CmoCh11G003680 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G003680
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr11: 1819246 .. 1822799 (+)
RNA-Seq Expression	CmoCh11G003680
Synteny	CmoCh11G003680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAATTCAATCGTGACCGTTCAGTAATTTGGCCTCACTTGTCAATTGAACGTTCCAGATTACGACAAATGTTCGTTCACGATTGGCTTCAGCCTCCTTGTTTGGACTAATTTTGATCGTCCACGTCTGCCTTGACTTCTGGTCAATTACATTAGGTCAAGAATTAAATTATTCAACTATATAAAATTAAGTCTTCATTATATAAAAGCATCCATAAAATAATTTATTTTAAAATATCATAAAATAAAATAAAAGTTAAATATTTTAATTTAAAACGTATAACAAATATTATTTAATGTTTTTAATTCTAAAAAAAAAAAACTCAAATGGGTAATTGCCAAAAAAATAATTAAAAAAATAGAAGAAATGAAATGAAAATAGGCATTTCTAATTTTGAGAAATTAATAAATCAAATTTCTATTTTAATTATCATTATACTCACGGAATAAACACACACCGTCAATATTTTTGGCGCAATTTACGACATTTTAAATTAATTATTTTTTATTTTTTTTTAGATAATTCTATAAAAATACATGTATATATTGCGGATAAATTATTCCGAAAAAGAATTTCTTTATCGAGATTAATCCTCGATTCTGAAAGTTCTTTCGCACACCCAGAGCTTAAAGGTGAGGGAGCTCCTCTTCAATTTATAGCGTTCAAATTTCATCTGGTTTCTTCGCATGGCCCGAATTCTATCTTTATCGCAATCTTTCATCTCCGCCAAGTTGCAATCTGCGCCTTCGAAATTATCGCTGTTGATTCCGTCTTCCTTTGTCCTCGGTCATCGGAACCGATCTACACGTTCCGGCAAGGTCAAGTTTATCGAAATTGACCTCGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGATGACTTTGTACAGAAGATTATCGTTGAGCGATCGACTCCGGATTGGCTTCCGTTTGTTCCCGGTTCCTCATTTTGGGTTCCTCCTCGCCGTAACAAACCACGCAAGGTGGTCGACCTGTTCGATAAATTGGTTGAACCGCTCACCAAAGAGGAGTCTCCTTCCCTTGCTAACGCCCGTGGTTGGCCCTGCTTGGATTTCTTCGCCAAAGGTATATGTGTGTGTATATATATATATTATTCTTTTTGTTTTTGTTCCCCGATCGCGTTGAGTTATTCGATAGATATGTCTTTAGTGGTTGATTAATGTGGGGAGGGATGATTGAAAGCGGTGATTTTTCGGCCTTATTAGTCTTGTCGTTTGTACTACAACTGTAGGTGAACCGACTTAAGATGAATTTGTGTTATTCGCTATTAATTCAGAGTGATAGAATTGCCGTATTTTTTCTGAATTGGAGTGGTAAATCAACCATATTTTTCTATATAAAACACTACTGCGTCGTTGGTGCATATGAATTGGGACGGTACTTCTGATAGCTTTATGTGATTACTTTGGCTGATCTAATTCTTACTGTCTTGACATTTTAGCCGAATCTTAATTCAGAATTATAATCTGCAGTTTACCCCAAAAAATGGTTTGAGTATATGTGAAAAATTTGATGTAATATCTTACTGTCTCAACATTTTAGCTGAATCTTAATTCAGAATTACAATCTGCAGTTGCACTCAGGATGTAAAACATGTGAGGGAATACTGTAAGATATGTTTATGGCTTATATCAACTCGTTACTAGTAACGTGATTTTGTAGTTTCAAGTTATGAAGAACAACTTGAAATCCCAGATGACTGAGAGTAGTGGTTTTGATAAAGATTGCAATTCACCAAGCATCACTAAATTACAGAAAATAAGAAACCCCTGGACATATCCTCTATCCCCCAACTTCTTGAGCTGGTCGAGATATGGGCATATAGTCACAATGATGATTATGTGCATTGACATAGTTATTTGATTTAGCTTTGACCATTTCATGGTTGTTCTGGCCCAATATGCAAAATTTTTGTAGTGAAACTAAGAGAGTTCGATAAGGTGTAGGATAAAGTTCCTTTCTTCTAGCTATCATGCCTTGTGAAAGCAGAAGTATAGATGTTTTATATATATATAAATGCACAGCATTGTTTCTATCATTTTTCAATTTGTGCGATCCTTGCACAGGGCCATGATTATCTTCATATTCTCCTAATTTTTTACCACATGTCCCCGAAGGAACTATGCATTCAGTATTGTTGCGTAACTTACAAATACTGGACATGATTTGAGCTTGAAAATCTCAGCTCTAATTTGTTAAATATAATGATCAGCGTAACGATATGTTCGATTAAATGAATCCATGTCATAGTTTTTACTTTTCAACAGGAGATTCTGTTGGCTACCAGTTTATGATCTTGAATAATAGTATTCCCAGCTTCCCAATCTATAGGTTGAATAAACATATTCCATTTTTTGTAATTGTTTAGTTTGTTAACTTCTTTAAATTTGGCTCCTTTTATCTCGCGCTTTAATTTTTTTCTACTGTCCCCTTGTATTCCTTCATCTTATCCCAATGAATGTTTGATTCTTTGTTAAAAAAAGGTGTTTTCCAGCTACAAGCCTCATGCAATGATTCCAGTGATGAAGTCCAGTAGTTCACAATGAAGCATGCAGAGGGATTTATGCTTATCACCCATTTGGTGATGGGGATAGGAGTCAAAATATTGGCATCCCCGTTTCAGCAGTTAAATTGATTAAAATTTTGTCTTAAAAACTGAGCTTATTTGTATTTTTTTGTTAATTTCTGTACGAAACTGCCTATTTTTTGTACTAATCATATTCATGGAATGATGACATTTTTACATGAATGCAGAGTCCATCTCTGGAGCAACTCGATTAGTTCCGGTAGACAGTGAATTGGAAACTTCAAATGAGTTGGAGTTAGAGATTGAGGTGAAGACGCCAACAAGTACAGATAACTCAAACCAGCCCGAGGATTGAGATAGATGAACCTCATACCTCATCCACCAATGCAGTTGGGTCGGTAAACTCGGCCTTATTAACCAAGTCCAGCTTGTCGAAGTATCTGATATACTAATGTGCAACAGTACTGCTCTTAATTTACATGGTTCATCTGTGTGCGTGTGCAGGGTCATTAGATGGTTGTTGGAGATGCGAGAGACCGAGTAGAGTGGAAAGTGATGGTGACGAGAGGTCGATACCTTACAGATGGTTCTAGTTTGACTGCTGTGGAATTCACTTCCATTTGCTTAGTCCCGACTGCCCTGTCTATTTGAAGCCCACTTTACACTCCCTCCCTAAACTAGTGGTTGTTTATGTTTCGTTGTTTTTGGACTGATTACTTTAGGAGCTCCAAATTCACCAGCTTGTTATTTAAATGAAGTGAATTCTCAGGATCTTGTCGTCCCCTCCCAACTCTATCTATGCACAGACACAATAAGAACTCTTCCTTACGTATGTATAAAGTAACTGATAAAATGTTGTCCATTTCAAGTGCCAGAAGATTAATCTCAGTTCGTAGTTGCAATATCTTCCAGACTGCTTGAAACTTTTGTGCTATTTGTATACGAAGTTCTCTTTATGGGGTTATGCGTAGCAAACATTGATGATT

mRNA sequence

ATGCGTTCAAATTTCATCTGGTTTCTTCGCATGGCCCGAATTCTATCTTTATCGCAATCTTTCATCTCCGCCAAGTTGCAATCTGCGCCTTCGAAATTATCGCTGTTGATTCCGTCTTCCTTTGTCCTCGGTCATCGGAACCGATCTACACGTTCCGGCAAGGTCAAGTTTATCGAAATTGACCTCGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGATGACTTTGTACAGAAGATTATCGTTGAGCGATCGACTCCGGATTGGCTTCCGTTTGTTCCCGGTTCCTCATTTTGGGTTCCTCCTCGCCGTAACAAACCACGCAAGGTGGTCGACCTGTTCGATAAATTGGTTGAACCGCTCACCAAAGAGGAGTCTCCTTCCCTTGCTAACGCCCGTGGTTGGCCCTGCTTGGATTTCTTCGCCAAAGGTGTTTTCCAGCTACAAGCCTCATGCAATGATTCCAGTGATGAAGTCCAGTAGTTCACAATGAAGCATGCAGAGGGATTTATGCTTATCACCCATTTGGTGATGGGGATAGGAGTCAAAATATTGGCATCCCCGTTTCAGCAAGTCCATCTCTGGAGCAACTCGATTAGTTCCGGTAGACAGTGAATTGGAAACTTCAAATGAGTTGGAGTTAGAGATTGAGGTGAAGACGCCAACAAGTACAGATAACTCAAACCAGCCCGAGGATTGAGATAGATGAACCTCATACCTCATCCACCAATGCAGTTGGGGTCATTAGATGGTTGTTGGAGATGCGAGAGACCGAGTAGAGTGGAAAGTGATGGTGACGAGAGGTCGATACCTTACAGATGGTTCTAGTTTGACTGCTGTGGAATTCACTTCCATTTGCTTAGTCCCGACTGCCCTGTCTATTTGAAGCCCACTTTACACTCCCTCCCTAAACTAGTGGTTGTTTATGTTTCGTTGTTTTTGGACTGATTACTTTAGGAGCTCCAAATTCACCAGCTTGTTATTTAAATGAAGTGAATTCTCAGGATCTTGTCGTCCCCTCCCAACTCTATCTATGCACAGACACAATAAGAACTCTTCCTTACGTATGTATAAAGTAACTGATAAAATGTTGTCCATTTCAAGTGCCAGAAGATTAATCTCAGTTCGTAGTTGCAATATCTTCCAGACTGCTTGAAACTTTTGTGCTATTTGTATACGAAGTTCTCTTTATGGGGTTATGCGTAGCAAACATTGATGATT

Coding sequence (CDS)

ATGCGTTCAAATTTCATCTGGTTTCTTCGCATGGCCCGAATTCTATCTTTATCGCAATCTTTCATCTCCGCCAAGTTGCAATCTGCGCCTTCGAAATTATCGCTGTTGATTCCGTCTTCCTTTGTCCTCGGTCATCGGAACCGATCTACACGTTCCGGCAAGGTCAAGTTTATCGAAATTGACCTCGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGATGACTTTGTACAGAAGATTATCGTTGAGCGATCGACTCCGGATTGGCTTCCGTTTGTTCCCGGTTCCTCATTTTGGGTTCCTCCTCGCCGTAACAAACCACGCAAGGTGGTCGACCTGTTCGATAAATTGGTTGAACCGCTCACCAAAGAGGAGTCTCCTTCCCTTGCTAACGCCCGTGGTTGGCCCTGCTTGGATTTCTTCGCCAAAGGTGTTTTCCAGCTACAAGCCTCATGCAATGATTCCAGTGATGAAGTCCAGTAG

Protein sequence

MRSNFIWFLRMARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLDFFAKGVFQLQASCNDSSDEVQ

Homology

[Close]

BLAST of CmoCh11G003680 vs. ExPASy TrEMBL
Match: A0A6J1F2D4 (uncharacterized protein LOC111438888 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438888 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.4e-81
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 70
           MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD
Sbjct: 1   MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 60

Query: 71  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 130
           SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE
Sbjct: 61  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 120

Query: 131 ESPSLANARGWPCLDFFAKGVFQLQASCNDSSDEVQ 167
           ESPSLANARGWPCLDFFAKGVFQLQASCNDSSDEVQ
Sbjct: 121 ESPSLANARGWPCLDFFAKGVFQLQASCNDSSDEVQ 156

[Close]

BLAST of CmoCh11G003680 vs. ExPASy TrEMBL
Match: A0A6J1I9P9 (uncharacterized protein LOC111472830 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472830 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.7e-72
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 70
           MARILSLSQSFISAKLQSAP KLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD
Sbjct: 1   MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 60

Query: 71  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 130
           SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE
Sbjct: 61  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 120

Query: 131 ESPSLANARGWPCLDFFAKGVF 153
           ESPSLANARGWPCLDFFAKGVF
Sbjct: 121 ESPSLANARGWPCLDFFAKGVF 142

[Close]

BLAST of CmoCh11G003680 vs. ExPASy TrEMBL
Match: A0A6J1EWU2 (uncharacterized protein LOC111438888 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438888 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 7.0e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 70
           MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD
Sbjct: 1   MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 60

Query: 71  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 130
           SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE
Sbjct: 61  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 120

Query: 131 ESPSLANARGWPCLDFFAK 150
           ESPSLANARGWPCLDFFAK
Sbjct: 121 ESPSLANARGWPCLDFFAK 139

[Close]

BLAST of CmoCh11G003680 vs. ExPASy TrEMBL
Match: A0A6J1IDD9 (uncharacterized protein LOC111472830 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472830 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.5e-70
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 70
           MARILSLSQSFISAKLQSAP KLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD
Sbjct: 1   MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 60

Query: 71  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 130
           SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE
Sbjct: 61  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 120

Query: 131 ESPSLANARGWPCLDFFAK 150
           ESPSLANARGWPCLDFFAK
Sbjct: 121 ESPSLANARGWPCLDFFAK 139

[Close]

BLAST of CmoCh11G003680 vs. ExPASy TrEMBL
Match: A0A6J1E5F5 (uncharacterized protein LOC111430102 OS=Cucurbita moschata OX=3662 GN=LOC111430102 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.4e-65
Identity = 127/140 (90.71%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 70
           MARILS SQSFIS+K+QSAP KL LLIPSSFVLGHRNRSTRSGK KFIEIDLESSSFGAD
Sbjct: 1   MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGAD 60

Query: 71  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 130
           SEVLAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR KPRKVVDLFDKLVEPL+KE
Sbjct: 61  SEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVEPLSKE 120

Query: 131 ESPSLANARGWPCLDFFAKG 151
            SPSLAN+RGWPCLDFFAKG
Sbjct: 121 VSPSLANSRGWPCLDFFAKG 140

[Close]

BLAST of CmoCh11G003680 vs. NCBI nr
Match: XP_022932500.1 (uncharacterized protein LOC111438888 isoform X2 [Cucurbita moschata])

HSP 1 Score: 310.5 bits (794), Expect = 9.0e-81
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 70
           MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD
Sbjct: 1   MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 60

Query: 71  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 130
           SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE
Sbjct: 61  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 120

Query: 131 ESPSLANARGWPCLDFFAKGVFQLQASCNDSSDEVQ 167
           ESPSLANARGWPCLDFFAKGVFQLQASCNDSSDEVQ
Sbjct: 121 ESPSLANARGWPCLDFFAKGVFQLQASCNDSSDEVQ 156

[Close]

BLAST of CmoCh11G003680 vs. NCBI nr
Match: XP_022974222.1 (uncharacterized protein LOC111472830 isoform X2 [Cucurbita maxima])

HSP 1 Score: 280.8 bits (717), Expect = 7.6e-72
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 70
           MARILSLSQSFISAKLQSAP KLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD
Sbjct: 1   MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 60

Query: 71  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 130
           SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE
Sbjct: 61  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 120

Query: 131 ESPSLANARGWPCLDFFAKGVF 153
           ESPSLANARGWPCLDFFAKGVF
Sbjct: 121 ESPSLANARGWPCLDFFAKGVF 142

[Close]

BLAST of CmoCh11G003680 vs. NCBI nr
Match: XP_023531267.1 (uncharacterized protein LOC111793559 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.5 bits (711), Expect = 3.8e-71
Identity = 140/142 (98.59%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 70
           MARILSLSQSFISAKLQSAP KLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSF AD
Sbjct: 1   MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFAAD 60

Query: 71  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 130
           SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE
Sbjct: 61  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 120

Query: 131 ESPSLANARGWPCLDFFAKGVF 153
           ESPSLANARGWPCLDFFAKGVF
Sbjct: 121 ESPSLANARGWPCLDFFAKGVF 142

[Close]

BLAST of CmoCh11G003680 vs. NCBI nr
Match: XP_022932487.1 (uncharacterized protein LOC111438888 isoform X1 [Cucurbita moschata] >XP_022932493.1 uncharacterized protein LOC111438888 isoform X1 [Cucurbita moschata])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 70
           MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD
Sbjct: 1   MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 60

Query: 71  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 130
           SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE
Sbjct: 61  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 120

Query: 131 ESPSLANARGWPCLDFFAK 150
           ESPSLANARGWPCLDFFAK
Sbjct: 121 ESPSLANARGWPCLDFFAK 139

[Close]

BLAST of CmoCh11G003680 vs. NCBI nr
Match: KAG6587735.1 (hypothetical protein SDJN03_16300, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021702.1 hypothetical protein SDJN02_15429 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274.2 bits (700), Expect = 7.2e-70
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 70
           MARILSLSQSFISAKLQSAP KLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD
Sbjct: 1   MARILSLSQSFISAKLQSAPLKLSLLIPSSFVLGHRNRSTRSGKVKFIEIDLESSSFGAD 60

Query: 71  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 130
           SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE
Sbjct: 61  SEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKE 120

Query: 131 ESPSLANARGWPCLDFFAK 150
           ESPSLANARGWPCLDFFAK
Sbjct: 121 ESPSLANARGWPCLDFFAK 139

[Close]

BLAST of CmoCh11G003680 vs. TAIR 10
Match: AT1G78890.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24
Identity = 64/146 (43.84%), Postives = 87/146 (59.59%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHR----NRSTRSGKVKFI-EIDLESS 70
           MAR LS S S    +  +A    SLL+PSS  +  R    NR + S  +  I EID+ + 
Sbjct: 1   MARSLSPSLSLSRYRFAAA----SLLLPSSQTIFIRSQSSNRRSNSNHLGVIYEIDIAAD 60

Query: 71  SFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVVDLFDKLVE 130
                     + KL+D V +I+V RS PDWLPFVPG+SFWVPP R++   +  L +KL  
Sbjct: 61  PL--------VNKLEDAVHRIMVRRSAPDWLPFVPGASFWVPPPRSQSHGIAKLVEKLAN 120

Query: 131 PLTKEESPSLANARGWPCLDFFAKGV 152
           P++ EES S+++ RGWPC D+F KGV
Sbjct: 121 PISDEESISISSVRGWPCSDYFIKGV 134

[Close]

BLAST of CmoCh11G003680 vs. TAIR 10
Match: AT2G19180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits to 64 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-23
Identity = 46/90 (51.11%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 58  IEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRNKPRKVV 117
           IE++++S +   ++E   ++KL++FV++IIV  STPDWLPF PGSSFWVPP +    K+ 
Sbjct: 45  IELEIDSKN---EAEAAILKKLNEFVRRIIVHNSTPDWLPFAPGSSFWVPPHQITATKIA 104

Query: 118 DLFDKLVEPLTKEESPSLANARGWPCLDFF 148
           +L DK+  PLT+EES SL++  GWPC  FF
Sbjct: 105 NLVDKVTNPLTEEESLSLSSPYGWPCSSFF 131

[Close]

BLAST of CmoCh11G003680 vs. TAIR 10
Match: AT1G16840.4 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 97.8 bits (242), Expect = 8.6e-21
Identity = 60/144 (41.67%), Postives = 84/144 (58.33%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRST-RSGKVKFIEIDLESSSFGA 70
           MAR  S S S    +  +A S    L+PSS ++  R++S+ R G +   EID  ++S   
Sbjct: 1   MARSFSRSLSLSKGRFAAASSS---LLPSSHLVSFRSQSSDRRGDL--YEIDTSAASQSP 60

Query: 71  DSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP--RRNKPRKVVDLFDKLVEPL 130
              +  I+KL+D V +I V R+ PDWLPFVPG+S+WVPP    ++   +  L  KL  PL
Sbjct: 61  SDPL--IQKLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPL 120

Query: 131 TKEESPSLANARGWPCLDFFAKGV 152
           T EES S  ++ GWP  D+F KGV
Sbjct: 121 THEESLSTNSSHGWPSSDYFLKGV 137

[Close]

BLAST of CmoCh11G003680 vs. TAIR 10
Match: AT1G16840.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.8 bits (242), Expect = 8.6e-21
Identity = 60/144 (41.67%), Postives = 84/144 (58.33%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRST-RSGKVKFIEIDLESSSFGA 70
           MAR  S S S    +  +A S    L+PSS ++  R++S+ R G +   EID  ++S   
Sbjct: 1   MARSFSRSLSLSKGRFAAASSS---LLPSSHLVSFRSQSSDRRGDL--YEIDTSAASQSP 60

Query: 71  DSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP--RRNKPRKVVDLFDKLVEPL 130
              +  I+KL+D V +I V R+ PDWLPFVPG+S+WVPP    ++   +  L  KL  PL
Sbjct: 61  SDPL--IQKLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPL 120

Query: 131 TKEESPSLANARGWPCLDFFAKGV 152
           T EES S  ++ GWP  D+F KGV
Sbjct: 121 THEESLSTNSSHGWPSSDYFLKGV 137

[Close]

BLAST of CmoCh11G003680 vs. TAIR 10
Match: AT1G16840.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.8 bits (242), Expect = 8.6e-21
Identity = 60/144 (41.67%), Postives = 84/144 (58.33%), Query Frame = 0


Query: 11  MARILSLSQSFISAKLQSAPSKLSLLIPSSFVLGHRNRST-RSGKVKFIEIDLESSSFGA 70
           MAR  S S S    +  +A S    L+PSS ++  R++S+ R G +   EID  ++S   
Sbjct: 1   MARSFSRSLSLSKGRFAAASSS---LLPSSHLVSFRSQSSDRRGDL--YEIDTSAASQSP 60

Query: 71  DSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP--RRNKPRKVVDLFDKLVEPL 130
              +  I+KL+D V +I V R+ PDWLPFVPG+S+WVPP    ++   +  L  KL  PL
Sbjct: 61  SDPL--IQKLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPL 120

Query: 131 TKEESPSLANARGWPCLDFFAKGV 152
           T EES S  ++ GWP  D+F KGV
Sbjct: 121 THEESLSTNSSHGWPSSDYFLKGV 137

The following BLAST results are available for this feature:

BLAST of CmoCh11G003680 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh11G003680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F2D4	4.4e-81	100.00	uncharacterized protein LOC111438888 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I9P9	3.7e-72	99.30	uncharacterized protein LOC111472830 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EWU2	7.0e-71	100.00	uncharacterized protein LOC111438888 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IDD9	3.5e-70	99.28	uncharacterized protein LOC111472830 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E5F5	4.4e-65	90.71	uncharacterized protein LOC111430102 OS=Cucurbita moschata OX=3662 GN=LOC1114301...	[more]

BLAST of CmoCh11G003680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932500.1	9.0e-81	100.00	uncharacterized protein LOC111438888 isoform X2 [Cucurbita moschata]	[more]
XP_022974222.1	7.6e-72	99.30	uncharacterized protein LOC111472830 isoform X2 [Cucurbita maxima]	[more]
XP_023531267.1	3.8e-71	98.59	uncharacterized protein LOC111793559 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022932487.1	1.4e-70	100.00	uncharacterized protein LOC111438888 isoform X1 [Cucurbita moschata] >XP_0229324...	[more]
KAG6587735.1	7.2e-70	99.28	hypothetical protein SDJN03_16300, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh11G003680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78890.1	1.7e-24	43.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G19180.1	2.4e-23	51.11	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16840.4	8.6e-21	41.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16840.3	8.6e-21	41.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16840.1	8.6e-21	41.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33972:SF21	SUBFAMILY NOT NAMED	coord: 11..154
None	No IPR available	PANTHER	PTHR33972	EXPRESSED PROTEIN	coord: 11..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G003680.1	CmoCh11G003680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane