CmoCh10G012610 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G012610
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	G-patch domain-containing protein
Location	Cmo_Chr10: 12892130 .. 12895881 (-)
RNA-Seq Expression	CmoCh10G012610
Synteny	CmoCh10G012610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGCAGCTTCTGCAGGTGCTCGTTGAAACAAACAACAATCCAATTCCCATCTTGTTGACCTAATTTCTCTCAACTTCAGGTTCTTTCCTCTTCTCATAATTCCATTGCATACTGCTCTACAATTTTCTTCAACGTTCTTTCTATGTCGTCCATGCCATTTGTTTTCTCTAGGGCTGTGGAACTTGATTGCTTTTCTGTTTCTTATTAAATTTGTTACTTTGATTAATTTCCATTTTCTGCTTCAGGAAAATTGTTACTTCTGATTCCTCCTTCATGGTAGTTGCAATTTTACTTCCGTCGGTCTATTCTATCGTGTTTATGATCGTGGATATGTACATCTCATTGTAGTCGACTAATCTTAAAGAGAATTTCTTGTGTAAGAATTGGACGGGGAACATGTTTTTTTGTATCTTATTCTTAGTAGTTGAAGCTCTTTCTTGTAGTTACTTAGAATTGGCTAGTTTTTTTTTTTTTTTCCTAAGATCCGCTCGTTTTGGATTGATTTTGTGTGTGACCGCTGTAGATTCGCTCATTTTCTCTATGAAATTATGGTCTCAGTTAGAGGAAAATAGGGATATTAGGGATCCACTGGGAATAGGATGACCAGACTGCCTAAGGACCTCCAACATTACAACCCTTCTTTCGTAGGTTATTTTCTTGAAAAAAAAAAAAAACCTTCAAAGCTTCAAGTTTATTTAGCGAAGCTCAGAAGTATACTGAATGTTAACTATAATCAACCTCACAGTGAAATATGACAAACATTTTAGTCAACTGCTAAACATTATGCTTGCTTGAGATTATTTTCTATGTATATGTTTTACTTGCAACTTGCAAGTGCTAAAATTTTGGTTTCCAGGAATAACACAACCATGGGTTGTCCATTTGGCCATTTGGTCAACTCATGATGAATATTTTGAAATGCATTTATAAAATTGATCAGTTTTTTCATCTTTACAGTTTTTTCATTTAATCATTTTCTTTTTCATTTTTGAACTTTCTAACTTATTATTCTTGTGCTTCAAATTTCTATTTGTAATGTTTTTTAACCTAACCATGTGATATAGGTTGGACAAAATGGATAAACGGAGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGCCTATGCAAAGGAGCAGGTATGAATGAGTTATCATGTCAAACTGGAAATACTCAACATACGTCTGTCTGACCCCTTGACTGACTGAAATCCTCTCCCTTTTCTTACAAAAAAGAACATGAATTACGGTTTTTGTGATATCTAATGTTTCACATATTTTTGTCTTCGGTGGGAATATTAGGATTCTCTTGGTGATGACTTCATAGATGATTTTCGCTTGCCCATCAACCATAGACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCGTTGGACACTCAATTAACTTCATCAAATGTGGGCTATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGAAAGGACGAGCAAGGTATTGTGTTTTTCTGGACATGAAATCCCACTCTGCTTATTCATTGTGCAATCTGTCTCTGATTTTATTATTTCATTATCTTTTCTCGTGAACCTTAGATTCTCTTAACTATTTATATAACTTTCTGAGTTTGTTTAAATTGCACACTTGATCATTAACGTATGAAAACATCTATTTCTGAGTTGGAACTTAAGCTCTAAAACTCCAGTGCGTTATGTCTTTTGGGCATGTTTACAAGTTTGTTTTTGAAAACAGTTTTTCTAGTATAAAAGCATAAATATATCCCCAAGTTAGATACCTTTTGAAAGTAGAAATCTAAAACTTAAATAGGAATATAAACAAAAAATCTCTTAATGGGTCAAAAAATCTTTTCAGTTATTATTCTTTTAATTAATGGTTTTCTGAATGTTAATCCAAAATTAATCCTTAATCGGTACTTGTTGGTCTAGCTTTTGAAAATAATAGGAACTCATTGTGTGTGTTTGTGTAGGAATTATTGAGCCCATTAAATCTGGAATTAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAGGAAAACATCCAGCGGAAAAAACTTGATGTTGAGATGGAAGAGACAGAAGCAGATGTGAAAAAACGGGAGGTATGTTATTTTTATCTTACAGTTGGTTGGGAAAAATGATAATTATTAGCTAAGACTTTGAAGTTGATGCTTTCCTCTTTCTGAAACTCATATCAAATAGCAGAAGGCAGCATATAGCATATATGCATGTCTTTTAGCGGGAATGGTATATCATAGGGGACCATCAACTTTTGGAAGGTCTTCAGATTTTCCTGCAGTTTTTATTACCTGGTGGCTTCTACTGCCCGCTTCGTGCACATTATTAAAATCCAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTTAAAGAAATACGCAAGGTTTTCTATTGTGATCTCTGCAACAAACAGTACAAGTTGGCTATGGAATTTGAAGCGCATCTCAGCTCATATGATCATAATCATAGAAAGGTAGGAAATTAAGCGTTTACTCATAAGTACTCCCTGTCTAGCAAAATCGTCATTCTCCTTTATTTCCTCTTCGAAGTTGCATCGAATCTAAAACATTGTTGGATGAGATTGCAGCGTTTTAAAGAAATGAGAGAAATGCATGGTTCAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGAGAGATGGCAAAATTTGCTCAAATGTATCTCCCTTTCCTCACTTTTTTTTTCTTTCAATAACTTCTTTTGTGATCCCATTTTAAGTTTCTCTTTATATTTTCATTTTGTGTGATTCTGTTTACATTTTCTTTCATGTTAAAACTAGTGCGGATGCCCGTAAGAAGGAGCAGCAAATGCTGGAGCAACAAGAAAGATCAGCCACGGCCCCTGCTTCTACTGAAATTAGAAATGCTACATCACTTGCAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCGAAGGTAAAGCTAAAGTGTTAATGACGTTTTGTTTTTAAAACTAGTTTGCAATTGATTCTGAATATTTTGTTCTTTGTTTTTTACGAGTCCATTCATTCTGAAATTTGTTGATGCTTGATTGATTGCTCATTCGAAAGGTAATGAGTGATATTATCTGGTTCATCTTTTGGAGTGTTTAGGACTCAATAAGTAACCAATTTCCAGAAGGACCGGTTCCTATGGGAGCAAAGCACAGCAGTGTTGGCATTATTGCTTGCTCGTTCATGTTCGTTCCAAACAATGTTTGGAACGTATCAACCATTGCTTGGTCGTTCGTGTTTCTTGTTACCACAGAATAATAATATAGGGGAATTAATTGAAAGGTATCTCGTCTCTAATTTCTTGTTGACTGATGTTATTGCAGAAGATTTTTGGTGGAGCCACAAAGAAACCTAAAGTAGTAGCCCCTGTAGCTTCAGTTTTCGGGAATGATAGTGATGAGGAATAGCATTCAAAGAGTTCCCAAGTTGCTTTGCATCTTTTGTATGTGTAAGGAAACATCTTGAAGTTCATGTATTCTTATTATGGCAGTAGAGACATTATTGTTTAAACTTGCTCGCTCGCTCTTAGAATGTTAATTTTGAGATATCATATCGTGTGATTTAGTCTGATGAACAGATATCCATACAACTCTCTGTGCTATTGATATGTTCTGTTTATTATAACATCTTACTTACTGAAA

mRNA sequence

AACGCAGCTTCTGCAGGTGCTCGTTGAAACAAACAACAATCCAATTCCCATCTTGTTGACCTAATTTCTCTCAACTTCAGGTTGGACAAAATGGATAAACGGAGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGCCTATGCAAAGGAGCAGGATTCTCTTGGTGATGACTTCATAGATGATTTTCGCTTGCCCATCAACCATAGACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCGTTGGACACTCAATTAACTTCATCAAATGTGGGCTATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGAAAGGACGAGCAAGGAATTATTGAGCCCATTAAATCTGGAATTAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAGGAAAACATCCAGCGGAAAAAACTTGATGTTGAGATGGAAGAGACAGAAGCAGATGTGAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTTAAAGAAATACGCAAGGTTTTCTATTGTGATCTCTGCAACAAACAGTACAAGTTGGCTATGGAATTTGAAGCGCATCTCAGCTCATATGATCATAATCATAGAAAGCGTTTTAAAGAAATGAGAGAAATGCATGGTTCAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGAGAGATGGCAAAATTTGCTCAAATTGCGGATGCCCGTAAGAAGGAGCAGCAAATGCTGGAGCAACAAGAAAGATCAGCCACGGCCCCTGCTTCTACTGAAATTAGAAATGCTACATCACTTGCAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCGAAGAAGATTTTTGGTGGAGCCACAAAGAAACCTAAAGTAGTAGCCCCTGTAGCTTCAGTTTTCGGGAATGATAGTGATGAGGAATAGCATTCAAAGAGTTCCCAAGTTGCTTTGCATCTTTTGTATGTGTAAGGAAACATCTTGAAGTTCATGTATTCTTATTATGGCAGTAGAGACATTATTGTTTAAACTTGCTCGCTCGCTCTTAGAATGTTAATTTTGAGATATCATATCGTGTGATTTAGTCTGATGAACAGATATCCATACAACTCTCTGTGCTATTGATATGTTCTGTTTATTATAACATCTTACTTACTGAAA

Coding sequence (CDS)

ATGGATAAACGGAGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGCCTATGCAAAGGAGCAGGATTCTCTTGGTGATGACTTCATAGATGATTTTCGCTTGCCCATCAACCATAGACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCGTTGGACACTCAATTAACTTCATCAAATGTGGGCTATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGAAAGGACGAGCAAGGAATTATTGAGCCCATTAAATCTGGAATTAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAGGAAAACATCCAGCGGAAAAAACTTGATGTTGAGATGGAAGAGACAGAAGCAGATGTGAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTTAAAGAAATACGCAAGGTTTTCTATTGTGATCTCTGCAACAAACAGTACAAGTTGGCTATGGAATTTGAAGCGCATCTCAGCTCATATGATCATAATCATAGAAAGCGTTTTAAAGAAATGAGAGAAATGCATGGTTCAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGAGAGATGGCAAAATTTGCTCAAATTGCGGATGCCCGTAAGAAGGAGCAGCAAATGCTGGAGCAACAAGAAAGATCAGCCACGGCCCCTGCTTCTACTGAAATTAGAAATGCTACATCACTTGCAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCGAAGAAGATTTTTGGTGGAGCCACAAAGAAACCTAAAGTAGTAGCCCCTGTAGCTTCAGTTTTCGGGAATGATAGTGATGAGGAATAG

Protein sequence

MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKKLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSATAPASTEIRNATSLADQDQRKTLKFGFSSKGGTSKKIFGGATKKPKVVAPVASVFGNDSDEE

Homology

[Close]

BLAST of CmoCh10G012610 vs. ExPASy Swiss-Prot
Match: A2A6A1 (G patch domain-containing protein 8 OS=Mus musculus OX=10090 GN=Gpatch8 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.5e-25
Identity = 74/224 (33.04%), Postives = 138/224 (61.61%), Query Frame = 0


Query: 51  VEQASLDTQLTSSNVGYRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDD 110
           +EQASLD  + S N+G+RLLQK GWK G+GLGK  QG  +PI   ++   +G+G+ E + 
Sbjct: 29  IEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMGRMEMEL 88

Query: 111 FFTAEENIQRKKLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLA 170
            +  +   +R+ L+VE E+TE   +K +   ++E+ I   ++++R  FYC+LC+KQY+  
Sbjct: 89  DYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEDLRANFYCELCDKQYQKH 148

Query: 171 MEFEAHLSSYDHNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQ 230
            EF+ H++SYDH H++R K++++   + +   R++++++++E+ + +  ++A        
Sbjct: 149 QEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDEKKQEKALRRLHELA-------- 208

Query: 231 MLEQQERSATAPASTEIRNATSLA-DQDQRKTLKFGFSSKGGTS 273
             EQ++++  AP S  +   T++A D+D  +  K   S+  G S
Sbjct: 209 --EQRKQAECAPGSGPMFRPTTVAVDEDGGEEDKDESSTNSGAS 242

[Close]

BLAST of CmoCh10G012610 vs. ExPASy Swiss-Prot
Match: Q9UKJ3 (G patch domain-containing protein 8 OS=Homo sapiens OX=9606 GN=GPATCH8 PE=1 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 4.5e-25
Identity = 63/179 (35.20%), Postives = 120/179 (67.04%), Query Frame = 0


Query: 51  VEQASLDTQLTSSNVGYRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDD 110
           +EQASLD  + S N+G+RLLQK GWK G+GLGK  QG  +PI   ++   +G+G+ E + 
Sbjct: 29  IEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMGRMEMEL 88

Query: 111 FFTAEENIQRKKLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLA 170
            +  +   +R+ L+VE E+TE   +K +   ++E+ I   ++++R  FYC+LC+KQY+  
Sbjct: 89  DYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEDLRANFYCELCDKQYQKH 148

Query: 171 MEFEAHLSSYDHNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQ 229
            EF+ H++SYDH H++R K++++   + +   R++++++++E+ + +  ++A+ RK+ +
Sbjct: 149 QEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDEKKQEKALRRLHELAEQRKQAE 207

[Close]

BLAST of CmoCh10G012610 vs. ExPASy Swiss-Prot
Match: Q7Z570 (Zinc finger protein 804A OS=Homo sapiens OX=9606 GN=ZNF804A PE=2 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07
Identity = 27/87 (31.03%), Postives = 61/87 (70.11%), Query Frame = 0


Query: 140 AEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGSSSR 199
           AE+E  I   +++++  FYC+LC+KQY    EF+ H++SYDH H++R KE+++   + + 
Sbjct: 40  AEKENTIAKALEDLKANFYCELCDKQYYKHQEFDNHINSYDHAHKQRLKELKQREFARNV 99

Query: 200 DDRNKREQQREEREMAKFAQIADARKK 227
             +++++++++E+ + +  ++A+ RK+
Sbjct: 100 ASKSRKDERKQEKALQRLHKLAELRKE 126

[Close]

BLAST of CmoCh10G012610 vs. ExPASy Swiss-Prot
Match: A2AKY4 (Zinc finger protein 804A OS=Mus musculus OX=10090 GN=Znf804a PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07
Identity = 27/87 (31.03%), Postives = 61/87 (70.11%), Query Frame = 0


Query: 140 AEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGSSSR 199
           AE+E  I   +++++  FYC+LC+KQY    EF+ H++SYDH H++R KE+++   + + 
Sbjct: 40  AEKENTIAKALEDLKANFYCELCDKQYYKHQEFDNHINSYDHAHKQRLKELKQREFARNV 99

Query: 200 DDRNKREQQREEREMAKFAQIADARKK 227
             +++++++++E+ + +  ++A+ RK+
Sbjct: 100 ASKSRKDERKQEKALQRLHKLAELRKE 126

[Close]

BLAST of CmoCh10G012610 vs. ExPASy Swiss-Prot
Match: A4D1E1 (Zinc finger protein 804B OS=Homo sapiens OX=9606 GN=ZNF804B PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 8.0e-06
Identity = 23/79 (29.11%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 150 VKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGSSSRDDRNKREQQR 209
           +++++  FYC+LC+KQY    EF+ H++SYDH H++R KE+++   + +   ++ +++++
Sbjct: 48  LEDVKANFYCELCDKQYHKHQEFDNHINSYDHAHKQRLKELKQREFARNVASKSWKDEKK 107

Query: 210 EEREMAKFAQIADARKKEQ 229
           +E+ + +  Q+A+ R++ +
Sbjct: 108 QEKALKRLHQLAELRQQSE 126

[Close]

BLAST of CmoCh10G012610 vs. ExPASy TrEMBL
Match: A0A6J1HAE8 (G patch domain-containing protein 8 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462032 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 4.7e-158
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL
Sbjct: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 121 KLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 180
           KLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD
Sbjct: 121 KLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 180

Query: 181 HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSATA 240
           HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSATA
Sbjct: 181 HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSATA 240

Query: 241 PASTEIRNATSLADQDQRKTLKFGFSSKGGTSKKIFGGATKKPKVVAPVASVFGNDSDEE 300
           PASTEIRNATSLADQDQRKTLKFGFSSKGGTSKKIFGGATKKPKVVAPVASVFGNDSDEE
Sbjct: 241 PASTEIRNATSLADQDQRKTLKFGFSSKGGTSKKIFGGATKKPKVVAPVASVFGNDSDEE 300

[Close]

BLAST of CmoCh10G012610 vs. ExPASy TrEMBL
Match: A0A6J1HA90 (G patch domain-containing protein 8 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462032 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.4e-156
Identity = 299/300 (99.67%), Postives = 299/300 (99.67%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL
Sbjct: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 121 KLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 180
           KLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD
Sbjct: 121 KLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 180

Query: 181 HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSATA 240
           HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSATA
Sbjct: 181 HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSATA 240

Query: 241 PASTEIRNATSLADQDQRKTLKFGFSSKGGTSKKIFGGATKKPKVVAPVASVFGNDSDEE 300
           PASTEIRNATSLADQDQRKTLKFGFSSKGGTS KIFGGATKKPKVVAPVASVFGNDSDEE
Sbjct: 241 PASTEIRNATSLADQDQRKTLKFGFSSKGGTS-KIFGGATKKPKVVAPVASVFGNDSDEE 299

[Close]

BLAST of CmoCh10G012610 vs. ExPASy TrEMBL
Match: A0A6J1HY59 (G patch domain-containing protein 8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467909 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 5.7e-156
Identity = 297/300 (99.00%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           MDKRSYSSRLETNN NKAYA+EQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL
Sbjct: 1   MDKRSYSSRLETNNRNKAYAREQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 121 KLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 180
           KLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD
Sbjct: 121 KLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 180

Query: 181 HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSATA 240
           HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSA A
Sbjct: 181 HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSAKA 240

Query: 241 PASTEIRNATSLADQDQRKTLKFGFSSKGGTSKKIFGGATKKPKVVAPVASVFGNDSDEE 300
           PASTEIRNATSLADQDQRKTLKFGFSSKGGTSKKIFGGATKKPKVVAPVASVFGNDSDEE
Sbjct: 241 PASTEIRNATSLADQDQRKTLKFGFSSKGGTSKKIFGGATKKPKVVAPVASVFGNDSDEE 300

[Close]

BLAST of CmoCh10G012610 vs. ExPASy TrEMBL
Match: A0A6J1HVU1 (G patch domain-containing protein 8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467909 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.1e-154
Identity = 296/300 (98.67%), Postives = 297/300 (99.00%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           MDKRSYSSRLETNN NKAYA+EQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL
Sbjct: 1   MDKRSYSSRLETNNRNKAYAREQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 121 KLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 180
           KLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD
Sbjct: 121 KLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 180

Query: 181 HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSATA 240
           HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSA A
Sbjct: 181 HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSAKA 240

Query: 241 PASTEIRNATSLADQDQRKTLKFGFSSKGGTSKKIFGGATKKPKVVAPVASVFGNDSDEE 300
           PASTEIRNATSLADQDQRKTLKFGFSSKGGTS KIFGGATKKPKVVAPVASVFGNDSDEE
Sbjct: 241 PASTEIRNATSLADQDQRKTLKFGFSSKGGTS-KIFGGATKKPKVVAPVASVFGNDSDEE 299

[Close]

BLAST of CmoCh10G012610 vs. ExPASy TrEMBL
Match: A0A5D3CGE1 (G patch domain-containing protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004660 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 2.3e-144
Identity = 274/300 (91.33%), Postives = 289/300 (96.33%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQL 60
           M+ R +SSRLETNNP+K YA+EQ+SLGDDFIDDFRLPINH+PTENVDLDNVEQASLDTQL
Sbjct: 27  MEYRGFSSRLETNNPSKGYAREQESLGDDFIDDFRLPINHKPTENVDLDNVEQASLDTQL 86

Query: 61  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRK 120
           TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSG+RDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 87  TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQRK 146

Query: 121 KLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 180
           KLDVE+EETE   KKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD
Sbjct: 147 KLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 206

Query: 181 HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQERSATA 240
           HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKK+QQ+LEQQER+A A
Sbjct: 207 HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKQQQLLEQQERAAEA 266

Query: 241 PASTEIRNATSLADQDQRKTLKFGFSSKGGTSKKIFGGATKKPKVVAPVASVFGNDSDEE 300
           P STE+RNATS+ADQDQRKTLKFGFSSKGGTSK +FGGA KKPK VAPVASVFGNDSD+E
Sbjct: 267 PVSTELRNATSVADQDQRKTLKFGFSSKGGTSKNMFGGAKKKPK-VAPVASVFGNDSDDE 325

[Close]

BLAST of CmoCh10G012610 vs. TAIR 10
Match: AT5G26610.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 348.6 bits (893), Expect = 5.0e-96
Identity = 200/306 (65.36%), Postives = 237/306 (77.45%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNK-AYAKE---QDSLGDDFIDDFRLPINHRPTENVDLDNVEQASL 60
           MD     S+ E ++  K  Y K+   Q+S  +   ++FRLPI HR TENVDL++VEQASL
Sbjct: 1   MDISRRESKTEASSREKRIYEKDQMNQESFIEGLAEEFRLPITHRVTENVDLEDVEQASL 60

Query: 61  DTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEEN 120
           D +++SSNVG+RLLQKMGWKGKGLGK EQGI EPIKSGIRD +LG+GKQEEDD+FTAEEN
Sbjct: 61  DVKISSSNVGFRLLQKMGWKGKGLGKQEQGITEPIKSGIRDRRLGLGKQEEDDYFTAEEN 120

Query: 121 IQRKKLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHL 180
           IQRKKLD+E+EETE   KKREVLAERE+KIQ++VKEIRKVFYC+LC+KQY+  MEFE HL
Sbjct: 121 IQRKKLDIEIEETEEIAKKREVLAEREQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHL 180

Query: 181 SSYDHNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQER 240
           SSYDHNH+KRFKEM+EMHG+S RD+R KREQQR+EREM K   +ADARK+ Q    QQE 
Sbjct: 181 SSYDHNHKKRFKEMKEMHGASGRDERKKREQQRQEREMTK---MADARKQHQMQQSQQEV 240

Query: 241 SATAPASTEIRNATS-LADQDQRKTLKFGFSSKGG-TSKKIFGGATKKPKVVAPVASVFG 300
               P S   +   + LA QDQRKTLKFGFSSK G  SK     + KKPKV   +ASVFG
Sbjct: 241 PENVPVSAPAKTTVAPLAVQDQRKTLKFGFSSKSGIISKSQPTSSIKKPKVA--IASVFG 300

[Close]

BLAST of CmoCh10G012610 vs. TAIR 10
Match: AT5G26610.2 (D111/G-patch domain-containing protein )

HSP 1 Score: 348.6 bits (893), Expect = 5.0e-96
Identity = 200/306 (65.36%), Postives = 237/306 (77.45%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNK-AYAKE---QDSLGDDFIDDFRLPINHRPTENVDLDNVEQASL 60
           MD     S+ E ++  K  Y K+   Q+S  +   ++FRLPI HR TENVDL++VEQASL
Sbjct: 1   MDISRRESKTEASSREKRIYEKDQMNQESFIEGLAEEFRLPITHRVTENVDLEDVEQASL 60

Query: 61  DTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEEN 120
           D +++SSNVG+RLLQKMGWKGKGLGK EQGI EPIKSGIRD +LG+GKQEEDD+FTAEEN
Sbjct: 61  DVKISSSNVGFRLLQKMGWKGKGLGKQEQGITEPIKSGIRDRRLGLGKQEEDDYFTAEEN 120

Query: 121 IQRKKLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHL 180
           IQRKKLD+E+EETE   KKREVLAERE+KIQ++VKEIRKVFYC+LC+KQY+  MEFE HL
Sbjct: 121 IQRKKLDIEIEETEEIAKKREVLAEREQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHL 180

Query: 181 SSYDHNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQER 240
           SSYDHNH+KRFKEM+EMHG+S RD+R KREQQR+EREM K   +ADARK+ Q    QQE 
Sbjct: 181 SSYDHNHKKRFKEMKEMHGASGRDERKKREQQRQEREMTK---MADARKQHQMQQSQQEV 240

Query: 241 SATAPASTEIRNATS-LADQDQRKTLKFGFSSKGG-TSKKIFGGATKKPKVVAPVASVFG 300
               P S   +   + LA QDQRKTLKFGFSSK G  SK     + KKPKV   +ASVFG
Sbjct: 241 PENVPVSAPAKTTVAPLAVQDQRKTLKFGFSSKSGIISKSQPTSSIKKPKVA--IASVFG 300

[Close]

BLAST of CmoCh10G012610 vs. TAIR 10
Match: AT5G26610.3 (D111/G-patch domain-containing protein )

HSP 1 Score: 348.6 bits (893), Expect = 5.0e-96
Identity = 200/306 (65.36%), Postives = 237/306 (77.45%), Query Frame = 0


Query: 1   MDKRSYSSRLETNNPNK-AYAKE---QDSLGDDFIDDFRLPINHRPTENVDLDNVEQASL 60
           MD     S+ E ++  K  Y K+   Q+S  +   ++FRLPI HR TENVDL++VEQASL
Sbjct: 1   MDISRRESKTEASSREKRIYEKDQMNQESFIEGLAEEFRLPITHRVTENVDLEDVEQASL 60

Query: 61  DTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEEN 120
           D +++SSNVG+RLLQKMGWKGKGLGK EQGI EPIKSGIRD +LG+GKQEEDD+FTAEEN
Sbjct: 61  DVKISSSNVGFRLLQKMGWKGKGLGKQEQGITEPIKSGIRDRRLGLGKQEEDDYFTAEEN 120

Query: 121 IQRKKLDVEMEETEADVKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHL 180
           IQRKKLD+E+EETE   KKREVLAERE+KIQ++VKEIRKVFYC+LC+KQY+  MEFE HL
Sbjct: 121 IQRKKLDIEIEETEEIAKKREVLAEREQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHL 180

Query: 181 SSYDHNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKEQQMLEQQER 240
           SSYDHNH+KRFKEM+EMHG+S RD+R KREQQR+EREM K   +ADARK+ Q    QQE 
Sbjct: 181 SSYDHNHKKRFKEMKEMHGASGRDERKKREQQRQEREMTK---MADARKQHQMQQSQQEV 240

Query: 241 SATAPASTEIRNATS-LADQDQRKTLKFGFSSKGG-TSKKIFGGATKKPKVVAPVASVFG 300
               P S   +   + LA QDQRKTLKFGFSSK G  SK     + KKPKV   +ASVFG
Sbjct: 241 PENVPVSAPAKTTVAPLAVQDQRKTLKFGFSSKSGIISKSQPTSSIKKPKVA--IASVFG 300

[Close]

BLAST of CmoCh10G012610 vs. TAIR 10
Match: AT2G42330.1 (GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain )

HSP 1 Score: 52.8 bits (125), Expect = 5.7e-07
Identity = 27/73 (36.99%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 62  SSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIG----KQEEDDFFTAEENI 121
           S  +G +LL+KMG+KG+GLGK++QGI+ PI+  +R   +G+G    K++    F     +
Sbjct: 103 SGGIGMKLLEKMGYKGRGLGKNQQGIVAPIEVQLRPKNMGMGYNDFKEKNAPLFPCLNKV 162

Query: 122 QRKKLDVEMEETE 131
           + KK  V +  +E
Sbjct: 163 EEKKKSVVVTVSE 175

[Close]

BLAST of CmoCh10G012610 vs. TAIR 10
Match: AT2G42330.2 (GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain )

HSP 1 Score: 52.8 bits (125), Expect = 5.7e-07
Identity = 27/73 (36.99%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 62  SSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIG----KQEEDDFFTAEENI 121
           S  +G +LL+KMG+KG+GLGK++QGI+ PI+  +R   +G+G    K++    F     +
Sbjct: 103 SGGIGMKLLEKMGYKGRGLGKNQQGIVAPIEVQLRPKNMGMGYNDFKEKNAPLFPCLNKV 162

Query: 122 QRKKLDVEMEETE 131
           + KK  V +  +E
Sbjct: 163 EEKKKSVVVTVSE 175

The following BLAST results are available for this feature:

BLAST of CmoCh10G012610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2A6A1	3.5e-25	33.04	G patch domain-containing protein 8 OS=Mus musculus OX=10090 GN=Gpatch8 PE=1 SV=...	[more]
Q9UKJ3	4.5e-25	35.20	G patch domain-containing protein 8 OS=Homo sapiens OX=9606 GN=GPATCH8 PE=1 SV=2	[more]
Q7Z570	1.5e-07	31.03	Zinc finger protein 804A OS=Homo sapiens OX=9606 GN=ZNF804A PE=2 SV=3	[more]
A2AKY4	1.5e-07	31.03	Zinc finger protein 804A OS=Mus musculus OX=10090 GN=Znf804a PE=2 SV=1	[more]
A4D1E1	8.0e-06	29.11	Zinc finger protein 804B OS=Homo sapiens OX=9606 GN=ZNF804B PE=2 SV=2	[more]

BLAST of CmoCh10G012610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAE8	4.7e-158	100.00	G patch domain-containing protein 8 isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HA90	3.4e-156	99.67	G patch domain-containing protein 8 isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HY59	5.7e-156	99.00	G patch domain-containing protein 8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1HVU1	4.1e-154	98.67	G patch domain-containing protein 8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5D3CGE1	2.3e-144	91.33	G patch domain-containing protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of CmoCh10G012610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26610.1	5.0e-96	65.36	D111/G-patch domain-containing protein	[more]
AT5G26610.2	5.0e-96	65.36	D111/G-patch domain-containing protein	[more]
AT5G26610.3	5.0e-96	65.36	D111/G-patch domain-containing protein	[more]
AT2G42330.1	5.7e-07	36.99	GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domai...	[more]
AT2G42330.2	5.7e-07	36.99	GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domai...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 60..105 e-value: 3.5E-17 score: 73.1
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 63..103 e-value: 1.8E-15 score: 56.5
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 62..107 score: 16.69919
IPR022755	Zinc finger, double-stranded RNA binding	PFAM	PF12171	zf-C2H2_jaz	coord: 157..184 e-value: 1.1E-5 score: 25.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..267
None	No IPR available	PANTHER	PTHR47251	FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED	coord: 6..300
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 159..181
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 155..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G012610.1	CmoCh10G012610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding