CmoCh11G002320 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G002320
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionSAM domain-containing protein
LocationCmo_Chr11: 1156101 .. 1156937 (-)
RNA-Seq ExpressionCmoCh11G002320
SyntenyCmoCh11G002320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGTTATGAATGTGATGAACTCGAAGAGACAAAGGCGTCCAAATGTTAGGCTTGGGGAAATTGGGGACATATCTGCAGCTTGGGCCTGTGGGTTTTCTCATAGCAATAGGGGAAAGTTAGTTCATAAGGAGTGGAAGAATGATTTGGACCAAACTATGGGTTATGAAGATCATAACCCCACTGTTTTTGGAGATTTGAATCCATTATCTCCCAAGCTCACAATCTCTCCACAAACTTCAACAGAGTTGCAGCACAATGAAGAGGACACCAATAACCCCAAATCTTCTGAATTGGTTTTGGAATGTCCCATGAAGTTTAGTGATGTGACTAGGAAGTGTAGAGATATGAAGCGTCGGGGGCGTAGCAACAACAGCTACGCCATTCTCGGTGGCAGTTGGAGCTCGAAACATAGCTCCGATGACTTCTCGATGGATGAGAAGGAATGTGAGGGGACAGGTAATTCTGCTAATGGTTTTGGTGACTCCTCTGATCATCAAACACCAACGACTAGCAAAGAGTACGGTATCGACCAACCATCGATGCATCGAGAGCTTAAGTCAAACAACAATGCGCAATTTACCGGTGAGAAAGCTCGGGCGCAAGAAAGAATGAGATTAGAAGATGAGAATACAAATGCTGTTAGTAGATGGTTAGAAGAGGTTGGATTTGGGAAGTATGCTGGTGTGTTCGAGATGCACGAGGTAGACGAGGAGGCTTTGCCGTTGCTGACCATTGAAGATCTCAAAGAGATCGGCGTATTGTCTGTCGGGTCTCGAAGGAAACTGTACAATGCAATCCAACAGTTAAGAGGAGGAGAGGAAGAAGGTGTTTGA

mRNA sequence

ATGTTGGTTATGAATGTGATGAACTCGAAGAGACAAAGGCGTCCAAATGTTAGGCTTGGGGAAATTGGGGACATATCTGCAGCTTGGGCCTGTGGGTTTTCTCATAGCAATAGGGGAAAGTTAGTTCATAAGGAGTGGAAGAATGATTTGGACCAAACTATGGGTTATGAAGATCATAACCCCACTGTTTTTGGAGATTTGAATCCATTATCTCCCAAGCTCACAATCTCTCCACAAACTTCAACAGAGTTGCAGCACAATGAAGAGGACACCAATAACCCCAAATCTTCTGAATTGGTTTTGGAATGTCCCATGAAGTTTAGTGATGTGACTAGGAAGTGTAGAGATATGAAGCGTCGGGGGCGTAGCAACAACAGCTACGCCATTCTCGGTGGCAGTTGGAGCTCGAAACATAGCTCCGATGACTTCTCGATGGATGAGAAGGAATGTGAGGGGACAGGTAATTCTGCTAATGGTTTTGGTGACTCCTCTGATCATCAAACACCAACGACTAGCAAAGAGTACGGTATCGACCAACCATCGATGCATCGAGAGCTTAAGTCAAACAACAATGCGCAATTTACCGGTGAGAAAGCTCGGGCGCAAGAAAGAATGAGATTAGAAGATGAGAATACAAATGCTGTTAGTAGATGGTTAGAAGAGGTTGGATTTGGGAAGTATGCTGGTGTGTTCGAGATGCACGAGGTAGACGAGGAGGCTTTGCCGTTGCTGACCATTGAAGATCTCAAAGAGATCGGCGTATTGTCTGTCGGGTCTCGAAGGAAACTGTACAATGCAATCCAACAGTTAAGAGGAGGAGAGGAAGAAGGTGTTTGA

Coding sequence (CDS)

ATGTTGGTTATGAATGTGATGAACTCGAAGAGACAAAGGCGTCCAAATGTTAGGCTTGGGGAAATTGGGGACATATCTGCAGCTTGGGCCTGTGGGTTTTCTCATAGCAATAGGGGAAAGTTAGTTCATAAGGAGTGGAAGAATGATTTGGACCAAACTATGGGTTATGAAGATCATAACCCCACTGTTTTTGGAGATTTGAATCCATTATCTCCCAAGCTCACAATCTCTCCACAAACTTCAACAGAGTTGCAGCACAATGAAGAGGACACCAATAACCCCAAATCTTCTGAATTGGTTTTGGAATGTCCCATGAAGTTTAGTGATGTGACTAGGAAGTGTAGAGATATGAAGCGTCGGGGGCGTAGCAACAACAGCTACGCCATTCTCGGTGGCAGTTGGAGCTCGAAACATAGCTCCGATGACTTCTCGATGGATGAGAAGGAATGTGAGGGGACAGGTAATTCTGCTAATGGTTTTGGTGACTCCTCTGATCATCAAACACCAACGACTAGCAAAGAGTACGGTATCGACCAACCATCGATGCATCGAGAGCTTAAGTCAAACAACAATGCGCAATTTACCGGTGAGAAAGCTCGGGCGCAAGAAAGAATGAGATTAGAAGATGAGAATACAAATGCTGTTAGTAGATGGTTAGAAGAGGTTGGATTTGGGAAGTATGCTGGTGTGTTCGAGATGCACGAGGTAGACGAGGAGGCTTTGCCGTTGCTGACCATTGAAGATCTCAAAGAGATCGGCGTATTGTCTGTCGGGTCTCGAAGGAAACTGTACAATGCAATCCAACAGTTAAGAGGAGGAGAGGAAGAAGGTGTTTGA

Protein sequence

MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHNPTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRRGRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQPSMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV
Homology
BLAST of CmoCh11G002320 vs. ExPASy Swiss-Prot
Match: Q4ACU6 (SH3 and multiple ankyrin repeat domains protein 3 OS=Mus musculus OX=10090 GN=Shank3 PE=1 SV=3)

HSP 1 Score: 52.4 bits (124), Expect = 9.7e-06
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 0

Query: 215  VSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRG 273
            V  WLE +  G++   FE HE++   LP LT ED  E+GV  VG R  +  A++QL G
Sbjct: 1672 VGDWLESIHLGEHRDRFEDHEIEGAHLPALTKEDFVELGVTRVGHRMNIERALRQLDG 1729

BLAST of CmoCh11G002320 vs. ExPASy Swiss-Prot
Match: Q9JLU4 (SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3)

HSP 1 Score: 52.4 bits (124), Expect = 9.7e-06
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 0

Query: 215  VSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRG 273
            V  WLE +  G++   FE HE++   LP LT ED  E+GV  VG R  +  A++QL G
Sbjct: 1682 VGDWLESIHLGEHRDRFEDHEIEGAHLPALTKEDFVELGVTRVGHRMNIERALRQLDG 1739

BLAST of CmoCh11G002320 vs. ExPASy Swiss-Prot
Match: Q9H694 (Protein bicaudal C homolog 1 OS=Homo sapiens OX=9606 GN=BICC1 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 2.2e-05
Identity = 22/50 (44.00%), Postives = 34/50 (68.00%), Query Frame = 0

Query: 221 EVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVLSVGSRRKLYNAIQQL 271
           ++G GKY  VF+  E+D +    LT +DLKE+G+ + G+RRK+  AI +L
Sbjct: 884 KLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISEL 933

BLAST of CmoCh11G002320 vs. ExPASy Swiss-Prot
Match: Q99MQ1 (Protein bicaudal C homolog 1 OS=Mus musculus OX=10090 GN=Bicc1 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.2e-05
Identity = 22/50 (44.00%), Postives = 34/50 (68.00%), Query Frame = 0

Query: 221 EVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVLSVGSRRKLYNAIQQL 271
           ++G GKY  VF+  E+D +    LT +DLKE+G+ + G+RRK+  AI +L
Sbjct: 886 KLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISEL 935

BLAST of CmoCh11G002320 vs. ExPASy Swiss-Prot
Match: Q9BYB0 (SH3 and multiple ankyrin repeat domains protein 3 OS=Homo sapiens OX=9606 GN=SHANK3 PE=1 SV=3)

HSP 1 Score: 51.2 bits (121), Expect = 2.2e-05
Identity = 24/58 (41.38%), Postives = 34/58 (58.62%), Query Frame = 0

Query: 215  VSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRG 273
            V  WLE +  G++   FE HE++   LP LT +D  E+GV  VG R  +  A++QL G
Sbjct: 1673 VGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNIERALRQLDG 1730

BLAST of CmoCh11G002320 vs. ExPASy TrEMBL
Match: A0A6J1EJA6 (ankyrin repeat and SAM domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111435114 PE=4 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 4.1e-156
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0

Query: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 60
           MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN
Sbjct: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 60

Query: 61  PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR 120
           PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR
Sbjct: 61  PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR 120

Query: 121 GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 180
           GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP
Sbjct: 121 GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 180

Query: 181 SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 240
           SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA
Sbjct: 181 SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 240

Query: 241 LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV 279
           LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV
Sbjct: 241 LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV 278

BLAST of CmoCh11G002320 vs. ExPASy TrEMBL
Match: A0A6J1KPG1 (uncharacterized protein LOC111495319 OS=Cucurbita maxima OX=3661 GN=LOC111495319 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 5.7e-150
Identity = 270/278 (97.12%), Postives = 272/278 (97.84%), Query Frame = 0

Query: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 60
           MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKL HKEW +DLDQTMGYEDHN
Sbjct: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLAHKEWNSDLDQTMGYEDHN 60

Query: 61  PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR 120
           P VFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR
Sbjct: 61  PIVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR 120

Query: 121 GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 180
           GRS NSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP
Sbjct: 121 GRSKNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 180

Query: 181 SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 240
           SMHRELKSNNNAQFT EKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA
Sbjct: 181 SMHRELKSNNNAQFTSEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 240

Query: 241 LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV 279
           LPLLTIEDLKEIGVLSVGSRRKLYNAIQ+LR GEEEGV
Sbjct: 241 LPLLTIEDLKEIGVLSVGSRRKLYNAIQRLR-GEEEGV 277

BLAST of CmoCh11G002320 vs. ExPASy TrEMBL
Match: A0A6J1E0K0 (protein bicaudal C homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111429735 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 6.1e-112
Identity = 220/296 (74.32%), Postives = 246/296 (83.11%), Query Frame = 0

Query: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 60
           M+VM+VM+SKRQRRPNVRLGEIGDISAAWACGFSHS R KL H+EWK+DL QT+G +D N
Sbjct: 1   MMVMDVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTRDKLAHREWKHDLLQTVGDDDDN 60

Query: 61  PTVFGDLNPLSPKLTI-----SPQTSTELQHNEEDTNNPKSSELVLECP-----MKFSDV 120
           P VFGDL P +PKLT+     SPQ STELQ N ++ NNP SS L LECP     +KFSDV
Sbjct: 61  PIVFGDLEPSTPKLTVSELGASPQISTELQQNGDNNNNPNSSALPLECPPTSAGLKFSDV 120

Query: 121 TRKCRDMKRRGRSNN-SYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTP 180
           TRKCR+MKRRGRS N  Y +LGGSWSSKHSSDD SM+EKECEGT NSANG+GD SDHQTP
Sbjct: 121 TRKCRNMKRRGRSRNVGYVVLGGSWSSKHSSDDCSMNEKECEGTRNSANGYGDFSDHQTP 180

Query: 181 TTSK-EYGIDQPSMHRELKSNNNAQFTGEKAR-----AQERMRLEDENTNAVSRWLEEVG 240
           TTSK E GIDQPS  ++ + NN++QFTGEK R      Q++MRL+D++TNAVSRWLEEVG
Sbjct: 181 TTSKEECGIDQPSTRQDRELNNDSQFTGEKGRHKSGIVQDQMRLKDDDTNAVSRWLEEVG 240

Query: 241 FGKYAGVFEMHEVDEEALPLLTIEDLKEIGVLSVGSRRKLYNAIQQLR--GGEEEG 278
           FGKYAGVFEMHEVDEEALPLLTIEDLKEIGV SVGSRRKLYNAIQQLR  GGE EG
Sbjct: 241 FGKYAGVFEMHEVDEEALPLLTIEDLKEIGVFSVGSRRKLYNAIQQLREGGGEGEG 296

BLAST of CmoCh11G002320 vs. ExPASy TrEMBL
Match: A0A5D3BHV6 (SAM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00130 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 5.2e-111
Identity = 225/300 (75.00%), Postives = 244/300 (81.33%), Query Frame = 0

Query: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 60
           MLVMNVM+SKRQRRPNVRLGEIGDISAAWACGFSHS R KL HKEWK++LDQ++  ED N
Sbjct: 1   MLVMNVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTREKLAHKEWKHELDQSVDNED-N 60

Query: 61  PTVFGDLNPLSPKLT-----ISPQTSTELQHNEEDTNNPKSSELVLECP----------- 120
           P VFG+L P SPKLT     +SPQ STELQ NEE+ NNP  SEL LECP           
Sbjct: 61  PIVFGELEPSSPKLTVSELGVSPQISTELQLNEENKNNPNFSELPLECPISTELIDMTKS 120

Query: 121 -MKFSDVTRKCRDMKRRGRSNN-SYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGD 180
            +KFSDVTRKCRD KRRGRS N  YAIL GSWSSKHSSD +S+DEKECEGTGNSANGFGD
Sbjct: 121 RLKFSDVTRKCRDKKRRGRSKNVGYAILPGSWSSKHSSDGYSIDEKECEGTGNSANGFGD 180

Query: 181 SSDHQTPTTSK-EYGIDQPSMHRELKSNNNAQFTGEKARAQE-----RMRLEDENTNAVS 240
           SSDHQTPTTSK E GIDQP+  +E + NN A+FT EKAR +      +MRLED +TN VS
Sbjct: 181 SSDHQTPTTSKEECGIDQPT-RQERELNNAARFTSEKARRKSGNVLVKMRLEDNDTNVVS 240

Query: 241 RWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEE 277
           RWLEEVGFGKYAGVFE+HEVDEEALPLLTIEDLKEIGV SVGSRRKLYNAIQQLRGGEEE
Sbjct: 241 RWLEEVGFGKYAGVFEIHEVDEEALPLLTIEDLKEIGVFSVGSRRKLYNAIQQLRGGEEE 298

BLAST of CmoCh11G002320 vs. ExPASy TrEMBL
Match: A0A5A7US96 (SAM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003230 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.4e-110
Identity = 224/300 (74.67%), Postives = 243/300 (81.00%), Query Frame = 0

Query: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 60
           MLVMNVM+SKRQRRPNVRLGEIGDISAAWACGFSHS R KL  KEWK++LDQ++  ED N
Sbjct: 1   MLVMNVMSSKRQRRPNVRLGEIGDISAAWACGFSHSTREKLAQKEWKHELDQSVDNED-N 60

Query: 61  PTVFGDLNPLSPKLT-----ISPQTSTELQHNEEDTNNPKSSELVLECP----------- 120
           P VFG+L P SPKLT     +SPQ STELQ NEE+ NNP  SEL LECP           
Sbjct: 61  PIVFGELEPSSPKLTVSELGVSPQISTELQLNEENKNNPNFSELPLECPISTELIDMTKS 120

Query: 121 -MKFSDVTRKCRDMKRRGRSNN-SYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGD 180
            +KFSDVTRKCRD KRRGRS N  YAIL GSWSSKHSSD +S+DEKECEGTGNSANGFGD
Sbjct: 121 SLKFSDVTRKCRDKKRRGRSKNVGYAILPGSWSSKHSSDGYSIDEKECEGTGNSANGFGD 180

Query: 181 SSDHQTPTTSK-EYGIDQPSMHRELKSNNNAQFTGEKARAQE-----RMRLEDENTNAVS 240
           SSDHQTPTTSK E GIDQP+  +E + NN A+FT EKAR +      +MRLED +TN VS
Sbjct: 181 SSDHQTPTTSKEECGIDQPT-RQERELNNAARFTSEKARRKSGNVLVKMRLEDNDTNVVS 240

Query: 241 RWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEE 277
           RWLEEVGFGKYAGVFE+HEVDEEALPLLTIEDLKEIGV SVGSRRKLYNAIQQLRGGEEE
Sbjct: 241 RWLEEVGFGKYAGVFEIHEVDEEALPLLTIEDLKEIGVFSVGSRRKLYNAIQQLRGGEEE 298

BLAST of CmoCh11G002320 vs. NCBI nr
Match: XP_022928222.1 (ankyrin repeat and SAM domain-containing protein 3-like [Cucurbita moschata])

HSP 1 Score: 560.5 bits (1443), Expect = 8.4e-156
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0

Query: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 60
           MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN
Sbjct: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 60

Query: 61  PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR 120
           PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR
Sbjct: 61  PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR 120

Query: 121 GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 180
           GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP
Sbjct: 121 GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 180

Query: 181 SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 240
           SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA
Sbjct: 181 SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 240

Query: 241 LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV 279
           LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV
Sbjct: 241 LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV 278

BLAST of CmoCh11G002320 vs. NCBI nr
Match: KAG6587608.1 (hypothetical protein SDJN03_16173, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 560.5 bits (1443), Expect = 8.4e-156
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0

Query: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 60
           MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN
Sbjct: 45  MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 104

Query: 61  PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR 120
           PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR
Sbjct: 105 PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR 164

Query: 121 GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 180
           GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP
Sbjct: 165 GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 224

Query: 181 SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 240
           SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA
Sbjct: 225 SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 284

Query: 241 LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV 279
           LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV
Sbjct: 285 LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV 322

BLAST of CmoCh11G002320 vs. NCBI nr
Match: KAG7021569.1 (hypothetical protein SDJN02_15295, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 558.5 bits (1438), Expect = 3.2e-155
Identity = 276/278 (99.28%), Postives = 278/278 (100.00%), Query Frame = 0

Query: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 60
           MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN
Sbjct: 41  MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 100

Query: 61  PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR 120
           PTVFGDLNPLSPKLT+SPQTSTELQHNEEDTNNPKSSELVL+CPMKFSDVTRKCRDMKRR
Sbjct: 101 PTVFGDLNPLSPKLTVSPQTSTELQHNEEDTNNPKSSELVLKCPMKFSDVTRKCRDMKRR 160

Query: 121 GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 180
           GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP
Sbjct: 161 GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 220

Query: 181 SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 240
           SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA
Sbjct: 221 SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 280

Query: 241 LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV 279
           LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV
Sbjct: 281 LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV 318

BLAST of CmoCh11G002320 vs. NCBI nr
Match: XP_023531625.1 (uncharacterized protein LOC111793808 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 542.0 bits (1395), Expect = 3.1e-150
Identity = 270/278 (97.12%), Postives = 270/278 (97.12%), Query Frame = 0

Query: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 60
           MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKL HKEWKN LDQTMGYEDHN
Sbjct: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLAHKEWKNGLDQTMGYEDHN 60

Query: 61  PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR 120
           P VFGDLNP SPKLTISPQTSTELQHNEEDTNN KSSELVLECPMKFSDVTRKCRDMKRR
Sbjct: 61  PIVFGDLNPFSPKLTISPQTSTELQHNEEDTNNLKSSELVLECPMKFSDVTRKCRDMKRR 120

Query: 121 GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 180
           GRS NSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP
Sbjct: 121 GRSKNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 180

Query: 181 SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 240
           SMHRELKSNNNAQFTGEKARAQER RLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA
Sbjct: 181 SMHRELKSNNNAQFTGEKARAQERTRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 240

Query: 241 LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV 279
           LPLLTIEDLKEIGVLSVGSRRKLYNAIQ LRGGEEEGV
Sbjct: 241 LPLLTIEDLKEIGVLSVGSRRKLYNAIQHLRGGEEEGV 278

BLAST of CmoCh11G002320 vs. NCBI nr
Match: XP_023001068.1 (uncharacterized protein LOC111495319 [Cucurbita maxima])

HSP 1 Score: 540.0 bits (1390), Expect = 1.2e-149
Identity = 270/278 (97.12%), Postives = 272/278 (97.84%), Query Frame = 0

Query: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 60
           MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKL HKEW +DLDQTMGYEDHN
Sbjct: 1   MLVMNVMNSKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLAHKEWNSDLDQTMGYEDHN 60

Query: 61  PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR 120
           P VFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR
Sbjct: 61  PIVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR 120

Query: 121 GRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 180
           GRS NSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP
Sbjct: 121 GRSKNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQP 180

Query: 181 SMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 240
           SMHRELKSNNNAQFT EKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA
Sbjct: 181 SMHRELKSNNNAQFTSEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEA 240

Query: 241 LPLLTIEDLKEIGVLSVGSRRKLYNAIQQLRGGEEEGV 279
           LPLLTIEDLKEIGVLSVGSRRKLYNAIQ+LR GEEEGV
Sbjct: 241 LPLLTIEDLKEIGVLSVGSRRKLYNAIQRLR-GEEEGV 277

BLAST of CmoCh11G002320 vs. TAIR 10
Match: AT3G48800.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-15
Identity = 76/280 (27.14%), Postives = 118/280 (42.14%), Query Frame = 0

Query: 9   SKRQRRPNVRLGEIGDISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHNPTVFGDLN 68
           SKR RRP+VRLGEIG                           DQ      H+        
Sbjct: 35  SKRLRRPSVRLGEIGG--------------------------DQYQQQHHHHAAAAA--- 94

Query: 69  PLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRD------------ 128
               +   S  T T    N +DT+    +  +      + ++     +            
Sbjct: 95  -YDSQGRKSKWTPTTTSGNRKDTSKSSRTRTLTNLSSGYENIGTLDDEREGNVDSFGVGS 154

Query: 129 --MKRRGRSNNSYAILGGSWSSKHSSDDFSMDEKECEGTGNSANGFGDSSDHQTPTTSKE 188
             +K+R  S+ +   +  +W SK    D     ++  G      GF D S   + +  KE
Sbjct: 155 WRVKKRVGSSAAAKRVRSNWVSKVGDGD-----EKISGGEELEGGFRDFSREDSESPIKE 214

Query: 189 YGIDQPS----MHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGV 248
             +D+        R  +SNN++         +    ++      V  WL+E+G G+Y  +
Sbjct: 215 ESLDRDGGGFYGRRRYESNNSS------GNREFESNMDGGGKEGVKIWLQELGLGRYWPM 273

Query: 249 FEMHEVDEEALPLLTIEDLKEIGVLSVGSRRKLYNAIQQL 271
           FE+HEVDEE LPLLT+EDLK++G+ +VGSRRK++ AIQ+L
Sbjct: 275 FEIHEVDEEVLPLLTLEDLKDMGINAVGSRRKMFCAIQKL 273

BLAST of CmoCh11G002320 vs. TAIR 10
Match: AT5G23680.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 72.0 bits (175), Expect = 8.4e-13
Identity = 81/285 (28.42%), Postives = 127/285 (44.56%), Query Frame = 0

Query: 7   MNSKRQRRPNVRLGEIG------DISAAWACGFSHSNRGKLVHKEWKNDLDQTMGYEDHN 66
           + SKR RRP+VRLG+IG       + AA+       +  ++   +W+       G  +  
Sbjct: 38  VGSKRLRRPSVRLGDIGGDQYHQHVVAAY-------DSPQVRRPKWRPSGGGGGGGGNRK 97

Query: 67  PTVFGDLNPLSPKLTISPQTSTELQHNEEDTNNPKSSELVLECPMKFSDVTRKCRDMKRR 126
                + N  S K T S +T T    +     N  + +   E P+      R  + +K  
Sbjct: 98  -----EPNNQSGKTTSSSRTRTMTNLSSGGYENTGTLD---EDPVSIGS-WRVKKWVKSS 157

Query: 127 G--------RSNNSYAILGGSWSSKH-----SSDDFSMDEKECEGTG--NSANGFGDSSD 186
           G         +  S   +  +W++++       + FS +E+E E         GF D S 
Sbjct: 158 GGETAATTTTNTASAKRVRSNWATRNDGVEQGDEKFSGEEEEEEEDEELGGEEGFRDFSR 217

Query: 187 HQTPTTSKEYGIDQPSMHRELKSNNNAQFTGEKARAQERMRLEDENTNAVSRWLEEVGFG 246
             + +  KE         R    N   +  G+        +        V  WL+E+G G
Sbjct: 218 EDSESPMKE---------RRRYENREVELLGD-------WQSGGRGKEGVKIWLQELGLG 277

Query: 247 KYAGVFEMHEVDEEALPLLTIEDLKEIGVLSVGSRRKLYNAIQQL 271
           +Y  +FEMHEVDE+ LPLLT+EDLK++G+ +VGSRRK+Y AIQ+L
Sbjct: 278 RYWPMFEMHEVDEQVLPLLTLEDLKDMGINAVGSRRKMYCAIQKL 290

BLAST of CmoCh11G002320 vs. TAIR 10
Match: AT2G45700.1 (sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.2e-05
Identity = 39/140 (27.86%), Postives = 62/140 (44.29%), Query Frame = 0

Query: 136 SKHSSDDFSM---DEKECEGTGNSANGFGDSSDHQTPTTSKEYGIDQPSMHREL-KSNNN 195
           S+  S +FS+   D  +C       +   +        T  +   +QPS    L K  N 
Sbjct: 161 SEGRSGEFSLGKDDSIQCPLCSMDISSLSEEQRQVHSNTCLDKSYNQPSEQDSLRKCENL 220

Query: 196 AQFTGEKARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKE 255
           +    E      ++     + + V +WL  +G  KY  VF   E+D + L  LT EDL  
Sbjct: 221 SSLIKESIDDPVQLPQLVTDLSPVLKWLRSLGLAKYEDVFIREEIDWDTLQSLTEEDLLS 280

Query: 256 IGVLSVGSRRKLYNAIQQLR 272
           IG+ S+G R+K+ NA+  +R
Sbjct: 281 IGITSLGPRKKIVNALSGVR 300

BLAST of CmoCh11G002320 vs. TAIR 10
Match: AT5G48680.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04
Identity = 23/63 (36.51%), Postives = 40/63 (63.49%), Query Frame = 0

Query: 210 ENTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVLSVGSRRKLYNAIQQ 269
           +N  +V  +LE +G  KY+  F++ EVD +AL  +T +DLK + ++ +G R+K+  A+  
Sbjct: 145 QNDASVDSFLESLGLEKYSTAFQVEEVDMDALRHMTDDDLKAL-LIPMGPRKKILLALGD 204

Query: 270 LRG 273
            RG
Sbjct: 205 NRG 206

BLAST of CmoCh11G002320 vs. TAIR 10
Match: AT3G07170.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 42.0 bits (97), Expect = 9.3e-04
Identity = 22/70 (31.43%), Postives = 42/70 (60.00%), Query Frame = 0

Query: 198 KARAQERMRLEDENTNAVSRWLEEVGFGKYAGVFEMHEVDEEALPLLTIEDLKEIGVLSV 257
           K  +Q   +   +  ++V  +LE +G  KY+  F++ EVD +AL  +T +DLK + ++ +
Sbjct: 131 KTSSQATRKKSQQADSSVDSFLESLGLEKYSTAFQVEEVDMDALMHMTDDDLKAM-LIPM 190

Query: 258 GSRRKLYNAI 268
           G R+K+  A+
Sbjct: 191 GPRKKILLAL 199

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q4ACU69.7e-0643.10SH3 and multiple ankyrin repeat domains protein 3 OS=Mus musculus OX=10090 GN=Sh... [more]
Q9JLU49.7e-0643.10SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 ... [more]
Q9H6942.2e-0544.00Protein bicaudal C homolog 1 OS=Homo sapiens OX=9606 GN=BICC1 PE=1 SV=2[more]
Q99MQ12.2e-0544.00Protein bicaudal C homolog 1 OS=Mus musculus OX=10090 GN=Bicc1 PE=1 SV=1[more]
Q9BYB02.2e-0541.38SH3 and multiple ankyrin repeat domains protein 3 OS=Homo sapiens OX=9606 GN=SHA... [more]
Match NameE-valueIdentityDescription
A0A6J1EJA64.1e-156100.00ankyrin repeat and SAM domain-containing protein 3-like OS=Cucurbita moschata OX... [more]
A0A6J1KPG15.7e-15097.12uncharacterized protein LOC111495319 OS=Cucurbita maxima OX=3661 GN=LOC111495319... [more]
A0A6J1E0K06.1e-11274.32protein bicaudal C homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111429735 ... [more]
A0A5D3BHV65.2e-11175.00SAM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A5A7US964.4e-11074.67SAM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
Match NameE-valueIdentityDescription
XP_022928222.18.4e-156100.00ankyrin repeat and SAM domain-containing protein 3-like [Cucurbita moschata][more]
KAG6587608.18.4e-156100.00hypothetical protein SDJN03_16173, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7021569.13.2e-15599.28hypothetical protein SDJN02_15295, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023531625.13.1e-15097.12uncharacterized protein LOC111793808 [Cucurbita pepo subsp. pepo][more]
XP_023001068.11.2e-14997.12uncharacterized protein LOC111495319 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT3G48800.12.4e-1527.14Sterile alpha motif (SAM) domain-containing protein [more]
AT5G23680.18.4e-1328.42Sterile alpha motif (SAM) domain-containing protein [more]
AT2G45700.12.2e-0527.86sterile alpha motif (SAM) domain-containing protein [more]
AT5G48680.11.4e-0436.51Sterile alpha motif (SAM) domain-containing protein [more]
AT3G07170.19.3e-0431.43Sterile alpha motif (SAM) domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 207..273
e-value: 1.4E-13
score: 61.1
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 212..271
e-value: 3.3E-15
score: 56.3
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 210..273
score: 16.74292
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 202..275
e-value: 2.4E-17
score: 64.7
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 211..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..96
NoneNo IPR availablePANTHERPTHR10627:SF65STERILE ALPHA MOTIF/POINTED DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 1..275
NoneNo IPR availablePANTHERPTHR10627SCP160coord: 1..275
NoneNo IPR availableCDDcd09487SAM_superfamilycoord: 215..268
e-value: 1.64489E-19
score: 78.05

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G002320.1CmoCh11G002320.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding