CmoCh10G011950 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G011950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor IIIB 60 kDa subunit-like
Location	Cmo_Chr10: 10958347 .. 10971229 (+)
RNA-Seq Expression	CmoCh10G011950
Synteny	CmoCh10G011950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGAAATCCATTAACTGAATTCCACCGGCATCGCCCGCCGTTTTGATTTTCTTCTCTTTCGATCGCCCCTCTCACGCCGCCGCCGCCGCCGCCACCGCCGCGCAAACCCCCATCTTCTTATCTCGCGCTCGCTATCTCGCCCGCTGTCGAGGTCTGCTCCAATGAGATAGTTTTTTCTTGTCGTTCTTCTATTTTGTTTCTTCGATTCAATCAACTTCGTAATAGAATCAAAACTTTTCTTTCTCCTTTTTGTTTACACGACAGTCGGACAATCTTTACTCGAAATTTCAGTTTGTATTCATAAACCTAGTTTTTTTGTTTTTTGCAATTTTCAGTTCGGTTGGATTTTCTCTTATGCATGATTCTTAAGATCAATTTATGCATCATTCGTCGTTCTTTTGATTGTTATTATGTTGTTTGTACCGATTAATTTTTAGTTTTCCGACCGTTGTAGGTGATTGTGACACACTGCAACATGGTGTGGTGCAGTAATTGTGTAAAAAATGTTGCTGGGTCTCGAGATAATGCCGGTTTCCAGTTAGTATTTATTTTAAAATTTAATCTATGAACATTTGGCTTATGATATGACAATGCTTACTTAGCTTTCTCTGTGTGTTTTTGTATCTTTGTTTAATAGATACTGTGATATGTGTGGGAAGGTGTTGGATTTTTACAATTTCTCTCAGGATCCTACTTTTACAAAGGATTCTGGAGGGCAGGTACTTAAATTCTAGTTATGTTGTTTTTCAAAGATATATTATACTGTTATTATGCATAAAATTGTCAACCCTCACCTATGATATTCATATTGATGTCCGAATGAATTTTGCAGAGTCAATTGTCAGGAAATTTTGTTAGATCTATTCAGAGTAATTATTCGGCTTCACGGGAAAGGACATTGAGTAGAGGTTTGCTGTTTGACTTACTTTCTCTTCTTATGATAAACATGTGTAAACGACCTAGGTTCTCCAAAATTAACCAAGTATATCTGAACTTTCTTATCCTGTATCAGCTTTTGATGATATGAGATATATGAGGAATGGCTTAAACATGGGTGAGAGTGATGAAATAATTCGTGTAGCTGGGGCATTTTATAGAGTAAGGTTTCTTTTTCTCTGAGCCCTATGTATGTGATGTTTATATGTGCATATGTACTTATTGGATTGATGTTTCTTCACCTTTAAATGTACTGAAGATTGCATTAGAGAGAAATTTTACCCGTGGACGCAATACAGAGTTTGTTCAAGCTGCTTGCCTTTACATTGCTTGTCGGTATGAGATTCGCCTTCCCTGAATTACAATTATTCCTGACATCTATTCAAGCTGATCATATATTTTATTTTTGTTGCATTGATTGACAATTTAGATTTGATAATATGAGGCCATGCAAGGATTTTTTTTGTGAACAAGTTCTTTTGATACCCCCAAGAAGCTTGTCAGGAAATGAAAAGCCTATGCTTCTGAATGATATAATCTCATTGGGATTATCTATTTGAACCTCTTTTCTTAGTATATTGTTCCATTGCTTTCCACAAAAAGTTATTTTCTGTTCATAATTACTGCCCACCATTATATCCATTCCCATGTGTCATTGTATTATTTATTTCTTAGATAGTTGTGAGTGTCCAAGTCAATTTATGCACAAGTTTTATGAGAAACCTTCGTAGGATTTATAATAATTGGCCTCGAAACATTCATACAAGCATTTAAATAGGTGGCTATGTGGTTTGAACCCATGATCGAATGACATTTGGATTTGCACTGTATCCCTTTGACTATTAGACCAATGTAGTTATCTTACTATGCCCACCTTTGAAATAGGCATTCTGCACAGTGTTAATGTATTTCGTAAGGATGTGAATAGATCCCCGTTTCGCAACTACCATTATAAGAGAATACAAGAAAAATGATACTGTCTAAGTTCTTTGTCAAAAATGAAAAATGATAGTGACCTAGGTATTTTGAAGAATCCAAAAGCTCCTTTGAGCCAAGCTCGTCAGTAAGCTTTCACGATCATTATTTACCTCATTGCTACCCTTCCATTATTTGTAGTTGTTGAATCTACTTACAGTTTGAGCATAAGAAACTAAATTTAGTAAAAGAGTTTCCTCTCTCCCTCTAATGCGAGTTGGAGAGGTTGGTGAAAATCCAAAGTAAAAGATTTGTGGCGAACTGTTTTAGTTGAAGATTTTTGCATACTGAAGTCAATGATGGTGAAGCTTAGTTGGGAACCTTATCTTGGGCGAGGGATTGTCTCATTTTCCTCACTACTAGACTTAAGGTATAGAGATGTACAAGTTACAACCGCATGCTTGATGACCAACATAAAGTTTTGTTTGACAATTTTCCTTTTTCTTGGATCAATCTAGATTGGAAGGTGTTTATGTAATAGTTGTTCTTGGTCAGGGCTCCTCTAGCCTTCCCATCCCCTCCTTTTTTTTTCTTTTATCTACTAAATATATGGTCTTTTGATTAAAAAAGGTTAAAGAACATATTTTTCTTCGTACTTCCATTGAAGTAATGGTTTAATTCAAGAACTTCAATGTATAATAATTTAGTCTCTTTAGTTTAAAATTCGTTAATGGTTTGTATATGAAGTTTAATATGTAAGAGTATACCCTCTGTAGTTTATGGTTTGGAATAATATGTTCCTTGTAGTTTAAATTTTATAACAAGTTAATCCCTGTCATGAAAAGTCGCATTAAGTTGGGACTTGCTTGTACTTAATGGGATTTGTAGCATAGGTAGATTAACTAATTGCTTGGGCCTGAATGCAATACATGAAATCTAGCGTGCCCTCACTATGTCTATATGTGTGTGTGTGTGTGTATGATATATATATGTATGTATGTATGAATGAATGCATATATGTATGTGTTTATGTATATTCATGTACGTGCTTATATGCATGTCAAAAATTTGCTAATGTTCTTTCATTATCAATAAAGGTACTAATATTTCCTCAACATGTTTAGCCCTATGTACATATATTAGAAAGTGATGTGTCATGCTGTATTTGTGTTATGTGTTGTGTGTTGTATAGGTTTGTCCTTCATGTTAGAGAACCTATGTAAACTTTTATTTGGTAACTGTATCATTTCTTGATCAACTCTAGTTTCTACATTGGAAGGCACTCATGTAATAGTTGTCCTTGGTTTGGGCTCCTCTGCCCCTCCCTTCTTTTTTCTTTTCTTTTTGTGCAGTGAATATATGTTTTCTTATTGCAAAGAGGTTAAAAAAACACCTCTGGTCGTTATACTTACAAGCTACATTGAAGTAACAATTAAGTATTTGAAATTTAATGTGTAATCATTTAATTCTTGTAGTTTAATTCAGTCCTTCAACTTTAGTAAATAACAAGTTAGTTCTTTTGGTTAAAATCTGGAATGATTTAGTCCCCTTTAATTTAAATTTTGTGACAATATAATCTCTACTATGAAAATTCTAAATAGTAGCAGGAATTGTGGTGTTTATAGATTGATAAATCACTTGGGATCTGATGTGTTTTTTAAATTAGAGGGACTAAAATCAAGTAAAAGATAGGATGTACTTCAACTCTATGAACTTTTTCATGAGGGACTAAATTTTTTAAAATTTTAAATAGGTGGGACTAAATCATGACATACTGTGAAGGGAGTTAATCGTAACAAATTTTAAGCTACAAGTACTAAATTGTTATGGATTAAAGTTCAAATACTAAATTGTTACCTATAAGAAAAAGGAAACTAAATTTTTACATCCATGAAAAATATAAGCGAGGAAGGGGGTGAAGATTGAGTTGGTAAGTGTCAACTTAGCCTGTTTTGGGACAAGGGTCTTCCATTTATCAGTTTTTGGTTGCACTTTATCGTTGATTTGATGCCAAAACGTTGTTTCGTGAGGATTTCATTAGAATTGAAGCCCTAGGCAAACCATTGGCCTACCTCTCACTTTGCATCAGGATATTGTGTTTCAGTGGACATTTTGGAATATTTCTATTGAGACCCTTGTTCATAAATGCACACTGTTTATCAGCTCTCCCTATAGATGTGCATGGACTCATGCATGTATCTTGGTGGACCAAAATTTTGTTGAATGATTATGATGAATGATGCACTAATATCGAACTTATATTTTGTTATGTAGGGAAAAGAATAAACCATATCTTCTAATTGACTTTTCAAATTATTTGAGGATAAATGTGTAAGGTTTCTCTTCCCTTACTATATGTATTTTGATTTGTTGGTTTTTTCTTAATTACTTTTTATTTTATTTTTATATATATTAGCATCGTTACACCTTTGAAGTTTTTTGCAGCTATGTGTTGGGCGCTGTATTTTTGCAACTTTGTAAAGTGCTAAGACTTGAAGAGCACCCTATTGTTCAAAAGCCAGTTGATCCTTCCCTTTTTATCGACAAATTTACTCAATGTAAGTCTTTTATGTCACTTGAGTTGCAAGTTTATGTGGCTTTTTCTTGTGTGAAGAAAAGGCAGACTCTAGTTGCTTTCATACATTAAAAAGGAAGAATACAACCTAATAAATAGAAGAAACTATTGATGTATAAAAGAAAATGAGCAATGGTAAAAACTATATTGATTAAGACAATTTAGATTTTCAGCTCGATAGGCTTTAGTGGAAAATGTCAATAGCTTGTAAACGTGCTTCTTGATACAAAACGTGGGGGTTGTTGATTTATGCAAACCTTGGACAAGTGATGTGTTTGAACCTCCACTTTTACTTGGTTTTTACTATTAGTGAACCACTTTGCCAAGGTTTATCTTTTTTTTGTTTGATTATCTAATTTTTGACAGCATATAATTTTTCATTAAATTTATTTTTCACTATTTTGGTTGTTTTGATGTTAAATTTACATTTTTAATATATTTTAAAGTCCTAGATATTTAAATATATTTGAAAAATAATTTAAAAAATCATGCGTGCCCAATGTGTCCGCCTCATACCTTTTTTTTTTAGAAATTAACATGTAATGCTATGTGTATTTGTATCCCATGTTAGCACGTTTTAGATTTAACATTTTGAGTACTGAGATGTCATAACCAAAATGGTTCCTAGGTTTGCTTGGAGGAACAAAGGACGATGGAATGAAAAAGGAGGTTTCCAGAACTGCATTGAAGATTATAACCAGCATGAAGCGTGATTGGATGCAGGTCTGGTATGGGAACCACCATATTTTCTATCAACTTCTTGTTGGTTCTTTTTGAAGTTGATTTTGGGTCCTAACGGTTCTTTCAGACTGGGAGAAAGCCTAGTGGCCTATGTGGTGCGGCTTTATACATATCTGCACTTTCGCATGGTGTCAAGTGTTCCAAGTCTGACATTGTAAGTAATGTTGATTGTTCAGTGTTAATATTTCCTTTTGTACTTCTTTTTGATGAGGAACATTGTTTTTCAACTTGAATGATTACCAAATAGATTGTGCTCTTTTCCTTATCTTTTACTTATCAAATAAGGAACGAATATTTCTCTTACCTTTTGTTGTAGTATTTTCTGGTTCTATTGTCTAGGATTCATGTCAATCTTCAGCAATGTTCATTGTATATTTAAATTTTTTGTTACAATGAGCAATGCTGAATTATCTCAAAAATTACTGAATTATCTCAAAGAATGATAAAAATTAGTGCTATCATGAAACAATGAGCAATGCTGTCTTTAACAAGAAAACTCCACTAATTGATACAACTACAATACTTCTTGGAAAAAGACTAAAATAATGACCTAGCTTTTTTTGTTTGTAGGGTTTCTTGAACTTGTTGAACATAGTTCTTTGTTGATCGCAAAGAGGTTCACCAACTACCTACACTATTGTCTTCTTAAAAAAGAAGTTGGTTTGGCCGTTGGATGCCATTTCGGATTTAGTTCTTAGCCTTCTTTCACACAAGGTTTCTAGGAGTTGTAGTTCAGTGAGTTGTTTTGGGCACAAAATATTAGGAACCGAAAGGTGTCTTTGCTGAAATTATGAGACTCCAAGGCAATGTAAAGAAGTTAAACATTGTCATCCTTCCCACTAATAAAGAAAGTTGGAAAGCCATGGCATATTTTTTTTTTATAAGAGTATCAAGTATTTTCTCCCCTATCTAATGATGAAGCTCCTGAGTTATCAAGTATCAAGTTCCAAGTTTTTATTGGGTCTAAGATGTTTCACATTTTGATGTTGCTGGAAAAAATAGGAAAAGAAATAAACTTAAACAACCCCACAACTCAGCTTTTCTTTTGCATGTTGTGAATATTTTCGGAGTTCCCTCAAGTATTGTCAGTTCTAGAGATAACTGATTTGTGGGTACTTTCTGGACGAGGCCATTTTTGCTTTTGAGCCCAGTCTAAGTATATCTTTGAGTTACCATCCTCGATGGATGGCCATACTGAGAGATTCAACAGCTTACTTGAAGATGCCACTTTGTCGATGCTTAACAAAAGAATTGGGTCTAGTTGTTAGACATTGCTCAGTTTTATTTTAACTGACCAGCAGAAACAACCTAGTTATATGATAAAATGCATGTTGAACCTGCAATTTAGACTGTAAATTATTTATTGCGTTCTAATCATTTTTAACCAGAAAAAAACTTCTCATTCTTACGTCAAAATTAAAATAACCCTGGTTAATTAACATTGTAATTTTTTCTTATTTTGATATATTATTTGTTGCCGTCTTATATATGTTGTCCTAAATTTATTTCAGATAAAGATTGTGCATATTTGTGATGCAACATTGACAAAGCGGTTAATTGAGTTCGAGAATACTGAATCTGGCAGCTTAACGGTAACTGATTTGCTTTGAGATGGTCATTACTATCACGTGGTGTATTATTGTTTAATACATGTTATCATTGATGCTAGCATTACACTATTTATAGTCATCAATATCCTTTTAGTTGATCTTATTTTCTTGTGAAGTTCTGTTTTACTTGAGAGAAACTTGTAATGCATTTGACGTGAAGCTAAGATTCTTTAACTTCGTGTAGTTGAGGATATATGGGATTGTGGTTGAGAAGAAGTGGTTTAGTTTTTGGTGATAAAAGTACTTTATGGAGATTCTTGATGCAATGTATGTTTAGTTACTGCTTCCCAGTTCATTTCACTCGTAAGTCTTACCTTTCTTATGCTGTCAAACAGGAGTCTGATCTTTTCTACTCCATTGAAATTAGTTAAGTTATTTATGTTTATATTTTGAAAATGGATAAAGAATCATTTGATATGGAAAAAAATGTCTCTACTGCTAGCTCAACATGATGAAATTTTTATTATGTATTTTTGTTTATACTATTATTTATCTATATATGGAAATGTATGTTATTTTATTCTTGTTCAAGCCTTTTCATGCACGTTGATCTTGGGGAATATCTTCCATCTGGAAATGCTGATATTTCAATGAAACATGTTTTTGCTGATGCCAATAGTTAATAAAATACCCAATTATATTCTAAGCTCGTAAATTTATTCTGCATGTCTTTTATTTTCAAACTAGGGTATAAACCTGAGTATTGATAAGGATCCTTGATTATTTCCTTGTTTAGTTGGAGGAATTTATTGTCATGGCAGACAAGGCCAAGGGAAGCAACTCTGAGCGCACTGATGGATCCAATAATGGCTTGAATTCATCGAGTGATGAAGTACTTTGCGTGCATAAGAATGACACCACAAAGCCATATGCTCTTGGCCTTTGTAGAATTTGTTATGATGATGTGAGTTTCCTCTTTTTCCCATGCTGTAAAAAAGTGATACGTAAATTGTACTTTCTTAAGATCTAGCTAATTTGGTGCAGTTTGTTGAGCTTTCCGGAGGACTTGATGGGGGAGCAGATCCTCCAGCATTTCAAACTGCTGAGAGAGAAAGACTCGCAAAAGAAATGGCTGAGGAGGGTTCTAATGACTCTAGTGCTATTGGCAAATTTTCACAAGGACTAAACCCATGCAACAATGTAATGTTTTCTTTAACAGAATTCTCTCTCTCTCTCTCTCTCTCCTTTTTTTCCCTTCTTTTTCTTCTAGGTTTCATCATCAAGAATTATGAATGATTTTCTTACTTCAGAAGGTGCTAATGACTCTAGTGCTATTGGTAAATTTTGGTGAATAAATATTTTTAAAAAGTTTGCTTGAAGAAATTAATTCTATCTCAATAACTTAGCTTTTTAGACTAAGAGTAAATCACTTAAATATGAATTTAAATTTAGATATTTCTTCGTTTTAAAATTGATCGACCATATTTTCGGATTTTTTTTTCTCAAGTAGAACAAGTAGGGTATGGTGATTTTGAACCTCTGTCTCTAAGGACAAGAACACATGTCAATTACCTTGAGCTATGCTCACTTTGGCTTATCCTTGGAAGTTTTAAGACTACAAAGATTGTTATTGGGCTTTATTTTTAAATAAATTGCATCTTATTACTGGTGCCACTAGAAGATATTTAATGGTAGGCTTGTGAACCCACCAAGCAAGGTGCATCAATATCAATTGACCAGTGGGTAAGGCAAGTACTGAGTGAGGTTTGGAGGTGGCACGTGAAGGTCTAAGTTAGAGGGTTGTATTGCAGTTGCACCGAAAGAGAGTTGATTGTCCCCCTATCAAAAGTAAGCAAAGGCAAATTATGTTTACAATCAAGCTGCTAGTGTGAGCTTGACATAAGGGCCAAAAAAGGTTTTTATTTTTATTTTTAATTAAAGTGAATGAGGAAGTGAATGAGGTGCACTACAAACACAAGAGTAGAAACTGAAAATTGGGGTATTACAATTGAATTACATAAAATGAAATGAAAGCTAGTACGAAGTTTCATAATTGTAAATGAACTCACTTTAGTTCTGATCTTCAAAATATGCATGTAATTTGAATCGGTGATGTTATGGAAACATGGTTCTTTGGTTAGATATACTCATTGAGATTCCACCCATTTACATCTCTCTTAAATGTTGTTCTTTTATAGATCGAAAAAGAATTGGACAATTTACATGCAGCAGATGCATCAAAAACTGATAGTTCTAAAGAAGCTGATGCAGCAAAAGGTAAGATGGGTAAGATGCAAAGCTCAACTTCATGATGCGTTGAGAGTTGTTTTCAATTTCATTCATGTATGTAATTTACCAAAGTGATAAAAAAAAAAAAAAAAAAAAAAAAAAACCCAAGCCAAAAGAGTTGCAGAAGACTTCTCCAATTGGACAAAAGTGATTCAATAGATTTACCAATTAAAACGAGGAGTATTTACACCAGGGTAGCTAAGAAAATCATTAAGAAGTGCTGTTGTCTGTTCCTATAATCCGTTTCTCGTTGTCTGAGTGTAAAATGTTACTTGAAAAATTGATAATTCAGGAGCTGCAGATGAGCAAACGGAACTTGATGATGTTGTTAATAAACTTGGAGATGATGGCCTGAGAACCTGTGCTTCAGATGAATCAGAAAGTTGGTCTGATATTGATGATATTGAGGTTTCTTTCTTTCTTCTTTTATTTTATTTTATTAAAGTTCATTTGCTATTAAGATCTGCATAGAAGGTTGGAAAAAAATGTACCATAGTTTATAGACCAAAAAATTAAAACGTAACTACTTTCTAGAGGAATGAGTGTCATTCGTGCCAACTCCCGAGTGCCTGTTTGGGAAAATTGAAGCTTATTATATATTATCCATCGCGCCGACTCAATACCTAGCACTCTATGTGCAATGTAGAAGGAAATGCAAGAAAATCCTGTGGATGCACTATATTGTGATGCTATAGTTTTACTTTACATTTTAATTCTTCATTTGGAAATCAGGTGTATCTATCTATGTTAAGACTTGCCTGCCACTTTCCTGTCAACATTACCTATGATCTTTTATCTTAATTAACTTGATCTATCATTCTTTTAATTTAGATTGGAATACCTTTTTATAATTTTGTAGGGGAAGGGACTTCTTGTCCCTTCGCCCATTGGACTGTTCTGCGTTGGCTGTTTTGGAACGAAAGGTTATCTGTTTCGATCATTCTGTTGTAGTTTCTAGACATTTTCTTTTCAGATTCTGTGGGACAACTTTTTCAGTGCTTGGATTTTTCTGGGTTAAGTCGATACTTGGAAGTTCTGGGGGGCATATAAGGGTTTTGCTTTTTGGTGGATACTTTCTTCCTTATTCCACAAGAATTGAATATTGAGTGCCCACAAGCACACTTGATTATGATGTATACATACCGTTCAATTTTGTGTCCTCTTGAAATAACTGATCTTATATATATTGAATTTTTCAATATTTTTGTCTTCATTATAGACTTAATGGATTAGCACTCAAATGACAATATATTGCATAGGTTGACGGTTATCTTCACAATGAGGAGGAGAAACATTACAAAAAGATAATTTGGGAAGAGATGAACCGGGAGTATCTTGAGGTACATATTTTCATTCATTACAAGCCAATTCGTTGTTGATATCTGTAGACTGTTCATACTTTTTACAGGAACAAGCAGTTAAGGAAGCAGCTGCTGCTGCTGCGAAGAAGGCTTATGAGGCCAATTTCGAAAATTGTTCAGAAGATATGAAGGCTGCAAAGGATCTTGCAGATGCTGCAGCCGCTGCTGTTGCAAAATCTAGAAAGGTTTCTGTCTTTATTTCTCTCACTTTTGCCGTTCACTTGTTCATCTTTGTACTCCTTTTGATTTTTTAATATAGAAGAGGACATTGCATCTTTGTTCCCTTGTCTTAATCTCTTAGCCAGAGTTTTTATTTTGATTCTTGATTCTTATTTGCAGGAAAGACAACGAAAACGAGCTGCAGATGCCAAAAATGTGTCTCCTGCACAAACAGCAGCAGAAGCCACCCGACAAATGTTAAATAAAAAGGTCTTACTTGAAATCATAAATTCATTTTTTAGTTCTTAGATTACAGAACATTGGCAGAGTTTGTTCTGATTTAATTGAAAGTGGTGTTTTCTTTGCTTATTTCTGTGCAGAGACTCAGCTCGAAAATCAACTATGATGTGCTCGACAAACTCTTCGATGAATCTGTATGTTTATATTGCACCTTTTTATTTCACTAATAGTCAAAATATATATATACATACATTTGGTCTGCATTCTTCCAACATGGGCTTTCCACATTATAATTTAATATATTACATAAACAATGAACAAACACGGTAAGAAGAGGGAAACGGGAATAAAACTAAAGAGGAGTTGTGACATTCCTAAGCGTAACTCAACTTGTTTGCAACTTAGCATACATCACTGGTGAAAAACAAAACATCTGCTACCTGGGCGTGACTCAACTTGTTTAGATATATGTTCTTGACCAAGAGGTTCAATTCTGTCCTAGTTACTAATCCTTCTCGAGATTGGCTCTCTTTAGCCTCACCTCTTCCTGTACCTCTAATAGGTAGTCGTCTCCTTCCTCATTTTCCTCTTCCATGGCCTCTGGGCGGCACAAAATATCTACTAACCTGAGCGTAACTCAACTTGTTTAGATATAGTTGATATATGTCTTTGACCAAGAAGTTCAATTCTCTCAACCCCACATGTTAAACTAAAAAGAAAAAAAAGAAAACGAACAAAACCTCCTCTCTAGCGAATTTTGTGAAATAATTATCCAAGCTTACACGACTCCCTCTATCCCAAAAAAAAAAAAAAAAAAAAAAAAAATGGTAACATCTTTTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAATCACCCTTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGTATTTTAAAGCCTTGAGGGGAATCCCGAAAGAGAAAGCCTAAAGAGGATAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATCAGAGCCAGACATCGGACGATGTGCTAGCCTTCTCGCTGTTCCCCGAAGGGGGGTAGACACGGGGCGGTGTGCCAGTAAGGACACTGGCCCCAAAGAGGGGTGGATTTGGTAGTGGTCCCACATCGATTGGAGAAAGGAACGAGTGCCAGCGAAGACGCTAGGCCCCGAAGAGGGGTGGATTGTAATGTCCCATATTGGTTGGGGAGGAGAACAAATCACCCTTTATAAGGTTGTGGAAACGTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAATCCCAAAAGGGAAAGCCCAAAGAGGACAATATTTGCTAGCGGTGGATCTGGGTCGTCACATCTTTGTTCATCATCACCCGAGTAAACGAGGAAATCACAGACTTGCTCTCAAATTTTGAGGTTTTCCTGGACTTACTTTCACCACCATTCCTAGAACTTATTTTGGCATTTGAAATAGGGACATAACACAAAAGGATACTAGGTAAAACAAAATTACTTGTAGTTAACCTTCTTCTTGAGAGTTGAAAGTTGTTTATATCCTATACATATATTTTTTTTTGTGAATTAGGGTAAATATCTTGCATTTGAGGTTTATATAGTGTTCTTATTGCTCTGATTTCCAAACCTGGAACTTTTAGTAAATTCTTCAGTAAAACAAGGCAATTCTCTATTATAATAACTTTCTTGTCATGGCTATGGATTTCTTCATTAATTGATATTGTACTGTGATCTACATTGCAGGCTGGTACAGAGCTTTCGGCGAAGAAGAAACGCACAGAGGAGGCTGGAGAGACCGATAAGACAAAAGATGAAACCAAAGAATTTGAATCCACAGAGTTCAAACATGGTGAACCGGAACAGGAAAATGATTATGATGGTGATGGAACATATGGTTCTGGTCTCTATTATGAGAATATGGAAGAACCATACAGCTATGAACATGATTATGGGTACGACGAATATGATTGATACCGATATCTCAGGCGTTCAAGATGGCGGGCTAGTGTTCGCTGTCGTTAGTTATAGTTGATCTTATATTCATTGGCTGCTATGTGTTCTATCAGATGAACATTAAGCATGCAACTTGCATTATCTTTGATTTTGCTGACCCA

