CmoCh11G003940 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCGATTAGCTTGTTGGGTCGGCTGAGGAAGGCAGTGAAGAAGCTGAAACTTATGATGAACTTCAAGGTCCAAAGCTGGCGTTTGGCGGCGATGTTTGGACGAAGTTTGTCGAGAAGCCTCCGCGTCAGCTTCAAGGAAGCGCCGGGATTGAAAGGGTGTAGGGAAGAGGATGTTAGAGAGTTGTGTGGAGAGTCGATTTCGTGGAGAGGGCTTCAAAGAACAAGGAGCTACGCTTCTGAAGACGATGTGGACATGCGTGCGGAGGCTTTCATAGCCAATTTCTATCGCCGGCTTAGGATGGAGCGTCAGGTTTCGCTTCACCTTCAATACTGCCGTGAGAATAGCTTTAAACAGCTTTAGATTGATATCATTGATGATGGAAGATTATGATATCCAATGGCTAAGCCTTTCAATTTTCGCTTATTTTGTATAAAAGATTGTAGTCGACTGTGCCTTTGACAAGTACCAATTCATGACTCCAACCGCATTCTCATGTCATTTTGGTTGGTCCGTGTAGACTTCTTGATCCATCTATCTGGTTTGATATTAAGCGGTGA ATGGCGGCGATTAGCTTGTTGGGTCGGCTGAGGAAGGCAGTGAAGAAGCTGAAACTTATGATGAACTTCAAGGTCCAAAGCTGGCGTTTGGCGGCGATGTTTGGACGAAGTTTGTCGAGAAGCCTCCGCGTCAGCTTCAAGGAAGCGCCGGGATTGAAAGGGTGTAGGGAAGAGGATGTTAGAGAGTTGTGTGGAGAGTCGATTTCGTGGAGAGGGCTTCAAAGAACAAGGAGCTACGCTTCTGAAGACGATGTGGACATGCGTGCGGAGGCTTTCATAGCCAATTTCTATCGCCGGCTTAGGATGGAGCGTCAGCGGTGA ATGGCGGCGATTAGCTTGTTGGGTCGGCTGAGGAAGGCAGTGAAGAAGCTGAAACTTATGATGAACTTCAAGGTCCAAAGCTGGCGTTTGGCGGCGATGTTTGGACGAAGTTTGTCGAGAAGCCTCCGCGTCAGCTTCAAGGAAGCGCCGGGATTGAAAGGGTGTAGGGAAGAGGATGTTAGAGAGTTGTGTGGAGAGTCGATTTCGTGGAGAGGGCTTCAAAGAACAAGGAGCTACGCTTCTGAAGACGATGTGGACATGCGTGCGGAGGCTTTCATAGCCAATTTCTATCGCCGGCTTAGGATGGAGCGTCAGCGGTGA MAAISLLGRLRKAVKKLKLMMNFKVQSWRLAAMFGRSLSRSLRVSFKEAPGLKGCREEDVRELCGESISWRGLQRTRSYASEDDVDMRAEAFIANFYRRLRMERQR Homology
BLAST of CmoCh11G003940 vs. ExPASy TrEMBL
Match: A0A6J1KPV5 (uncharacterized protein LOC111497185 OS=Cucurbita maxima OX=3661 GN=LOC111497185 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 5.9e-47 Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of CmoCh11G003940 vs. ExPASy TrEMBL
Match: A0A5D3CK96 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00610 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.5e-29 Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of CmoCh11G003940 vs. ExPASy TrEMBL
Match: A0A0A0LUK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423060 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.5e-29 Identity = 75/106 (70.75%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of CmoCh11G003940 vs. ExPASy TrEMBL
Match: A0A1S3BWN6 (uncharacterized protein LOC103494271 OS=Cucumis melo OX=3656 GN=LOC103494271 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.5e-29 Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of CmoCh11G003940 vs. ExPASy TrEMBL
Match: A0A6J1E1K7 (uncharacterized protein LOC111429947 OS=Cucurbita moschata OX=3662 GN=LOC111429947 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 7.2e-29 Identity = 74/106 (69.81%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of CmoCh11G003940 vs. NCBI nr
Match: KAG7021729.1 (hypothetical protein SDJN02_15456, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 200.7 bits (509), Expect = 6.4e-48 Identity = 103/105 (98.10%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of CmoCh11G003940 vs. NCBI nr
Match: KAG6587758.1 (hypothetical protein SDJN03_16323, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 197.2 bits (500), Expect = 7.1e-47 Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of CmoCh11G003940 vs. NCBI nr
Match: XP_023003661.1 (uncharacterized protein LOC111497185 [Cucurbita maxima]) HSP 1 Score: 196.4 bits (498), Expect = 1.2e-46 Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of CmoCh11G003940 vs. NCBI nr
Match: XP_023531504.1 (uncharacterized protein LOC111793719 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193.7 bits (491), Expect = 7.9e-46 Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of CmoCh11G003940 vs. NCBI nr
Match: XP_023515447.1 (uncharacterized protein LOC111779603 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 140.2 bits (352), Expect = 1.0e-29 Identity = 74/105 (70.48%), Postives = 86/105 (81.90%), Query Frame = 0
BLAST of CmoCh11G003940 vs. TAIR 10
Match: AT5G57510.1 (unknown protein; Has 27 Blast hits to 27 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 79.3 bits (194), Expect = 2.0e-15 Identity = 53/106 (50.00%), Postives = 71/106 (66.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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