CmoCh11G001640 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAATCCGCTACTAGGGTTTTAGTTCTTAAGCCTGTCGGTTCCAACTTCAGAGTATAGTTCGAAATGGCGGAAGAGACAATCCCTCAACTCGCAGAAAACGGTCCGGAGGTAACCAACTCCGCCGCCGAAGATATGGAACTTGAAAGCACAGAGCCGAAAGTATCAGGTGGTGATTCTGATGCAAACGAGGCCGCTCCAGTAACGAATGGGGATGCTAATTCCAAGCGTGAGAGGGAGGAAGAAGGCGCCGATGACCATGCCGGAGAGGCGAAAAAGCCGAAGGTGGAGAAGTCGGTTGAAGAGGAAAGGCTTGAGAAGGTGGAAAGAGATGGGAAAGGCGAGGAAGAGCATGGTCCTGTGAGTTTAGGCCCGAAGAGCTTTGGATCATCGGTGGAGTTGTTCGATTACTTCTACAACTTTCTTCACTACTGGCCTGCCAACTTGAACGTGAACCAGGTATAATATTATGGACTTCTTTTATCTGCTATCCTTCTCTGTTTTGTTCATGGAAAGGCTACGAATAGCATTGATAAAACTTTATTTTCTGCTAAATGCTGCTGATTTTGTTCATCATCGTCATTGTTTTAGTGTATAAAAGATACATGTAGCTAAACAATAAAATAAAATTACTAAATGGGGTGGGGAACTGGGATCTCTGTACTCATGAAAGGGTGAGTGGTTCATCAATTTTAGCAGAAGGGTGAATGCTCTACCAAAAATATTTGTTCGTCAATCAATTTAATATGAAGCTTTTACTATTTTTTATCTTTTGTGTCATGAATTACGGTCTTAATTATTGTAGTTGTTTTGTTGGAGAATAAGCTTGTATTCATGGACAAGTTGGAATTTGAGACTTGTTCTTCAATATTCTGATGGAGATTGATGATGGTTGCCTCATAACTTGTAAGAGTTTGAGGTCTTTACTTCTCGGAGATTCGTAATGGGTACAAGAGATCTCTAAATTTCTTGCTTGGTGAATTATCTGAATTGAAAACACTAAGGTCATTTGGATTCTTGTGTCAGATTGATTAG TAATCCGCTACTAGGGTTTTAGTTCTTAAGCCTGTCGGTTCCAACTTCAGAGTATAGTTCGAAATGGCGGAAGAGACAATCCCTCAACTCGCAGAAAACGGTCCGGAGGTAACCAACTCCGCCGCCGAAGATATGGAACTTGAAAGCACAGAGCCGAAAGTATCAGGTGGTGATTCTGATGCAAACGAGGCCGCTCCAGTAACGAATGGGGATGCTAATTCCAAGCGTGAGAGGGAGGAAGAAGGCGCCGATGACCATGCCGGAGAGGCGAAAAAGCCGAAGGTGGAGAAGTCGGTTGAAGAGGAAAGGCTTGAGAAGGTGGAAAGAGATGGGAAAGGCGAGGAAGAGCATGGTCCTGTGAGTTTAGGCCCGAAGAGCTTTGGATCATCGGTGGAGTTGTTCGATTACTTCTACAACTTTCTTCACTACTGGCCTGCCAACTTGAACGTGAACCAGATTGATTAG ATGGCGGAAGAGACAATCCCTCAACTCGCAGAAAACGGTCCGGAGGTAACCAACTCCGCCGCCGAAGATATGGAACTTGAAAGCACAGAGCCGAAAGTATCAGGTGGTGATTCTGATGCAAACGAGGCCGCTCCAGTAACGAATGGGGATGCTAATTCCAAGCGTGAGAGGGAGGAAGAAGGCGCCGATGACCATGCCGGAGAGGCGAAAAAGCCGAAGGTGGAGAAGTCGGTTGAAGAGGAAAGGCTTGAGAAGGTGGAAAGAGATGGGAAAGGCGAGGAAGAGCATGGTCCTGTGAGTTTAGGCCCGAAGAGCTTTGGATCATCGGTGGAGTTGTTCGATTACTTCTACAACTTTCTTCACTACTGGCCTGCCAACTTGAACGTGAACCAGATTGATTAG MAEETIPQLAENGPEVTNSAAEDMELESTEPKVSGGDSDANEAAPVTNGDANSKREREEEGADDHAGEAKKPKVEKSVEEERLEKVERDGKGEEEHGPVSLGPKSFGSSVELFDYFYNFLHYWPANLNVNQID Homology
BLAST of CmoCh11G001640 vs. ExPASy Swiss-Prot
Match: Q8L557 (Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana OX=3702 GN=EMB514 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.2e-11 Identity = 46/119 (38.66%), Postives = 61/119 (51.26%), Query Frame = 0
BLAST of CmoCh11G001640 vs. ExPASy TrEMBL
Match: A0A6J1F569 (protein EMBRYO DEFECTIVE 514-like OS=Cucurbita moschata OX=3662 GN=LOC111440949 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63 Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of CmoCh11G001640 vs. ExPASy TrEMBL
Match: A0A6J1IBL1 (protein EMBRYO DEFECTIVE 514-like OS=Cucurbita maxima OX=3661 GN=LOC111471455 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 6.9e-61 Identity = 127/133 (95.49%), Postives = 130/133 (97.74%), Query Frame = 0
BLAST of CmoCh11G001640 vs. ExPASy TrEMBL
Match: A0A6J1C0K4 (protein EMBRYO DEFECTIVE 514 OS=Momordica charantia OX=3673 GN=LOC111007244 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 3.0e-48 Identity = 108/137 (78.83%), Postives = 120/137 (87.59%), Query Frame = 0
BLAST of CmoCh11G001640 vs. ExPASy TrEMBL
Match: A0A0A0LRN9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009730 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 8.2e-38 Identity = 97/133 (72.93%), Postives = 104/133 (78.20%), Query Frame = 0
BLAST of CmoCh11G001640 vs. ExPASy TrEMBL
Match: A0A6J1E069 (protein EMBRYO DEFECTIVE 514-like OS=Cucurbita moschata OX=3662 GN=LOC111429642 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 3.1e-37 Identity = 95/135 (70.37%), Postives = 107/135 (79.26%), Query Frame = 0
BLAST of CmoCh11G001640 vs. NCBI nr
Match: XP_022933555.1 (protein EMBRYO DEFECTIVE 514-like [Cucurbita moschata]) HSP 1 Score: 251.1 bits (640), Expect = 5.2e-63 Identity = 131/133 (98.50%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of CmoCh11G001640 vs. NCBI nr
Match: KAG7021514.1 (Protein EMBRYO DEFECTIVE [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 249.6 bits (636), Expect = 1.5e-62 Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0
BLAST of CmoCh11G001640 vs. NCBI nr
Match: XP_022972943.1 (protein EMBRYO DEFECTIVE 514-like [Cucurbita maxima]) HSP 1 Score: 243.0 bits (619), Expect = 1.4e-60 Identity = 127/133 (95.49%), Postives = 130/133 (97.74%), Query Frame = 0
BLAST of CmoCh11G001640 vs. NCBI nr
Match: XP_023529405.1 (protein EMBRYO DEFECTIVE 514-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 236.1 bits (601), Expect = 1.7e-58 Identity = 125/133 (93.98%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of CmoCh11G001640 vs. NCBI nr
Match: KAG6587539.1 (Protein EMBRYO DEFECTIVE 514, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 206.5 bits (524), Expect = 1.5e-49 Identity = 106/110 (96.36%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of CmoCh11G001640 vs. TAIR 10
Match: AT5G62440.1 (Protein of unknown function (DUF3223) ) HSP 1 Score: 70.1 bits (170), Expect = 1.5e-12 Identity = 46/119 (38.66%), Postives = 61/119 (51.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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