGTCAACCCCTGTACTTGGTTCCACATCACTTGTAACCAGGACAACCGCGTTACCCGAGTGGACTTGGGCAATTCCAATCTGTCTGGACATCTGGTTCCTGAACTAGGAAGGCTCGAGCACCTGCAATATCTGGAACTTTACAAAAACAACATTCATGGAACTATCCCAGATGAGCTTGGAAACCTGAAGAGCCTCATCAGTTTGGACTTGTATAACAACAACATCACTGGAAGGATTCCAATTTCATTGGGGAAATTGAAATCTCTTGTGTTCTTAGATGTCTCAAATAATGACTTGTGTGGAACAATACCAACCAGTGGACCATTTGAGCACATACCTTTAAACAAACGTTTCCATTTGGTATTGGCAGTTGCATGA

Protein sequence

MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFLDVSNNDLCGTIPTSGPFEHIPLNKRFHLVLAVA
Homology
BLAST of CmoCh11G008200 vs. ExPASy Swiss-Prot
Match: Q9FPJ5 (Leucine-rich repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRR1 PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.4e-69
Identity = 131/192 (68.23%), Postives = 145/192 (75.52%), Query Frame = 0

Query: 3   ATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPCTW 62
           A+R +    F        +++ +  ANSEGDALY LRRSLTDPD+VLQSWDPTLVNPCTW
Sbjct: 2   ASRNYRWELFAASLTLTLALIHLVEANSEGDALYALRRSLTDPDHVLQSWDPTLVNPCTW 61

Query: 63  FHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLI 122
           FH+TCNQDNRVTRVDLGNSNLSGHL PELG+LEHLQYLELYKNNI GTIP ELGNLK+LI
Sbjct: 62  FHVTCNQDNRVTRVDLGNSNLSGHLAPELGKLEHLQYLELYKNNIQGTIPSELGNLKNLI 121

Query: 123 SLDLYNNNITGRIPISLGKLKSLVFL------------------------DVSNNDLCGT 171
           SLDLYNNN+TG +P SLGKLKSLVFL                        DVS+NDLCGT
Sbjct: 122 SLDLYNNNLTGIVPTSLGKLKSLVFLRLNDNRLTGPIPRALTAIPSLKVVDVSSNDLCGT 181

BLAST of CmoCh11G008200 vs. ExPASy Swiss-Prot
Match: Q6NQP4 (Leucine-rich repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRR2 PE=2 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 9.9e-68
Identity = 123/174 (70.69%), Postives = 139/174 (79.89%), Query Frame = 0

Query: 21  SVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRVDLGN 80
           +++++  ANSEGDAL+ LRRSL+DPDNV+QSWDPTLVNPCTWFH+TCNQ ++VTR+DLGN
Sbjct: 20  ALIRLTEANSEGDALHALRRSLSDPDNVVQSWDPTLVNPCTWFHVTCNQHHQVTRLDLGN 79

Query: 81  SNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLG 140
           SNLSGHLVPELG+LEHLQYLELYKN I GTIP ELGNLKSLISLDLYNNN+TG+IP SLG
Sbjct: 80  SNLSGHLVPELGKLEHLQYLELYKNEIQGTIPSELGNLKSLISLDLYNNNLTGKIPSSLG 139

Query: 141 KLKSLVFL------------------------DVSNNDLCGTIPTSGPFEHIPL 171
           KLKSLVFL                        DVS NDLCGTIP  GPFEHIP+
Sbjct: 140 KLKSLVFLRLNENRLTGPIPRELTVISSLKVVDVSGNDLCGTIPVEGPFEHIPM 193

BLAST of CmoCh11G008200 vs. ExPASy Swiss-Prot
Match: B8ABC2 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=LRR1 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.1e-66
Identity = 125/179 (69.83%), Postives = 138/179 (77.09%), Query Frame = 0

Query: 17  VALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRV 76
           VA   V+ +A ANSEGDAL  LRRSL DP  VLQSWDPTLVNPCTWFH+TC++DNRVTR+
Sbjct: 12  VAAAVVVAMAGANSEGDALSALRRSLRDPGGVLQSWDPTLVNPCTWFHVTCDRDNRVTRL 71

Query: 77  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIP 136
           DLGN NLSGHLVPELG+L+HLQYLELYKNNI GTIP ELGNLK+LISLDLY NNI+G IP
Sbjct: 72  DLGNLNLSGHLVPELGKLDHLQYLELYKNNIQGTIPSELGNLKNLISLDLYKNNISGTIP 131

Query: 137 ISLGKLKSLVFL------------------------DVSNNDLCGTIPTSGPFEHIPLN 172
            +LGKL SLVFL                        DVS+NDLCGTIPTSGPFEHIPL+
Sbjct: 132 PTLGKLTSLVFLRLNGNRLTGPIPRELAGISSLKVVDVSSNDLCGTIPTSGPFEHIPLS 190

BLAST of CmoCh11G008200 vs. ExPASy Swiss-Prot
Match: Q5VQP7 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LRR1 PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.1e-66
Identity = 125/179 (69.83%), Postives = 138/179 (77.09%), Query Frame = 0

Query: 17  VALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRV 76
           VA   V+ +A ANSEGDAL  LRRSL DP  VLQSWDPTLVNPCTWFH+TC++DNRVTR+
Sbjct: 12  VAAAVVVAMAGANSEGDALSALRRSLRDPGGVLQSWDPTLVNPCTWFHVTCDRDNRVTRL 71

Query: 77  DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIP 136
           DLGN NLSGHLVPELG+L+HLQYLELYKNNI GTIP ELGNLK+LISLDLY NNI+G IP
Sbjct: 72  DLGNLNLSGHLVPELGKLDHLQYLELYKNNIQGTIPSELGNLKNLISLDLYKNNISGTIP 131

Query: 137 ISLGKLKSLVFL------------------------DVSNNDLCGTIPTSGPFEHIPLN 172
            +LGKL SLVFL                        DVS+NDLCGTIPTSGPFEHIPL+
Sbjct: 132 PTLGKLTSLVFLRLNGNRLTGPIPRELAGISSLKVVDVSSNDLCGTIPTSGPFEHIPLS 190

BLAST of CmoCh11G008200 vs. ExPASy Swiss-Prot
Match: Q94AG2 (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=SERK1 PE=1 SV=2)

HSP 1 Score: 203.0 bits (515), Expect = 2.9e-51
Identity = 99/156 (63.46%), Postives = 121/156 (77.56%), Query Frame = 0

Query: 13  FLLFVALTSV------LQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPCTWFHIT 72
           +++F+ L+ +      L +A AN EGDAL+TLR +L DP+NVLQSWDPTLVNPCTWFH+T
Sbjct: 5   YVVFILLSLILLPNHSLWLASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVT 64

Query: 73  CNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDL 132
           CN +N V RVDLGN+ LSGHLVPELG L++LQYLELY NNI G IP  LGNL +L+SLDL
Sbjct: 65  CNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDL 124

Query: 133 YNNNITGRIPISLGKLKSLVFLDVSNNDLCGTIPTS 163
           Y N+ +G IP SLGKL  L FL ++NN L G+IP S
Sbjct: 125 YLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMS 160

BLAST of CmoCh11G008200 vs. ExPASy TrEMBL
Match: A0A6J1ENS2 (leucine-rich repeat protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436174 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.3e-90
Identity = 171/195 (87.69%), Postives = 171/195 (87.69%), Query Frame = 0

Query: 1   MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60
           MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC
Sbjct: 1   MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60

Query: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPISLGKLKSLVFL------------------------DVSNNDLC 172
           LISLDLYNNNITGRIPISLGKLKSLVFL                        DVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPISLGKLKSLVFLRLNDNRLNGPIPRELTGITSLKVVDVSNNDLC 180

BLAST of CmoCh11G008200 vs. ExPASy TrEMBL
Match: A0A6J1HUC7 (leucine-rich repeat protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467541 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 9.6e-90
Identity = 170/195 (87.18%), Postives = 171/195 (87.69%), Query Frame = 0

