CmoCh11G003290 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G003290
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc finger CCHC domain-containing protein 7-like isoform X2
Location	Cmo_Chr11: 1606782 .. 1609753 (+)
RNA-Seq Expression	CmoCh11G003290
Synteny	CmoCh11G003290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTAGTAGTATAAACCGATTGTGTGGAAGCCCTAGCGCCACCCCAAAGTTGAAGAAAAAACTGCCAAGTTTGCTGAGTTCTTCTCCTCTCCATTCAATTAGGGCTTCTTACCAGATTGCAGTTTGATTCAGTTTCGTGTTTGGAGGATGGGGAGGAGAGGCAAGCAGAAGAAGTTCAAGTTCGAGGAAGACGAAGACGAACTGAAAGAGAGGGCTTCGAAGACTACCGTTGTGGTGAGCAGTGACGACGAAGAGGCTAATGAAGATTTAAGCCTCAAGATTGTTGAGAAGGCTTTGAGATTGCGCTCCGGAAAGTTGGTCCGCTTTCCCGACCATAATCAGGTTGGTAACCGTGAACAGAGTGGTAATGGAGGTGTTGATGGTGTTGGAGTTGTCGAAGTGTCTTCGTCGCCTTTGGGGGATGCTGACACTGGTGCCGGAACTAGCGGAACCAGCGTCGATGTCATTGCTGCTGCTTCTGAGGCGCGGGAATTGGGGAGTAAGAAGTCGGCGAAGAAGAGGAAGAGGAAAGTTAAGAAGCTGGAAACTGAAGAGCCCCCCGTGAGTATTTTTCTACTTCCGCTTTAGTCTTTTTGAAAGAATCTAGAGGGAGGGAATAAGATATAGAAGGATTGTTTATCTTCTAGGACATTTACACGGCTTAAGAGACGGGTTCTTCAGTTCTGTTGATGACACGACGACTGTGGCGAGAAAGAAATACTTAACTCGGTCTAGGAGGGCTCATTGAACTTAAAACTGTGTACTTGGGGGGAAATTTTGCCTGCTTTTGTGGTTGATGGAAAACAAAATATTTGATAATATTACACGAGTTTCAAAGAACAAACCATCTTAAATTACTATCCAGATATTGTATTTCCTTTCCTCTAATCTGATAGAAAGGATCGTGGGGTTTGGCTATTTCTCATTGTCTTGCTGCTTCCTTTGATTTTAGGTGGTTGTCACAGAAGGAGAGAAAATCGAGACAATTCCATTGATAGATCAAGTTGATTCGGAGGAACCAAAAATTACTGAAATTGAGACAACTCCATTGATAGATCAAGTTGATTCGGAGGCACCAAACATTACTGACACAACTAATAATAACGTGTTTAGGAAACTTCTTGTGAGTCCCTTTATCTTCTCTGAATTACCGTTAAGGAAAATTGATGTTTGTGGAGGCTTAGTTTTGTGTCTCTTACATATTATTCTCCCAGCGTGGACCAAGATACTTTGACCCTCCAGATAGTTGGGGAGCGTGCTATAATTGTGGTGAGGAAGGTCATAATGCTGTCAGTTGCACATCAGCTAAACGGAAGAAACCATGCTTTGTCTGTGGAAGTCTGGAGCACAATGCAAGGAGTTGCTTTAAGGTCAGGAAGATACACAATCTATCTGCATCTTACTTCCCCTCTGTTTTTCTTTTCTTACAGCTGTCCTAGATGCTTCAAACTTTTCATTGGGGGGGGGGGGGGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTAATGAAAATTAGAAATTATACTCTTTATCTAATATCTTTGTTGCTGAGGTAAATTCTTTTAACATTTTTAATGTCTCCATAGTCCTCTGGTCTGAAATCCATATTCCTCATTCTGAGGCTAGAATATGTTTATTGGCTTTCTTATGATCAATCTTTATCCAGTTTATTCACAATCAACCTGAGTGTCTCTCAGTTTTGTAATATTTTCTTCTTCTACGTTCTCCTGTTTCTTTCTCATTTCGATTTCATGAAAATTAAAAACCTGCTCCTTACTATTCGCAGGCACGAGACTGCTATATTTGCAACAAAGTTGGGCATCGTGCAAAAGACTGTCCAGAGAAGCATTTGAAGGTTTCTTCAAGCTCAAAAATATGTTTAAAATGTGGAGATCCTGGGCATGATATGTTTTCTTGCCAAAGTAGTTATCCAGATGATGATCTTAAGGTCCTAATATAGTGTACTTTCTTGGTTCTTTTCCAGAGTTATTTTGCATGCTGTATCATTTTTCTAAACGTGTCTTGTAAAACATTTTTTTTCCAGAACATACAATGCTACATTTGTAAGGAATTAGGTCACTTATGTTGTGTGAATTCCACCAGCGACACTTCAATAGACATTTCCTGCTATAAATGTGGACAGGCTGGACATACTGGTCTGGTAAGTCCTCTATGCAATATGTCATATCTGACTGTACGATGTTCACATGATACTCGTATCACCTTTCATTTTCCATTTAAGACGTTCTCTTGTTTTGTTTACGTATTACTTTTGTGTTATATATATATATATATATAAAAGTTTGTCTTGCTTTTATATGCAATTGCCCATTTGTTTTGCTCTCATGCTGGCTGTCAGTAATAATCAGCAAATCTCGGTGGCAGTTCTGAATTTTTCCGATTTTTGAGCATTGACAAATTTCTAGATTGCTGGACTTATGTATGACTGTATTTTCTTGTGCAAGTCAAATAATTGGGATTAATGAGTTGCTAATGTATGCTTGTAATTAAAGAGTTCATTGTTTAGTGAGTCAACATGTGAGAAAGTAGGAGAGGGGGCCAATATTGGCAGGGTCTATAGTGTTGCTGTCACTTATTATTGTTGTATGTCTCAGTACACGCGAGCAAAGAATATTTAAATACAGGAACTTGTAATCACTTGAACCTTGTTGACAAGAGAGCTGATTCCTTTTAAATTGAAGTTCCTTGCTTCTAAGTTTATTGCACATGGTTGATTAATCTTTTGGGCTGTGTGTATGTGAATCTACAGGCATGCTCGAGATTACGTGGGGAAGCCTCTGCTGCTGTATCAGCCAGCTCATGCTATAGATGTGGTGAAGAAGGGCATTTTGCCCGTGAGTGTACAAGTTCCGCCAAGGTAG

mRNA sequence

TAGTAGTAGTATAAACCGATTGTGTGGAAGCCCTAGCGCCACCCCAAAGTTGAAGAAAAAACTGCCAAGTTTGCTGAGTTCTTCTCCTCTCCATTCAATTAGGGCTTCTTACCAGATTGCAGTTTGATTCAGTTTCGTGTTTGGAGGATGGGGAGGAGAGGCAAGCAGAAGAAGTTCAAGTTCGAGGAAGACGAAGACGAACTGAAAGAGAGGGCTTCGAAGACTACCGTTGTGGTGAGCAGTGACGACGAAGAGGCTAATGAAGATTTAAGCCTCAAGATTGTTGAGAAGGCTTTGAGATTGCGCTCCGGAAAGTTGGTCCGCTTTCCCGACCATAATCAGGTTGGTAACCGTGAACAGAGTGGTAATGGAGGTGTTGATGGTGTTGGAGTTGTCGAAGTGTCTTCGTCGCCTTTGGGGGATGCTGACACTGGTGCCGGAACTAGCGGAACCAGCGTCGATGTCATTGCTGCTGCTTCTGAGGCGCGGGAATTGGGGAGTAAGAAGTCGGCGAAGAAGAGGAAGAGGAAAGTTAAGAAGCTGGAAACTGAAGAGCCCCCCGTGGTTGTCACAGAAGGAGAGAAAATCGAGACAATTCCATTGATAGATCAAGTTGATTCGGAGGAACCAAAAATTACTGAAATTGAGACAACTCCATTGATAGATCAAGTTGATTCGGAGGCACCAAACATTACTGACACAACTAATAATAACGTGTTTAGGAAACTTCTTCGTGGACCAAGATACTTTGACCCTCCAGATAGTTGGGGAGCGTGCTATAATTGTGGTGAGGAAGGTCATAATGCTGTCAGTTGCACATCAGCTAAACGGAAGAAACCATGCTTTGTCTGTGGAAGTCTGGAGCACAATGCAAGGAGTTGCTTTAAGGTCAGGAAGATACACAATCTATCTGCATCTTACTTCCCCTCTAAATTATACTCTTTATCTAATATCTTTGTTGCTGAGTCCTCTGGTCTGAAATCCATATTCCTCATTCTGAGGCTAGAATATGTTTATTGGCTTTCTTATGATCAATCTTTATCCAGTTTATTCACAATCAACCTGAGTGTCTCTCAGTTTTGTAATATTTTCTTCTTCTACGCACGAGACTGCTATATTTGCAACAAAGTTGGGCATCGTGCAAAAGACTGTCCAGAGAAGCATTTGAAGGTTTCTTCAAGCTCAAAAATATGTTTAAAATGTGGAGATCCTGGGCATGATATGTTTTCTTGCCAAAGTAGTTATCCAGATGATGATCTTAAGAGTTATTTTGCATGCTGTATCATTTTTCTAAACGTGTCTTGTAAAACATTTTTTTTCCAGAACATACAATGCTACATTTGTAAGGAATTAGGTCACTTATGTTGTGTGAATTCCACCAGCGACACTTCAATAGACATTTCCTGCTATAAATGTGGACAGGCTGGACATACTGGTCTGGAGAGGGGGCCAATATTGGCAGGGTCTATAGTGTTGCTGTCACTTATTATTGTTGTATGTCTCAGTACACGCGAGCAAAGAATATTTAAATACAGGAACTTGCATGCTCGAGATTACGTGGGGAAGCCTCTGCTGCTGTATCAGCCAGCTCATGCTATAGATGTGGTGAAGAAGGGCATTTTGCCCGTGAGTGTACAAGTTCCGCCAAGGTAG

Coding sequence (CDS)

ATGGGGAGGAGAGGCAAGCAGAAGAAGTTCAAGTTCGAGGAAGACGAAGACGAACTGAAAGAGAGGGCTTCGAAGACTACCGTTGTGGTGAGCAGTGACGACGAAGAGGCTAATGAAGATTTAAGCCTCAAGATTGTTGAGAAGGCTTTGAGATTGCGCTCCGGAAAGTTGGTCCGCTTTCCCGACCATAATCAGGTTGGTAACCGTGAACAGAGTGGTAATGGAGGTGTTGATGGTGTTGGAGTTGTCGAAGTGTCTTCGTCGCCTTTGGGGGATGCTGACACTGGTGCCGGAACTAGCGGAACCAGCGTCGATGTCATTGCTGCTGCTTCTGAGGCGCGGGAATTGGGGAGTAAGAAGTCGGCGAAGAAGAGGAAGAGGAAAGTTAAGAAGCTGGAAACTGAAGAGCCCCCCGTGGTTGTCACAGAAGGAGAGAAAATCGAGACAATTCCATTGATAGATCAAGTTGATTCGGAGGAACCAAAAATTACTGAAATTGAGACAACTCCATTGATAGATCAAGTTGATTCGGAGGCACCAAACATTACTGACACAACTAATAATAACGTGTTTAGGAAACTTCTTCGTGGACCAAGATACTTTGACCCTCCAGATAGTTGGGGAGCGTGCTATAATTGTGGTGAGGAAGGTCATAATGCTGTCAGTTGCACATCAGCTAAACGGAAGAAACCATGCTTTGTCTGTGGAAGTCTGGAGCACAATGCAAGGAGTTGCTTTAAGGTCAGGAAGATACACAATCTATCTGCATCTTACTTCCCCTCTAAATTATACTCTTTATCTAATATCTTTGTTGCTGAGTCCTCTGGTCTGAAATCCATATTCCTCATTCTGAGGCTAGAATATGTTTATTGGCTTTCTTATGATCAATCTTTATCCAGTTTATTCACAATCAACCTGAGTGTCTCTCAGTTTTGTAATATTTTCTTCTTCTACGCACGAGACTGCTATATTTGCAACAAAGTTGGGCATCGTGCAAAAGACTGTCCAGAGAAGCATTTGAAGGTTTCTTCAAGCTCAAAAATATGTTTAAAATGTGGAGATCCTGGGCATGATATGTTTTCTTGCCAAAGTAGTTATCCAGATGATGATCTTAAGAGTTATTTTGCATGCTGTATCATTTTTCTAAACGTGTCTTGTAAAACATTTTTTTTCCAGAACATACAATGCTACATTTGTAAGGAATTAGGTCACTTATGTTGTGTGAATTCCACCAGCGACACTTCAATAGACATTTCCTGCTATAAATGTGGACAGGCTGGACATACTGGTCTGGAGAGGGGGCCAATATTGGCAGGGTCTATAGTGTTGCTGTCACTTATTATTGTTGTATGTCTCAGTACACGCGAGCAAAGAATATTTAAATACAGGAACTTGCATGCTCGAGATTACGTGGGGAAGCCTCTGCTGCTGTATCAGCCAGCTCATGCTATAGATGTGGTGAAGAAGGGCATTTTGCCCGTGAGTGTACAAGTTCCGCCAAGGTAG

Protein sequence

MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRFPDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKKSAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAPNITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEHNARSCFKVRKIHNLSASYFPSKLYSLSNIFVAESSGLKSIFLILRLEYVYWLSYDQSLSSLFTINLSVSQFCNIFFFYARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQSSYPDDDLKSYFACCIIFLNVSCKTFFFQNIQCYICKELGHLCCVNSTSDTSIDISCYKCGQAGHTGLERGPILAGSIVLLSLIIVVCLSTREQRIFKYRNLHARDYVGKPLLLYQPAHAIDVVKKGILPVSVQVPPR

Homology

[Close]

BLAST of CmoCh11G003290 vs. ExPASy Swiss-Prot
Match: P36627 (Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=byr3 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.9e-08
Identity = 49/208 (23.56%), Postives = 81/208 (38.94%), Query Frame = 0


Query: 165 EIETTPLIDQVDSEAPNITDT-TNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSC 224
           E E+ P + Q     P   +   N +  R+  +G            CYNC + GH A  C
Sbjct: 2   ESESVPTVPQTTRPGPRCYNCGENGHQARECTKG----------SICYNCNQTGHKASEC 61

Query: 225 TSAKRKKPCFVCGSLEHNARSCFKVRKIHNLSASYFPSKLYSLSNIFVAESSGLKSIFLI 284
           T  +++K C+ CG+  H  R C         +  Y   ++  ++      ++G       
Sbjct: 62  TEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIAR--DCRTNG------- 121

Query: 285 LRLEYVYWLSYDQSLSSLFTINLSVSQF-CNIFFFYARD------CYICNKVGHRAKDCP 344
                       QS         +++ + C  +   ARD      CY C K+GHR+ +C 
Sbjct: 122 -----------QQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVKCYSCGKIGHRSFECQ 174

Query: 345 EKHLKVSSSSKICLKCGDPGHDMFSCQS 365
           +     +S  ++C KC  PGH   +C S
Sbjct: 182 Q-----ASDGQLCYKCNQPGHIAVNCTS 174

[Close]

BLAST of CmoCh11G003290 vs. ExPASy Swiss-Prot
Match: P53849 (Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GIS2 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 9.3e-07
Identity = 36/130 (27.69%), Postives = 49/130 (37.69%), Query Frame = 0


Query: 322 CYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQSSYPDDDLKSYFAC---- 381
           CY+C K+GH A+DC         S ++C  C  PGH    C +     + K  + C    
Sbjct: 6   CYVCGKIGHLAEDC--------DSERLCYNCNKPGHVQTDC-TMPRTVEFKQCYNCGETG 65

Query: 382 -----CIIFLNVSC--------------KTFFFQNIQCYICKELGHLCCVNSTSDTSIDI 429
                C +    +C              KT  F  + CY C    H+       D    +
Sbjct: 66  HVRSECTVQRCFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISGL 125

[Close]

BLAST of CmoCh11G003290 vs. ExPASy Swiss-Prot
Match: Q8T8R1 (CCHC-type zinc finger protein CG3800 OS=Drosophila melanogaster OX=7227 GN=CG3800 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 5.1e-05
Identity = 32/112 (28.57%), Postives = 48/112 (42.86%), Query Frame = 0


Query: 322 CYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQSS-----YPDDDLKSYFA 381
           CY CN+ GH A+ CPE+       ++ C +C   GH    C  +     Y  +    +  
Sbjct: 57  CYKCNQFGHFARACPEE-------AERCYRCNGIGHISKDCTQADNPTCYRCNKTGHWVR 116

Query: 382 CCIIFLNVSCKTFFFQNIQCYICKELGHLCCVNSTSDTSIDISCYKCGQAGH 429
            C   +N    T    N+ CY C   GH+    S +      +CY CG++GH
Sbjct: 117 NCPEAVNERGPT----NVSCYKCNRTGHI----SKNCPETSKTCYGCGKSGH 153

[Close]

BLAST of CmoCh11G003290 vs. ExPASy TrEMBL
Match: A0A6J1F6E2 (uncharacterized protein LOC111441232 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441232 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 4.0e-178
Identity = 340/431 (78.89%), Postives = 340/431 (78.89%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180
           SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCFKVRKIHNLSASYFPSKLYSLSNIFVAESSGLKSIFLILRLEYVYWLSYDQSLSS 300
           NARSCFK                                                     
Sbjct: 241 NARSCFK----------------------------------------------------- 300

Query: 301 LFTINLSVSQFCNIFFFYARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 360
                             ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF
Sbjct: 301 ------------------ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 340

Query: 361 SCQSSYPDDDLKSYFACCIIFLNVSCKTFFFQNIQCYICKELGHLCCVNSTSDTSIDISC 420
           SCQSSYPDDDLK                    NIQCYICKELGHLCCVNSTSDTSIDISC
Sbjct: 361 SCQSSYPDDDLK--------------------NIQCYICKELGHLCCVNSTSDTSIDISC 340

Query: 421 YKCGQAGHTGL 432
           YKCGQAGHTGL
Sbjct: 421 YKCGQAGHTGL 340

[Close]

BLAST of CmoCh11G003290 vs. ExPASy TrEMBL
Match: A0A6J1F1A8 (uncharacterized protein LOC111441232 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441232 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 4.0e-178
Identity = 340/431 (78.89%), Postives = 340/431 (78.89%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180
           SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCFKVRKIHNLSASYFPSKLYSLSNIFVAESSGLKSIFLILRLEYVYWLSYDQSLSS 300
           NARSCFK                                                     
Sbjct: 241 NARSCFK----------------------------------------------------- 300

Query: 301 LFTINLSVSQFCNIFFFYARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 360
                             ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF
Sbjct: 301 ------------------ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 340

Query: 361 SCQSSYPDDDLKSYFACCIIFLNVSCKTFFFQNIQCYICKELGHLCCVNSTSDTSIDISC 420
           SCQSSYPDDDLK                    NIQCYICKELGHLCCVNSTSDTSIDISC
Sbjct: 361 SCQSSYPDDDLK--------------------NIQCYICKELGHLCCVNSTSDTSIDISC 340

Query: 421 YKCGQAGHTGL 432
           YKCGQAGHTGL
Sbjct: 421 YKCGQAGHTGL 340

[Close]

BLAST of CmoCh11G003290 vs. ExPASy TrEMBL
Match: A0A6J1F6D8 (uncharacterized protein LOC111441232 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111441232 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 4.0e-178
Identity = 340/431 (78.89%), Postives = 340/431 (78.89%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180
           SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCFKVRKIHNLSASYFPSKLYSLSNIFVAESSGLKSIFLILRLEYVYWLSYDQSLSS 300
           NARSCFK                                                     
Sbjct: 241 NARSCFK----------------------------------------------------- 300

Query: 301 LFTINLSVSQFCNIFFFYARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 360
                             ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF
Sbjct: 301 ------------------ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 340

Query: 361 SCQSSYPDDDLKSYFACCIIFLNVSCKTFFFQNIQCYICKELGHLCCVNSTSDTSIDISC 420
           SCQSSYPDDDLK                    NIQCYICKELGHLCCVNSTSDTSIDISC
Sbjct: 361 SCQSSYPDDDLK--------------------NIQCYICKELGHLCCVNSTSDTSIDISC 340

Query: 421 YKCGQAGHTGL 432
           YKCGQAGHTGL
Sbjct: 421 YKCGQAGHTGL 340

[Close]

BLAST of CmoCh11G003290 vs. ExPASy TrEMBL
Match: A0A6J1F1E5 (zinc finger CCHC domain-containing protein 7-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111441232 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 4.0e-178
Identity = 340/431 (78.89%), Postives = 340/431 (78.89%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180
           SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCFKVRKIHNLSASYFPSKLYSLSNIFVAESSGLKSIFLILRLEYVYWLSYDQSLSS 300
           NARSCFK                                                     
Sbjct: 241 NARSCFK----------------------------------------------------- 300

Query: 301 LFTINLSVSQFCNIFFFYARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 360
                             ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF
Sbjct: 301 ------------------ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 340

Query: 361 SCQSSYPDDDLKSYFACCIIFLNVSCKTFFFQNIQCYICKELGHLCCVNSTSDTSIDISC 420
           SCQSSYPDDDLK                    NIQCYICKELGHLCCVNSTSDTSIDISC
Sbjct: 361 SCQSSYPDDDLK--------------------NIQCYICKELGHLCCVNSTSDTSIDISC 340

Query: 421 YKCGQAGHTGL 432
           YKCGQAGHTGL
Sbjct: 421 YKCGQAGHTGL 340

[Close]

BLAST of CmoCh11G003290 vs. ExPASy TrEMBL
Match: A0A6J1F0K3 (zinc finger CCHC domain-containing protein 7-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111441232 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 4.0e-178
Identity = 340/431 (78.89%), Postives = 340/431 (78.89%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180
           SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCFKVRKIHNLSASYFPSKLYSLSNIFVAESSGLKSIFLILRLEYVYWLSYDQSLSS 300
           NARSCFK                                                     
Sbjct: 241 NARSCFK----------------------------------------------------- 300

Query: 301 LFTINLSVSQFCNIFFFYARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 360
                             ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF
Sbjct: 301 ------------------ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 340

Query: 361 SCQSSYPDDDLKSYFACCIIFLNVSCKTFFFQNIQCYICKELGHLCCVNSTSDTSIDISC 420
           SCQSSYPDDDLK                    NIQCYICKELGHLCCVNSTSDTSIDISC
Sbjct: 361 SCQSSYPDDDLK--------------------NIQCYICKELGHLCCVNSTSDTSIDISC 340

Query: 421 YKCGQAGHTGL 432
           YKCGQAGHTGL
Sbjct: 421 YKCGQAGHTGL 340

[Close]

BLAST of CmoCh11G003290 vs. NCBI nr
Match: XP_022933992.1 (zinc finger CCHC domain-containing protein 7-like isoform X5 [Cucurbita moschata])

HSP 1 Score: 634.4 bits (1635), Expect = 8.2e-178
Identity = 340/431 (78.89%), Postives = 340/431 (78.89%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180
           SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCFKVRKIHNLSASYFPSKLYSLSNIFVAESSGLKSIFLILRLEYVYWLSYDQSLSS 300
           NARSCFK                                                     
Sbjct: 241 NARSCFK----------------------------------------------------- 300

Query: 301 LFTINLSVSQFCNIFFFYARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 360
                             ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF
Sbjct: 301 ------------------ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 340

Query: 361 SCQSSYPDDDLKSYFACCIIFLNVSCKTFFFQNIQCYICKELGHLCCVNSTSDTSIDISC 420
           SCQSSYPDDDLK                    NIQCYICKELGHLCCVNSTSDTSIDISC
Sbjct: 361 SCQSSYPDDDLK--------------------NIQCYICKELGHLCCVNSTSDTSIDISC 340

Query: 421 YKCGQAGHTGL 432
           YKCGQAGHTGL
Sbjct: 421 YKCGQAGHTGL 340

[Close]

BLAST of CmoCh11G003290 vs. NCBI nr
Match: XP_022933990.1 (uncharacterized protein LOC111441232 isoform X3 [Cucurbita moschata])

HSP 1 Score: 634.4 bits (1635), Expect = 8.2e-178
Identity = 340/431 (78.89%), Postives = 340/431 (78.89%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180
           SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCFKVRKIHNLSASYFPSKLYSLSNIFVAESSGLKSIFLILRLEYVYWLSYDQSLSS 300
           NARSCFK                                                     
Sbjct: 241 NARSCFK----------------------------------------------------- 300

Query: 301 LFTINLSVSQFCNIFFFYARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 360
                             ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF
Sbjct: 301 ------------------ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 340

Query: 361 SCQSSYPDDDLKSYFACCIIFLNVSCKTFFFQNIQCYICKELGHLCCVNSTSDTSIDISC 420
           SCQSSYPDDDLK                    NIQCYICKELGHLCCVNSTSDTSIDISC
Sbjct: 361 SCQSSYPDDDLK--------------------NIQCYICKELGHLCCVNSTSDTSIDISC 340

Query: 421 YKCGQAGHTGL 432
           YKCGQAGHTGL
Sbjct: 421 YKCGQAGHTGL 340

[Close]

BLAST of CmoCh11G003290 vs. NCBI nr
Match: XP_022933989.1 (uncharacterized protein LOC111441232 isoform X2 [Cucurbita moschata])

HSP 1 Score: 634.4 bits (1635), Expect = 8.2e-178
Identity = 340/431 (78.89%), Postives = 340/431 (78.89%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180
           SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCFKVRKIHNLSASYFPSKLYSLSNIFVAESSGLKSIFLILRLEYVYWLSYDQSLSS 300
           NARSCFK                                                     
Sbjct: 241 NARSCFK----------------------------------------------------- 300

Query: 301 LFTINLSVSQFCNIFFFYARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 360
                             ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF
Sbjct: 301 ------------------ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 340

Query: 361 SCQSSYPDDDLKSYFACCIIFLNVSCKTFFFQNIQCYICKELGHLCCVNSTSDTSIDISC 420
           SCQSSYPDDDLK                    NIQCYICKELGHLCCVNSTSDTSIDISC
Sbjct: 361 SCQSSYPDDDLK--------------------NIQCYICKELGHLCCVNSTSDTSIDISC 340

Query: 421 YKCGQAGHTGL 432
           YKCGQAGHTGL
Sbjct: 421 YKCGQAGHTGL 340

[Close]

BLAST of CmoCh11G003290 vs. NCBI nr
Match: XP_022933987.1 (uncharacterized protein LOC111441232 isoform X1 [Cucurbita moschata] >XP_022933988.1 uncharacterized protein LOC111441232 isoform X1 [Cucurbita moschata])

HSP 1 Score: 634.4 bits (1635), Expect = 8.2e-178
Identity = 340/431 (78.89%), Postives = 340/431 (78.89%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180
           SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCFKVRKIHNLSASYFPSKLYSLSNIFVAESSGLKSIFLILRLEYVYWLSYDQSLSS 300
           NARSCFK                                                     
Sbjct: 241 NARSCFK----------------------------------------------------- 300

Query: 301 LFTINLSVSQFCNIFFFYARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 360
                             ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF
Sbjct: 301 ------------------ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 340

Query: 361 SCQSSYPDDDLKSYFACCIIFLNVSCKTFFFQNIQCYICKELGHLCCVNSTSDTSIDISC 420
           SCQSSYPDDDLK                    NIQCYICKELGHLCCVNSTSDTSIDISC
Sbjct: 361 SCQSSYPDDDLK--------------------NIQCYICKELGHLCCVNSTSDTSIDISC 340

Query: 421 YKCGQAGHTGL 432
           YKCGQAGHTGL
Sbjct: 421 YKCGQAGHTGL 340

[Close]

BLAST of CmoCh11G003290 vs. NCBI nr
Match: XP_022933991.1 (zinc finger CCHC domain-containing protein 7-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 634.4 bits (1635), Expect = 8.2e-178
Identity = 340/431 (78.89%), Postives = 340/431 (78.89%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF
Sbjct: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120
           PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK
Sbjct: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120

Query: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180
           SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP
Sbjct: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240
           NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH
Sbjct: 181 NITDTTNNNVFRKLLRGPRYFDPPDSWGACYNCGEEGHNAVSCTSAKRKKPCFVCGSLEH 240

Query: 241 NARSCFKVRKIHNLSASYFPSKLYSLSNIFVAESSGLKSIFLILRLEYVYWLSYDQSLSS 300
           NARSCFK                                                     
Sbjct: 241 NARSCFK----------------------------------------------------- 300

Query: 301 LFTINLSVSQFCNIFFFYARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 360
                             ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF
Sbjct: 301 ------------------ARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMF 340

Query: 361 SCQSSYPDDDLKSYFACCIIFLNVSCKTFFFQNIQCYICKELGHLCCVNSTSDTSIDISC 420
           SCQSSYPDDDLK                    NIQCYICKELGHLCCVNSTSDTSIDISC
Sbjct: 361 SCQSSYPDDDLK--------------------NIQCYICKELGHLCCVNSTSDTSIDISC 340

Query: 421 YKCGQAGHTGL 432
           YKCGQAGHTGL
Sbjct: 421 YKCGQAGHTGL 340

[Close]

BLAST of CmoCh11G003290 vs. TAIR 10
Match: AT3G43590.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 203.4 bits (516), Expect = 4.4e-52
Identity = 149/440 (33.86%), Postives = 198/440 (45.00%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVV---VSSDDEEANEDLSLKIVEKALRLRSGKL 60
           M R+ K +KF F++ EDE +E     T V      DD+EANEDLSLKI+EKAL  R    
Sbjct: 1   MPRQNKDEKFVFDDGEDEDREDPVAITEVDNGEEEDDDEANEDLSLKILEKALSRR---- 60

Query: 61  VRFPDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELG 120
                   VGN+  S                   D  + +G   T V V    S+     
Sbjct: 61  -------DVGNKLDS-------------------DLSSDSGVVST-VMVNGVKSKV---- 120

Query: 121 SKKSAKKRKRKVKKLETE-EPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVD 180
            KKS   +K K  KLE + E P+V  + ++ + +  I + + E+ ++             
Sbjct: 121 -KKSESSKKMKRNKLEADHEIPIVWNDQDEEKVVEEIVKGEGEDDEVER----------- 180

Query: 181 SEAPNITDTTNNNVFRKLLRGPRYFDPPDS-WGACYNCGEEGHNAVSC-TSAKRKKPCFV 240
           S+ P   +T +N V +KLLRG RYFDPPD+ W +CY+CGE+GH + +C T  KR+KPCF+
Sbjct: 181 SDEPKTEETASNLVLKKLLRGARYFDPPDAGWVSCYSCGEQGHTSFNCPTPTKRRKPCFI 240

Query: 241 CGSLEHNARSCFKVRKIHNLSASYFPSKLYSLSNIFVAESSGLKSIFLILRLEYVYWLSY 300
           CGSLEH A+ C K                                               
Sbjct: 241 CGSLEHGAKQCSK----------------------------------------------- 300

Query: 301 DQSLSSLFTINLSVSQFCNIFFFYARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGD 360
                                     DCYIC K GHRAKDCP+K+ K  S   +CL+CGD
Sbjct: 301 ------------------------GHDCYICKKTGHRAKDCPDKY-KNGSKGAVCLRCGD 301

Query: 361 PGHDMFSCQSSYPDDDLKSYFACCIIFLNVSCKTFFFQNIQCYICKELGHLCCVNSTSDT 420
            GHDM  C+  Y  +DLK                    ++QCYICK  GHLCCV   +  
Sbjct: 361 FGHDMILCKYEYSKEDLK--------------------DVQCYICKSFGHLCCVEPGNSL 301

Query: 421 SIDISCYKCGQAGHTGLERG 435
           S  +SCY+CGQ GH+GL  G
Sbjct: 421 SWAVSCYRCGQLGHSGLACG 301

[Close]

BLAST of CmoCh11G003290 vs. TAIR 10
Match: AT5G36240.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 82.4 bits (202), Expect = 1.1e-15
Identity = 37/89 (41.57%), Postives = 48/89 (53.93%), Query Frame = 0


Query: 346 SKICLKCGDPGHDMFSCQSSYPDDDLKSYFACCIIFLNVSCKTFFFQNIQCYICKELGHL 405
           +++CL+CG  GHDM  C+  Y  +DLK                    NI+CY+C  LGHL
Sbjct: 25  AEVCLRCGGFGHDMTLCKYEYSHEDLK--------------------NIKCYVCNSLGHL 84

Query: 406 CCVNSTSDTSIDISCYKCGQAGHTGLERG 435
           CC+      S  +SCY+CGQ GHTGL  G
Sbjct: 85  CCIEPGHTQSWTVSCYRCGQLGHTGLACG 93

[Close]

BLAST of CmoCh11G003290 vs. TAIR 10
Match: AT3G43490.1 (Zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 81.3 bits (199), Expect = 2.5e-15
Identity = 85/250 (34.00%), Postives = 109/250 (43.60%), Query Frame = 0


Query: 1   MGRRGKQKKFKFEEDEDELKERASKTTVVVSSDDEEANEDLSLKIVEKALRLRSGKLVRF 60
           M  + K   F F++ ED            V+  D+EANEDL LKI+EKA   R+      
Sbjct: 1   MPPKRKDINFLFDDGED-----------TVAIIDDEANEDLRLKILEKAFSRRN------ 60

Query: 61  PDHNQVGNREQSGNGGVDGVGVVEVSSSPLGDADTGAGTSGTSVDVIAAASEARELGSKK 120
                V N+  S           ++S  P           G    V+    ++ E+ + K
Sbjct: 61  -----VDNKLDS-----------DLSFDP-----------GVVSTVMVNGGKSEEVKNSK 120

Query: 121 SAKKRKRKVKKLETEEPPVVVTEGEKIETIPLIDQVDSEEPKITEIETTPLIDQVDSEAP 180
           S KK KR   KLE     V      + E   + D V  EE               D E  
Sbjct: 121 SNKKMKR--NKLEAANEIVTHCVERQDEDNMVEDVVRGEEE--------------DGE-- 180

Query: 181 NITDTTNNNVFRKLLRGPRYFDPPDS-WGACYNCGEEGHNAVSC-TSAKRKKPCFVCGSL 240
               TT+N+V  KLLRG RYFDP D+ W  CY+CGE+ H  VSC T    +K CF+C SL
Sbjct: 181 ----TTSNSVMTKLLRGARYFDPLDAGWVTCYSCGEKDHITVSCPTLTNCRKSCFICASL 184

Query: 241 EHNARSCFKV 249
           EH AR C KV
Sbjct: 241 EHGARQCTKV 184

[Close]

BLAST of CmoCh11G003290 vs. TAIR 10
Match: AT5G52380.1 (VASCULAR-RELATED NAC-DOMAIN 6 )

HSP 1 Score: 53.1 bits (126), Expect = 7.3e-07
Identity = 37/107 (34.58%), Postives = 46/107 (42.99%), Query Frame = 0


Query: 322 CYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQSSYPDDDLKSYFACCIIF 381
           C  C + GH  K+CPEK+   SS  K+C  CGD GH +  C   YP +D  + FA C I 
Sbjct: 101 CLQCRRRGHSLKNCPEKN-NESSEKKLCYNCGDTGHSLSHC--PYPMEDGGTKFASCFI- 160

Query: 382 LNVSCKTFFFQNIQCYICKELGHLCCVNSTSDTSIDISCYKCGQAGH 429
               CK       Q +I K     C  N      +   C  CG   H
Sbjct: 161 ----CKG------QGHISKN----CPENKHGIYPMGGCCKVCGSVAH 189

[Close]

BLAST of CmoCh11G003290 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 )

HSP 1 Score: 44.7 bits (104), Expect = 2.6e-04
Identity = 40/167 (23.95%), Postives = 62/167 (37.13%), Query Frame = 0


Query: 210 CYNCGEEGHNAVSCTSAKR----------KKPCFVCGSLEHNARSCFKVRKIHNLSASYF 269
           CYNCG+ GH A  CTSA               C+ CG + H AR C + + + N      
Sbjct: 134 CYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQ-KSVGN--GDQR 193

Query: 270 PSKLYSLSNIFVAESSGLKSIFLILRLEYVYWLSYDQSLSSLFTIN--LSVSQFCNIFFF 329
            +        +     G  +     ++      S      + ++      +++ C     
Sbjct: 194 GAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQ 253

Query: 330 YARDCYICNKVGHRAKDCPEKHLKVSSSSKICLKCGDPGHDMFSCQS 365
            +R CY C   GH A+DC ++      +   C KCG  GH    C S
Sbjct: 254 PSRGCYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFARECSS 297

The following BLAST results are available for this feature:

BLAST of CmoCh11G003290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P36627	2.9e-08	23.56	Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe (stra...	[more]
P53849	9.3e-07	27.69	Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c...	[more]
Q8T8R1	5.1e-05	28.57	CCHC-type zinc finger protein CG3800 OS=Drosophila melanogaster OX=7227 GN=CG380...	[more]

BLAST of CmoCh11G003290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6E2	4.0e-178	78.89	uncharacterized protein LOC111441232 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1F1A8	4.0e-178	78.89	uncharacterized protein LOC111441232 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1F6D8	4.0e-178	78.89	uncharacterized protein LOC111441232 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1F1E5	4.0e-178	78.89	zinc finger CCHC domain-containing protein 7-like isoform X5 OS=Cucurbita moscha...	[more]
A0A6J1F0K3	4.0e-178	78.89	zinc finger CCHC domain-containing protein 7-like isoform X4 OS=Cucurbita moscha...	[more]

BLAST of CmoCh11G003290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933992.1	8.2e-178	78.89	zinc finger CCHC domain-containing protein 7-like isoform X5 [Cucurbita moschata...	[more]
XP_022933990.1	8.2e-178	78.89	uncharacterized protein LOC111441232 isoform X3 [Cucurbita moschata]	[more]
XP_022933989.1	8.2e-178	78.89	uncharacterized protein LOC111441232 isoform X2 [Cucurbita moschata]	[more]
XP_022933987.1	8.2e-178	78.89	uncharacterized protein LOC111441232 isoform X1 [Cucurbita moschata] >XP_0229339...	[more]
XP_022933991.1	8.2e-178	78.89	zinc finger CCHC domain-containing protein 7-like isoform X4 [Cucurbita moschata...	[more]

BLAST of CmoCh11G003290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G43590.1	4.4e-52	33.86	zinc knuckle (CCHC-type) family protein	[more]
AT5G36240.1	1.1e-15	41.57	zinc knuckle (CCHC-type) family protein	[more]
AT3G43490.1	2.5e-15	34.00	Zinc knuckle (CCHC-type) family protein	[more]
AT5G52380.1	7.3e-07	34.58	VASCULAR-RELATED NAC-DOMAIN 6	[more]
AT4G36020.1	2.6e-04	23.95	cold shock domain protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 209..225 e-value: 0.0019 score: 27.5 coord: 231..247 e-value: 0.37 score: 13.9 coord: 419..434 e-value: 27.0 score: 2.3 coord: 348..364 e-value: 0.29 score: 14.6 coord: 395..408 e-value: 55.0 score: 0.5 coord: 321..337 e-value: 8.3E-5 score: 32.0
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 322..337 e-value: 6.1E-6 score: 26.1 coord: 209..225 e-value: 2.9E-4 score: 20.8
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 322..337 score: 10.246099
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 210..225 score: 9.850513
None	No IPR available	GENE3D	4.10.60.10		coord: 205..256 e-value: 9.3E-11 score: 43.3
None	No IPR available	GENE3D	4.10.60.10		coord: 390..432 e-value: 2.7E-5 score: 25.9
None	No IPR available	GENE3D	4.10.60.10		coord: 319..370 e-value: 3.4E-10 score: 41.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..99
None	No IPR available	PANTHER	PTHR46978	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 320..432
None	No IPR available	PANTHER	PTHR46978:SF1	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 1..250
None	No IPR available	PANTHER	PTHR46978:SF1	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 320..432
None	No IPR available	PANTHER	PTHR46978	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 1..250
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 320..365
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 203..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G003290.1	CmoCh11G003290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding