CmoCh11G005400 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G005400
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionEpidermal patterning factor-like protein
LocationCmo_Chr11: 2636788 .. 2637462 (-)
RNA-Seq ExpressionCmoCh11G005400
SyntenyCmoCh11G005400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTAAACAATTCCCTCTTTCTCATTCTCCCTCTCATATTCTCCCTCTCTGTCTTTCACCCCACATCAGGTAATTATCCTAATCCAACTTCCAGACATGTTTATATTCATATGTTCATAATTTTCTTAATTTTGTTGGGTGTTCTTAGTTCTGGGAATCTCAGGGAATGAGGATTCAAAGCAGAAGGAATTGGCTATTGGGTCAAGGCCACCAAAGTGCTTCAACAAGTGCTTGAATTGCAAGCCATGTGTTGCTGCTTTGGTCATTTCTCAGCGCCACAAAGGTGATGATAGTAACAACGGTGGTGTTGTTTCAAATTTGGAGGCGGCTCAAGTTCCCAAAGATGATGCCTATTATCTTCTCTCATGGAAATGCAAGTGTAAAGATAAGTACTTTCAACCTTGAAGAACAAAAAAACACTTCCATTTTTCATTGTTTCACCCAAATTTTTATGTATGCCTATGTATCATAATATAGTGATTCTTGAGAGAGTTTCTTTTTGGTGCTTTTTCTTCTGCTCTCTTTGTTCAAGGGAATGGAACCGAATGTAAATTTACAAGATTTTGATTTGAAAAACATGTGGGCATTAAGTGTGGAATGTATGAGTATTTAATGCATATAAGTTAGTTGTTTTCGTTGAATCAAATGAATGGATTGCTCATAAACTGTCC

mRNA sequence

ATGGCTTTAAACAATTCCCTCTTTCTCATTCTCCCTCTCATATTCTCCCTCTCTGTCTTTCACCCCACATCAGTTCTGGGAATCTCAGGGAATGAGGATTCAAAGCAGAAGGAATTGGCTATTGGGTCAAGGCCACCAAAGTGCTTCAACAAGTGCTTGAATTGCAAGCCATGTGTTGCTGCTTTGGTCATTTCTCAGCGCCACAAAGGTGATGATAGTAACAACGGTGGTGTTGTTTCAAATTTGGAGGCGGCTCAAGTTCCCAAAGATGATGCCTATTATCTTCTCTCATGGAAATGCAAGTGTAAAGATAAGTACTTTCAACCTTGAAGAACAAAAAAACACTTCCATTTTTCATTGTTTCACCCAAATTTTTATGTATGCCTATGTATCATAATATAGTGATTCTTGAGAGAGTTTCTTTTTGGTGCTTTTTCTTCTGCTCTCTTTGTTCAAGGGAATGGAACCGAATGTAAATTTACAAGATTTTGATTTGAAAAACATGTGGGCATTAAGTGTGGAATGTATGAGTATTTAATGCATATAAGTTAGTTGTTTTCGTTGAATCAAATGAATGGATTGCTCATAAACTGTCC

Coding sequence (CDS)

ATGGCTTTAAACAATTCCCTCTTTCTCATTCTCCCTCTCATATTCTCCCTCTCTGTCTTTCACCCCACATCAGTTCTGGGAATCTCAGGGAATGAGGATTCAAAGCAGAAGGAATTGGCTATTGGGTCAAGGCCACCAAAGTGCTTCAACAAGTGCTTGAATTGCAAGCCATGTGTTGCTGCTTTGGTCATTTCTCAGCGCCACAAAGGTGATGATAGTAACAACGGTGGTGTTGTTTCAAATTTGGAGGCGGCTCAAGTTCCCAAAGATGATGCCTATTATCTTCTCTCATGGAAATGCAAGTGTAAAGATAAGTACTTTCAACCTTGA

Protein sequence

MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP
Homology
[Close]
BLAST of CmoCh11G005400 vs. ExPASy Swiss-Prot
Match: Q1G3V9 (EPIDERMAL PATTERNING FACTOR-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=EPFL8 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.1e-08
Identity = 33/98 (33.67%), Postives = 47/98 (47.96%), Query Frame = 0 

Query: 13  LIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALV-ISQRHKGD 72
           + FSL   H   + G  G++  + KE  +GS PP C  KC NCKPC+  L  I   H  D
Sbjct: 21  IFFSLLSLH--CISGAHGHQ-QRMKESVMGSEPPVCATKCRNCKPCLPYLFDIRGAHDDD 80

Query: 73  DSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 110
           D +                + YY + W C+C+D+ F+P
Sbjct: 81  DDS----------------EPYYPVKWICRCRDRVFEP 99

[Close]
BLAST of CmoCh11G005400 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.2e-05
Identity = 35/120 (29.17%), Postives = 49/120 (40.83%), Query Frame = 0 

Query: 2   ALNNSLFLILPLIFSLSVFHPTSVL------GISGNEDSKQKELAIGSRPPKCFNKCLNC 61
           A+  S  L+LPLI  L +    S         IS      + +  +GS PP C N+C NC
Sbjct: 3   AIYKSTLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNC 62

Query: 62  KPCVA----ALVISQRHKGDDSNNGGVVSNLEAAQVPKD--DAYYLLSWKCKCKDKYFQP 110
            PC+A     L    R    +  +GG V    +     D    Y  + WKC C   ++ P
Sbjct: 63  HPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]
BLAST of CmoCh11G005400 vs. ExPASy Swiss-Prot
Match: P43212 (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04
Identity = 27/91 (29.67%), Postives = 38/91 (41.76%), Query Frame = 0 

Query: 21  HPTSVL--GISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALVISQRHKGDDSNNGGV 80
           HP +V+   +   +   +  + +GSRPP C NKC  C PC A LVI  R           
Sbjct: 444 HPKTVMVKNMGAYDKGNRTRILLGSRPPNCTNKCHGCSPCKAKLVIVHR----------- 503

Query: 81  VSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 110
                   +P++  YY   W C    K + P
Sbjct: 504 -------IMPQE--YYPQRWMCSRHGKIYHP 514

[Close]
BLAST of CmoCh11G005400 vs. ExPASy TrEMBL
Match: A0A6J1F4W6 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111440854 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.4e-56
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 60
           MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA
Sbjct: 1   MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 60

Query: 61  ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 110
           ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP
Sbjct: 61  ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 109

[Close]
BLAST of CmoCh11G005400 vs. ExPASy TrEMBL
Match: A0A6J1EZ19 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111440854 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.7e-52
Identity = 104/109 (95.41%), Postives = 104/109 (95.41%), Query Frame = 0 

Query: 1   MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 60
           MALNNSLFLILPLIFSLSVFHPT     SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA
Sbjct: 1   MALNNSLFLILPLIFSLSVFHPT-----SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 60

Query: 61  ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 110
           ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP
Sbjct: 61  ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 104

[Close]
BLAST of CmoCh11G005400 vs. ExPASy TrEMBL
Match: A0A6J1I8G8 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111470622 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 4.8e-52
Identity = 103/109 (94.50%), Postives = 106/109 (97.25%), Query Frame = 0 

Query: 1   MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 60
           MALNNSLFLILPLIFSLSVF PTSVLGI+GNEDSKQKELAIGSRPPKCFNKCLNCKPCVA
Sbjct: 67  MALNNSLFLILPLIFSLSVFLPTSVLGITGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 126

Query: 61  ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 110
           ALVISQR KG D+NNGGVVSN+EAAQVPKDDAYYLLSWKCKCKDKYFQP
Sbjct: 127 ALVISQRLKGYDNNNGGVVSNMEAAQVPKDDAYYLLSWKCKCKDKYFQP 175

[Close]
BLAST of CmoCh11G005400 vs. ExPASy TrEMBL
Match: A0A6J1I4N2 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111470622 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.5e-48
Identity = 99/109 (90.83%), Postives = 101/109 (92.66%), Query Frame = 0 

Query: 1   MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 60
           MALNNSLFLILPLIFSLSVF PT     SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA
Sbjct: 67  MALNNSLFLILPLIFSLSVFLPT-----SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 126

Query: 61  ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 110
           ALVISQR KG D+NNGGVVSN+EAAQVPKDDAYYLLSWKCKCKDKYFQP
Sbjct: 127 ALVISQRLKGYDNNNGGVVSNMEAAQVPKDDAYYLLSWKCKCKDKYFQP 170

[Close]
BLAST of CmoCh11G005400 vs. ExPASy TrEMBL
Match: A0A6J1JFP8 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111485317 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.7e-36
Identity = 84/111 (75.68%), Postives = 91/111 (81.98%), Query Frame = 0 

Query: 1   MALNNSLFLILPLIFSLSVFHPTSVLGISGNED-SKQKELAIGSRPPKCFNKCLNCKPCV 60
           MAL +SL LILPLIFSLS+ HPT     SGNED S+QKEL IGSRPP+CFNKCLNC+PCV
Sbjct: 1   MALKSSLLLILPLIFSLSLSHPT-----SGNEDSSRQKELVIGSRPPRCFNKCLNCRPCV 60

Query: 61  AALVISQRHKGDDSNNGGVVSNLEAA-QVPKDDAYYLLSWKCKCKDKYFQP 110
           AALVISQRHKG  +N     SNLEAA   P+DDAYYLLSWKCKCKDKYFQP
Sbjct: 61  AALVISQRHKGVHNN---AFSNLEAALPAPRDDAYYLLSWKCKCKDKYFQP 103

[Close]
BLAST of CmoCh11G005400 vs. NCBI nr
Match: XP_022933440.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X1 [Cucurbita moschata] >KAG6587897.1 EPIDERMAL PATTERNING FACTOR-like protein 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 228.4 bits (581), Expect = 3.0e-56
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 60
           MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA
Sbjct: 1   MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 60

Query: 61  ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 110
           ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP
Sbjct: 61  ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 109

[Close]
BLAST of CmoCh11G005400 vs. NCBI nr
Match: XP_023531006.1 (EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.4 bits (581), Expect = 3.0e-56
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 60
           MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA
Sbjct: 50  MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 109

Query: 61  ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 110
           ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP
Sbjct: 110 ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 158

[Close]
BLAST of CmoCh11G005400 vs. NCBI nr
Match: XP_022933441.1 (EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X2 [Cucurbita moschata] >KAG7021781.1 EPIDERMAL PATTERNING FACTOR-like protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.8 bits (543), Expect = 7.5e-52
Identity = 104/109 (95.41%), Postives = 104/109 (95.41%), Query Frame = 0 

Query: 1   MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 60
           MALNNSLFLILPLIFSLSVFHPT     SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA
Sbjct: 1   MALNNSLFLILPLIFSLSVFHPT-----SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 60

Query: 61  ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 110
           ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP
Sbjct: 61  ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 104

[Close]
BLAST of CmoCh11G005400 vs. NCBI nr
Match: XP_023531007.1 (EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.8 bits (543), Expect = 7.5e-52
Identity = 104/109 (95.41%), Postives = 104/109 (95.41%), Query Frame = 0 

Query: 1   MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 60
           MALNNSLFLILPLIFSLSVFHPT     SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA
Sbjct: 50  MALNNSLFLILPLIFSLSVFHPT-----SGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 109

Query: 61  ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 110
           ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP
Sbjct: 110 ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 153

[Close]
BLAST of CmoCh11G005400 vs. NCBI nr
Match: XP_022971958.1 (EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 213.4 bits (542), Expect = 9.8e-52
Identity = 103/109 (94.50%), Postives = 106/109 (97.25%), Query Frame = 0 

Query: 1   MALNNSLFLILPLIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 60
           MALNNSLFLILPLIFSLSVF PTSVLGI+GNEDSKQKELAIGSRPPKCFNKCLNCKPCVA
Sbjct: 67  MALNNSLFLILPLIFSLSVFLPTSVLGITGNEDSKQKELAIGSRPPKCFNKCLNCKPCVA 126

Query: 61  ALVISQRHKGDDSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 110
           ALVISQR KG D+NNGGVVSN+EAAQVPKDDAYYLLSWKCKCKDKYFQP
Sbjct: 127 ALVISQRLKGYDNNNGGVVSNMEAAQVPKDDAYYLLSWKCKCKDKYFQP 175

[Close]
BLAST of CmoCh11G005400 vs. TAIR 10
Match: AT1G80133.1 (unknown protein; LOCATED IN: endomembrane system; Has 154 Blast hits to 154 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-09
Identity = 33/98 (33.67%), Postives = 47/98 (47.96%), Query Frame = 0 

Query: 13  LIFSLSVFHPTSVLGISGNEDSKQKELAIGSRPPKCFNKCLNCKPCVAALV-ISQRHKGD 72
           + FSL   H   + G  G++  + KE  +GS PP C  KC NCKPC+  L  I   H  D
Sbjct: 21  IFFSLLSLH--CISGAHGHQ-QRMKESVMGSEPPVCATKCRNCKPCLPYLFDIRGAHDDD 80

Query: 73  DSNNGGVVSNLEAAQVPKDDAYYLLSWKCKCKDKYFQP 110
           D +                + YY + W C+C+D+ F+P
Sbjct: 81  DDS----------------EPYYPVKWICRCRDRVFEP 99

[Close]
BLAST of CmoCh11G005400 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 3.0e-06
Identity = 35/120 (29.17%), Postives = 49/120 (40.83%), Query Frame = 0 

Query: 2   ALNNSLFLILPLIFSLSVFHPTSVL------GISGNEDSKQKELAIGSRPPKCFNKCLNC 61
           A+  S  L+LPLI  L +    S         IS      + +  +GS PP C N+C NC
Sbjct: 3   AIYKSTLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNC 62

Query: 62  KPCVA----ALVISQRHKGDDSNNGGVVSNLEAAQVPKD--DAYYLLSWKCKCKDKYFQP 110
            PC+A     L    R    +  +GG V    +     D    Y  + WKC C   ++ P
Sbjct: 63  HPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

The following BLAST results are available for this feature:
BLAST of CmoCh11G005400 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q1G3V93.1e-0833.67EPIDERMAL PATTERNING FACTOR-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LFT54.2e-0529.17EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
P432121.2e-0429.67Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1[more]
BLAST of CmoCh11G005400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F4W61.4e-56100.00Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1EZ193.7e-5295.41Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1I8G84.8e-5294.50Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
A0A6J1I4N25.5e-4890.83Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
A0A6J1JFP83.7e-3675.68Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
BLAST of CmoCh11G005400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022933440.13.0e-56100.00EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X1 [Cucurbita moschata] >KAG6... [more]
XP_023531006.13.0e-56100.00EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X1 [Cucurbita pepo subsp. pep... [more]
XP_022933441.17.5e-5295.41EPIDERMAL PATTERNING FACTOR-like protein 8 isoform X2 [Cucurbita moschata] >KAG7... [more]
XP_023531007.17.5e-5295.41EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X2 [Cucurbita pepo subsp. pep... [more]
XP_022971958.19.8e-5294.50EPIDERMAL PATTERNING FACTOR-like protein 1 isoform X1 [Cucurbita maxima][more]
BLAST of CmoCh11G005400 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G80133.12.2e-0933.67unknown protein; LOCATED IN: endomembrane system; Has 154 Blast hits to 154 prot... [more]
AT5G10310.13.0e-0629.17unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 41..109
e-value: 8.4E-20
score: 70.5
NoneNo IPR availablePANTHERPTHR33109:SF57EPIDERMAL PATTERNING FACTOR-LIKE PROTEINcoord: 9..109
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 9..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G005400.1CmoCh11G005400.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010052 guard cell differentiation
biological_process GO:0010374 stomatal complex development
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane