CmoCh11G004990 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G004990
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Serine-rich protein-like protein
Location	Cmo_Chr11: 2411797 .. 2412402 (+)
RNA-Seq Expression	CmoCh11G004990
Synteny	CmoCh11G004990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCTTCTAGAAAATCGAGTGGGCCGGTTCTGAGGTCTCTCTCACCTTCTGGGAGATTCTATGGCTCCTATTCTTCTTCTATGTCCTCTGGCTCATCGGCTTTTGCGTCTTCTACATCAAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCTTCTCGTATTAATCTTCAACCTTCTTCTTCTCCGTCGGCGTCGTCCGTGAGATTTTCATTGGACCGGTCTATTTCTCCGAATCGGCCGATTTCTGTTTCGACTCGTATCAGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACCTGCATGTGCTCACCGACTACGCATCCTGGTTCGTTCAGATGTAGTCTCCATAAAGGCGTTCCGTCACAGCCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCGCGGAGATCGGCGATGACGAACTCTCTTGTCAGAATCGGAGGAGTTGAAGGCGATTTAGTGAAGCGTGCCTTGGCGTCCCTCATCCGGCCTTCGTCTCATAGTCAAAGGCGCCGAGCGGATTTCTGTCCGAGACCGAGCCGGCTTTCGAACATGTCGAAAGCCGATGATTTGTGA

mRNA sequence

ATGGCGGTTTCTTCTAGAAAATCGAGTGGGCCGGTTCTGAGGTCTCTCTCACCTTCTGGGAGATTCTATGGCTCCTATTCTTCTTCTATGTCCTCTGGCTCATCGGCTTTTGCGTCTTCTACATCAAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCTTCTCGTATTAATCTTCAACCTTCTTCTTCTCCGTCGGCGTCGTCCGTGAGATTTTCATTGGACCGGTCTATTTCTCCGAATCGGCCGATTTCTGTTTCGACTCGTATCAGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACCTGCATGTGCTCACCGACTACGCATCCTGGTTCGTTCAGATGTAGTCTCCATAAAGGCGTTCCGTCACAGCCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCGCGGAGATCGGCGATGACGAACTCTCTTGTCAGAATCGGAGGAGTTGAAGGCGATTTAGTGAAGCGTGCCTTGGCGTCCCTCATCCGGCCTTCGTCTCATAGTCAAAGGCGCCGAGCGGATTTCTGTCCGAGACCGAGCCGGCTTTCGAACATGTCGAAAGCCGATGATTTGTGA

Coding sequence (CDS)

ATGGCGGTTTCTTCTAGAAAATCGAGTGGGCCGGTTCTGAGGTCTCTCTCACCTTCTGGGAGATTCTATGGCTCCTATTCTTCTTCTATGTCCTCTGGCTCATCGGCTTTTGCGTCTTCTACATCAAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCTTCTCGTATTAATCTTCAACCTTCTTCTTCTCCGTCGGCGTCGTCCGTGAGATTTTCATTGGACCGGTCTATTTCTCCGAATCGGCCGATTTCTGTTTCGACTCGTATCAGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACCTGCATGTGCTCACCGACTACGCATCCTGGTTCGTTCAGATGTAGTCTCCATAAAGGCGTTCCGTCACAGCCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCGCGGAGATCGGCGATGACGAACTCTCTTGTCAGAATCGGAGGAGTTGAAGGCGATTTAGTGAAGCGTGCCTTGGCGTCCCTCATCCGGCCTTCGTCTCATAGTCAAAGGCGCCGAGCGGATTTCTGTCCGAGACCGAGCCGGCTTTCGAACATGTCGAAAGCCGATGATTTGTGA

Protein sequence

MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSRINLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQRRRADFCPRPSRLSNMSKADDL

Homology

[Close]

BLAST of CmoCh11G004990 vs. ExPASy TrEMBL
Match: A0A6J1F5M8 (uncharacterized protein LOC111441057 OS=Cucurbita moschata OX=3662 GN=LOC111441057 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.1e-99
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 202
           RRADFCPRPSRLSNMSKADDL
Sbjct: 181 RRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of CmoCh11G004990 vs. ExPASy TrEMBL
Match: A0A6J1HNK6 (uncharacterized protein LOC111465917 OS=Cucurbita maxima OX=3661 GN=LOC111465917 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 202
           RRADFCPR SRLSNMSKADDL
Sbjct: 181 RRADFCPRRSRLSNMSKADDL 201

[Close]

BLAST of CmoCh11G004990 vs. ExPASy TrEMBL
Match: A0A0A0LW36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.0e-84
Identity = 182/203 (89.66%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPT-FFRRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS  SS SSAFASSTSSFSTRN T FF RSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60

Query: 61  RINLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHP 120
           R+NLQ SSSPSASSVRFSLDRSISPNRPISV +R SGN QVVK+QS QKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 180
           GSFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSNMSKADDL 202
           QRRR DFCPRPSRLS MSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of CmoCh11G004990 vs. ExPASy TrEMBL
Match: A0A6J1JI11 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=LOC111485282 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.7e-84
Identity = 181/207 (87.44%), Postives = 189/207 (91.30%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSY-----SSSMSSGSSAFASSTSSFSTRNPT-FFRR 60
           MAVSSRKSSGP +RSLSPSGRF G Y     SSS SS SSAFASSTSSFST NPT FFRR
Sbjct: 1   MAVSSRKSSGPAMRSLSPSGRFCGFYSSSSSSSSSSSSSSAFASSTSSFSTENPTSFFRR 60

Query: 61  SVSPSRINLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSP 120
           S+SPSR++LQ SSS SASSVRF+LDRSISPNR ISV TR SGNQVVKRQSNQKRTC+CSP
Sbjct: 61  SLSPSRVHLQGSSSTSASSVRFALDRSISPNRHISVLTRGSGNQVVKRQSNQKRTCLCSP 120

Query: 121 TTHPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRP 180
           TTHPGSFRCSLHKGVPSQP+TPYSSNRLNARRSAMTNSLVRIGGVEGDLV+RALASLIRP
Sbjct: 121 TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSLVRIGGVEGDLVRRALASLIRP 180

Query: 181 SSHSQRRRADFCPRPSRLSNMSKADDL 202
           SSHSQRRRADFCPRPSRLS MSKADDL
Sbjct: 181 SSHSQRRRADFCPRPSRLSIMSKADDL 207

[Close]

BLAST of CmoCh11G004990 vs. ExPASy TrEMBL
Match: A0A6J1C124 (uncharacterized protein DDB_G0271670-like OS=Momordica charantia OX=3673 GN=LOC111007469 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.7e-84
Identity = 182/206 (88.35%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSY----SSSMSSGSSAFASSTSSFSTRNPT-FFRRS 60
           MAVSSRKSSGPVLRSLSPSGRFY SY    SSS SS SSAFASSTS+FSTRN T FFRRS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYASYSSSSSSSSSSSSSAFASSTSTFSTRNATSFFRRS 60

Query: 61  VSPSRINLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPT 120
            SP+R+NLQ SSSPSASSVRFSLDRSISPNRP+SV TR SG+QVVKRQ NQKRTCMCSPT
Sbjct: 61  TSPTRVNLQGSSSPSASSVRFSLDRSISPNRPLSVLTRSSGSQVVKRQGNQKRTCMCSPT 120

Query: 121 THPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPS 180
           THPGSFRCSLHKG PSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPS
Sbjct: 121 THPGSFRCSLHKGHPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPS 180

Query: 181 SHSQRRRADFCPRPSRLSNMSKADDL 202
           SHSQRRRADF PR SRLS MSKA+DL
Sbjct: 181 SHSQRRRADFRPRQSRLSIMSKAEDL 206

[Close]

BLAST of CmoCh11G004990 vs. NCBI nr
Match: XP_022933728.1 (uncharacterized protein LOC111441057 [Cucurbita moschata] >KAG6587861.1 hypothetical protein SDJN03_16426, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372.5 bits (955), Expect = 2.3e-99
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 202
           RRADFCPRPSRLSNMSKADDL
Sbjct: 181 RRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of CmoCh11G004990 vs. NCBI nr
Match: KAG7021750.1 (hypothetical protein SDJN02_15477, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 372.5 bits (955), Expect = 2.3e-99
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 202
           RRADFCPRPSRLSNMSKADDL
Sbjct: 181 RRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of CmoCh11G004990 vs. NCBI nr
Match: XP_023530348.1 (uncharacterized protein LOC111792947 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.5 bits (950), Expect = 8.9e-99
Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           I+LQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  IDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 202
           RRADFCPRPSRLSNMSKADDL
Sbjct: 181 RRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of CmoCh11G004990 vs. NCBI nr
Match: XP_022966156.1 (uncharacterized protein LOC111465917 [Cucurbita maxima])

HSP 1 Score: 369.0 bits (946), Expect = 2.6e-98
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 202
           RRADFCPR SRLSNMSKADDL
Sbjct: 181 RRADFCPRRSRLSNMSKADDL 201

[Close]

BLAST of CmoCh11G004990 vs. NCBI nr
Match: XP_038879100.1 (uncharacterized serine-rich protein C215.13-like [Benincasa hispida])

HSP 1 Score: 331.6 bits (849), Expect = 4.6e-87
Identity = 188/204 (92.16%), Postives = 193/204 (94.61%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSY-SSSMSSGSSAFASSTSSFSTRNPT-FFRRSVSP 60
           MAVSSRKSSGPVLRSLSPSGRFYGSY SSS SS SSAFASS+SSFSTRNPT FFRRSVSP
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSSAFASSSSSFSTRNPTSFFRRSVSP 60

Query: 61  SRINLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTH 120
           SR+NLQ SSSPSASSV FSLDRSISPNRPISV +R SGN QVVK+QSNQKRTCMCSPTTH
Sbjct: 61  SRVNLQGSSSPSASSVSFSLDRSISPNRPISVLSRTSGNHQVVKKQSNQKRTCMCSPTTH 120

Query: 121 PGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSH 180
           PGSFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLV+RALASLIRPSSH
Sbjct: 121 PGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVRRALASLIRPSSH 180

Query: 181 SQRRRADFCPRPSRLSNMSKADDL 202
           SQRRRADFCPRPSRLS MSKADDL
Sbjct: 181 SQRRRADFCPRPSRLSIMSKADDL 204

[Close]

BLAST of CmoCh11G004990 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 183.0 bits (463), Expect = 2.4e-46
Identity = 126/216 (58.33%), Postives = 149/216 (68.98%), Query Frame = 0


Query: 4   SSRKSSGPVLRSLSPSGRFYGSYSSSM-SSGSSAFASST-SSFSTRNPTFF--------- 63
           S  KS+GPVLRS SPSGRF G YS ++ SS SSAFASST SSFS+ +  FF         
Sbjct: 6   SRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHRHHESN 65

Query: 64  ---RRSVSPSRINLQPSSSPSASSVRFSLD-RSISP-NRPISVSTRISGNQVVKRQSNQK 123
               RS SP+R+NL  ++ P + S R+SLD RSISP N+ ISVS     NQ         
Sbjct: 66  HSHHRSASPTRVNLY-TAQPMSQSFRYSLDSRSISPTNKSISVSK----NQPPSHNHKIS 125

Query: 124 RTCMCSPTTHPGSFRCSLHKGVPS---QPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLV 183
           R CMCSPTTHPGSFRCSLHK V +   Q +  Y++N LN RRSAMTNSLVRIGGVEG+ V
Sbjct: 126 RRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWV 185

Query: 184 KRALASLIRPSSHSQRRRADFCPRPSRLSNMSKADD 201
           +RAL +LIRPSSH  +RRA + PRPSRLS M+KAD+
Sbjct: 186 RRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]

BLAST of CmoCh11G004990 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 174.5 bits (441), Expect = 8.7e-44
Identity = 118/216 (54.63%), Postives = 148/216 (68.52%), Query Frame = 0


Query: 4   SSRKSSGPVLRSLSPSGRFYGSYSSSM---SSGSSAFASST-SSFSTRNPTFF------- 63
           ++R +    LRS SPSGRF G YS+ M   S  SS FASST SSFS+ +  FF       
Sbjct: 8   TTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSHNQNN 67

Query: 64  ---RRSVSPSRINLQPSSSPSASSVRFSLD-RSISPNRPISVSTRISGNQVVKRQSNQKR 123
               RS SP+R+NL  +S+P   S R+S+D RSISPNR I+VS+    N    +  + +R
Sbjct: 68  HHQHRSASPTRVNLF-TSAPMTQSFRYSIDNRSISPNRSIAVSSNKPSNH--HKIPDSRR 127

Query: 124 TCMCSPTTHPGSFRCSLHKGVPS---QPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVK 183
            CMCSPTTHPGSFRCSLHK V +   Q +  Y++N LN RRSAMTNSLVRIGGVEG+ V+
Sbjct: 128 RCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVR 187

Query: 184 RALASLIRPSSHSQRRRADFCPRPSRLSNMSKADDL 202
           RAL +LIRPSSH  +RR+ + PR SRL++MSKA+DL
Sbjct: 188 RALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAEDL 220

[Close]

BLAST of CmoCh11G004990 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 174.5 bits (441), Expect = 8.7e-44
Identity = 118/216 (54.63%), Postives = 148/216 (68.52%), Query Frame = 0


Query: 4   SSRKSSGPVLRSLSPSGRFYGSYSSSM---SSGSSAFASST-SSFSTRNPTFF------- 63
           ++R +    LRS SPSGRF G YS+ M   S  SS FASST SSFS+ +  FF       
Sbjct: 8   TTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSHNQNN 67

Query: 64  ---RRSVSPSRINLQPSSSPSASSVRFSLD-RSISPNRPISVSTRISGNQVVKRQSNQKR 123
               RS SP+R+NL  +S+P   S R+S+D RSISPNR I+VS+    N    +  + +R
Sbjct: 68  HHQHRSASPTRVNLF-TSAPMTQSFRYSIDNRSISPNRSIAVSSNKPSNH--HKIPDSRR 127

Query: 124 TCMCSPTTHPGSFRCSLHKGVPS---QPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVK 183
            CMCSPTTHPGSFRCSLHK V +   Q +  Y++N LN RRSAMTNSLVRIGGVEG+ V+
Sbjct: 128 RCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVR 187

Query: 184 RALASLIRPSSHSQRRRADFCPRPSRLSNMSKADDL 202
           RAL +LIRPSSH  +RR+ + PR SRL++MSKA+DL
Sbjct: 188 RALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAEDL 220

[Close]

BLAST of CmoCh11G004990 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13
Identity = 47/109 (43.12%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 100 VKRQSNQKRTCMCSPTTHPGSFRCSLHKGVPSQPSTPYSS------NR----------LN 159
           V      KR C+CSPTTHPGSFRCS H+ +  + S   +S      NR          LN
Sbjct: 61  VSSNHQTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLN 120

Query: 160 ARRSAMTNSLVRIGGVEGDLVKRAL-ASLIRPSSHSQRRRADFCPRPSR 192
            R+ A+ NSL +IG VE +  +R+L A+L +PSS    RR +F PR SR
Sbjct: 121 LRKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of CmoCh11G004990 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 3.6e-05
Identity = 19/38 (50.00%), Postives = 29/38 (76.32%), Query Frame = 0


Query: 96  GNQVVKRQSNQKRT-CMCSPTTHPGSFRCSLHKGVPSQ 133
           G++ + RQ++  +T C+CSPTTHPGSFRC +H+ +  Q
Sbjct: 29  GSRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQ 66

The following BLAST results are available for this feature:

BLAST of CmoCh11G004990 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh11G004990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5M8	1.1e-99	100.00	uncharacterized protein LOC111441057 OS=Cucurbita moschata OX=3662 GN=LOC1114410...	[more]
A0A6J1HNK6	1.3e-98	99.50	uncharacterized protein LOC111465917 OS=Cucurbita maxima OX=3661 GN=LOC111465917...	[more]
A0A0A0LW36	1.0e-84	89.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1	[more]
A0A6J1JI11	6.7e-84	87.44	uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1C124	6.7e-84	88.35	uncharacterized protein DDB_G0271670-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of CmoCh11G004990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933728.1	2.3e-99	100.00	uncharacterized protein LOC111441057 [Cucurbita moschata] >KAG6587861.1 hypothet...	[more]
KAG7021750.1	2.3e-99	100.00	hypothetical protein SDJN02_15477, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023530348.1	8.9e-99	99.50	uncharacterized protein LOC111792947 [Cucurbita pepo subsp. pepo]	[more]
XP_022966156.1	2.6e-98	99.50	uncharacterized protein LOC111465917 [Cucurbita maxima]	[more]
XP_038879100.1	4.6e-87	92.16	uncharacterized serine-rich protein C215.13-like [Benincasa hispida]	[more]

BLAST of CmoCh11G004990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	2.4e-46	58.33	serine-rich protein-related	[more]
AT5G25280.1	8.7e-44	54.63	serine-rich protein-related	[more]
AT5G25280.2	8.7e-44	54.63	serine-rich protein-related	[more]
AT5G20370.1	1.2e-13	43.12	serine-rich protein-related	[more]
AT1G67910.1	3.6e-05	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..201
None	No IPR available	PANTHER	PTHR33132:SF75	SUBFAMILY NOT NAMED	coord: 1..201
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 1..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G004990.1	CmoCh11G004990.1	mRNA