Query: 1   MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60
           MAATRFWTS+FFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC
Sbjct: 1   MAATRFWTSTFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60

Query: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPISLGKLKSLVFL------------------------DVSNNDLC 172
           LISLDLYNNNITGRIPISLGKLKSLVFL                        DVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPISLGKLKSLVFLRLNDNRLNGPIPRELTGITSLKVVDVSNNDLC 180

BLAST of CmoCh11G008200 vs. ExPASy TrEMBL
Match: A0A6J1H928 (leucine-rich repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111461611 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 9.3e-85
Identity = 161/195 (82.56%), Postives = 164/195 (84.10%), Query Frame = 0

Query: 1   MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60
           MAATRFW S+FFFL  V LTSVL VA ANSEGDALYTLRRSL+DPDNVLQSWDPTLVNPC
Sbjct: 1   MAATRFWVSTFFFLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60

Query: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TWFHITCNQDNRVTR+DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRLDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPISLGKLKSLVFL------------------------DVSNNDLC 172
           LISLDLYNNNITGRIP SLGKLKSLVFL                        DVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC 180

BLAST of CmoCh11G008200 vs. ExPASy TrEMBL
Match: A0A6J1JGK7 (leucine-rich repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111485514 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.7e-84
Identity = 160/195 (82.05%), Postives = 164/195 (84.10%), Query Frame = 0

Query: 1   MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60
           MAATRFW S+FF L  V LTSVL VA ANSEGDALYTLRRSL+DPDNVLQSWDPTLVNPC
Sbjct: 1   MAATRFWVSTFFLLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60

Query: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TWFHITCNQDNRVTR+DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRLDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPISLGKLKSLVFL------------------------DVSNNDLC 172
           LISLDLYNNNITGRIP+SLGKLKSLVFL                        DVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPLSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC 180

BLAST of CmoCh11G008200 vs. ExPASy TrEMBL
Match: A0A6J1DT47 (leucine-rich repeat protein 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024070 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.8e-84
Identity = 160/195 (82.05%), Postives = 166/195 (85.13%), Query Frame = 0

Query: 1   MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60
           M AT FW SSFFFLL VAL+SVLQVA ANSEGDALYTLRRSL+DPDNVLQSWDPTLVNPC
Sbjct: 1   MVATWFWISSFFFLLLVALSSVLQVAHANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60

Query: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKN+IHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNSIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPISLGKLKSLVFL------------------------DVSNNDLC 172
           LISLDLYNNNITGRIP+SLGKLKSLVFL                        DVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPLSLGKLKSLVFLRLNDNRLNGPVPRELTGITSLKVVDVSNNDLC 180

BLAST of CmoCh11G008200 vs. NCBI nr
Match: XP_022929661.1 (leucine-rich repeat protein 1-like [Cucurbita moschata] >KAG6588157.1 Leucine-rich repeat protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 340.5 bits (872), Expect = 8.9e-90
Identity = 171/195 (87.69%), Postives = 171/195 (87.69%), Query Frame = 0

Query: 1   MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60
           MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC
Sbjct: 1   MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60

Query: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPISLGKLKSLVFL------------------------DVSNNDLC 172
           LISLDLYNNNITGRIPISLGKLKSLVFL                        DVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPISLGKLKSLVFLRLNDNRLNGPIPRELTGITSLKVVDVSNNDLC 180

BLAST of CmoCh11G008200 vs. NCBI nr
Match: XP_022968251.1 (leucine-rich repeat protein 1-like [Cucurbita maxima])

HSP 1 Score: 339.3 bits (869), Expect = 2.0e-89
Identity = 170/195 (87.18%), Postives = 171/195 (87.69%), Query Frame = 0

Query: 1   MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60
           MAATRFWTS+FFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC
Sbjct: 1   MAATRFWTSTFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60

Query: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPISLGKLKSLVFL------------------------DVSNNDLC 172
           LISLDLYNNNITGRIPISLGKLKSLVFL                        DVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPISLGKLKSLVFLRLNDNRLNGPIPRELTGITSLKVVDVSNNDLC 180

BLAST of CmoCh11G008200 vs. NCBI nr
Match: XP_023531685.1 (leucine-rich repeat protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.0 bits (863), Expect = 9.8e-89
Identity = 169/195 (86.67%), Postives = 170/195 (87.18%), Query Frame = 0

Query: 1   MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60
           MAATRFWTS+FFFLLFVAL SVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC
Sbjct: 1   MAATRFWTSTFFFLLFVALISVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60

Query: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPISLGKLKSLVFL------------------------DVSNNDLC 172
           LISLDLYNNNITGRIPISLGKLKSLVFL                        DVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPISLGKLKSLVFLRLNDNRLNGPIPRELTGITSLKVVDVSNNDLC 180

BLAST of CmoCh11G008200 vs. NCBI nr
Match: XP_022960971.1 (leucine-rich repeat protein 1 [Cucurbita moschata] >XP_023516958.1 leucine-rich repeat protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 322.8 bits (826), Expect = 1.9e-84
Identity = 161/195 (82.56%), Postives = 164/195 (84.10%), Query Frame = 0

Query: 1   MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60
           MAATRFW S+FFFL  V LTSVL VA ANSEGDALYTLRRSL+DPDNVLQSWDPTLVNPC
Sbjct: 1   MAATRFWVSTFFFLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60

Query: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TWFHITCNQDNRVTR+DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRLDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPISLGKLKSLVFL------------------------DVSNNDLC 172
           LISLDLYNNNITGRIP SLGKLKSLVFL                        DVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPFSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC 180

BLAST of CmoCh11G008200 vs. NCBI nr
Match: XP_022988206.1 (leucine-rich repeat protein 1 [Cucurbita maxima])

HSP 1 Score: 321.2 bits (822), Expect = 5.6e-84
Identity = 160/195 (82.05%), Postives = 164/195 (84.10%), Query Frame = 0

Query: 1   MAATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPC 60
           MAATRFW S+FF L  V LTSVL VA ANSEGDALYTLRRSL+DPDNVLQSWDPTLVNPC
Sbjct: 1   MAATRFWVSTFFLLFTVTLTSVLHVALANSEGDALYTLRRSLSDPDNVLQSWDPTLVNPC 60

Query: 61  TWFHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120
           TWFHITCNQDNRVTR+DLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS
Sbjct: 61  TWFHITCNQDNRVTRLDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKS 120

Query: 121 LISLDLYNNNITGRIPISLGKLKSLVFL------------------------DVSNNDLC 172
           LISLDLYNNNITGRIP+SLGKLKSLVFL                        DVSNNDLC
Sbjct: 121 LISLDLYNNNITGRIPLSLGKLKSLVFLRLNDNRLNGPIPRELTAITSLKVVDVSNNDLC 180

BLAST of CmoCh11G008200 vs. TAIR 10
Match: AT5G21090.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 263.8 bits (673), Expect = 9.8e-71
Identity = 131/192 (68.23%), Postives = 145/192 (75.52%), Query Frame = 0

Query: 3   ATRFWTSSFFFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPCTW 62
           A+R +    F        +++ +  ANSEGDALY LRRSLTDPD+VLQSWDPTLVNPCTW
Sbjct: 2   ASRNYRWELFAASLTLTLALIHLVEANSEGDALYALRRSLTDPDHVLQSWDPTLVNPCTW 61

Query: 63  FHITCNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLI 122
           FH+TCNQDNRVTRVDLGNSNLSGHL PELG+LEHLQYLELYKNNI GTIP ELGNLK+LI
Sbjct: 62  FHVTCNQDNRVTRVDLGNSNLSGHLAPELGKLEHLQYLELYKNNIQGTIPSELGNLKNLI 121

Query: 123 SLDLYNNNITGRIPISLGKLKSLVFL------------------------DVSNNDLCGT 171
           SLDLYNNN+TG +P SLGKLKSLVFL                        DVS+NDLCGT
Sbjct: 122 SLDLYNNNLTGIVPTSLGKLKSLVFLRLNDNRLTGPIPRALTAIPSLKVVDVSSNDLCGT 181

BLAST of CmoCh11G008200 vs. TAIR 10
Match: AT3G43740.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 257.7 bits (657), Expect = 7.0e-69
Identity = 123/174 (70.69%), Postives = 139/174 (79.89%), Query Frame = 0

Query: 21  SVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRVDLGN 80
           +++++  ANSEGDAL+ LRRSL+DPDNV+QSWDPTLVNPCTWFH+TCNQ ++VTR+DLGN
Sbjct: 20  ALIRLTEANSEGDALHALRRSLSDPDNVVQSWDPTLVNPCTWFHVTCNQHHQVTRLDLGN 79

Query: 81  SNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNITGRIPISLG 140
           SNLSGHLVPELG+LEHLQYLELYKN I GTIP ELGNLKSLISLDLYNNN+TG+IP SLG
Sbjct: 80  SNLSGHLVPELGKLEHLQYLELYKNEIQGTIPSELGNLKSLISLDLYNNNLTGKIPSSLG 139

Query: 141 KLKSLVFL------------------------DVSNNDLCGTIPTSGPFEHIPL 171
           KLKSLVFL                        DVS NDLCGTIP  GPFEHIP+
Sbjct: 140 KLKSLVFLRLNENRLTGPIPRELTVISSLKVVDVSGNDLCGTIPVEGPFEHIPM 193

BLAST of CmoCh11G008200 vs. TAIR 10
Match: AT3G43740.2 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 241.9 bits (616), Expect = 4.0e-64
Identity = 123/204 (60.29%), Postives = 139/204 (68.14%), Query Frame = 0

Query: 21  SVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRVDLGN 80
           +++++  ANSEGDAL+ LRRSL+DPDNV+QSWDPTLVNPCTWFH+TCNQ ++VTR+DLGN
Sbjct: 20  ALIRLTEANSEGDALHALRRSLSDPDNVVQSWDPTLVNPCTWFHVTCNQHHQVTRLDLGN 79

Query: 81  SNLSGHLVPELGRLEHLQYL------------------------------ELYKNNIHGT 140
           SNLSGHLVPELG+LEHLQYL                              ELYKN I GT
Sbjct: 80  SNLSGHLVPELGKLEHLQYLYGIITLLPFDYLKTFTLSVTHITFCFESYSELYKNEIQGT 139

Query: 141 IPDELGNLKSLISLDLYNNNITGRIPISLGKLKSLVFL---------------------- 171
           IP ELGNLKSLISLDLYNNN+TG+IP SLGKLKSLVFL                      
Sbjct: 140 IPSELGNLKSLISLDLYNNNLTGKIPSSLGKLKSLVFLRLNENRLTGPIPRELTVISSLK 199

BLAST of CmoCh11G008200 vs. TAIR 10
Match: AT1G71830.1 (somatic embryogenesis receptor-like kinase 1 )

HSP 1 Score: 203.0 bits (515), Expect = 2.1e-52
Identity = 99/156 (63.46%), Postives = 121/156 (77.56%), Query Frame = 0

Query: 13  FLLFVALTSV------LQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPCTWFHIT 72
           +++F+ L+ +      L +A AN EGDAL+TLR +L DP+NVLQSWDPTLVNPCTWFH+T
Sbjct: 5   YVVFILLSLILLPNHSLWLASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVT 64

Query: 73  CNQDNRVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDL 132
           CN +N V RVDLGN+ LSGHLVPELG L++LQYLELY NNI G IP  LGNL +L+SLDL
Sbjct: 65  CNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDL 124

Query: 133 YNNNITGRIPISLGKLKSLVFLDVSNNDLCGTIPTS 163
           Y N+ +G IP SLGKL  L FL ++NN L G+IP S
Sbjct: 125 YLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMS 160

BLAST of CmoCh11G008200 vs. TAIR 10
Match: AT4G33430.1 (BRI1-associated receptor kinase )

HSP 1 Score: 201.1 bits (510), Expect = 7.8e-52
Identity = 98/151 (64.90%), Postives = 118/151 (78.15%), Query Frame = 0

Query: 12  FFLLFVALTSVLQVAFANSEGDALYTLRRSLTDPDNVLQSWDPTLVNPCTWFHITCNQDN 71
           FF L + L  VL+V+  N+EGDAL  L+ SL DP+ VLQSWD TLV PCTWFH+TCN DN
Sbjct: 10  FFWLILVLDLVLRVS-GNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDN 69

Query: 72  RVTRVDLGNSNLSGHLVPELGRLEHLQYLELYKNNIHGTIPDELGNLKSLISLDLYNNNI 131
            VTRVDLGN+NLSG LV +LG+L +LQYLELY NNI GTIP++LGNL  L+SLDLY NN+
Sbjct: 70  SVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNL 129

Query: 132 TGRIPISLGKLKSLVFLDVSNNDLCGTIPTS 163
           +G IP +LG+LK L FL ++NN L G IP S
Sbjct: 130 SGPIPSTLGRLKKLRFLRLNNNSLSGEIPRS 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FPJ51.4e-6968.23Leucine-rich repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRR1 PE=1 SV=1[more]
Q6NQP49.9e-6870.69Leucine-rich repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRR2 PE=2 SV=1[more]
B8ABC27.1e-6669.83Leucine-rich repeat protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=LRR1 PE=... [more]
Q5VQP77.1e-6669.83Leucine-rich repeat protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LRR1 P... [more]
Q94AG22.9e-5163.46Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=SERK1... [more]
Match NameE-valueIdentityDescription
A0A6J1ENS24.3e-9087.69leucine-rich repeat protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436174... [more]
A0A6J1HUC79.6e-9087.18leucine-rich repeat protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467541 P... [more]
A0A6J1H9289.3e-8582.56leucine-rich repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111461611 PE=4... [more]
A0A6J1JGK72.7e-8482.05leucine-rich repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111485514 PE=4 S... [more]
A0A6J1DT477.8e-8482.05leucine-rich repeat protein 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC11... [more]
Match NameE-valueIdentityDescription
XP_022929661.18.9e-9087.69leucine-rich repeat protein 1-like [Cucurbita moschata] >KAG6588157.1 Leucine-ri... [more]
XP_022968251.12.0e-8987.18leucine-rich repeat protein 1-like [Cucurbita maxima][more]
XP_023531685.19.8e-8986.67leucine-rich repeat protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_022960971.11.9e-8482.56leucine-rich repeat protein 1 [Cucurbita moschata] >XP_023516958.1 leucine-rich ... [more]
XP_022988206.15.6e-8482.05leucine-rich repeat protein 1 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G21090.19.8e-7168.23Leucine-rich repeat (LRR) family protein [more]
AT3G43740.17.0e-6970.69Leucine-rich repeat (LRR) family protein [more]
AT3G43740.24.0e-6460.29Leucine-rich repeat (LRR) family protein [more]
AT1G71830.12.1e-5263.46somatic embryogenesis receptor-like kinase 1 [more]
AT4G33430.17.8e-5264.90BRI1-associated receptor kinase [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 27..175
e-value: 2.2E-47
score: 162.9
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 96..155
e-value: 4.1E-9
score: 36.1
IPR013210Leucine-rich repeat-containing N-terminal, plant-typePFAMPF08263LRRNT_2coord: 28..68
e-value: 4.9E-12
score: 46.0
NoneNo IPR availablePANTHERPTHR48054:SF26LEUCINE-RICH REPEAT PROTEIN 1coord: 17..161
NoneNo IPR availablePANTHERPTHR48054RECEPTOR KINASE-LIKE PROTEIN XA21coord: 17..161
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 29..162

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G008200.1CmoCh11G008200.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
molecular_function GO:0032440 2-alkenal reductase [NAD(P)+] activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0005515 protein binding