CmoCh11G004840 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGAATGGGACTTTGCAAGGATTAAAGGCATTGGTTGGGGATGGGCAGGAGCCATCTGGGTATACAGTATTGTTACTTACTTCCCTCTTGATATTCTCAAATTCACAATCCGATACGCCCTCAGCGGCAAGGCCTGGGACAACGTACTCGACAATAAGGTCTGTGCTCGAACTTTTGTGATGTCATTCACTTATCGCATCTCATGCTAATAAATTTTCTCGGCCATTATACTACGTAGACAGCCTTTACAACCAAGAAGGATTACGGAATAGGCGAAAGAGAAGCACAATGGGCAACAGAACAACGGACGATGCACGGCCTGCAGCCACCAGAAACCATATTTCATGAGAGTAGCAGCCACGAGGATCATTCAGAGATTGCTGAGCAAGCCAAGAAAAGAGCTGAAATTGCAAGGTAAATTAAAAAATAAATCATTGCCCAGAAAAAGTTCTGTCATGAAAATCAAGAATCAAATTTTATGAATTGGTTCAATGTTGAATGGTGCAGGCTGAGGGAACTGCACACTCTAAAGGGCCATGTGGAATCAGTGGTGAAGTTGAAGGGGTTGGACATTGAGACTATCCAACAACACTACACTGTTTAACCTGCGATGGAGGAGACAACAATGGGCTGACTATCAACGAAAAAACGAAGAAGGAAATACATTTAAAATGAAAAAAATAGGGGAAAATATGTATATTCTGTTTCTTTTTTCTTCCCTCTTTTGTACTTCCAATTCTTTTTTCTAGGTATTGTGGGGTGGAATGTATTATCAACTGAAGTTCTAAAGTAA ATGCTGAATGGGACTTTGCAAGGATTAAAGGCATTGGTTGGGGATGGGCAGGAGCCATCTGGGTATACAGTATTGTTACTTACTTCCCTCTTGATATTCTCAAATTCACAATCCGATACGCCCTCAGCGGCAAGGCCTGGGACAACGTACTCGACAATAAGGTCTACAGCCTTTACAACCAAGAAGGATTACGGAATAGGCGAAAGAGAAGCACAATGGGCAACAGAACAACGGACGATGCACGGCCTGCAGCCACCAGAAACCATATTTCATGAGAGTAGCAGCCACGAGGATCATTCAGAGATTGCTGAGCAAGCCAAGAAAAGAGCTGAAATTGCAAGGCTGAGGGAACTGCACACTCTAAAGGGCCATGTGGAATCAGTGGTGAAGTTGAAGGGGTTGGACATTGAGACTATCCAACAACACTACACTGTTTAACCTGCGATGGAGGAGACAACAATGGGCTGACTATCAACGAAAAAACGAAGAAGGAAATACATTTAAAATGAAAAAAATAGGGGAAAATATGTATATTCTGTTTCTTTTTTCTTCCCTCTTTTGTACTTCCAATTCTTTTTTCTAGGTATTGTGGGGTGGAATGTATTATCAACTGAAGTTCTAAAGTAA ATGCTGAATGGGACTTTGCAAGGATTAAAGGCATTGGTTGGGGATGGGCAGGAGCCATCTGGGTATACAGTATTGTTACTTACTTCCCTCTTGATATTCTCAAATTCACAATCCGATACGCCCTCAGCGGCAAGGCCTGGGACAACGTACTCGACAATAAGGTCTACAGCCTTTACAACCAAGAAGGATTACGGAATAGGCGAAAGAGAAGCACAATGGGCAACAGAACAACGGACGATGCACGGCCTGCAGCCACCAGAAACCATATTTCATGAGAGTAGCAGCCACGAGGATCATTCAGAGATTGCTGAGCAAGCCAAGAAAAGAGCTGAAATTGCAAGGCTGAGGGAACTGCACACTCTAAAGGGCCATGTGGAATCAGTGGTGAAGTTGAAGGGGTTGGACATTGAGACTATCCAACAACACTACACTGTTTAA MLNGTLQGLKALVGDGQEPSGYTVLLLTSLLIFSNSQSDTPSAARPGTTYSTIRSTAFTTKKDYGIGEREAQWATEQRTMHGLQPPETIFHESSSHEDHSEIAEQAKKRAEIARLRELHTLKGHVESVVKLKGLDIETIQQHYTV Homology
BLAST of CmoCh11G004840 vs. ExPASy Swiss-Prot
Match: Q03194 (Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia OX=4092 GN=PMA4 PE=2 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 3.7e-33 Identity = 74/92 (80.43%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of CmoCh11G004840 vs. ExPASy Swiss-Prot
Match: Q9SH76 (ATPase 6, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=AHA6 PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 8.3e-33 Identity = 68/90 (75.56%), Postives = 82/90 (91.11%), Query Frame = 0
BLAST of CmoCh11G004840 vs. ExPASy Swiss-Prot
Match: Q9M2A0 (ATPase 8, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=AHA8 PE=3 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.8e-32 Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of CmoCh11G004840 vs. ExPASy Swiss-Prot
Match: Q7XPY2 (Plasma membrane ATPase OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0656100 PE=2 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 4.1e-32 Identity = 73/93 (78.49%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of CmoCh11G004840 vs. ExPASy Swiss-Prot
Match: P20649 (ATPase 1, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=AHA1 PE=1 SV=3) HSP 1 Score: 136.3 bits (342), Expect = 2.7e-31 Identity = 72/92 (78.26%), Postives = 77/92 (83.70%), Query Frame = 0
BLAST of CmoCh11G004840 vs. ExPASy TrEMBL
Match: A0A6J1C279 (Plasma membrane ATPase OS=Momordica charantia OX=3673 GN=LOC111007272 PE=3 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 4.0e-38 Identity = 84/90 (93.33%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of CmoCh11G004840 vs. ExPASy TrEMBL
Match: A0A0A0LTH0 (Plasma membrane ATPase OS=Cucumis sativus OX=3659 GN=Csa_1G267210 PE=3 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 1.3e-36 Identity = 82/90 (91.11%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of CmoCh11G004840 vs. ExPASy TrEMBL
Match: A0A5A7T0D9 (Plasma membrane ATPase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G001020 PE=3 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36 Identity = 81/90 (90.00%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of CmoCh11G004840 vs. ExPASy TrEMBL
Match: A0A5D3BWZ2 (Plasma membrane ATPase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00570 PE=3 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36 Identity = 81/90 (90.00%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of CmoCh11G004840 vs. ExPASy TrEMBL
Match: A0A1S3B9U9 (Plasma membrane ATPase OS=Cucumis melo OX=3656 GN=LOC103487374 PE=3 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36 Identity = 81/90 (90.00%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of CmoCh11G004840 vs. NCBI nr
Match: KAG6587845.1 (ATPase 8, plasma membrane-type, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 179.5 bits (454), Expect = 2.1e-41 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of CmoCh11G004840 vs. NCBI nr
Match: KAG7035663.1 (ATPase 8, plasma membrane-type [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 179.5 bits (454), Expect = 2.1e-41 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of CmoCh11G004840 vs. NCBI nr
Match: XP_023530964.1 (plasma membrane ATPase 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 179.5 bits (454), Expect = 2.1e-41 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of CmoCh11G004840 vs. NCBI nr
Match: XP_022135267.1 (ATPase 8, plasma membrane-type-like [Momordica charantia]) HSP 1 Score: 167.5 bits (423), Expect = 8.2e-38 Identity = 84/90 (93.33%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of CmoCh11G004840 vs. NCBI nr
Match: XP_004146701.1 (ATPase 8, plasma membrane-type [Cucumis sativus] >KAE8653042.1 hypothetical protein Csa_019868 [Cucumis sativus]) HSP 1 Score: 162.5 bits (410), Expect = 2.7e-36 Identity = 82/90 (91.11%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of CmoCh11G004840 vs. TAIR 10
Match: AT2G07560.1 (H(+)-ATPase 6 ) HSP 1 Score: 141.4 bits (355), Expect = 5.9e-34 Identity = 68/90 (75.56%), Postives = 82/90 (91.11%), Query Frame = 0
BLAST of CmoCh11G004840 vs. TAIR 10
Match: AT3G42640.1 (H(+)-ATPase 8 ) HSP 1 Score: 140.2 bits (352), Expect = 1.3e-33 Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of CmoCh11G004840 vs. TAIR 10
Match: AT2G18960.1 (H(+)-ATPase 1 ) HSP 1 Score: 136.3 bits (342), Expect = 1.9e-32 Identity = 72/92 (78.26%), Postives = 77/92 (83.70%), Query Frame = 0
BLAST of CmoCh11G004840 vs. TAIR 10
Match: AT2G24520.1 (H(+)-ATPase 5 ) HSP 1 Score: 134.0 bits (336), Expect = 9.4e-32 Identity = 69/92 (75.00%), Postives = 80/92 (86.96%), Query Frame = 0
BLAST of CmoCh11G004840 vs. TAIR 10
Match: AT1G80660.1 (H(+)-ATPase 9 ) HSP 1 Score: 132.1 bits (331), Expect = 3.6e-31 Identity = 67/92 (72.83%), Postives = 80/92 (86.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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