mRNA sequence

ACTGAAATCCATTAACTGAATTCCACCGGCATCGCCCGCCGTTTTGATTTTCTTCTCTTTCGATCGCCCCTCTCACGCCGCCGCCGCCGCCGCCACCGCCGCGCAAACCCCCATCTTCTTATCTCGCGCTCGCTATCTCGCCCGCTGTCGAGGTGATTGTGACACACTGCAACATGGTGTGGTGCAGTAATTGTGTAAAAAATGTTGCTGGGTCTCGAGATAATGCCGGTTTCCAATACTGTGATATGTGTGGGAAGGTGTTGGATTTTTACAATTTCTCTCAGGATCCTACTTTTACAAAGGATTCTGGAGGGCAGAGTCAATTGTCAGGAAATTTTGTTAGATCTATTCAGAGTAATTATTCGGCTTCACGGGAAAGGACATTGAGTAGAGCTTTTGATGATATGAGATATATGAGGAATGGCTTAAACATGGGTGAGAGTGATGAAATAATTCGTGTAGCTGGGGCATTTTATAGAATTGCATTAGAGAGAAATTTTACCCGTGGACGCAATACAGAGTTTGTTCAAGCTGCTTGCCTTTACATTGCTTGTCGGGAAAAGAATAAACCATATCTTCTAATTGACTTTTCAAATTATTTGAGGATAAATGTCTATGTGTTGGGCGCTGTATTTTTGCAACTTTGTAAAGTGCTAAGACTTGAAGAGCACCCTATTGTTCAAAAGCCAGTTGATCCTTCCCTTTTTATCGACAAATTTACTCAATGTTTGCTTGGAGGAACAAAGGACGATGGAATGAAAAAGGAGGTTTCCAGAACTGCATTGAAGATTATAACCAGCATGAAGCGTGATTGGATGCAGACTGGGAGAAAGCCTAGTGGCCTATGTGGTGCGGCTTTATACATATCTGCACTTTCGCATGGTGTCAAGTGTTCCAAGTCTGACATTATAAAGATTGTGCATATTTGTGATGCAACATTGACAAAGCGGTTAATTGAGTTCGAGAATACTGAATCTGGCAGCTTAACGTTGGAGGAATTTATTGTCATGGCAGACAAGGCCAAGGGAAGCAACTCTGAGCGCACTGATGGATCCAATAATGGCTTGAATTCATCGAGTGATGAAGTACTTTGCGTGCATAAGAATGACACCACAAAGCCATATGCTCTTGGCCTTTGTAGAATTTGTTATGATGATTTTGTTGAGCTTTCCGGAGGACTTGATGGGGGAGCAGATCCTCCAGCATTTCAAACTGCTGAGAGAGAAAGACTCGCAAAAGAAATGGCTGAGGAGGGTTCTAATGACTCTAGTGCTATTGGCAAATTTTCACAAGGACTAAACCCATGCAACAATATCGAAAAAGAATTGGACAATTTACATGCAGCAGATGCATCAAAAACTGATAGTTCTAAAGAAGCTGATGCAGCAAAAGGTAAGATGGGAGCTGCAGATGAGCAAACGGAACTTGATGATGTTGTTAATAAACTTGGAGATGATGGCCTGAGAACCTGTGCTTCAGATGAATCAGAAAGTTGGTCTGATATTGATGATATTGAGGTTGACGGTTATCTTCACAATGAGGAGGAGAAACATTACAAAAAGATAATTTGGGAAGAGATGAACCGGGAGTATCTTGAGGAACAAGCAGTTAAGGAAGCAGCTGCTGCTGCTGCGAAGAAGGCTTATGAGGCCAATTTCGAAAATTGTTCAGAAGATATGAAGGCTGCAAAGGATCTTGCAGATGCTGCAGCCGCTGCTGTTGCAAAATCTAGAAAGGAAAGACAACGAAAACGAGCTGCAGATGCCAAAAATGTGTCTCCTGCACAAACAGCAGCAGAAGCCACCCGACAAATGTTAAATAAAAAGAGACTCAGCTCGAAAATCAACTATGATGTGCTCGACAAACTCTTCGATGAATCTGCTGGTACAGAGCTTTCGGCGAAGAAGAAACGCACAGAGGAGGCTGGAGAGACCGATAAGACAAAAGATGAAACCAAAGAATTTGAATCCACAGAGTTCAAACATGGTGAACCGGAACAGGAAAATGATTATGATGGTGATGGAACATATGGTTCTGGTCTCTATTATGAGAATATGGAAGAACCATACAGCTATGAACATGATTATGGGTACGACGAATATGATTGATACCGATATCTCAGGCGTTCAAGATGGCGGGCTAGTGTTCGCTGTCGTTAGTTATAGTTGATCTTATATTCATTGGCTGCTATGTGTTCTATCAGATGAACATTAAGCATGCAACTTGCATTATCTTTGATTTTGCTGACCCA

Coding sequence (CDS)

ATGGTGTGGTGCAGTAATTGTGTAAAAAATGTTGCTGGGTCTCGAGATAATGCCGGTTTCCAATACTGTGATATGTGTGGGAAGGTGTTGGATTTTTACAATTTCTCTCAGGATCCTACTTTTACAAAGGATTCTGGAGGGCAGAGTCAATTGTCAGGAAATTTTGTTAGATCTATTCAGAGTAATTATTCGGCTTCACGGGAAAGGACATTGAGTAGAGCTTTTGATGATATGAGATATATGAGGAATGGCTTAAACATGGGTGAGAGTGATGAAATAATTCGTGTAGCTGGGGCATTTTATAGAATTGCATTAGAGAGAAATTTTACCCGTGGACGCAATACAGAGTTTGTTCAAGCTGCTTGCCTTTACATTGCTTGTCGGGAAAAGAATAAACCATATCTTCTAATTGACTTTTCAAATTATTTGAGGATAAATGTCTATGTGTTGGGCGCTGTATTTTTGCAACTTTGTAAAGTGCTAAGACTTGAAGAGCACCCTATTGTTCAAAAGCCAGTTGATCCTTCCCTTTTTATCGACAAATTTACTCAATGTTTGCTTGGAGGAACAAAGGACGATGGAATGAAAAAGGAGGTTTCCAGAACTGCATTGAAGATTATAACCAGCATGAAGCGTGATTGGATGCAGACTGGGAGAAAGCCTAGTGGCCTATGTGGTGCGGCTTTATACATATCTGCACTTTCGCATGGTGTCAAGTGTTCCAAGTCTGACATTATAAAGATTGTGCATATTTGTGATGCAACATTGACAAAGCGGTTAATTGAGTTCGAGAATACTGAATCTGGCAGCTTAACGTTGGAGGAATTTATTGTCATGGCAGACAAGGCCAAGGGAAGCAACTCTGAGCGCACTGATGGATCCAATAATGGCTTGAATTCATCGAGTGATGAAGTACTTTGCGTGCATAAGAATGACACCACAAAGCCATATGCTCTTGGCCTTTGTAGAATTTGTTATGATGATTTTGTTGAGCTTTCCGGAGGACTTGATGGGGGAGCAGATCCTCCAGCATTTCAAACTGCTGAGAGAGAAAGACTCGCAAAAGAAATGGCTGAGGAGGGTTCTAATGACTCTAGTGCTATTGGCAAATTTTCACAAGGACTAAACCCATGCAACAATATCGAAAAAGAATTGGACAATTTACATGCAGCAGATGCATCAAAAACTGATAGTTCTAAAGAAGCTGATGCAGCAAAAGGTAAGATGGGAGCTGCAGATGAGCAAACGGAACTTGATGATGTTGTTAATAAACTTGGAGATGATGGCCTGAGAACCTGTGCTTCAGATGAATCAGAAAGTTGGTCTGATATTGATGATATTGAGGTTGACGGTTATCTTCACAATGAGGAGGAGAAACATTACAAAAAGATAATTTGGGAAGAGATGAACCGGGAGTATCTTGAGGAACAAGCAGTTAAGGAAGCAGCTGCTGCTGCTGCGAAGAAGGCTTATGAGGCCAATTTCGAAAATTGTTCAGAAGATATGAAGGCTGCAAAGGATCTTGCAGATGCTGCAGCCGCTGCTGTTGCAAAATCTAGAAAGGAAAGACAACGAAAACGAGCTGCAGATGCCAAAAATGTGTCTCCTGCACAAACAGCAGCAGAAGCCACCCGACAAATGTTAAATAAAAAGAGACTCAGCTCGAAAATCAACTATGATGTGCTCGACAAACTCTTCGATGAATCTGCTGGTACAGAGCTTTCGGCGAAGAAGAAACGCACAGAGGAGGCTGGAGAGACCGATAAGACAAAAGATGAAACCAAAGAATTTGAATCCACAGAGTTCAAACATGGTGAACCGGAACAGGAAAATGATTATGATGGTGATGGAACATATGGTTCTGGTCTCTATTATGAGAATATGGAAGAACCATACAGCTATGAACATGATTATGGGTACGACGAATATGATTGA

Protein sequence

MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQSNYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQAACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIDKFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKCSKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNSSSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAKGKMGAADEQTELDDVVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFESTEFKHGEPEQENDYDGDGTYGSGLYYENMEEPYSYEHDYGYDEYD

Homology

[Close]

BLAST of CmoCh10G011950 vs. ExPASy Swiss-Prot
Match: Q92994 (Transcription factor IIIB 90 kDa subunit OS=Homo sapiens OX=9606 GN=BRF1 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.1e-50
Identity = 171/588 (29.08%), Postives = 263/588 (44.73%), Query Frame = 0


Query: 19  GFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVR--------SIQSNY-----SA 78
           G   C  CG VL+      +  F + SGG S   G FV         ++   +       
Sbjct: 21  GDAVCTACGSVLEDNIIVSEVQFVESSGGGSSAVGQFVSLDGAGKTPTLGGGFHVNLGKE 80

Query: 79  SRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQAACLYI 138
           SR +TL      + ++ N L + +    +  A  F+++A+ R+ TRGR    V AACLY+
Sbjct: 81  SRAQTLQNGRRHIHHLGNQLQLNQ--HCLDTAFNFFKMAVSRHLTRGRKMAHVIAACLYL 140

Query: 139 ACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIDKFTQC 198
            CR +  P++L+D S+ L++NVYVLG  FL L + L +         +DP L+I +F   
Sbjct: 141 VCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCIN-----APAIDPCLYIPRFAHL 200

Query: 199 LLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKCSKSDI 258
           L  G K+     EVS TAL+++  MKRDWM TGR+PSGLCGAAL ++A  H  + +  ++
Sbjct: 201 LEFGEKN----HEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEV 260

Query: 259 IKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNSSSDEV 318
           I +V +C++TL KRL EFE+T +  LT++EF+ +  + +      T G         ++V
Sbjct: 261 ISVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQV 320

Query: 319 LCVHKNDTTKPYALGLCRICYDDFVEL---------SGGLDGGADPPAFQTAERERLAKE 378
           L     +     +       Y D +E+          GGL   A   + +        +E
Sbjct: 321 LSKKLEEVEGEIS------SYQDAIEIELENSRPKAKGGLASLAKDGSTEDTASSLCGEE 380

Query: 379 MAEEGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAKGKMGAADEQT 438
             E+   +++A           +++ K+L       A  +  +  +    G+  A     
Sbjct: 381 DTEDEELEAAA-----------SHLNKDLYRELLGGAPGSSEAAGSPEWGGRPPALGSLL 440

Query: 439 ELDDVVNKLG-DDGLRTCASDESESWSD-----------IDDIEVDGYLHNEEEKHYKKI 498
           +       LG  D +R C S +S    D           IDD+E+D Y+ NE E   K  
Sbjct: 441 DPLPTAASLGISDSIRECISSQSSDPKDASGDGELDLSGIDDLEIDRYILNESEARVKAE 500

Query: 499 IWEEMNREYLEEQAVKEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQ 558
           +W   N EYL EQ  KEA  A  K+                               KE +
Sbjct: 501 LWMRENAEYLREQREKEARIAKEKE---------------------------LGIYKEHK 553

Query: 559 RKRAADAKNVSPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGT 573
            K++   +    A TA EA  +ML +K++SSKINY VL  L     G+
Sbjct: 561 PKKSCKRREPIQASTAREAIEKMLEQKKISSKINYSVLRGLSSAGGGS 553

[Close]

BLAST of CmoCh10G011950 vs. ExPASy Swiss-Prot
Match: Q8CFK2 (Transcription factor IIIB 90 kDa subunit OS=Mus musculus OX=10090 GN=Brf1 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.8e-48
Identity = 166/587 (28.28%), Postives = 265/587 (45.14%), Query Frame = 0


Query: 19  GFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVR--------SIQSNY-----SA 78
           G   C  CG VL+      +  F ++SGG S   G FV         ++   +       
Sbjct: 21  GDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVSLDGAGKTPTLGGGFHVNLGKE 80

Query: 79  SRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQAACLYI 138
           SR +TL      + ++ + L + +    +  A  F+++A+ ++ TRGR    V AACLY+
Sbjct: 81  SRAQTLQNGRRHIHHLGSQLQLNQ--HCLDTAFNFFKMAVSKHLTRGRKMAHVIAACLYL 140

Query: 139 ACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIDKFTQC 198
            CR +  P++L+D S+ L++NVYVLG  FL L + L +         +DP L+I +F   
Sbjct: 141 VCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCIN-----APAIDPCLYIPRFAHL 200

Query: 199 LLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKCSKSDI 258
           L  G K+     EVS TAL+++  MKRDWM TGR+PSGLCGAAL ++A  H  + +  ++
Sbjct: 201 LEFGEKN----HEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEV 260

Query: 259 IKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNSSSDEV 318
           I +V +C++TL KRL EFE+T +  LT++EF+ +  + +      T G         ++V
Sbjct: 261 ISVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQV 320

Query: 319 LCVHKNDTTKPYALGLCRICYDDFVEL---------SGGLDGGADPPAFQTAERERLAKE 378
           L     +     +       Y D +E+          G L   +   + + A      +E
Sbjct: 321 LSKKLEEVEGEIS------SYQDAIEIELENSRPKAKGALANLSKDGSGEDATSSPRCEE 380

Query: 379 MAEEGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAKGKMGAADEQT 438
             E+   +++A           +++ K+       D   ++++ + D     +       
Sbjct: 381 DTEDEELEAAA-----------SHMNKDFYRELLGDDDGSEAAGDPDGGSRPLALESLLG 440

Query: 439 ELDDVVNKLGDDGLRTCAS----DESESWSD-------IDDIEVDGYLHNEEEKHYKKII 498
            L    +    D +R C S    D  +S  D       IDD+E+D Y+ NE E   K  +
Sbjct: 441 PLPTAASLGISDSIRECISSPSGDPKDSSGDGELDLSGIDDLEIDRYILNESEARVKAEL 500

Query: 499 WEEMNREYLEEQAVKEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQR 558
           W   N EYL EQ  KEA  A  K+                               KE + 
Sbjct: 501 WMRENAEYLREQKEKEARIAKEKE---------------------------LGIYKEHKP 552

Query: 559 KRAADAKNVSPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGT 573
           K++   +    A TA EA  +ML +K++SSKINY VL  L  +  G+
Sbjct: 561 KKSCKRREPILASTAGEAIEKMLEQKKISSKINYSVLRDLNSKGGGS 552

[Close]

BLAST of CmoCh10G011950 vs. ExPASy Swiss-Prot
Match: Q9P6R0 (Transcription factor IIIB 60 kDa subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=brf1 PE=1 SV=2)

HSP 1 Score: 193.4 bits (490), Expect = 8.2e-48
Identity = 159/586 (27.13%), Postives = 267/586 (45.56%), Query Frame = 0


Query: 4   CSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQS-- 63
           C NC      S   +G  YC  CG V++      + TF + S G + + G+ V + Q+  
Sbjct: 3   CPNCGSTTFESDTASGNTYCTQCGVVVEQDAIVSEVTFGEASTGAAVVQGSLVSNDQTHA 62

Query: 64  --------NYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGR 123
                   N  +   R L+ A    R     + +  ++  I  A  ++ +A+  NF +GR
Sbjct: 63  RTFGGPYRNQGSVESRELTIANGRRRISALAIALKLNERHIEAAVRYFTLAINNNFIKGR 122

Query: 124 NTEFVQAACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPV 183
            +++V A+CLYI CR     ++LIDFS+ L+INV+ LG+ FL+LC+VLR    P+    +
Sbjct: 123 RSQYVVASCLYIVCRISKTSHMLIDFSDILQINVFKLGSTFLKLCRVLR-PNLPL----L 182

Query: 184 DPSLFIDKFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISA 243
           DPSL+I +F   L  G +       V+  A++++  M RDWMQ GR+P+G+CGA L I+A
Sbjct: 183 DPSLYISRFASLLEFGPE----THRVANDAIRLVARMNRDWMQIGRRPAGICGACLLIAA 242

Query: 244 LSHGVKCSKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDG 303
             +  + S  +++ +V + D T+ KRL EF+ TESG L++ +F                 
Sbjct: 243 RMNNFRRSVREVVHVVKVADITIQKRLDEFKLTESGDLSIADF----------------- 302

Query: 304 SNNGLNSSSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERL 363
                                                  +  L+G +DPP+F   ++   
Sbjct: 303 --------------------------------------RNIWLEGQSDPPSFTKNQK--- 362

Query: 364 AKEMAEEGSNDSSAIGKFSQGLNPCNNIE----KELDNLHAADASKTDSSKEADAAKGKM 423
                + G+   S I    + ++P          E+ +   +   K +S +     K   
Sbjct: 363 ---FQQYGAQKVSNIDHTQEYMSPIKRTPDFDGNEVKSEELSQTVKVESQETPVHLK--- 422

Query: 424 GAADEQTELDDVVNKLGDDGLRTCA-------SDESESWSDIDDIEVDGYLHNEEEKHYK 483
             ADE+    +V   L  D LR  +       S+E  +  D+DD E++  L +++E   K
Sbjct: 423 --ADEREIRKEVTETLKGDELRKISLQVNVKFSEEEVTLEDVDDDEIEDILLDKDEILTK 482

Query: 484 KIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKE 543
             +W E+N++YL E+  K                    ++K  +DL       + +  ++
Sbjct: 483 TQVWMELNKDYLAEEEAK--------------------NLKLQEDL----KKGIVRQPRK 489

Query: 544 RQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDE 569
           R+R R  D+ +   A TAAE+ ++M+ ++  S KINY+ LD LFDE
Sbjct: 543 RRRYRPRDSTSDGIADTAAESAKEMMQQRAFSKKINYEALDMLFDE 489

[Close]

BLAST of CmoCh10G011950 vs. ExPASy Swiss-Prot
Match: P46070 (Transcription factor IIIB 70 kDa subunit OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=TDS4 PE=3 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 1.5e-41
Identity = 167/599 (27.88%), Postives = 279/599 (46.58%), Query Frame = 0


Query: 4   CSNC-----VKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRS 63
           C NC     V++++ + +      C +CG V +  +   + TF + S G + + G FV +
Sbjct: 12  CKNCGSTDFVRDISNTTNEL---ICKVCGLVTEENSIVSEVTFGEASNGAAVIQGAFVSA 71

Query: 64  IQS----------NYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERN 123
            Q+          N   SRE TL+ A   ++ +   LN+ E   +   A  +YR+AL  N
Sbjct: 72  NQAHPTFMSHSGQNALMSRETTLNNARRKLKAVSYALNIPE--YVTDAAFQWYRLALSNN 131

Query: 124 FTRGRNTEFVQAACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPI 183
           F +GR ++ V AACLYIACR++   ++LIDFS+ L+++VY +GA FL+L K L++ + P+
Sbjct: 132 FVQGRKSQNVIAACLYIACRKERTHHMLIDFSSRLQVSVYSIGATFLKLAKKLQIVKLPL 191

Query: 184 VQKPVDPSLFIDKFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAA 243
                DPSLFI  F + L  G K    K +V R A+K+  +M RDWM  GR+P+G+ GA 
Sbjct: 192 ----ADPSLFIQHFAEKLELGDK----KIKVIRDAVKLAQTMSRDWMYEGRRPAGIAGAC 251

Query: 244 LYISALSHGVKCSKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNS 303
           L ++   + ++ + S+I+ I H+ + TL +RL EF+NT S  L+++EF            
Sbjct: 252 LLLACRMNNLRRTHSEIVAISHVAEETLQQRLNEFKNTTSAKLSVKEF----------RD 311

Query: 304 ERTDGSNNGLNSSSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTA 363
           + T+  N G  S+  +     KN   +               ++   LD         T 
Sbjct: 312 DETE-VNEGERSAESKPPSFDKNRLKEK--------------KIKDSLD---------TK 371

Query: 364 ERERLAKEMAEEGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAKGK 423
           E    ++E        +  +G             K+L     A+ S+  ++   D     
Sbjct: 372 EMLETSEEAVSRNPILTQVLGAQELSSKEVLYYLKKLSERRKAEFSRIKATHGIDGEDLH 431

Query: 424 MGAADEQTELDDVVN-KLGDD--------------GLRTCASDESESWSDIDDIEVDGYL 483
               D++  LD++    L  D               L +  SD  E+  D+DD E+D +L
Sbjct: 432 KTEKDKKRSLDEIDGYSLEKDPYRPRNLHLLPTTASLLSKVSDHPENLDDVDDAELDSHL 491

Query: 484 HNEEEKHYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFENCSEDMKAAKDLADAAA 543
            +EE    K+ IW ++N +YL EQ  K       ++A  A+        ++ +   + ++
Sbjct: 492 LDEEASKLKERIWIDINGDYLIEQESKR----LKQEADLASGNTSLRKKRSKRTNRNQSS 551

Query: 544 AAVAKSRKERQRKRA----ADAKNVSPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDE 569
           A++ K + +          ADA +V     AA   + +L K   S KINYD ++ LF +
Sbjct: 552 ASIVKVQVDGLPLDVSVDDADAVDV----VAAGGVKNLLQKTTFSKKINYDAINGLFGQ 555

[Close]

BLAST of CmoCh10G011950 vs. ExPASy Swiss-Prot
Match: P29056 (Transcription factor IIIB 70 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BRF1 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.5e-38
Identity = 161/592 (27.20%), Postives = 277/592 (46.79%), Query Frame = 0


Query: 23  CDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQSNYS-------ASRERTLSRAF 82
           C  CG V +      + TF + S G + + G+F+ + QS+ +        SRE TL+ A 
Sbjct: 25  CKACGVVSEDNPIVSEVTFGETSAGAAVVQGSFIGAGQSHAAFGGSSALESREATLNNAR 84

Query: 83  DDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQAACLYIACREKNKPYL 142
             +R +   L++ E   I   A  +Y++AL  NF +GR ++ V A+CLY+ACR++   ++
Sbjct: 85  RKLRAVSYALHIPE--YITDAAFQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHM 144

Query: 143 LIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIDKFTQCLLGGTKDDGM 202
           LIDFS+ L+++VY +GA FL++ K L + E P+     DPSLFI  F + L    K    
Sbjct: 145 LIDFSSRLQVSVYSIGATFLKMVKKLHITELPL----ADPSLFIQHFAEKLDLADK---- 204

Query: 203 KKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKCSKSDIIKIVHICDAT 262
           K +V + A+K+   M +DWM  GR+P+G+ GA + ++   + ++ + ++I+ + H+ + T
Sbjct: 205 KIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRTHTEIVAVSHVAEET 264

Query: 263 LTKRLIEFENTESGSLTLEEF------------------IVMADKAKGS--NSERTDGSN 322
           L +RL EF+NT++  L++++F                       K K S    E    S 
Sbjct: 265 LQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKIKDSLDKEEMFQTSE 324

Query: 323 NGLNS-------------SSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADP 382
             LN              SS EVL   K  + +       R    + ++ + G+DG  + 
Sbjct: 325 EALNKNPILTQVLGEQELSSKEVLFYLKQFSER-------RARVVERIKATNGIDG--EN 384

Query: 383 PAFQTAERERLAKEMAEEGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEA 442
              + +E E   ++++E    +    G+  +       + K++    + +  + +S    
Sbjct: 385 IYHEGSENETRKRKLSEVSIQNEHVEGEDKETEGTEEKV-KKVKTKTSEEKKENESGHFQ 444

Query: 443 DAAKGKMGAADEQTELDDVVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYK 502
           DA  G     D     +  +    D  L +  SD+ ++  D+DD E++ +L NEE    K
Sbjct: 445 DAIDGYSLETDPYCPRNLHLLPTTDTYL-SKVSDDPDNLEDVDDEELNAHLLNEEASKLK 504

Query: 503 KIIWEEMNREYLEEQAVKE-------AAAAAAKKAYEANFENCSEDMKAAKDLADAAAAA 562
           + IW  +N ++L EQ  K        A    + K       N +   +  K +  AAA  
Sbjct: 505 ERIWIGLNADFLLEQESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAAAIG 564

Query: 563 VAKSRKERQRKRAA-DAKNVSPAQTAAEATRQMLNKKRLSSKINYDVLDKLF 567
           +    +++    AA  A   S   T A++ + ML K   S KINYD +D LF
Sbjct: 565 LMSDLQDKSGLHAALKAAEESGDFTTADSVKNMLQKASFSKKINYDAIDGLF 595

[Close]

BLAST of CmoCh10G011950 vs. ExPASy TrEMBL
Match: A0A6J1HAL7 (transcription factor IIIB 60 kDa subunit-like OS=Cucurbita moschata OX=3662 GN=LOC111462077 PE=3 SV=1)

HSP 1 Score: 1241.5 bits (3211), Expect = 0.0e+00
Identity = 641/644 (99.53%), Postives = 641/644 (99.53%), Query Frame = 0


Query: 1   MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ 60
           MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ
Sbjct: 1   MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ 60

Query: 61  SNYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQA 120
           SNYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQA
Sbjct: 61  SNYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQA 120

Query: 121 ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID 180
           ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID
Sbjct: 121 ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID 180

Query: 181 KFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKC 240
           KFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKC
Sbjct: 181 KFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKC 240

Query: 241 SKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNS 300
           SKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNS
Sbjct: 241 SKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNS 300

Query: 301 SSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEE 360
           SSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEE
Sbjct: 301 SSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEE 360

Query: 361 GSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAKGKMGAADEQTELDD 420
           GSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAK   GAADEQTELDD
Sbjct: 361 GSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAK---GAADEQTELDD 420

Query: 421 VVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVK 480
           VVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVK
Sbjct: 421 VVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVK 480

Query: 481 EAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTA 540
           EAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTA
Sbjct: 481 EAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTA 540

Query: 541 AEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFEST 600
           AEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFEST
Sbjct: 541 AEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFEST 600

Query: 601 EFKHGEPEQENDYDGDGTYGSGLYYENMEEPYSYEHDYGYDEYD 645
           EFKHGEPEQENDYDGDGTYGSGLYYENMEEPYSYEHDYGYDEYD
Sbjct: 601 EFKHGEPEQENDYDGDGTYGSGLYYENMEEPYSYEHDYGYDEYD 641

[Close]

BLAST of CmoCh10G011950 vs. ExPASy TrEMBL
Match: A0A6J1HVK9 (transcription factor IIIB 60 kDa subunit-like OS=Cucurbita maxima OX=3661 GN=LOC111467855 PE=3 SV=1)

HSP 1 Score: 1220.3 bits (3156), Expect = 0.0e+00
Identity = 631/644 (97.98%), Postives = 634/644 (98.45%), Query Frame = 0


Query: 1   MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ 60
           MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ
Sbjct: 1   MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ 60

Query: 61  SNYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQA 120
           SNYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQA
Sbjct: 61  SNYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQA 120

Query: 121 ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID 180
           ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID
Sbjct: 121 ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID 180

Query: 181 KFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKC 240
           KFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKC
Sbjct: 181 KFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKC 240

Query: 241 SKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNS 300
           SKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNS
Sbjct: 241 SKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNS 300

Query: 301 SSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEE 360
           SSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEE
Sbjct: 301 SSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEE 360

Query: 361 GSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAKGKMGAADEQTELDD 420
           GSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKT SSKEA+AAKG   A DEQ ELDD
Sbjct: 361 GSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTVSSKEAEAAKG--AAGDEQRELDD 420

Query: 421 VVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVK 480
            VNKLGDD LRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVK
Sbjct: 421 GVNKLGDDALRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVK 480

Query: 481 EAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTA 540
           EAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAA+AKNVSPAQTA
Sbjct: 481 EAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAAEAKNVSPAQTA 540

Query: 541 AEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFEST 600
           AEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKR E+AGETDKTKDETKEFEST
Sbjct: 541 AEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRAEQAGETDKTKDETKEFEST 600

Query: 601 EFKHGEPEQENDYDGDGTYGSGLYYENMEEPYSYEHDYGYDEYD 645
           EFKHGE EQENDYDGDGTYGSGLYYENMEEPYSYEHDYGYDEYD
Sbjct: 601 EFKHGEQEQENDYDGDGTYGSGLYYENMEEPYSYEHDYGYDEYD 642

[Close]

BLAST of CmoCh10G011950 vs. ExPASy TrEMBL
Match: A0A0A0LZ47 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G572430 PE=3 SV=1)

HSP 1 Score: 1041.2 bits (2691), Expect = 1.8e-300
Identity = 548/646 (84.83%), Postives = 586/646 (90.71%), Query Frame = 0


Query: 1   MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ 60
           MVWCSNCVKNVAGSRD AGF YCDMCGKVLD YNFSQ+PTFTKDSGGQSQLSGNFVRSIQ
Sbjct: 105 MVWCSNCVKNVAGSRDEAGFLYCDMCGKVLDSYNFSQEPTFTKDSGGQSQLSGNFVRSIQ 164

Query: 61  SNYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQA 120
           SNYSASRERTL++AF+DMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRN EFVQA
Sbjct: 165 SNYSASRERTLNKAFEDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNAEFVQA 224

Query: 121 ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID 180
           ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID
Sbjct: 225 ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID 284

Query: 181 KFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKC 240
           KFTQCLLGGTKDDGMKKEVS+TALKIITSMKRDWMQTGRKPSGLCGAALYISALS+GVKC
Sbjct: 285 KFTQCLLGGTKDDGMKKEVSKTALKIITSMKRDWMQTGRKPSGLCGAALYISALSNGVKC 344

Query: 241 SKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNS 300
           +KSDIIKIVHICDATLTKRLIEFENTESGSLT+EEFIVMADK KGSNS     +NNG ++
Sbjct: 345 TKSDIIKIVHICDATLTKRLIEFENTESGSLTMEEFIVMADKLKGSNSY----TNNGSSA 404

Query: 301 SSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEE 360
            SDEVLCVHKN+  KPYALGLCR CYDDFVELSGGLDGG++PPAFQ+AE+ER+ K   EE
Sbjct: 405 LSDEVLCVHKNECQKPYALGLCRSCYDDFVELSGGLDGGSNPPAFQSAEKERMEKATVEE 464

Query: 361 GSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAKGKMGAADEQTELDD 420
           GS+D SAIGKFSQGL PCNN EKE DN+H  DAS+T S KEA+A     G ADEQ   DD
Sbjct: 465 GSDDCSAIGKFSQGLKPCNNTEKESDNVH-VDASETASFKEAEA----KGTADEQRGPDD 524

Query: 421 VVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVK 480
            VNK+G D L TCASD+SE+WSDIDD+EVDGYLHNEEEKHYKKIIWEEMNREYLEEQA K
Sbjct: 525 DVNKVGADDLGTCASDDSENWSDIDDVEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAK 584

Query: 481 EAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTA 540
           +AAAAAAKKAYEANF+NCSED+KAAKDLA+AAAAAVAKSRKERQRKRAA+AKN +PAQTA
Sbjct: 585 DAAAAAAKKAYEANFQNCSEDLKAAKDLAEAAAAAVAKSRKERQRKRAAEAKNATPAQTA 644

Query: 541 AEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFEST 600
           AEATRQMLNKKRLSSKINYDVLDKLFDESAG E SAKKK  E+A ET+KT++ TKEFE+T
Sbjct: 645 AEATRQMLNKKRLSSKINYDVLDKLFDESAGMEPSAKKKCEEQAEETEKTRNTTKEFETT 704

Query: 601 EFKHGEPEQENDYDG--DGTYGSGLYYENMEEPYSYEHDYGYDEYD 645
           E      EQE DYD   DGTYGSGLYYENMEE Y++E DYGYDEYD
Sbjct: 705 E------EQEEDYDDGYDGTYGSGLYYENMEETYNHEQDYGYDEYD 735

[Close]

BLAST of CmoCh10G011950 vs. ExPASy TrEMBL
Match: A0A6J1F4S8 (transcription factor IIIB 60 kDa subunit-like OS=Cucurbita moschata OX=3662 GN=LOC111440829 PE=3 SV=1)

HSP 1 Score: 1039.6 bits (2687), Expect = 5.3e-300
Identity = 545/646 (84.37%), Postives = 577/646 (89.32%), Query Frame = 0


Query: 1   MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ 60
           MVWCSNCVK+VAGSRD AGF YCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ
Sbjct: 1   MVWCSNCVKSVAGSRDEAGFLYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ 60

Query: 61  SNYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQA 120
           SN+SASRERTL+RAF+DMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQA
Sbjct: 61  SNFSASRERTLNRAFEDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQA 120

Query: 121 ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID 180
           ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID
Sbjct: 121 ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID 180

Query: 181 KFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKC 240
           K+TQCLLGG KDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHG KC
Sbjct: 181 KYTQCLLGGMKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGAKC 240

Query: 241 SKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNS--ERTDGSNNGL 300
           +KSDIIKIVHICDATLTKRL+EFENTESGSLT+EEFIVMADK KGSNS  ERTDGS NGL
Sbjct: 241 TKSDIIKIVHICDATLTKRLVEFENTESGSLTMEEFIVMADKVKGSNSSTERTDGSKNGL 300

Query: 301 NSSSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMA 360
           N+S DEVLCVHKND  KPYALGLC+ CYDDFVELSGGLDGG++PPAFQ AERER+AK M 
Sbjct: 301 NTSGDEVLCVHKNDCKKPYALGLCKSCYDDFVELSGGLDGGSNPPAFQCAERERMAKTMV 360

Query: 361 EEGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAKGKMGAADEQTEL 420
           EEG+NDSSA GK  +GLNPCNN +KELD  H ADASKT  S E    KG       Q  L
Sbjct: 361 EEGANDSSATGKLPRGLNPCNNTDKELDGAH-ADASKTVPSTEEAERKG------AQRGL 420

Query: 421 DDVVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQA 480
           DD             ASDESE+WSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQA
Sbjct: 421 DD-------------ASDESENWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQA 480

Query: 481 VKEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQ 540
            K+AAAAAAK AYEANF+NCS D+KAAKDLADAAAAAVAKSRKERQRKRAA+AKN SPAQ
Sbjct: 481 AKDAAAAAAKNAYEANFQNCSADLKAAKDLADAAAAAVAKSRKERQRKRAAEAKNASPAQ 540

Query: 541 TAAEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFE 600
           TAAEATR+MLNKKRLSSKINYDVL+KLFDES GTE  +KKKR E+ G+TDK ++ TKEFE
Sbjct: 541 TAAEATRKMLNKKRLSSKINYDVLEKLFDESGGTEPLSKKKREEQTGQTDKAQNMTKEFE 600

Query: 601 STEFKHGEPEQENDYDGDGTYGSGLYYENMEEPYSYEHDYGYDEYD 645
           STE K  E EQE+DYDG+GTYGSGLYYENM+E  +YE DYGYDEYD
Sbjct: 601 STEHKESELEQEDDYDGEGTYGSGLYYENMDEAQNYEQDYGYDEYD 626

[Close]

BLAST of CmoCh10G011950 vs. ExPASy TrEMBL
Match: A0A1S3BQV3 (transcription factor IIIB 60 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103492209 PE=3 SV=1)

HSP 1 Score: 1038.1 bits (2683), Expect = 1.5e-299
Identity = 548/646 (84.83%), Postives = 587/646 (90.87%), Query Frame = 0


Query: 1   MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ 60
           MVWCSNCVKNVAGSRD AGF YCDMCGKVLD YNFSQDPTFTKDSGGQSQLSGNFVRSIQ
Sbjct: 1   MVWCSNCVKNVAGSRDEAGFLYCDMCGKVLDSYNFSQDPTFTKDSGGQSQLSGNFVRSIQ 60

Query: 61  SNYSASRERTLSRAFDDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNTEFVQA 120
           SNYSASRERTL++AF+DMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRN EFVQA
Sbjct: 61  SNYSASRERTLNKAFEDMRYMRNGLNMGESDEIIRVAGAFYRIALERNFTRGRNAEFVQA 120

Query: 121 ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID 180
           ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID
Sbjct: 121 ACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFID 180

Query: 181 KFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVKC 240
           KFTQCLLGGTKDDGMKKEVS+TALKIITSMKRDWMQTGRKPSGLCGAALYISALS+GVKC
Sbjct: 181 KFTQCLLGGTKDDGMKKEVSKTALKIITSMKRDWMQTGRKPSGLCGAALYISALSNGVKC 240

Query: 241 SKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLNS 300
           +KSDIIKIVHICDATLTKRLIEFENTESGSLT+EEFIVMADK KGSNS     +NNG N+
Sbjct: 241 TKSDIIKIVHICDATLTKRLIEFENTESGSLTMEEFIVMADKVKGSNSY----TNNGSNA 300

Query: 301 SSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAEE 360
           SSDEVLCVHKN+  KPYALGLCR CYDDFVELSGGLDGG++PPAFQ+AE+ER+ K   EE
Sbjct: 301 SSDEVLCVHKNECKKPYALGLCRSCYDDFVELSGGLDGGSNPPAFQSAEKERMEKAAVEE 360

Query: 361 GSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAKGKMGAADEQTELDD 420
           GS+D SAIGKFSQGL PCNN EKE DN+H ADAS+T S KEA+      GAADEQ E D+
Sbjct: 361 GSDDCSAIGKFSQGLKPCNNTEKESDNVH-ADASETASFKEAEV----KGAADEQREPDN 420

Query: 421 VVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAVK 480
             NK+G DGL T ASD+SE+WSDIDD+EVDGYLHNEEEKHYKKIIWEEMNREYLEEQA K
Sbjct: 421 GANKVGADGLETSASDDSENWSDIDDVEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAAK 480

Query: 481 EAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQTA 540
           +AAAAAAKKAYEANF+NCSED+KAAKDLA+AAAAAVAKSRKERQ+KRAA+AKN +PAQTA
Sbjct: 481 DAAAAAAKKAYEANFQNCSEDLKAAKDLAEAAAAAVAKSRKERQQKRAAEAKNATPAQTA 540

Query: 541 AEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKD-ETKEFES 600
           AEATRQMLNKKRLSSKINYDVLDKLFDESAG E S KKK  E+A ETDK ++  TKEFE+
Sbjct: 541 AEATRQMLNKKRLSSKINYDVLDKLFDESAGMEPSTKKKCEEQAEETDKPRNTTTKEFET 600

Query: 601 TEFKHGEPEQENDY-DGDGTYGSGLYYENMEEPYSYEHDYGYDEYD 645
           TE      EQ++DY DG GTYGSGLYYENMEE Y++E DYGYDEYD
Sbjct: 601 TE------EQDDDYDDGYGTYGSGLYYENMEETYNHEQDYGYDEYD 631

[Close]

BLAST of CmoCh10G011950 vs. TAIR 10
Match: AT3G09360.1 (Cyclin/Brf1-like TBP-binding protein )

HSP 1 Score: 503.8 bits (1296), Expect = 2.0e-142
Identity = 303/651 (46.54%), Postives = 422/651 (64.82%), Query Frame = 0


Query: 1   MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ 60
           MVWC++CVKNV G R   G   C++CG++L+ ++FS + TF K++ GQSQ SGN VRS+Q
Sbjct: 1   MVWCNHCVKNVPGIRPYDGALACNLCGRILENFHFSTEVTFVKNAAGQSQASGNIVRSVQ 60

Query: 61  SNYSASRERTLSRAFDDMRYMRNGLNMG-ESDEIIRVAGAFYRIALERNFTRGRNTEFVQ 120
           S  ++SRER    A D++  +++ L +G E D++I +A  F+ +A+E+NFT+GR TE VQ
Sbjct: 61  SGITSSRERRFRIARDELMNLKDALGIGDERDDVIVIAAKFFEMAVEQNFTKGRRTELVQ 120

Query: 121 AACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFI 180
           A+CLY+ CRE N   LLIDFS+YLR++VY LG+V+LQLC++L L E+   +K VDPS+F+
Sbjct: 121 ASCLYLTCRELNIALLLIDFSSYLRVSVYELGSVYLQLCEMLYLVENRNYEKLVDPSIFM 180

Query: 181 DKFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVK 240
           D+F+  LL G  +    K+V  TA  II SMKRDW+QTGRKPSG+CGAALY +ALSHG+K
Sbjct: 181 DRFSNSLLKGKNN----KDVVATARDIIASMKRDWIQTGRKPSGICGAALYTAALSHGIK 240

Query: 241 CSKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLN 300
           CSK+DI+ IVHIC+ATLTKRLIEF +T+SG+L + E        +    + T        
Sbjct: 241 CSKTDIVNIVHICEATLTKRLIEFGDTDSGNLNVNELRERESHKRSFTMKPT-------- 300

Query: 301 SSSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAE 360
           S+ + VLC+H++  +KP+  GLC  CY DF+ +SGGL GG++PPAFQ AE+ER+ K   E
Sbjct: 301 SNKEAVLCMHQD--SKPFGYGLCEDCYKDFINVSGGLVGGSNPPAFQRAEKERMEKAARE 360

Query: 361 EGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAKGKMGAADEQTELD 420
           E             G++  N+ E+    L++   S +   K+  + KG+      +   D
Sbjct: 361 ENEG----------GISSLNHDEQ----LYSDYCSMSKRGKQC-SEKGEKDKDGAEEHAD 420

Query: 421 DVVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAV 480
                          SDES+++SDI D EV+GY++NEEE HYK I W EMN++YLEEQA 
Sbjct: 421 --------------TSDESDNFSDISDDEVNGYINNEEETHYKTITWTEMNKDYLEEQAA 480

Query: 481 KEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQT 540
           KEAA  AA +A +A+  NC ED   A+   +AA A  AKSRKE+Q+K+A +AKN +P  T
Sbjct: 481 KEAALKAASEALKASNSNCPED---ARKAFEAAKADAAKSRKEKQQKKAEEAKNAAPPAT 540

Query: 541 AAEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFES 600
           A EA R+ L+KKRLSS INYDVL+ LFD SA  E S K+ +TE   + +K K+E KE +S
Sbjct: 541 AVEAVRRTLDKKRLSSVINYDVLESLFDTSA-PEKSPKRSKTET--DIEKKKEENKEMKS 600

Query: 601 TEFKHGEPEQEND----------YDGDGTYGSG-LYYENMEEPYSYEHDYG 640
            E ++GE E E++          YD    + +G  +YE  EE     +D+G
Sbjct: 601 NEHENGENEDEDEEDEEEGNVESYDMKTDFQNGEKFYEEDEEEEEDGNDFG 602

[Close]

BLAST of CmoCh10G011950 vs. TAIR 10
Match: AT2G45100.1 (Cyclin/Brf1-like TBP-binding protein )

HSP 1 Score: 395.2 bits (1014), Expect = 1.0e-109
Identity = 259/644 (40.22%), Postives = 372/644 (57.76%), Query Frame = 0


Query: 1   MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ 60
           MVWC +C KNV G R       CD+CG++L+ +NFS + TF K++ GQSQ SGN ++S+Q
Sbjct: 1   MVWCKHCGKNVPGIRPYDAALSCDLCGRILENFNFSTEVTFVKNAAGQSQASGNILKSVQ 60

Query: 61  SNYSASRERTLSRAFDDMRYMRNGLNMGES-DEIIRVAGAFYRIALERNFTRGRNTEFVQ 120
           S  S+SRER + +A D++  +R+ L +G+  D++I +A  F+RIAL+ NFT+GR+ E V 
Sbjct: 61  SGMSSSRERIIRKATDELMNLRDALGIGDDRDDVIVMASNFFRIALDHNFTKGRSKELVF 120

Query: 121 AACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFI 180
           ++CLY+ CR+     LLIDFS+YLR++VY LG+V+LQLC +L + E+   +K VDPS+FI
Sbjct: 121 SSCLYLTCRQFKLAVLLIDFSSYLRVSVYDLGSVYLQLCDMLYITENHNYEKLVDPSIFI 180

Query: 181 DKFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVK 240
            +F+  LL G  ++    ++  TA  II SMKRDWMQTGRKPSG+CGAALY +ALSHG+K
Sbjct: 181 PRFSNMLLKGAHNN----KLVLTATHIIASMKRDWMQTGRKPSGICGAALYTAALSHGIK 240

Query: 241 CSKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLN 300
           CSK+DI+ IVHIC+ATLTKRLIEF +TE+ SLT +E +   ++ K + + R+    N   
Sbjct: 241 CSKTDIVNIVHICEATLTKRLIEFGDTEAASLTADE-LSKTEREKETAALRSKRKPNFYK 300

Query: 301 SSSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAE 360
                VLC+H++   KP   GLC  CYD+F+ +SGGL+GG+DPPAFQ AE+ER    M E
Sbjct: 301 EG--VVLCMHQD--CKPVDYGLCESCYDEFMTVSGGLEGGSDPPAFQRAEKER----MEE 360

Query: 361 EGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAKGKMGAADEQTELD 420
           + S++ +                                              D+Q  LD
Sbjct: 361 KASSEEN----------------------------------------------DKQVNLD 420

Query: 421 DVVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAV 480
                          SDES + SD+DD E+D Y    EE    KI ++  N  Y E++A 
Sbjct: 421 G-------------HSDESSTLSDVDDRELDCYFRTPEEVRLVKIFFDHENPGYDEKEAA 480

Query: 481 KEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQT 540
           K+AA   A          C+     A ++ +A+ AA AKSRKE++++RA + KN  P  T
Sbjct: 481 KKAAGLNA----------CNN----ASNIFEASKAAAAKSRKEKRQQRAEEEKNAPPPAT 540

Query: 541 AAEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKD-ETKEFE 600
             EA   M+ +K+    IN D L++LFD  A  E S K+ +TE   E  K ++ E  E E
Sbjct: 541 GIEAVDSMVKRKKFRD-INCDYLEELFD--ASVEKSPKRSKTETVMEKKKKEEHEIVENE 555

Query: 601 STEFKHGEPEQENDYDGDGTYGSGL---YYENMEEPYSYEHDYG 640
             E  +  P ++++ D    Y       +YE+  E     +D+G
Sbjct: 601 QEEEDYAAPYEQDEEDYAAPYEMNTDKKFYESEVEEEEDGYDFG 555

[Close]

BLAST of CmoCh10G011950 vs. TAIR 10
Match: AT2G01280.1 (Cyclin/Brf1-like TBP-binding protein )

HSP 1 Score: 370.9 bits (951), Expect = 2.0e-102
Identity = 251/631 (39.78%), Postives = 362/631 (57.37%), Query Frame = 0


Query: 1   MVWCSNCVKNVAGSRDNAGFQYCDMCGKVLDFYNFSQDPTFTKDSGGQSQLSGNFVRSIQ 60
           MVWC +C KNV   R   G   CD+CG++L+ +NFS D TF K++ GQ     N V S+ 
Sbjct: 1   MVWCKHCAKNVPKIRPFDGGLACDLCGRILENFNFSTDVTFVKNAAGQ---VCNIVTSVG 60

Query: 61  SNYSASRERTLSRAFDDMRYMRNGLNMG-ESDEIIRVAGAFYRIALERNFTRGRNTEFVQ 120
           +  S+SR+R   +A D++R +++ L +G E D+++ +A  FY  A+++NFT+GR  E VQ
Sbjct: 61  N--SSSRDRRRRKAIDELRNLKDALGIGDERDDVVDMAAVFYEAAMDQNFTKGRRAELVQ 120

Query: 121 AACLYIACREKNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFI 180
           ++CLY+AC             +YLR++VY LG+V+LQLC++L L ++   ++ VDPS+FI
Sbjct: 121 SSCLYLAC-------------SYLRVSVYELGSVYLQLCEMLYLVQNKNYEELVDPSIFI 180

Query: 181 DKFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGRKPSGLCGAALYISALSHGVK 240
            +FT  LL G       K+V+ TA  II+SMKRDW+QTGRKPSG+CGAA+Y++ALSHG+ 
Sbjct: 181 PRFTNSLLKGA--HAKAKDVANTAKNIISSMKRDWIQTGRKPSGICGAAIYMAALSHGIM 240

Query: 241 CSKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVMADKAKGSNSERTDGSNNGLN 300
            S++DI K+VH+C+AT+TKRL EF NTE+GSLT++E        +     R +      N
Sbjct: 241 YSRADIAKVVHMCEATITKRLNEFANTEAGSLTVDEL------DESEEILRKETFTPRPN 300

Query: 301 SSSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGGADPPAFQTAERERLAKEMAE 360
           S    V C HK+   K +  GLC+ C+DDF+ +SGG+ GG+DPPA+Q AE+ER+ K   E
Sbjct: 301 SDKGVVNCKHKD--LKRFGYGLCKSCHDDFIIISGGVVGGSDPPAYQRAEKERMEKAARE 360

Query: 361 EGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSSKEADAAKGKMGAADEQTELD 420
           E             G+   N+ E+        + SK  + K ++  +G+    +   E  
Sbjct: 361 ENEG----------GIGNLNHDEQ-------VNVSKR-AKKCSEKGEGETYGGERHAEY- 420

Query: 421 DVVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEKHYKKIIWEEMNREYLEEQAV 480
                          SDES+  SD DD EV+  L  E+E   K   W   N++YLEEQA 
Sbjct: 421 ---------------SDESDICSDDDDSEVEHVLLGEDETRLKTTAWNLQNKDYLEEQAE 480

Query: 481 KEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKSRKERQRKRAADAKNVSPAQT 540
           KEAA  AA         NC ED   A++L +A+ AAVA SRKE++RKRA +AKN  P+ T
Sbjct: 481 KEAALKAA---------NCPED---ARNLVEASKAAVANSRKEKRRKRAEEAKNAPPSAT 540

Query: 541 AAEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKKRTEEAGETDKTKDETKEFES 600
           A EA+      +R++    + VLD+L D    T  + KK RTE   E  K + E  E E 
Sbjct: 541 ATEAS--YTETQRVN---QHHVLDELLD----TSPTQKKPRTETVTEKKKEEHEIVEDEE 548

Query: 601 TEFKHGEPEQENDY------DGDGTYGSGLY 625
            E  +  P  + ++      + +  Y  GLY
Sbjct: 601 DEEDYAAPHADENFYEDEVEEEENGYDFGLY 548

[Close]

BLAST of CmoCh10G011950 vs. TAIR 10
Match: AT1G30455.1 (transcription regulators;translation initiation factors;zinc ion binding;transcription activators )

HSP 1 Score: 90.1 bits (222), Expect = 6.9e-18
Identity = 119/442 (26.92%), Postives = 168/442 (38.01%), Query Frame = 0


Query: 160 VLRLEEHPIVQKPVDPSLFIDKFTQCLLGGTKDDGMKKEVSRTALKIITSMKRDWMQTGR 219
           +L L E+   +  VDPS FI +F+  LL G  +    K+V  TA  II SMK +WMQTGR
Sbjct: 1   MLYLTENRKYENLVDPSTFIPRFSNKLLKGAHN----KQVVETATHIIASMKSNWMQTGR 60

Query: 220 KPSGLCGAALYISALSHGVKCSKSDIIKIVHICDATLTKRLIEFENTESGSLTLEEFIVM 279
           KPSG+CGAALY +ALSH                                           
Sbjct: 61  KPSGICGAALYTAALSH------------------------------------------- 120

Query: 280 ADKAKGSNSERTDGSNNGLNSSSDEVLCVHKNDTTKPYALGLCRICYDDFVELSGGLDGG 339
                                                                     GG
Sbjct: 121 ----------------------------------------------------------GG 180

Query: 340 ADPPAFQTAERERLAKEMAEEGSNDSSAIGKFSQGLNPCNNIEKELDNLHAADASKTDSS 399
           +DPP+FQ AE+ER+ ++                                    AS  ++ 
Sbjct: 181 SDPPSFQRAEKERMEEK------------------------------------ASTEEND 240

Query: 400 KEADAAKGKMGAADEQTELDDVVNKLGDDGLRTCASDESESWSDIDDIEVDGYLHNEEEK 459
           K+ +                               SDES + SD+DD E+D Y  N +E 
Sbjct: 241 KQQN-------------------------------SDESSTLSDLDDGELDCYFRNPKEV 249

Query: 460 HYKKIIWEEMNREYLEEQAVKEAAAAAAKKAYEANFENCSEDMKAAKDLADAAAAAVAKS 519
           H  +II++  N  Y E    KEAAA  A          C+     A +L +A+ AA AKS
Sbjct: 301 HLVEIIFDHENPGYDE----KEAAALNA----------CNN----ASNLFEASKAAAAKS 249

Query: 520 RKERQRKRAADAKNVSPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGTELSAKKK 579
           RK+++++RA + KN  P  TA EA   M+ +K+     N D L++L D SA  + ++K+ 
Sbjct: 361 RKDKRQQRAEEEKNAPPPATAMEAVDSMVKRKKFPD-TNCDYLEELLDTSA--QKASKRL 249

Query: 580 RTEEAGETDKTKDETKEFESTE 602
           +TE   E +K + E  E E  E
Sbjct: 421 KTETVMEKNKEEHEIVENEQDE 249

The following BLAST results are available for this feature:

BLAST of CmoCh10G011950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q92994	5.1e-50	29.08	Transcription factor IIIB 90 kDa subunit OS=Homo sapiens OX=9606 GN=BRF1 PE=1 SV...	[more]
Q8CFK2	4.8e-48	28.28	Transcription factor IIIB 90 kDa subunit OS=Mus musculus OX=10090 GN=Brf1 PE=1 S...	[more]
Q9P6R0	8.2e-48	27.13	Transcription factor IIIB 60 kDa subunit OS=Schizosaccharomyces pombe (strain 97...	[more]
P46070	1.5e-41	27.88	Transcription factor IIIB 70 kDa subunit OS=Kluyveromyces lactis (strain ATCC 85...	[more]
P29056	1.5e-38	27.20	Transcription factor IIIB 70 kDa subunit OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of CmoCh10G011950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAL7	0.0e+00	99.53	transcription factor IIIB 60 kDa subunit-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1HVK9	0.0e+00	97.98	transcription factor IIIB 60 kDa subunit-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0LZ47	1.8e-300	84.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G572430 PE=3 SV=1	[more]
A0A6J1F4S8	5.3e-300	84.37	transcription factor IIIB 60 kDa subunit-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A1S3BQV3	1.5e-299	84.83	transcription factor IIIB 60 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103492209...	[more]

BLAST of CmoCh10G011950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09360.1	2.0e-142	46.54	Cyclin/Brf1-like TBP-binding protein	[more]
AT2G45100.1	1.0e-109	40.22	Cyclin/Brf1-like TBP-binding protein	[more]
AT2G01280.1	2.0e-102	39.78	Cyclin/Brf1-like TBP-binding protein	[more]
AT1G30455.1	6.9e-18	26.92	transcription regulators;translation initiation factors;zinc ion binding;transcr...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 488..508
None	No IPR available	GENE3D	1.20.5.650	Single helix bin	coord: 422..484 e-value: 2.4E-18 score: 67.7
None	No IPR available	GENE3D	1.10.472.10		coord: 174..268 e-value: 1.4E-21 score: 78.5
None	No IPR available	GENE3D	1.10.472.10		coord: 63..166 e-value: 2.7E-25 score: 90.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 572..644
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 630..644
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 518..549
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 391..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 572..611
IPR000812	Transcription factor TFIIB	PRINTS	PR00685	TIFACTORIIB	coord: 120..139 score: 42.33 coord: 16..36 score: 27.3 coord: 219..235 score: 34.9
IPR000812	Transcription factor TFIIB	PANTHER	PTHR11618	TRANSCRIPTION INITIATION FACTOR IIB-RELATED	coord: 1..570
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 177..279 e-value: 0.2 score: 17.9 coord: 76..159 e-value: 0.83 score: 11.6
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 90..145 e-value: 3.38324E-5 score: 40.6849
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 174..254 e-value: 3.08407E-6 score: 43.7665
IPR013150	Transcription factor TFIIB, cyclin-like domain	PFAM	PF00382	TFIIB	coord: 195..256 e-value: 1.7E-10 score: 40.8 coord: 90..148 e-value: 1.2E-9 score: 38.1
IPR011665	Brf1, TBP-binding domain	PFAM	PF07741	BRF1	coord: 442..567 e-value: 5.8E-30 score: 103.6
IPR029529	Transcription factor IIIB subunit Brf1	PANTHER	PTHR11618:SF4	TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT	coord: 1..570
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 74..164
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 173..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G011950.1	CmoCh10G011950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006383	transcription by RNA polymerase III
biological_process	GO:0070897	transcription preinitiation complex assembly
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000126	transcription factor TFIIIB complex
cellular_component	GO:0097550	transcription preinitiation complex
molecular_function	GO:0000995	RNA polymerase III general transcription initiation factor activity
molecular_function	GO:0001006	RNA polymerase III type 3 promoter sequence-specific DNA binding
molecular_function	GO:0017025	TBP-class protein binding