CmoCh11G004710 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G004710
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Replication termination factor 2
Location	Cmo_Chr11: 2307508 .. 2308668 (+)
RNA-Seq Expression	CmoCh11G004710
Synteny	CmoCh11G004710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCCGAAAAATCAACACCGTCTTCAGTTCTTCGTCCATTCTCCCGACCTCCAAATTCAATCCAAAATCGTAAACCTAGCACAAACATCGGCCCAATCCCTCGCGGATCTTAAGTTATCTCTTATCCTCAACACGCCTGCTTCACGGTTAGCCTCATCTTTCTACTTCACCCTAAATGGGAAACCTCTCCTCGATTCCGCCACAATTTCCAGTTCTCTAGTTCCCCCTCTGTCCACCTTGATTTTAAGAACCAGGGTCCTTGGGGGCGGTGGTGATGGCGGTGCAACCGGGGCCGAATCCCGTGACTGCTACCTTAAAATGTACGCAGAGAAGAAACCCGATAAGGTCGATCCTAACGAGCAGAGGCTATCCAAGTGGTTGAACTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGAAATATCTTCAACAAGGAGCCGCTGGTTCACGCGTTGCTGGAGAAGAAGCTGCCAAAAGGTTTCGGACATATCAAGGGTTTGAAGGATATGATCAAGATAAATCTTTCGATGGTTCCCGGTACAGAATCGCGTGGCAATGCGATCTCAGAGGCGAGGTTTCAATGCCCGATTACTGGGCTCGAGTTCAATGGTAAGTACAAATTTTTTGCTCTGAGAACTTGTGGACACGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTATGGACAGAGACAAGTTTGTGATCAATGGGAGCGAGGAGGAGGTAGTAAGAATGAGGGAGAGGATGGAGGAAGAGAAAACGAAATCAAAGGAGAAGAAGACGAAGAAGGTGAGGACTGGGGAAGTGGGTATGAATGGAGATGTGAGTGTGGATTTGGCATCATCCCGTTTGTCTGGTAAAAAGCATGGCATTGAAGGTAAGGCACTGGGTAAGGTTTCAGCCAAGCCTGAGAAGCATGAGCGGCCAGATAGTGGAGTTCAGGTAAAGGTTGCGGCAAGTAATGGTGCTGTTAAGCGATTTAAAGCAGCAGACATGGCCCCTGCCAATGCTACCAAAGAAGTCTATGCTTCCATATTCACCTCATCTAGGAAGTCGGATTTTAAGGAGACATATTCTTGTAGGTCTCTTCCACTTGGTCGTAATTGA

mRNA sequence

ATGTATCCGAAAAATCAACACCGTCTTCAGTTCTTCGTCCATTCTCCCGACCTCCAAATTCAATCCAAAATCGTAAACCTAGCACAAACATCGGCCCAATCCCTCGCGGATCTTAAGTTATCTCTTATCCTCAACACGCCTGCTTCACGGTTAGCCTCATCTTTCTACTTCACCCTAAATGGGAAACCTCTCCTCGATTCCGCCACAATTTCCAGTTCTCTAGTTCCCCCTCTGTCCACCTTGATTTTAAGAACCAGGGTCCTTGGGGGCGGTGGTGATGGCGGTGCAACCGGGGCCGAATCCCGTGACTGCTACCTTAAAATGTACGCAGAGAAGAAACCCGATAAGGTCGATCCTAACGAGCAGAGGCTATCCAAGTGGTTGAACTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGAAATATCTTCAACAAGGAGCCGCTGGTTCACGCGTTGCTGGAGAAGAAGCTGCCAAAAGGTTTCGGACATATCAAGGGTTTGAAGGATATGATCAAGATAAATCTTTCGATGGTTCCCGGTACAGAATCGCGTGGCAATGCGATCTCAGAGGCGAGGTTTCAATGCCCGATTACTGGGCTCGAGTTCAATGGTAAGTACAAATTTTTTGCTCTGAGAACTTGTGGACACGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTATGGACAGAGACAAGTTTGTGATCAATGGGAGCGAGGAGGAGGTAGTAAGAATGAGGGAGAGGATGGAGGAAGAGAAAACGAAATCAAAGGAGAAGAAGACGAAGAAGGTGAGGACTGGGGAAGTGGGTATGAATGGAGATGTGAGTGTGGATTTGGCATCATCCCGTTTGTCTGGTAAAAAGCATGGCATTGAAGGTAAGGCACTGGGTAAGGTTTCAGCCAAGCCTGAGAAGCATGAGCGGCCAGATAGTGGAGTTCAGGTAAAGGTTGCGGCAAGTAATGGTGCTGTTAAGCGATTTAAAGCAGCAGACATGGCCCCTGCCAATGCTACCAAAGAAGTCTATGCTTCCATATTCACCTCATCTAGGAAGTCGGATTTTAAGGAGACATATTCTTGTAGGTCTCTTCCACTTGGTCGTAATTGA

Coding sequence (CDS)

ATGTATCCGAAAAATCAACACCGTCTTCAGTTCTTCGTCCATTCTCCCGACCTCCAAATTCAATCCAAAATCGTAAACCTAGCACAAACATCGGCCCAATCCCTCGCGGATCTTAAGTTATCTCTTATCCTCAACACGCCTGCTTCACGGTTAGCCTCATCTTTCTACTTCACCCTAAATGGGAAACCTCTCCTCGATTCCGCCACAATTTCCAGTTCTCTAGTTCCCCCTCTGTCCACCTTGATTTTAAGAACCAGGGTCCTTGGGGGCGGTGGTGATGGCGGTGCAACCGGGGCCGAATCCCGTGACTGCTACCTTAAAATGTACGCAGAGAAGAAACCCGATAAGGTCGATCCTAACGAGCAGAGGCTATCCAAGTGGTTGAACTGCGCTCTTTCTAACGAGCCTTTGAGGGAACCTTGTGTGATCGATTGGCTTGGAAATATCTTCAACAAGGAGCCGCTGGTTCACGCGTTGCTGGAGAAGAAGCTGCCAAAAGGTTTCGGACATATCAAGGGTTTGAAGGATATGATCAAGATAAATCTTTCGATGGTTCCCGGTACAGAATCGCGTGGCAATGCGATCTCAGAGGCGAGGTTTCAATGCCCGATTACTGGGCTCGAGTTCAATGGTAAGTACAAATTTTTTGCTCTGAGAACTTGTGGACACGTGCTGAGTGCAAAGGCCTTGAAGGAGGTTAAATCTTCTTCCTGCCTTGTTTGTCATGCTGAGTTTATGGACAGAGACAAGTTTGTGATCAATGGGAGCGAGGAGGAGGTAGTAAGAATGAGGGAGAGGATGGAGGAAGAGAAAACGAAATCAAAGGAGAAGAAGACGAAGAAGGTGAGGACTGGGGAAGTGGGTATGAATGGAGATGTGAGTGTGGATTTGGCATCATCCCGTTTGTCTGGTAAAAAGCATGGCATTGAAGGTAAGGCACTGGGTAAGGTTTCAGCCAAGCCTGAGAAGCATGAGCGGCCAGATAGTGGAGTTCAGGTAAAGGTTGCGGCAAGTAATGGTGCTGTTAAGCGATTTAAAGCAGCAGACATGGCCCCTGCCAATGCTACCAAAGAAGTCTATGCTTCCATATTCACCTCATCTAGGAAGTCGGATTTTAAGGAGACATATTCTTGTAGGTCTCTTCCACTTGGTCGTAATTGA

Protein sequence

MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLNGKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKINLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASSRLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVYASIFTSSRKSDFKETYSCRSLPLGRN

Homology

[Close]

BLAST of CmoCh11G004710 vs. ExPASy Swiss-Prot
Match: Q3T1J8 (Replication termination factor 2 OS=Rattus norvegicus OX=10116 GN=Rtf2 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.6e-33
Identity = 100/271 (36.90%), Postives = 146/271 (53.87%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+ ++  LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEVLRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSMVPGTE-SRGNA-------ISEARFQCPITGLEFNGKYKFFALR 231
             HI+ +K++ ++ LS  P  E  +GN        +  ARF CP+ GLE NG+++F  LR
Sbjct: 79  TSHIRSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSK-EKK 291
            CG V S +ALKE+K+  C  C A F + D  V+NG++E+V  ++ RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKRRMEERRLRAKLEKK 198

Query: 292 TKKVRTGEVGMNGDVSVDLA--SSRLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVA 351
           TKK +T E      +S D A  S   +GK    +     K S+   +    +     KV 
Sbjct: 199 TKKPKTAESASKLGISQDSAGPSKAKAGKSEEADPDPREKKSSLAPRGTASNGSASGKVG 258

Query: 352 ASN-GAVKRFKAADMAPANATKEVYASIFTS 367
               GA+KR   AD    +   E Y SIFTS
Sbjct: 259 KPPCGALKR-SIAD----SEESETYKSIFTS 284

[Close]

BLAST of CmoCh11G004710 vs. ExPASy Swiss-Prot
Match: Q4R594 (Replication termination factor 2 OS=Macaca fascicularis OX=9541 GN=RTF2 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-31
Identity = 80/196 (40.82%), Postives = 116/196 (59.18%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+ ++  LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSMVPGTE-SRGNA-------ISEARFQCPITGLEFNGKYKFFALR 231
             HIK +K++ ++ LS  P  E  +GN        +  ARF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSK-EKK 291
            CG V S +ALKE+K+  C  C A F + D  V+NG+ E+V  ++ RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTNEDVDVLKARMEERRLRAKLEKK 198

Query: 292 TKKVRTGEVGMNGDVS 295
           TKK +  E     DVS
Sbjct: 199 TKKPKAAESVSKPDVS 214

[Close]

BLAST of CmoCh11G004710 vs. ExPASy Swiss-Prot
Match: Q99K95 (Replication termination factor 2 OS=Mus musculus OX=10090 GN=Rtf2 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.4e-31
Identity = 100/272 (36.76%), Postives = 145/272 (53.31%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+ ++  LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSMVPGTE-SRGNA-------ISEARFQCPITGLEFNGKYKFFALR 231
             HI+ +K++ ++ LS  P  E  +GN        +  ARF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIRSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSK-EKK 291
            CG V S +ALKE+K+  C  C A F + D  V+NG++E+V  +++RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKKRMEERRLRAKLEKK 198

Query: 292 TKKVRTG-EVGMNGDVSVDLA--SSRLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKV 351
           TKK +T  E       + D A  S   SGK    +     K S    +    +     KV
Sbjct: 199 TKKPKTATECASKPGTTQDSAGPSKVKSGKPEEADPDPREKKSTPAPRGAATNGSASGKV 258

Query: 352 AASN-GAVKRFKAADMAPANATKEVYASIFTS 367
                GA+KR   AD    +   E Y SIFTS
Sbjct: 259 GKPPCGALKR-SIAD----SEESETYKSIFTS 285

[Close]

BLAST of CmoCh11G004710 vs. ExPASy Swiss-Prot
Match: Q5R9P9 (Replication termination factor 2 OS=Pongo abelii OX=9601 GN=RTF2 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 7.1e-31
Identity = 102/291 (35.05%), Postives = 148/291 (50.86%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+ ++  LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSMVPGTE-SRGNA-------ISEARFQCPITGLEFNGKYKFFALR 231
             HIK +K++ ++ LS  P  E  +GN        +  ARF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSK-EKK 291
            CG V S +ALKE+K+  C  C A F + D  V+NG++E+V  ++ RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRMEERRLRAKLEKK 198

Query: 292 TKKVRTGEVGMNGDVSVDLASSRLSGKKHGIEGKALGKV-SAKPEKHERPDSGVQVKVAA 351
           TKK +  E     DVS               E     KV + KPE+        +  +A 
Sbjct: 199 TKKPKAAESVSKPDVSE--------------EAPGPSKVKTGKPEEASLDSREKKTNLAP 258

Query: 352 SNGAVKRFKA--ADMAPANATK---------EVYASIFT--SSRKSDFKET 376
            + A     +  A   P  ATK         E Y S+FT  SS K   +E+
Sbjct: 259 KSTATNESSSGKAGKPPCGATKRSIADSEESEAYKSLFTTHSSAKRSKEES 295

[Close]

BLAST of CmoCh11G004710 vs. ExPASy Swiss-Prot
Match: Q9BY42 (Replication termination factor 2 OS=Homo sapiens OX=9606 GN=RTF2 PE=1 SV=3)

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-30
Identity = 101/291 (34.71%), Postives = 149/291 (51.20%), Query Frame = 0


Query: 112 KKPDKVDPNEQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFG-- 171
           KK +KVD + + +++W  C LS E LR P V   LG ++NK+ ++  LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 172 --HIKGLKDMIKINLSMVPGTE-SRGNA-------ISEARFQCPITGLEFNGKYKFFALR 231
             HIK +K++ ++ LS  P  E  +GN        +  ARF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 232 TCGHVLSAKALKEVKSSSCLVCHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSK-EKK 291
            CG V S +ALKE+K+  C  C A F + D  ++NG++E+V  ++ RMEE + ++K EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIMLNGTKEDVDVLKTRMEERRLRAKLEKK 198

Query: 292 TKKVRTGEVGMNGDVSVDLASSRLSGKKHGIEGKALGKV-SAKPEKHERPDSGVQVKVAA 351
           TKK +  E     DVS               E     KV + KPE+        +  +A 
Sbjct: 199 TKKPKAAESVSKPDVSE--------------EAPGPSKVKTGKPEEASLDSREKKTNLAP 258

Query: 352 SNGAVKRFKA--ADMAPANATK---------EVYASIFT--SSRKSDFKET 376
            + A+    +  A   P  ATK         E Y S+FT  SS K   +E+
Sbjct: 259 KSTAMNESSSGKAGKPPCGATKRSIADSEESEAYKSLFTTHSSAKRSKEES 295

[Close]

BLAST of CmoCh11G004710 vs. ExPASy TrEMBL
Match: A0A6J1F067 (Replication termination factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111440971 PE=3 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 5.9e-214
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0


Query: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60
           MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN
Sbjct: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300
           CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS
Sbjct: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360
           RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY
Sbjct: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmoCh11G004710 vs. ExPASy TrEMBL
Match: A0A6J1KUM3 (Replication termination factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111498815 PE=3 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 1.5e-209
Identity = 377/386 (97.67%), Postives = 381/386 (98.70%), Query Frame = 0


Query: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60
           MYPKNQHRLQFFV SPDLQIQSKIVNLAQTSAQSLADLKLSL+LN PASRLASSFYFTLN
Sbjct: 1   MYPKNQHRLQFFVRSPDLQIQSKIVNLAQTSAQSLADLKLSLLLNAPASRLASSFYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKE LVHALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           NLSM+PGTESRGN ISEARFQCPITGLEFNGKYKFFALR CGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMIPGTESRGNEISEARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300
           CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTK+KEKKTKKVRTGEVGMNGDVSVDLASS
Sbjct: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKAKEKKTKKVRTGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360
           RLSGKKHGIEGKALGK+SAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY
Sbjct: 301 RLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmoCh11G004710 vs. ExPASy TrEMBL
Match: A0A5A7SWS4 (Replication termination factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00470 PE=3 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 8.9e-186
Identity = 340/388 (87.63%), Postives = 357/388 (92.01%), Query Frame = 0


Query: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60
           M+PKNQHRLQ F+HSPDLQIQSKIV+L QTSA++L DLK SL+  T ASR+ASS YFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPLLDS TI  SL+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGN+FNKE LV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N SM+PGTESRGNAISE RFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEE--KTKSKEKKTKKVRTGEVGMNGDVSVDLA 300
           CH EF +RDKFVINGSEEEV  MRERMEEE  K+KSKEKKTKKVR GEVGMNGDV++DLA
Sbjct: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300

Query: 301 SSRLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKE 360
           +SRLSGKKHGIE + L KVSAKPE+HER D G QVKVAASNGAVKRFKAADM PANATKE
Sbjct: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmoCh11G004710 vs. ExPASy TrEMBL
Match: A0A1S3B9F3 (Replication termination factor 2 OS=Cucumis melo OX=3656 GN=LOC103487489 PE=3 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 8.9e-186
Identity = 340/388 (87.63%), Postives = 357/388 (92.01%), Query Frame = 0


Query: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60
           M+PKNQHRLQ F+HSPDLQIQSKIV+L QTSA++L DLK SL+  T ASR+ASS YFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPLLDS TI  SL+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGN+FNKE LV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N SM+PGTESRGNAISE RFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEE--KTKSKEKKTKKVRTGEVGMNGDVSVDLA 300
           CH EF +RDKFVINGSEEEV  MRERMEEE  K+KSKEKKTKKVR GEVGMNGDV++DLA
Sbjct: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300

Query: 301 SSRLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKE 360
           +SRLSGKKHGIE + L KVSAKPE+HER D G QVKVAASNGAVKRFKAADM PANATKE
Sbjct: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmoCh11G004710 vs. ExPASy TrEMBL
Match: A0A0A0LTI5 (Replication termination factor 2 OS=Cucumis sativus OX=3659 GN=Csa_1G269330 PE=3 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 4.1e-183
Identity = 336/388 (86.60%), Postives = 352/388 (90.72%), Query Frame = 0


Query: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60
           M+PKNQHR Q F+ SPDLQI+SKIVNL QT A++L DLK SL+    ASR+ASSFYFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPLLDS TI  SL+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGN+FNKE LV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N SM+PGTESRGNAISE R+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NFSMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEE--KTKSKEKKTKKVRTGEVGMNGDVSVDLA 300
           CHAEF +RDKFVINGSEEEV  MRERMEEE  K+KSKEKKTKKVR GEVGMNGDVSVDLA
Sbjct: 241 CHAEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLA 300

Query: 301 SSRLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKE 360
            SRLSGKKH IE K+L KVSAKPE+ ER D G QVK A SNGAVKRFKAADM PANATKE
Sbjct: 301 ISRLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmoCh11G004710 vs. NCBI nr
Match: XP_022933589.1 (protein RTF2 homolog [Cucurbita moschata])

HSP 1 Score: 753.1 bits (1943), Expect = 1.2e-213
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0


Query: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60
           MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN
Sbjct: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300
           CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS
Sbjct: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360
           RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY
Sbjct: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmoCh11G004710 vs. NCBI nr
Match: KAG6587836.1 (Replication termination factor 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 748.0 bits (1930), Expect = 3.9e-212
Identity = 383/386 (99.22%), Postives = 384/386 (99.48%), Query Frame = 0


Query: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60
           MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN
Sbjct: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           NLSM+PGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMIPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300
           CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS
Sbjct: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360
           RLSGKKHGIEGKALGKVSAK EKHERPDSGVQVKVAASNG VKRFKAADMAPANATKEVY
Sbjct: 301 RLSGKKHGIEGKALGKVSAKSEKHERPDSGVQVKVAASNGGVKRFKAADMAPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmoCh11G004710 vs. NCBI nr
Match: KAG7035670.1 (Protein RTF2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 747.7 bits (1929), Expect = 5.1e-212
Identity = 382/386 (98.96%), Postives = 384/386 (99.48%), Query Frame = 0


Query: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60
           MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN
Sbjct: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGH+KGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHVKGLKDMIKI 180

Query: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           NLSM+PGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMIPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300
           CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS
Sbjct: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360
           RLSGKKHGIEGKALGKVSAK EKHERPDSGVQVKVAASNG VKRFKAADMAPANATKEVY
Sbjct: 301 RLSGKKHGIEGKALGKVSAKSEKHERPDSGVQVKVAASNGGVKRFKAADMAPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmoCh11G004710 vs. NCBI nr
Match: XP_023005959.1 (protein RTF2 homolog isoform X1 [Cucurbita maxima] >XP_023005964.1 protein RTF2 homolog isoform X2 [Cucurbita maxima] >XP_023005967.1 protein RTF2 homolog isoform X3 [Cucurbita maxima])

HSP 1 Score: 738.4 bits (1905), Expect = 3.1e-209
Identity = 377/386 (97.67%), Postives = 381/386 (98.70%), Query Frame = 0


Query: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60
           MYPKNQHRLQFFV SPDLQIQSKIVNLAQTSAQSLADLKLSL+LN PASRLASSFYFTLN
Sbjct: 1   MYPKNQHRLQFFVRSPDLQIQSKIVNLAQTSAQSLADLKLSLLLNAPASRLASSFYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKE LVHALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           NLSM+PGTESRGN ISEARFQCPITGLEFNGKYKFFALR CGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMIPGTESRGNEISEARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300
           CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTK+KEKKTKKVRTGEVGMNGDVSVDLASS
Sbjct: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKAKEKKTKKVRTGEVGMNGDVSVDLASS 300

Query: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360
           RLSGKKHGIEGKALGK+SAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY
Sbjct: 301 RLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmoCh11G004710 vs. NCBI nr
Match: XP_023531451.1 (protein RTF2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 734.9 bits (1896), Expect = 3.4e-208
Identity = 376/386 (97.41%), Postives = 379/386 (98.19%), Query Frame = 0


Query: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60
           MYPKNQHRLQFFVHSPDLQIQS IVNLAQTSAQSLADLKLSL+L TPASRLASSFYFTLN
Sbjct: 1   MYPKNQHRLQFFVHSPDLQIQSTIVNLAQTSAQSLADLKLSLLLKTPASRLASSFYFTLN 60

Query: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120
           GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNC+LSNEPLREPCVIDWLGNIFNKE LVHALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCSLSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           NLSM+PGTESRGNAISEARFQCPITGLE NGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMIPGTESRGNAISEARFQCPITGLESNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLASS 300
           CH EFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLA S
Sbjct: 241 CHTEFMDRDKFVINGSEEEVVRMRERMEEEKTKSKEKKTKKVRTGEVGMNGDVSVDLAPS 300

Query: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKEVY 360
           RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNG VKRFKAADMAPANATKEVY
Sbjct: 301 RLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGGVKRFKAADMAPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of CmoCh11G004710 vs. TAIR 10
Match: AT5G58020.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). )

HSP 1 Score: 390.2 bits (1001), Expect = 1.9e-108
Identity = 227/384 (59.11%), Postives = 260/384 (67.71%), Query Frame = 0


Query: 8   RLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLA-SSFYFTLNGKPLLD 67
           R Q FV SPD Q   K+V L    AQSL  L     L   + R++ S+   TL+GK L  
Sbjct: 4   RRQIFVKSPDCQ---KVVALQLDPAQSLLTLSGITSLLESSQRISFSACSITLDGKLLNG 63

Query: 68  SATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPNEQRLSK 127
           S  I  S +P +S L L  R+ GGGGDGGATGAESRDCYL MYAEKKPDKVDPNEQRLSK
Sbjct: 64  STRIQVSKLPSVSMLTLFPRLRGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSK 123

Query: 128 WLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKINLSMVP 187
           WLNCALSNEPL EPCVID LGN+FNKE LVHALL K+LPK F +IKGLKDM+ I L+ V 
Sbjct: 124 WLNCALSNEPLAEPCVIDLLGNLFNKEVLVHALLSKRLPKQFSYIKGLKDMVNIKLTPVA 183

Query: 188 GTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHAEFM 247
           G++      + A+FQCP++GLEFNGKYKFFALR CGHV+SAKALKEVKSSSCLVCHA+  
Sbjct: 184 GSDGSSQDTTSAQFQCPVSGLEFNGKYKFFALRGCGHVMSAKALKEVKSSSCLVCHADVK 243

Query: 248 DRDKFVINGSEEEVVRMRERMEEEKTKSKEKK--TKKVRTGEVGMNGDVSVDLASSRLSG 307
           D DK VING+EEEV  +RERMEEEK K +EKK  +KK + G                   
Sbjct: 244 DSDKIVINGTEEEVDLLRERMEEEKAKLREKKGVSKKSKNG------------------- 303

Query: 308 KKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNG-AVKRFKAADMAPANATKEVYASI 367
                    +    AK  K +  D  V       NG  VK+FKAAD  P NATKEVYAS+
Sbjct: 304 ------AAVVADTGAKVAKRQIEDGNVN-----GNGITVKKFKAADKVPVNATKEVYASL 354

Query: 368 FTSS-RKSDFKETYSCRSLPLGRN 387
           FTSS +KSDF+ETYSCRSLPLGRN
Sbjct: 364 FTSSKKKSDFRETYSCRSLPLGRN 354

The following BLAST results are available for this feature:

BLAST of CmoCh11G004710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T1J8	2.6e-33	36.90	Replication termination factor 2 OS=Rattus norvegicus OX=10116 GN=Rtf2 PE=2 SV=1	[more]
Q4R594	1.1e-31	40.82	Replication termination factor 2 OS=Macaca fascicularis OX=9541 GN=RTF2 PE=2 SV=...	[more]
Q99K95	1.4e-31	36.76	Replication termination factor 2 OS=Mus musculus OX=10090 GN=Rtf2 PE=1 SV=1	[more]
Q5R9P9	7.1e-31	35.05	Replication termination factor 2 OS=Pongo abelii OX=9601 GN=RTF2 PE=2 SV=1	[more]
Q9BY42	1.2e-30	34.71	Replication termination factor 2 OS=Homo sapiens OX=9606 GN=RTF2 PE=1 SV=3	[more]

BLAST of CmoCh11G004710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F067	5.9e-214	100.00	Replication termination factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111440971 P...	[more]
A0A6J1KUM3	1.5e-209	97.67	Replication termination factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111498815 PE=...	[more]
A0A5A7SWS4	8.9e-186	87.63	Replication termination factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3B9F3	8.9e-186	87.63	Replication termination factor 2 OS=Cucumis melo OX=3656 GN=LOC103487489 PE=3 SV...	[more]
A0A0A0LTI5	4.1e-183	86.60	Replication termination factor 2 OS=Cucumis sativus OX=3659 GN=Csa_1G269330 PE=3...	[more]

BLAST of CmoCh11G004710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933589.1	1.2e-213	100.00	protein RTF2 homolog [Cucurbita moschata]	[more]
KAG6587836.1	3.9e-212	99.22	Replication termination factor 2, partial [Cucurbita argyrosperma subsp. sororia...	[more]
KAG7035670.1	5.1e-212	98.96	Protein RTF2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023005959.1	3.1e-209	97.67	protein RTF2 homolog isoform X1 [Cucurbita maxima] >XP_023005964.1 protein RTF2 ...	[more]
XP_023531451.1	3.4e-208	97.41	protein RTF2 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh11G004710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58020.1	1.9e-108	59.11	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 253..273
None	No IPR available	PFAM	PF04641	Rtf2	coord: 90..370 e-value: 5.4E-75 score: 252.2
None	No IPR available	PANTHER	PTHR12775:SF1	BNACNNG39770D PROTEIN	coord: 7..301 coord: 332..386
IPR006735	Replication termination factor 2	PANTHER	PTHR12775	PROTEIN C20ORF43 HOMOLOG	coord: 7..301
IPR006735	Replication termination factor 2	PANTHER	PTHR12775	PROTEIN C20ORF43 HOMOLOG	coord: 332..386
IPR027799	Replication termination factor 2, RING-finger	CDD	cd16653	RING-like_Rtf2	coord: 200..245 e-value: 1.01937E-26 score: 98.8523

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G004710.1	CmoCh11G004710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902979	mitotic DNA replication termination
cellular_component	GO:0005634	nucleus