CmoCh10G011040 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G011040
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Reverse transcriptase
Location	Cmo_Chr10: 6389778 .. 6396263 (+)
RNA-Seq Expression	CmoCh10G011040
Synteny	CmoCh10G011040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAACTATGCTAGACACACAACAGGCCACGTTGTTGGCTACGCAACAAGTCGCGGCAATGGCCACGCAACCAGCCAACGCGGTGGCCACGCAACCAGCCAACGCGGTGGCCACGCAACCAGCCAACGCGGTGGCCCCGCAACCGGTGGATGCGGTAGCTATCCAACCGGTGAACAACCCGCACCCGAATAGGGGCGCGAATTGGTTAAAGGATTTCAGGCGGTATAACCCCCGTCCTTTTGTCGGTTCGAAGGAAGATCCCACAGCGGCTCAAATGTGGATCGCAAACATGGAAACGACCTTTGAATCAATGCGATGCCCTGACGAACATAAGGTGGCATGTGCGACATATGTGTTACAAAAGGATGCAGAAGTGTGGTGGTCGGATAATAAACAGAGCATCAACCCGGGTGGGGGAATTACAACATGGGAGACCTTTAAGGAAGCCTTTCTAAAATACTATTATCCAAAGGAAACCCGCATAAAGAAACAGCAAGAGTTTAACCACTTAACCCAAGGTGATCGCACGGTGGATCAGTACGATCAGGACTTCATGAGATTAAGAAGGTTTGCACCGTCTTTAGCGGACACTGAAGAGAAACAGACAGAAAAATTTGTGTTAGGATTGAATCCGAAAACCCGCCGCATGTTAGAGGCCTTCAACCCAAAAACCTATGAAGAGGCACTAAGGACGGCCAAGGCCCTTGAGGAACCCCCAGAGGAAAAGAAAACAGAGCCAACAGTTGCCACAGGGAGGAAACGCCCTGTCGAGGTCGATACCACAGAATTCCAACCACCGTCCCAAAGGCCTCGGTATCAGAATAGGCCACCTGCTCCACCTCCAATAGGCCGATACCTAGCAATGGAGAAGCCCCTGTGCCGTAACTGTGGAAAGCAACATGTTGGGAGATGTTTGGCGGGCTCAGGTATGTGTTATATCTGTGGTCATGCAGGTCATGTGGCCAGAACTTGCCCTACAAAGAGCCCGGGATTTCCAAGGGAACCCCTTAGAGGACCGGTCATCCGAGAGCCCACCTTACAAACTCGTCCACAGACCAAGGCATATGTAACGACCGGTAAAGAGGCGGGAACATCTGGCACCGTGGTGACAGGTACGCTTGCTATACTAGGACACTACGACCGGTAAAGAGGCGGGAACATCTGGCACCGTGGTGACAGGTACGCTTGCTATACTAGGACACTTTGCGTTGACATTGTTTGATTCTGGTTCTACCCATTCCTTTGTTGCTTTACCATTTGTTAAACAAGCAGGATTCGTAATAGAACCCTTAATGCATGCGTTGTCGGTCGGTACCCCGGCAGGGGTAGACCTAGTTACGAAAGATAGAGTAAGGGACGGACAAGTGGTAATAGCTGGACAAACCATCCACGTAGACTTAAAGGTAGTGGATATGACGGATTTTGACGTCATACTAGGAATGGACTGGTTAGCAGAAAACTTTGCTACCATAGACTGCCATAAGAAGGAGGTGATATTCACACCTCCTAACGGACTTACCTTTAAGTTTAAAGGAACCTCCACAGGTACCACCCCAAAAATAATATCGATGATGAAAGCGAGACGCTTGATACAACAAGGGGGGTGGGCGTTCCTAGCTTATGCAGTAAATACAAAAGGAAAGGAAAAACCCATAGATACAATACCGGTAGTAAACGAATTTATGGATGTCTTTCCGGAGGACCTCCCGGGAATTCCTCCATCGCGAGAGGTAGACTTTGGAATAGATCTAGAACCAGGAACGGGACCCATCTCTAAGGCCCCGTACCGCATGGCACCAGCAGAACTAAAAGAGCTTAAAATACAACTGCAAGACCTGCTAGATAAGGGCTTCATTCGACCTAGCGTGTCCCCTTGGGGTGCGCCAGTGTTGTTTGTTAAAAAGAAAGACGGCTCAATGCGTTTATGCATTGATTATAGGGAATTAAACAAGAGGACGGTAAAGAACAAATACCCGTTACCCCGAATTGAGGACCTATTTGATCAACTACGTGGGGCGACAGTGTTTTCTAAAATAGATCTTCGATCAGGATACCATCAAATTAAGATTAAAAATGAAGACATACCGAAAACGGCCTTTCGAACCAGATATGGCCACTACGAGTTTGTGGTGATGTCTTTTGGTCTCACCAATGCCCCAGCGGTATTTATGGAACTAATGAACCGAGTATTTAAGGAGTGCCTAGACTTGTTTGTGATCGTGTTCATAGACGATATCCTGATATACTCGAAAACGGACCTAGAACACCAAGAACACCTTCGCAAAGCCTTAACTATCCTAAGAGAGAATAGGTTGTATGCCAAGTTCACCAAGTGTGAATTTTGGCTACGACAGGTTTCGTTTCTGGGGCACGTAGTGTCTAAAGACGGAATCTTCGTAGATCCCAATAAGATAGAAGCGGTCACGAAATGGAAACGCCCAACAACGGTCACCGAGATACGAAGTTTCTTGGGATTGGCGGGTTATTATCGAAGGTTTGTCCAGGACTTCGCTAGAATAGCCACGCCTCTCACCCAATTAACAAAAAAAGGTGTACCTTTTGTTTGGGATGATACTTGTGAGGCCAGCTTTCAAGAACTAAAACAACGACTAGTATCCACCCCAGTGCTCACAGTTCCAGAAGGTTCTGTGGGATACGCGATTTACAGTGACGCATCCAAAAAGGGATTAGGTTGTGTACTGATGCAACATGGCAAGGTTGTTGCGTATGCGTCACACCAACTAAAAGATTACAAGAAAAACTATCCTACACATGATTTGGAGCTGGCAGCAGTAGTGTTCACGTTAAAAATTTGGCGACACTACTTGTATGGCGAAAAGACCCAGATCTACACAGACCACAAAAGCCTAAAATATTTGTTCACGCAAAAAGAATTGAACATGCGGCAACGTAGATGGTTAGAGCTGGTAAAAGATTACGACATAGACATCCAGTACCACCCTGGGAAAGCAAACGTAGTCGCTGATGCACTGAGCCGAAAAGTAGTACACTCGTCGGCCTTCATCACCAGGGAGCCACGAGTGCGAACTGATTTCGAACAGGCTGATATCGCGGTAGTAACCAAAGAAGTTGCCGCCCAAATAGCCCGACTGACAGTGCGCCCCACGCTCAGACAAAGAATCATAGACTCACAACGTGAGGATCCAAGCCTAAGTAAAATCCTAGACCAATTGGCTGTTGGCCCAGTGGACGGATTCACTAAATCAACAGATGACGGATTATTATGCCAAGGGCGTTTATGTGTCCCACCCATGAGCGGAATAAAGAATGAAATCCTAACGGAGGCACACAACTCAACCTTCTCGATACATCCAGGTGGAACAAAGATGTATCAAGACTTGAAAAAACACTTCTGGTGGCGAAGTATGAAGAAGGATATCGCGGAGTACGTGAGTAAGTGTCTAGTGTGCCAACAAGTAAAAGCCCCTAGGCAGAAAACCGCTGGGCTACTACAACCTCTAAGTATACCGGAATGGAAATGGGAAAACATTGCCATGGATTTCATAGTAGGCTTACCCAAAACATTAAAGGGCTGTACGGTAATCTGGGTGGTCGTGGATCGCCTGACAAAGTCGGCTCACTTCCTACCGGGTAAGGCAACATATACAGTAGACAATTGGGCACAACTGTATGTTAAAGAAATTGTGAGGTTGCATGGAGTACCAGTGTCAATTGTGTCGGATCGGGACCCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGCGATGGGTACCCGCCTCGACTTTAGCACAGCCTTCCACCCCCAAACAGATGGCCAAACAGAACGATTAAACCAAATTCTGGAAGACATGCTTCGGGCATGTGTTATGGATTTCACAGGGAGTTGGGACACCAAACTACACTTAATGGAATTCTCTTACAATAATAGCTTCCAAGCAACCATCGGGATGGCACCCTTTGAAGCGTTGTATGGAAAACGATGTAGGTCCCCCTTGTGTTGGGACGAGGTAGGAGAACGAGAATTGATAGGACCCGAGCTGGTCCGTGTCACCAACGAAGCAATTCAGAAAATCCGAGTAAGAATGCGTACCGCGCAGAGTAGGCAAAAGAGCTACGCCGACGTTAGGCGTAGGAATTTAGAGTTTGAAGAGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCTACGCGAATCCCGTACGCTGAACACCGCCGGCAAGGAAGACGGAACGGCGGACTTCCGAGCTTCTCCAGATCCGGGAGTGCGAGGCCCTTACCAACGAAATCGGTATCAAAAAAAGACGTCGGGACGACGTTGTCGAAGAGAGAGAGGGATCGCCAGAAAATCGCGCAGGCAGTCGGGCGAAGAGGACGAAGTCCGACCCGCGATCTGGATCCGGGAACCCGAACCGAACCCCGTACCTTCGGTCAGCCCAGAACCCACATTACCCGCAGCCCAGACACCCGACCTCCAATCACTATGCGGCCCATCAACCCGCGGCCCGTCACCCGCGAGCCGGCCCATCACCGCGAGCGGCCCGTTAACCCCCGCCTCGACCCGAGACGCCTGCACACACGTCGCTCTCGGATTGTGCCACGTGTCACGTCGGCAGCGCGGCTACTCTCGGCTCAGGCGGCTTCATCGGCTCGGTGGTGGCTCGGCGGCTTCGGCGGCTTATTGGGCTCGGGAAACCTGTTTCCAGCCCGTTTGACACCGTATCGACCCTCCCGGACCTAGTTTCGGCCCTGTTTAAGGTAAAAGGGAACATTTTAAGGTCGTATTTCACAAATTCCAGTTGGGAATTTATTCTTATTTGTGAAATACTAACGAAAGTGACTCATGAACTAATAGGAACCAACCACCAACGGAAGCGTAGGACGTCCACGAGGAGCTAGGAGCTTACGTTATATTCTAGGGAGTACTTCGGCTAAGGCCTACCAAGTAAGTGGCTCACCCGTTGTAGGTTACGCGTTAATTGCTGAATGTTGGCACGTGCCCGCGGTTATGCACGTGCCATTAAATTGTATGCTAGCTTAATGTGCTTAAGTACGAAATCATGTGATCGTGAATGTATGTTGTCTATGCTGCTTAGTTGATGTGATATGAATGCATGTGACGAGGTGTGACCCTTGTATGATTATGGCTTGTTTTATGAATATTGAAATGTAACTGAATGAATTGTTTGACATGAAATACGGTGAATTGCATGATACATAACCCCGCTAGGAATATGTATGATATGTAACGAAATGAGAATGAGAATGACATGTAAGCATGAAATCGGGACACGGGGTTATGTTCATTAAATGGTGATTGTAGGACTAGTGGGACCTCATGCATATTGTGTGATCATGCATTTGGGGGGATACCCCTATCCCATCACGAGGGTACGGACGCGTACATCCAAATGGCAGGACCACGATCGTTATGCCCTGCATAGCGCTGCCGTGACGGTTTTAGTTTTAACGGGTCCCGGTGGGCCCCCAGAGCATGCCCACCGGCTAGGGACAGTGGCCCAGCGGTGTGCGAACTAGCTGGTGAGCCCATACTCGCACGTATGGGCTGCGTGTAGAGTATATGGTACATGTCCACGGTTACCTGTTAGGATTACACCGTAGGGAAAACGAAACGAAACGAAACGAAACGATAGGTCCCATCATTTCATTGCATGTGTATGTCGCATAACCCCGATAGGGGGTCACTTACTGAGTATTCTAGAAATACTCAAGCCTCGTGCTACTCTACTTTTGCAGATAAGGGCAAGGCACCCATGTGACGACGACGACGGCATCGTACCCCCAGGATCGTGGCACATGCATAGGGTAGTGGGTTGTTCTTTTTCCATTTCGTAG

mRNA sequence

ATGCAAACTATGCTAGACACACAACAGGCCACGTTGTTGGCTACGCAACAAGTCGCGGCAATGGCCACGCAACCAGCCAACGCGGTGGCCACGCAACCAGCCAACGCGGTGGCCACGCAACCAGCCAACGCGGTGGCCCCGCAACCGGTGGATGCGGTAGCTATCCAACCGGTGAACAACCCGCACCCGAATAGGGGCGCGAATTGGTTAAAGGATTTCAGGCGGTATAACCCCCGTCCTTTTGTCGGTTCGAAGGAAGATCCCACAGCGGCTCAAATGTGGATCGCAAACATGGAAACGACCTTTGAATCAATGCGATGCCCTGACGAACATAAGGTGGCATGTGCGACATATGTGTTACAAAAGGATGCAGAAGTGTGGTGGTCGGATAATAAACAGAGCATCAACCCGGGTGGGGGAATTACAACATGGGAGACCTTTAAGGAAGCCTTTCTAAAATACTATTATCCAAAGGAAACCCGCATAAAGAAACAGCAAGAGTTTAACCACTTAACCCAAGGTGATCGCACGGTGGATCAGTACGATCAGGACTTCATGAGATTAAGAAGGTTTGCACCGTCTTTAGCGGACACTGAAGAGAAACAGACAGAAAAATTTGTGTTAGGATTGAATCCGAAAACCCGCCGCATGTTAGAGGCCTTCAACCCAAAAACCTATGAAGAGGCACTAAGGACGGCCAAGGCCCTTGAGGAACCCCCAGAGGAAAAGAAAACAGAGCCAACAGTTGCCACAGGGAGGAAACGCCCTGTCGAGGTCGATACCACAGAATTCCAACCACCGTCCCAAAGGCCTCGGTATCAGAATAGGCCACCTGCTCCACCTCCAATAGGCCGATACCTAGCAATGGAGAAGCCCCTGTGCCGTAACTGTGGAAAGCAACATGTTGGGAGATGTTTGGCGGGCTCAGGTATGTGTTATATCTGTGGTCATGCAGGTCATGTGGCCAGAACTTGCCCTACAAAGAGCCCGGGATTTCCAAGGGAACCCCTTAGAGGACCGGTCATCCGAGAGCCCACCTTACAAACTCGTCCACAGACCAAGGCATATGTAACGACCGGTAAAGAGGCGGGAACATCTGGCACCGTGGTGACAGGTACGCTTGCTATACTAGGACACTTTGCGTTGACATTGTTTGATTCTGGTTCTACCCATTCCTTTGTTGCTTTACCATTTGTTAAACAAGCAGGATTCGTAATAGAACCCTTAATGCATGCGTTGTCGGTCGGTACCCCGGCAGGGGTAGACCTAGTTACGAAAGATAGAGTAAGGGACGGACAAGTGGTAATAGCTGGACAAACCATCCACGTAGACTTAAAGGTAGTGGATATGACGGATTTTGACGTCATACTAGGAATGGACTGGTTAGCAGAAAACTTTGCTACCATAGACTGCCATAAGAAGGAGGTGATATTCACACCTCCTAACGGACTTACCTTTAAGTTTAAAGGAACCTCCACAGGTACCACCCCAAAAATAATATCGATGATGAAAGCGAGACGCTTGATACAACAAGGGGGGTGGGCGTTCCTAGCTTATGCAGTAAATACAAAAGGAAAGGAAAAACCCATAGATACAATACCGGTAGTAAACGAATTTATGGATGTCTTTCCGGAGGACCTCCCGGGAATTCCTCCATCGCGAGAGGTAGACTTTGGAATAGATCTAGAACCAGGAACGGGACCCATCTCTAAGGCCCCGTACCGCATGGCACCAGCAGAACTAAAAGAGCTTAAAATACAACTGCAAGACCTGCTAGATAAGGGCTTCATTCGACCTAGCGTGTCCCCTTGGGGTGCGCCAGTGTTGTTTGTTAAAAAGAAAGACGGCTCAATGCGTTTATGCATTGATTATAGGGAATTAAACAAGAGGACGGTAAAGAACAAATACCCGTTACCCCGAATTGAGGACCTATTTGATCAACTACGTGGGGCGACAGTGTTTTCTAAAATAGATCTTCGATCAGGATACCATCAAATTAAGATTAAAAATGAAGACATACCGAAAACGGCCTTTCGAACCAGATATGGCCACTACGAGTTTGTGGTGATGTCTTTTGGTCTCACCAATGCCCCAGCGGTATTTATGGAACTAATGAACCGAGTATTTAAGGAGTGCCTAGACTTGTTTGTGATCGTGTTCATAGACGATATCCTGATATACTCGAAAACGGACCTAGAACACCAAGAACACCTTCGCAAAGCCTTAACTATCCTAAGAGAGAATAGGTTGTATGCCAAGTTCACCAAGTGTGAATTTTGGCTACGACAGGTTTCGTTTCTGGGGCACGTAGTGTCTAAAGACGGAATCTTCGTAGATCCCAATAAGATAGAAGCGGTCACGAAATGGAAACGCCCAACAACGGTCACCGAGATACGAAGTTTCTTGGGATTGGCGGGTTATTATCGAAGGTTTGTCCAGGACTTCGCTAGAATAGCCACGCCTCTCACCCAATTAACAAAAAAAGGTGTACCTTTTGTTTGGGATGATACTTGTGAGGCCAGCTTTCAAGAACTAAAACAACGACTAGTATCCACCCCAGTGCTCACAGTTCCAGAAGGTTCTGTGGGATACGCGATTTACAGTGACGCATCCAAAAAGGGATTAGGTTGTGTACTGATGCAACATGGCAAGGTTGTTGCGTATGCGTCACACCAACTAAAAGATTACAAGAAAAACTATCCTACACATGATTTGGAGCTGGCAGCAGTAGTGTTCACGTTAAAAATTTGGCGACACTACTTGTATGGCGAAAAGACCCAGATCTACACAGACCACAAAAGCCTAAAATATTTGTTCACGCAAAAAGAATTGAACATGCGGCAACGTAGATGGTTAGAGCTGGTAAAAGATTACGACATAGACATCCAGTACCACCCTGGGAAAGCAAACGTAGTCGCTGATGCACTGAGCCGAAAAGTAGTACACTCGTCGGCCTTCATCACCAGGGAGCCACGAGTGCGAACTGATTTCGAACAGGCTGATATCGCGGTAGTAACCAAAGAAGTTGCCGCCCAAATAGCCCGACTGACAGTGCGCCCCACGCTCAGACAAAGAATCATAGACTCACAACGTGAGGATCCAAGCCTAAGTAAAATCCTAGACCAATTGGCTGTTGGCCCAGTGGACGGATTCACTAAATCAACAGATGACGGATTATTATGCCAAGGGCGTTTATGTGTCCCACCCATGAGCGGAATAAAGAATGAAATCCTAACGGAGGCACACAACTCAACCTTCTCGATACATCCAGGTGGAACAAAGATGTATCAAGACTTGAAAAAACACTTCTGGTGGCGAAGTATGAAGAAGGATATCGCGGAGCTTACCCAAAACATTAAAGGGCTGTACGGTAATCTGGGTGGTCGTGGATCGCCTGACAAAGTCGGCTCACTTCCTACCGGGTCCCCCTTGTGTTGGGACGAGGTAGGAGAACGAGAATTGATAGGACCCGAGCTGGTCCGTGTCACCAACGAAGCAATTCAGAAAATCCGAATAAGGGCAAGGCACCCATGTGACGACGACGACGGCATCGTACCCCCAGGATCGTGGCACATGCATAGGGTAGTGGGTTGTTCTTTTTCCATTTCGTAG

Coding sequence (CDS)

ATGCAAACTATGCTAGACACACAACAGGCCACGTTGTTGGCTACGCAACAAGTCGCGGCAATGGCCACGCAACCAGCCAACGCGGTGGCCACGCAACCAGCCAACGCGGTGGCCACGCAACCAGCCAACGCGGTGGCCCCGCAACCGGTGGATGCGGTAGCTATCCAACCGGTGAACAACCCGCACCCGAATAGGGGCGCGAATTGGTTAAAGGATTTCAGGCGGTATAACCCCCGTCCTTTTGTCGGTTCGAAGGAAGATCCCACAGCGGCTCAAATGTGGATCGCAAACATGGAAACGACCTTTGAATCAATGCGATGCCCTGACGAACATAAGGTGGCATGTGCGACATATGTGTTACAAAAGGATGCAGAAGTGTGGTGGTCGGATAATAAACAGAGCATCAACCCGGGTGGGGGAATTACAACATGGGAGACCTTTAAGGAAGCCTTTCTAAAATACTATTATCCAAAGGAAACCCGCATAAAGAAACAGCAAGAGTTTAACCACTTAACCCAAGGTGATCGCACGGTGGATCAGTACGATCAGGACTTCATGAGATTAAGAAGGTTTGCACCGTCTTTAGCGGACACTGAAGAGAAACAGACAGAAAAATTTGTGTTAGGATTGAATCCGAAAACCCGCCGCATGTTAGAGGCCTTCAACCCAAAAACCTATGAAGAGGCACTAAGGACGGCCAAGGCCCTTGAGGAACCCCCAGAGGAAAAGAAAACAGAGCCAACAGTTGCCACAGGGAGGAAACGCCCTGTCGAGGTCGATACCACAGAATTCCAACCACCGTCCCAAAGGCCTCGGTATCAGAATAGGCCACCTGCTCCACCTCCAATAGGCCGATACCTAGCAATGGAGAAGCCCCTGTGCCGTAACTGTGGAAAGCAACATGTTGGGAGATGTTTGGCGGGCTCAGGTATGTGTTATATCTGTGGTCATGCAGGTCATGTGGCCAGAACTTGCCCTACAAAGAGCCCGGGATTTCCAAGGGAACCCCTTAGAGGACCGGTCATCCGAGAGCCCACCTTACAAACTCGTCCACAGACCAAGGCATATGTAACGACCGGTAAAGAGGCGGGAACATCTGGCACCGTGGTGACAGGTACGCTTGCTATACTAGGACACTTTGCGTTGACATTGTTTGATTCTGGTTCTACCCATTCCTTTGTTGCTTTACCATTTGTTAAACAAGCAGGATTCGTAATAGAACCCTTAATGCATGCGTTGTCGGTCGGTACCCCGGCAGGGGTAGACCTAGTTACGAAAGATAGAGTAAGGGACGGACAAGTGGTAATAGCTGGACAAACCATCCACGTAGACTTAAAGGTAGTGGATATGACGGATTTTGACGTCATACTAGGAATGGACTGGTTAGCAGAAAACTTTGCTACCATAGACTGCCATAAGAAGGAGGTGATATTCACACCTCCTAACGGACTTACCTTTAAGTTTAAAGGAACCTCCACAGGTACCACCCCAAAAATAATATCGATGATGAAAGCGAGACGCTTGATACAACAAGGGGGGTGGGCGTTCCTAGCTTATGCAGTAAATACAAAAGGAAAGGAAAAACCCATAGATACAATACCGGTAGTAAACGAATTTATGGATGTCTTTCCGGAGGACCTCCCGGGAATTCCTCCATCGCGAGAGGTAGACTTTGGAATAGATCTAGAACCAGGAACGGGACCCATCTCTAAGGCCCCGTACCGCATGGCACCAGCAGAACTAAAAGAGCTTAAAATACAACTGCAAGACCTGCTAGATAAGGGCTTCATTCGACCTAGCGTGTCCCCTTGGGGTGCGCCAGTGTTGTTTGTTAAAAAGAAAGACGGCTCAATGCGTTTATGCATTGATTATAGGGAATTAAACAAGAGGACGGTAAAGAACAAATACCCGTTACCCCGAATTGAGGACCTATTTGATCAACTACGTGGGGCGACAGTGTTTTCTAAAATAGATCTTCGATCAGGATACCATCAAATTAAGATTAAAAATGAAGACATACCGAAAACGGCCTTTCGAACCAGATATGGCCACTACGAGTTTGTGGTGATGTCTTTTGGTCTCACCAATGCCCCAGCGGTATTTATGGAACTAATGAACCGAGTATTTAAGGAGTGCCTAGACTTGTTTGTGATCGTGTTCATAGACGATATCCTGATATACTCGAAAACGGACCTAGAACACCAAGAACACCTTCGCAAAGCCTTAACTATCCTAAGAGAGAATAGGTTGTATGCCAAGTTCACCAAGTGTGAATTTTGGCTACGACAGGTTTCGTTTCTGGGGCACGTAGTGTCTAAAGACGGAATCTTCGTAGATCCCAATAAGATAGAAGCGGTCACGAAATGGAAACGCCCAACAACGGTCACCGAGATACGAAGTTTCTTGGGATTGGCGGGTTATTATCGAAGGTTTGTCCAGGACTTCGCTAGAATAGCCACGCCTCTCACCCAATTAACAAAAAAAGGTGTACCTTTTGTTTGGGATGATACTTGTGAGGCCAGCTTTCAAGAACTAAAACAACGACTAGTATCCACCCCAGTGCTCACAGTTCCAGAAGGTTCTGTGGGATACGCGATTTACAGTGACGCATCCAAAAAGGGATTAGGTTGTGTACTGATGCAACATGGCAAGGTTGTTGCGTATGCGTCACACCAACTAAAAGATTACAAGAAAAACTATCCTACACATGATTTGGAGCTGGCAGCAGTAGTGTTCACGTTAAAAATTTGGCGACACTACTTGTATGGCGAAAAGACCCAGATCTACACAGACCACAAAAGCCTAAAATATTTGTTCACGCAAAAAGAATTGAACATGCGGCAACGTAGATGGTTAGAGCTGGTAAAAGATTACGACATAGACATCCAGTACCACCCTGGGAAAGCAAACGTAGTCGCTGATGCACTGAGCCGAAAAGTAGTACACTCGTCGGCCTTCATCACCAGGGAGCCACGAGTGCGAACTGATTTCGAACAGGCTGATATCGCGGTAGTAACCAAAGAAGTTGCCGCCCAAATAGCCCGACTGACAGTGCGCCCCACGCTCAGACAAAGAATCATAGACTCACAACGTGAGGATCCAAGCCTAAGTAAAATCCTAGACCAATTGGCTGTTGGCCCAGTGGACGGATTCACTAAATCAACAGATGACGGATTATTATGCCAAGGGCGTTTATGTGTCCCACCCATGAGCGGAATAAAGAATGAAATCCTAACGGAGGCACACAACTCAACCTTCTCGATACATCCAGGTGGAACAAAGATGTATCAAGACTTGAAAAAACACTTCTGGTGGCGAAGTATGAAGAAGGATATCGCGGAGCTTACCCAAAACATTAAAGGGCTGTACGGTAATCTGGGTGGTCGTGGATCGCCTGACAAAGTCGGCTCACTTCCTACCGGGTCCCCCTTGTGTTGGGACGAGGTAGGAGAACGAGAATTGATAGGACCCGAGCTGGTCCGTGTCACCAACGAAGCAATTCAGAAAATCCGAATAAGGGCAAGGCACCCATGTGACGACGACGACGGCATCGTACCCCCAGGATCGTGGCACATGCATAGGGTAGTGGGTTGTTCTTTTTCCATTTCGTAG

Protein sequence

MQTMLDTQQATLLATQQVAAMATQPANAVATQPANAVATQPANAVAPQPVDAVAIQPVNNPHPNRGANWLKDFRRYNPRPFVGSKEDPTAAQMWIANMETTFESMRCPDEHKVACATYVLQKDAEVWWSDNKQSINPGGGITTWETFKEAFLKYYYPKETRIKKQQEFNHLTQGDRTVDQYDQDFMRLRRFAPSLADTEEKQTEKFVLGLNPKTRRMLEAFNPKTYEEALRTAKALEEPPEEKKTEPTVATGRKRPVEVDTTEFQPPSQRPRYQNRPPAPPPIGRYLAMEKPLCRNCGKQHVGRCLAGSGMCYICGHAGHVARTCPTKSPGFPREPLRGPVIREPTLQTRPQTKAYVTTGKEAGTSGTVVTGTLAILGHFALTLFDSGSTHSFVALPFVKQAGFVIEPLMHALSVGTPAGVDLVTKDRVRDGQVVIAGQTIHVDLKVVDMTDFDVILGMDWLAENFATIDCHKKEVIFTPPNGLTFKFKGTSTGTTPKIISMMKARRLIQQGGWAFLAYAVNTKGKEKPIDTIPVVNEFMDVFPEDLPGIPPSREVDFGIDLEPGTGPISKAPYRMAPAELKELKIQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLRGATVFSKIDLRSGYHQIKIKNEDIPKTAFRTRYGHYEFVVMSFGLTNAPAVFMELMNRVFKECLDLFVIVFIDDILIYSKTDLEHQEHLRKALTILRENRLYAKFTKCEFWLRQVSFLGHVVSKDGIFVDPNKIEAVTKWKRPTTVTEIRSFLGLAGYYRRFVQDFARIATPLTQLTKKGVPFVWDDTCEASFQELKQRLVSTPVLTVPEGSVGYAIYSDASKKGLGCVLMQHGKVVAYASHQLKDYKKNYPTHDLELAAVVFTLKIWRHYLYGEKTQIYTDHKSLKYLFTQKELNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKVVHSSAFITREPRVRTDFEQADIAVVTKEVAAQIARLTVRPTLRQRIIDSQREDPSLSKILDQLAVGPVDGFTKSTDDGLLCQGRLCVPPMSGIKNEILTEAHNSTFSIHPGGTKMYQDLKKHFWWRSMKKDIAELTQNIKGLYGNLGGRGSPDKVGSLPTGSPLCWDEVGERELIGPELVRVTNEAIQKIRIRARHPCDDDDGIVPPGSWHMHRVVGCSFSIS

Homology

[Close]

BLAST of CmoCh10G011040 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 2.7e-89
Identity = 188/566 (33.22%), Postives = 320/566 (56.54%), Query Frame = 0


Query: 452  DFDVILGMDWLAENFATIDCHKKEVIFTPPNGLTFKFKGTSTGTTPKIISMMKARRLIQQ 511
            ++D++LG   LAE  ATI    +EV          +   T   +  + ++M+    L Q 
Sbjct: 89   NYDLLLGRKLLAEAKATISYRDQEVTLYNNKYKLIEGIATHEQSHFQNVNMIPDTMLRQP 148

Query: 512  GGWAFL----AYAVNTKGKEKPIDTIPVVNEFMDVFPEDLPGIPPSREVDFGIDLEPGTG 571
               + +     Y +     E+      ++ ++ D+   +   +  + +    I+ +    
Sbjct: 149  NKISPILESDLYRLEHLNNEEKQRLCALLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLP 208

Query: 572  PISKAPYRMAPAELKELKIQLQDLLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCI 631
              SK  Y  A  +  E++ Q+QD+L++G IR S SP+ +P+  V KK+D S     R+ I
Sbjct: 209  LYSKYSYPQAYEQ--EVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVI 268

Query: 632  DYRELNKRTVKNKYPLPRIEDLFDQLRGATVFSKIDLRSGYHQIKIKNEDIPKTAFRTRY 691
            DYR+LN+ TV +++P+P ++++  +L     F+ IDL  G+HQI++  E + KTAF T++
Sbjct: 269  DYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKH 328

Query: 692  GHYEFVVMSFGLTNAPAVFMELMNRVFKECLDLFVIVFIDDILIYSKTDLEHQEHLRKAL 751
            GHYE++ M FGL NAPA F   MN + +  L+   +V++DDI+++S +  EH + L    
Sbjct: 329  GHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVF 388

Query: 752  TILRENRLYAKFTKCEFWLRQVSFLGHVVSKDGIFVDPNKIEAVTKWKRPTTVTEIRSFL 811
              L +  L  +  KCEF  ++ +FLGHV++ DGI  +P KIEA+ K+  PT   EI++FL
Sbjct: 389  EKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFL 448

Query: 812  GLAGYYRRFVQDFARIATPLTQLTKKGVPF-VWDDTCEASFQELKQRLVSTPVLTVPEGS 871
            GL GYYR+F+ +FA IA P+T+  KK +     +   +++F++LK  +   P+L VP+ +
Sbjct: 449  GLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFT 508

Query: 872  VGYAIYSDASKKGLGCVLMQHGKVVAYASHQLKDYKKNYPTHDLELAAVVFTLKIWRHYL 931
              + + +DAS   LG VL Q G  ++Y S  L +++ NY T + EL A+V+  K +RHYL
Sbjct: 509  KKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYL 568

Query: 932  YGEKTQIYTDHKSLKYLFTQKELNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKVV 991
             G   +I +DH+ L +L+  K+ N +  RW   + ++D DI+Y  GK N VADALSR + 
Sbjct: 569  LGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR-IK 628

Query: 992  HSSAFITREPRVRTDFEQADIAVVTK 1008
                +++ + +   + + +D+  +T+
Sbjct: 629  LEETYLSEQTQHSAEEDNSDLIFITE 651

[Close]

BLAST of CmoCh10G011040 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.2e-84
Identity = 162/420 (38.57%), Postives = 250/420 (59.52%), Query Frame = 0


Query: 568 PISKAPYRMAPAELKELKIQLQDLLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCI 627
           PI    Y +A     E++ Q+Q++L++G IR S SP+ +P   V KK         R+ I
Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265

Query: 628 DYRELNKRTVKNKYPLPRIEDLFDQLRGATVFSKIDLRSGYHQIKIKNEDIPKTAFRTRY 687
           DYR+LN+ T+ ++YP+P ++++  +L     F+ IDL  G+HQI++  E I KTAF T+ 
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325

Query: 688 GHYEFVVMSFGLTNAPAVFMELMNRVFKECLDLFVIVFIDDILIYSKTDLEHQEHLRKAL 747
           GHYE++ M FGL NAPA F   MN + +  L+   +V++DDI+I+S +  EH   ++   
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVF 385

Query: 748 TILRENRLYAKFTKCEFWLRQVSFLGHVVSKDGIFVDPNKIEAVTKWKRPTTVTEIRSFL 807
           T L +  L  +  KCEF  ++ +FLGH+V+ DGI  +P K++A+  +  PT   EIR+FL
Sbjct: 386 TKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFL 445

Query: 808 GLAGYYRRFVQDFARIATPLTQLTKKGVPFVWDDTCE----ASFQELKQRLVSTPVLTVP 867
           GL GYYR+F+ ++A IA P+T   KK       DT +     +F++LK  ++  P+L +P
Sbjct: 446 GLTGYYRKFIPNYADIAKPMTSCLKKRTKI---DTQKLEYIEAFEKLKALIIRDPILQLP 505

Query: 868 EGSVGYAIYSDASKKGLGCVLMQHGKVVAYASHQLKDYKKNYPTHDLELAAVVFTLKIWR 927
           +    + + +DAS   LG VL Q+G  +++ S  L D++ NY   + EL A+V+  K +R
Sbjct: 506 DFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFR 565

Query: 928 HYLYGEKTQIYTDHKSLKYLFTQKELNMRQRRWLELVKDYDIDIQYHPGKANVVADALSR 979
           HYL G +  I +DH+ L++L   KE   +  RW   + +Y   I Y  GK N VADALSR
Sbjct: 566 HYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of CmoCh10G011040 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 3.5e-84
Identity = 190/597 (31.83%), Postives = 309/597 (51.76%), Query Frame = 0


Query: 535  VVNEFMDVFPE-DLPGIP-PSREVDFGIDLEPGTGPISKAPYRMAPAELKELKIQLQDLL 594
            +  EF D+  E +   +P P + ++F ++L      +    Y + P +++ +  ++   L
Sbjct: 377  IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGL 436

Query: 595  DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLRGAT 654
              G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP IE L  +++G+T
Sbjct: 437  KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 496

Query: 655  VFSKIDLRSGYHQIKIKNEDIPKTAFRTRYGHYEFVVMSFGLTNAPAVFMELMNRVFKEC 714
            +F+K+DL+S YH I+++  D  K AFR   G +E++VM +G++ APA F   +N +  E 
Sbjct: 497  IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556

Query: 715  LDLFVIVFIDDILIYSKTDLEHQEHLRKALTILRENRLYAKFTKCEFWLRQVSFLGHVVS 774
             +  V+ ++DDILI+SK++ EH +H++  L  L+   L     KCEF   QV F+G+ +S
Sbjct: 557  KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616

Query: 775  KDGIFVDPNKIEAVTKWKRPTTVTEIRSFLGLAGYYRRFVQDFARIATPLTQLTKKGVPF 834
            + G       I+ V +WK+P    E+R FLG   Y R+F+   +++  PL  L KK V +
Sbjct: 617  EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676

Query: 835  VWDDTCEASFQELKQRLVSTPVLTVPEGSVGYAIYSDASKKGLGCVLMQHGK-----VVA 894
             W  T   + + +KQ LVS PVL   + S    + +DAS   +G VL Q         V 
Sbjct: 677  KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736

Query: 895  YASHQLKDYKKNYPTHDLELAAVVFTLKIWRHYLYG--EKTQIYTDHKSLKYLFTQKE-- 954
            Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +   
Sbjct: 737  YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 796

Query: 955  LNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKVVHSSAFITREPRVRTDFEQADIA 1014
             N R  RW   ++D++ +I Y PG AN +ADALSR V  +      EP +  D E   I 
Sbjct: 797  ENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDET------EP-IPKDSEDNSIN 856

Query: 1015 VVTKEVAAQIARLTVRPTLRQRIIDSQREDPSLSKILDQLAVGPVDGFTKSTDDGLLCQG 1074
             V         ++++    + +++     D  L  +L+       +       DGLL   
Sbjct: 857  FVN--------QISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENI--QLKDGLLINS 916

Query: 1075 R--LCVPPMSGIKNEILTEAHNSTFSIHPGGTKMYQDLKKHFWWRSMKKDIAELTQN 1119
            +  + +P  + +   I+ + H     IHPG   +   + + F W+ ++K I E  QN
Sbjct: 917  KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQN 956

[Close]

BLAST of CmoCh10G011040 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 3.5e-84
Identity = 190/597 (31.83%), Postives = 309/597 (51.76%), Query Frame = 0


Query: 535  VVNEFMDVFPE-DLPGIP-PSREVDFGIDLEPGTGPISKAPYRMAPAELKELKIQLQDLL 594
            +  EF D+  E +   +P P + ++F ++L      +    Y + P +++ +  ++   L
Sbjct: 377  IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGL 436

Query: 595  DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLRGAT 654
              G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP IE L  +++G+T
Sbjct: 437  KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 496

Query: 655  VFSKIDLRSGYHQIKIKNEDIPKTAFRTRYGHYEFVVMSFGLTNAPAVFMELMNRVFKEC 714
            +F+K+DL+S YH I+++  D  K AFR   G +E++VM +G++ APA F   +N +  E 
Sbjct: 497  IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556

Query: 715  LDLFVIVFIDDILIYSKTDLEHQEHLRKALTILRENRLYAKFTKCEFWLRQVSFLGHVVS 774
             +  V+ ++DDILI+SK++ EH +H++  L  L+   L     KCEF   QV F+G+ +S
Sbjct: 557  KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616

Query: 775  KDGIFVDPNKIEAVTKWKRPTTVTEIRSFLGLAGYYRRFVQDFARIATPLTQLTKKGVPF 834
            + G       I+ V +WK+P    E+R FLG   Y R+F+   +++  PL  L KK V +
Sbjct: 617  EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676

Query: 835  VWDDTCEASFQELKQRLVSTPVLTVPEGSVGYAIYSDASKKGLGCVLMQHGK-----VVA 894
             W  T   + + +KQ LVS PVL   + S    + +DAS   +G VL Q         V 
Sbjct: 677  KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736

Query: 895  YASHQLKDYKKNYPTHDLELAAVVFTLKIWRHYLYG--EKTQIYTDHKSLKYLFTQKE-- 954
            Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +   
Sbjct: 737  YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 796

Query: 955  LNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKVVHSSAFITREPRVRTDFEQADIA 1014
             N R  RW   ++D++ +I Y PG AN +ADALSR V  +      EP +  D E   I 
Sbjct: 797  ENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDET------EP-IPKDSEDNSIN 856

Query: 1015 VVTKEVAAQIARLTVRPTLRQRIIDSQREDPSLSKILDQLAVGPVDGFTKSTDDGLLCQG 1074
             V         ++++    + +++     D  L  +L+       +       DGLL   
Sbjct: 857  FVN--------QISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENI--QLKDGLLINS 916

Query: 1075 R--LCVPPMSGIKNEILTEAHNSTFSIHPGGTKMYQDLKKHFWWRSMKKDIAELTQN 1119
            +  + +P  + +   I+ + H     IHPG   +   + + F W+ ++K I E  QN
Sbjct: 917  KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQN 956

[Close]

BLAST of CmoCh10G011040 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 3.5e-84
Identity = 190/597 (31.83%), Postives = 309/597 (51.76%), Query Frame = 0


Query: 535  VVNEFMDVFPE-DLPGIP-PSREVDFGIDLEPGTGPISKAPYRMAPAELKELKIQLQDLL 594
            +  EF D+  E +   +P P + ++F ++L      +    Y + P +++ +  ++   L
Sbjct: 377  IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGL 436

Query: 595  DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLRGAT 654
              G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP IE L  +++G+T
Sbjct: 437  KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 496

Query: 655  VFSKIDLRSGYHQIKIKNEDIPKTAFRTRYGHYEFVVMSFGLTNAPAVFMELMNRVFKEC 714
            +F+K+DL+S YH I+++  D  K AFR   G +E++VM +G++ APA F   +N +  E 
Sbjct: 497  IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556

Query: 715  LDLFVIVFIDDILIYSKTDLEHQEHLRKALTILRENRLYAKFTKCEFWLRQVSFLGHVVS 774
             +  V+ ++DDILI+SK++ EH +H++  L  L+   L     KCEF   QV F+G+ +S
Sbjct: 557  KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616

Query: 775  KDGIFVDPNKIEAVTKWKRPTTVTEIRSFLGLAGYYRRFVQDFARIATPLTQLTKKGVPF 834
            + G       I+ V +WK+P    E+R FLG   Y R+F+   +++  PL  L KK V +
Sbjct: 617  EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676

Query: 835  VWDDTCEASFQELKQRLVSTPVLTVPEGSVGYAIYSDASKKGLGCVLMQHGK-----VVA 894
             W  T   + + +KQ LVS PVL   + S    + +DAS   +G VL Q         V 
Sbjct: 677  KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736

Query: 895  YASHQLKDYKKNYPTHDLELAAVVFTLKIWRHYLYG--EKTQIYTDHKSLKYLFTQKE-- 954
            Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +   
Sbjct: 737  YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 796

Query: 955  LNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKVVHSSAFITREPRVRTDFEQADIA 1014
             N R  RW   ++D++ +I Y PG AN +ADALSR V  +      EP +  D E   I 
Sbjct: 797  ENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDET------EP-IPKDSEDNSIN 856

Query: 1015 VVTKEVAAQIARLTVRPTLRQRIIDSQREDPSLSKILDQLAVGPVDGFTKSTDDGLLCQG 1074
             V         ++++    + +++     D  L  +L+       +       DGLL   
Sbjct: 857  FVN--------QISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENI--QLKDGLLINS 916

Query: 1075 R--LCVPPMSGIKNEILTEAHNSTFSIHPGGTKMYQDLKKHFWWRSMKKDIAELTQN 1119
            +  + +P  + +   I+ + H     IHPG   +   + + F W+ ++K I E  QN
Sbjct: 917  KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQN 956

[Close]

BLAST of CmoCh10G011040 vs. ExPASy TrEMBL
Match: A0A6J1EYH9 (Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111440131 PE=4 SV=1)

HSP 1 Score: 2078.5 bits (5384), Expect = 0.0e+00
Identity = 1030/1094 (94.15%), Postives = 1043/1094 (95.34%), Query Frame = 0


Query: 21   MATQPANAVATQPANAVATQPANAVAPQPVDAVAIQPVNNPHPNRGANWLKDFRRYNPRP 80
            MATQPANA+ATQPAN VATQPANAVAPQPVDAVAI PVNNPHP+RGANWLKDFRRYNPRP
Sbjct: 1    MATQPANAMATQPANYVATQPANAVAPQPVDAVAIPPVNNPHPDRGANWLKDFRRYNPRP 60

Query: 81   FVGSKEDPTAAQMWIANMETTFESMRCPDEHKVACATYVLQKDAEVWWSDNKQSINPGGG 140
            FVGSKEDPTAAQMWIANMETTFESMRCPDEHKV CATYVLQKDAEVWWSDNKQSINPGGG
Sbjct: 61   FVGSKEDPTAAQMWIANMETTFESMRCPDEHKVTCATYVLQKDAEVWWSDNKQSINPGGG 120

Query: 141  ITTWETFKEAFLKYYYPKETRIKKQQEFNHLTQGDRTVDQYDQDFMRLRRFAPSLADTEE 200
            ITTWETFKEAFLKYYYPKE RIKKQQEFN LTQGDRTVDQYDQDFMRLRRFAPSLADTEE
Sbjct: 121  ITTWETFKEAFLKYYYPKEIRIKKQQEFNLLTQGDRTVDQYDQDFMRLRRFAPSLADTEE 180

Query: 201  KQTEKFVLGLNPKTRRMLEAFNPKTYEEALRTAKALEEPPEEKKTEPTVATGRKRPVEVD 260
            KQTEKFVLGLNPKTRRMLEAFNPKTYEEALRTAKALEEPPEEKKTEPTVA GRKRPVEVD
Sbjct: 181  KQTEKFVLGLNPKTRRMLEAFNPKTYEEALRTAKALEEPPEEKKTEPTVAIGRKRPVEVD 240

Query: 261  TTEFQPPSQRPRYQNRPPAPPPIGRYLAMEKPLCRNCGKQHVGRCLAGSGMCYICGHAGH 320
            T EFQPPSQRPRYQ+RPPAPPPIGRYLAMEKPLCRNCGKQHVGRCLAGSGMCYICGHAGH
Sbjct: 241  TIEFQPPSQRPRYQSRPPAPPPIGRYLAMEKPLCRNCGKQHVGRCLAGSGMCYICGHAGH 300

Query: 321  VARTCPTKSPGFPREPLRGPVIREPTLQTRPQTKAYVTTGKEAGTSGTVVTGTLAILGHF 380
            VARTCPTKSPG PREPLRGPVIREPTLQT PQTKAYVTT  EAGTSGTVVTGTL+ILGHF
Sbjct: 301  VARTCPTKSPGIPREPLRGPVIREPTLQTSPQTKAYVTTSNEAGTSGTVVTGTLSILGHF 360

Query: 381  ALTLFDSGSTHSFVALPFVKQAGFVIEPLMHALSVGTPAGVDLVTKDRVRDGQVVIAGQT 440
            ALTLFDSGSTHSFVA PF+KQAGFVIEPLMHALSVGTPAGVDLVTKDRVRDGQVVIAGQT
Sbjct: 361  ALTLFDSGSTHSFVASPFIKQAGFVIEPLMHALSVGTPAGVDLVTKDRVRDGQVVIAGQT 420

Query: 441  IHVDLKVVDMTDFDVILGMDWLAENFATIDCHKKEVIFTPPNGLTFKFKGTSTGTTPKII 500
            IHVDLKVVDMTDFDVILGMDWLAENFATIDCHKKEVIFTPPNGLTFKFKGTSTGTTPKII
Sbjct: 421  IHVDLKVVDMTDFDVILGMDWLAENFATIDCHKKEVIFTPPNGLTFKFKGTSTGTTPKII 480

Query: 501  SMMKARRLIQQGGWAFLAYAVNTKGKEKPIDTIPVVNEFMDVFPEDLPGIPPSREVDFGI 560
            SMMKARRLIQQGGWAFLAYAVNTKGKEKPIDTIPVVNEFMDVFPEDLPGIPPSREVDFGI
Sbjct: 481  SMMKARRLIQQGGWAFLAYAVNTKGKEKPIDTIPVVNEFMDVFPEDLPGIPPSREVDFGI 540

Query: 561  DLEPGTGPISKAPYRMAPAELKELKIQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSMRL 620
            DLE GTGPISKAPYRMAPAELKELK QLQDLLD                    KD SMRL
Sbjct: 541  DLELGTGPISKAPYRMAPAELKELKTQLQDLLD--------------------KDDSMRL 600

Query: 621  CIDYRELNKRTVKNKYPLPRIEDLFDQLRGATVFSKIDLRSGYHQIKIKNEDIPKTAFRT 680
            CI YRELNKRTVKNKYPLPRIEDLFDQLRGATVFSKIDLRSGYHQIKIKNEDIPKTAFRT
Sbjct: 601  CIGYRELNKRTVKNKYPLPRIEDLFDQLRGATVFSKIDLRSGYHQIKIKNEDIPKTAFRT 660

Query: 681  RYGHYEFVVMSFGLTNAPAVFMELMNRVFKECLDLFVIVFIDDILIYSKTDLEHQEHLRK 740
            RYGHYEFVVMSFGLTNAPAVFMELMNRVFKECLDLFVIVFIDDILIYSKTDL+HQEHLRK
Sbjct: 661  RYGHYEFVVMSFGLTNAPAVFMELMNRVFKECLDLFVIVFIDDILIYSKTDLKHQEHLRK 720

Query: 741  ALTILRENRLYAKFTKCEFWLRQVSFLGHVVSKDGIFVDPNKIEAVTKWKRPTTVTEIRS 800
            ALTILREN+LYA FTKCEFW+ QVSFLGH+VSKDGIFVDPNKIEAVTK KRPTTVTEIRS
Sbjct: 721  ALTILRENKLYANFTKCEFWIXQVSFLGHIVSKDGIFVDPNKIEAVTKRKRPTTVTEIRS 780

Query: 801  FLGLAGYYRRFVQDFARIATPLTQLTKKGVPFVWDDTCEASFQELKQRLVSTPVLTVPEG 860
            FLGL GYYRRFV DFARIATPLTQLTKKGVPFVWDDTCE SFQELKQRLVS PVLTVPE 
Sbjct: 781  FLGLVGYYRRFVXDFARIATPLTQLTKKGVPFVWDDTCEVSFQELKQRLVSAPVLTVPES 840

Query: 861  SVGYAIYSDASKKGLGCVLMQHGKVVAYASHQLKDYKKNYPTHDLELAAVVFTLKIWRHY 920
            SVGYAIYSDASKKGLGCVLMQHGKVVAYASHQLKDY+KNYPTHDLELAAVVF LKIWRHY
Sbjct: 841  SVGYAIYSDASKKGLGCVLMQHGKVVAYASHQLKDYEKNYPTHDLELAAVVFALKIWRHY 900

Query: 921  LYGEKTQIYTDHKSLKYLFTQKELNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKV 980
             YGEKTQIYTDHKSLKYLFTQKELNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKV
Sbjct: 901  PYGEKTQIYTDHKSLKYLFTQKELNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKV 960

Query: 981  VHSSAFITREPRVRTDFEQADIAVVTKEVAAQIARLTVRPTLRQRIIDSQREDPSLSKIL 1040
            VHSSA ITREPR RTDFEQADI VVTKEVAAQ+AR+TVRPTLRQRIIDSQREDPSLSKIL
Sbjct: 961  VHSSALITREPRGRTDFEQADIVVVTKEVAAQLARMTVRPTLRQRIIDSQREDPSLSKIL 1020

Query: 1041 DQLAVGPVDGFTKSTDDGLLCQGRLCVPPMSGIKNEILTEAHNSTFSIHPGGTKMYQDLK 1100
            DQL VGPVDGFTKSTDDGLLCQGRLCVPP+SGIKNEILTEAHNS FSIHPGGTKMYQDLK
Sbjct: 1021 DQLEVGPVDGFTKSTDDGLLCQGRLCVPPLSGIKNEILTEAHNSAFSIHPGGTKMYQDLK 1074

Query: 1101 KHFWWRSMKKDIAE 1115
            KHFWWRSMKKDIAE
Sbjct: 1081 KHFWWRSMKKDIAE 1074

[Close]

BLAST of CmoCh10G011040 vs. ExPASy TrEMBL
Match: A0A6J1GK52 (Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111454654 PE=4 SV=1)

HSP 1 Score: 1595.9 bits (4131), Expect = 0.0e+00
Identity = 805/941 (85.55%), Postives = 824/941 (87.57%), Query Frame = 0


Query: 174  GDRTVDQYDQDFMRLRRFAPSLADTEEKQTEKFVLGLNPKTRRMLEAFNPKTYEEALRTA 233
            GDRTVDQYDQDFMRLRRFAPSL DT+EKQTEKFVLGLN KTRR+LEAFNPKTYEEALRTA
Sbjct: 135  GDRTVDQYDQDFMRLRRFAPSLTDTKEKQTEKFVLGLNLKTRRILEAFNPKTYEEALRTA 194

Query: 234  KALEEPPEEKKTEPTVATGRKRPVEVDTTEFQPPSQRPRYQNRPPAPPPIGRYLAMEKPL 293
            KALE+PPEEKKTEPTV T RKRPVEVDTTEFQPP QRPRYQ R P+PPPI RYLAMEKPL
Sbjct: 195  KALEKPPEEKKTEPTVTTRRKRPVEVDTTEFQPPFQRPRYQRRLPSPPPIVRYLAMEKPL 254

Query: 294  CRNCGKQHVGRCLAGSGMCYICGHAGHVARTCPTKSPGFPREPLRGPVIREPTLQTRPQT 353
            CRNCGKQHVGRCLAGSGMCYICGHAGHVARTCPTKSPG PREPLRGPVIREPTLQT PQT
Sbjct: 255  CRNCGKQHVGRCLAGSGMCYICGHAGHVARTCPTKSPGIPREPLRGPVIREPTLQTHPQT 314

Query: 354  KAYVTTGKEAGTSGTVVTGTLAILGHFALTLFDSGSTHSFVALPFVKQAGFVIEPLMHAL 413
            KAYVTT KEAGTSGTVVTGTL+ILGHFALTLF+S STHSFVALPFVKQAGFV+EPLMHAL
Sbjct: 315  KAYVTTSKEAGTSGTVVTGTLSILGHFALTLFNSSSTHSFVALPFVKQAGFVVEPLMHAL 374

Query: 414  SVGTPAGVDLVTKDRVRDGQVVIAGQTIHVDLKVVDMTDFDVILGMDWLAENFATIDCHK 473
            SVGTPAGVDLVTK+RV+DGQVVIAGQTIH+DLKVVDM  FD ILGMDWLAENFATIDCHK
Sbjct: 375  SVGTPAGVDLVTKNRVKDGQVVIAGQTIHIDLKVVDMRXFDFILGMDWLAENFATIDCHK 434

Query: 474  KEVIFTPPNGLTFKFKGTSTGTTPKIISMMKARRLIQQGGWAFLAYAVNTKGKEKPIDTI 533
            KEVIFTPPN LTFKFKGTSTGTTPKIISMMKARRLIQQG  AFLA AVNTKGKEKPIDT+
Sbjct: 435  KEVIFTPPNRLTFKFKGTSTGTTPKIISMMKARRLIQQGRKAFLACAVNTKGKEKPIDTV 494

Query: 534  PVVNEFMDVFPEDLPGIPPSREVDFGIDLEPGTGPISKAPYRMAPAELKELKIQLQDLLD 593
            PVVNEFMDVFPEDLPGIPPS+EVDFGIDLEP TGPISKAPYRMAPAELKELK QLQDLLD
Sbjct: 495  PVVNEFMDVFPEDLPGIPPSQEVDFGIDLEPRTGPISKAPYRMAPAELKELKTQLQDLLD 554

Query: 594  KGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLRGATV 653
            KGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLRGATV
Sbjct: 555  KGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLRGATV 614

Query: 654  FSKIDLRSGYHQIKIKNEDIPKTAFRTRYGHYEFVVMSFGLTNAPAVFMELMNRVFKECL 713
            FSKIDLR GYHQIKIKNEDIPKTAFRTRYGHYEFVVMSFGLTNAPAVFMELMNRVFKECL
Sbjct: 615  FSKIDLRLGYHQIKIKNEDIPKTAFRTRYGHYEFVVMSFGLTNAPAVFMELMNRVFKECL 674

Query: 714  DLFVIVFIDDILIYSKTDLEHQEHLRKALTILRENRLYAKFTKCEFWLRQVSFLGHVVSK 773
            D FVIVFIDDILIYSKTDLEHQEHLRKALTILREN+LYAKFT+CEFWLRQVSFLGHVVSK
Sbjct: 675  DSFVIVFIDDILIYSKTDLEHQEHLRKALTILRENKLYAKFTECEFWLRQVSFLGHVVSK 734

Query: 774  DGIFVDPNKIEAVTKWKRPTTVTEIRSFLGLAGYYRRFVQDFARIATPLTQLTKKGVPFV 833
             GIFVDPNKIEAVTKWKRPTTVTEIRSFLGLAGYYRRFVQDFARIATPLTQLTKKGVPFV
Sbjct: 735  YGIFVDPNKIEAVTKWKRPTTVTEIRSFLGLAGYYRRFVQDFARIATPLTQLTKKGVPFV 794

Query: 834  WDDTCEASFQELKQRLVSTPVLTVPEGSVGYAIYSDASKKGLGCVLMQHGKVVAYASHQL 893
            WDDTCEASFQELKQRLVS PVLTVPE SVGY IYSDASKKGLGCVLMQHGKVVAYAS QL
Sbjct: 795  WDDTCEASFQELKQRLVSAPVLTVPESSVGYVIYSDASKKGLGCVLMQHGKVVAYASRQL 854

Query: 894  KDYKKNYPTHDLELAAVVFTLKIWRHYLYGEKTQIYTDHKSLKYLFTQKELNMRQRRWLE 953
             DY+KNYPTHDLELAAVVF LKIWRHYLYGE +QIYTDHKSLKYLFTQKELNMRQR+WLE
Sbjct: 855  XDYEKNYPTHDLELAAVVFALKIWRHYLYGENSQIYTDHKSLKYLFTQKELNMRQRKWLE 914

Query: 954  LVKDYDIDIQYHPGKANVVADALSRKVVHSSAFITREPRVRTDFEQADIAVVTKEVAAQI 1013
            LVKDYDIDIQYHPGKANVVADALSRKVVHSSA ITREPRVRTDFEQADIA          
Sbjct: 915  LVKDYDIDIQYHPGKANVVADALSRKVVHSSALITREPRVRTDFEQADIA---------- 974

Query: 1014 ARLTVRPTLRQRIIDSQREDPSLSKILDQLAVGPVDGFTKSTDDGLLCQGRLCVPPMSGI 1073
                                                                        
Sbjct: 975  ------------------------------------------------------------ 991

Query: 1074 KNEILTEAHNSTFSIHPGGTKMYQDLKKHFWWRSMKKDIAE 1115
                          I+P GTKMYQDLK+HFWWRSMKKDIAE
Sbjct: 1035 --------------IYPSGTKMYQDLKQHFWWRSMKKDIAE 991

[Close]

BLAST of CmoCh10G011040 vs. ExPASy TrEMBL
Match: A0A6J1GK52 (Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111454654 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 1.5e+00
Identity = 26/28 (92.86%), Postives = 26/28 (92.86%), Query Frame = 0


Query: 1   MQTMLDTQQATLLATQQVAAMATQPANA 29
           MQTMLDTQQATLLATQQV  MATQPANA
Sbjct: 87  MQTMLDTQQATLLATQQVTGMATQPANA 114

HSP 2 Score: 1286.6 bits (3328), Expect = 0.0e+00
Identity = 655/1090 (60.09%), Postives = 802/1090 (73.58%), Query Frame = 0


Query: 33   PANAVATQPANAVAPQPVDAVAIQPVNNPHPNRGANWLKDFRRYNPRPFVGSKEDPTAAQ 92
            PA A A  P  A AP PV  VA Q V +   +  A  L+DFR+YNP  F GS EDPT AQ
Sbjct: 298  PAPAPAPAPVPAPAPAPV-PVAPQFVPD-QLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ 357

Query: 93   MWIANMETTFESMRCPDEHKVACATYVLQKDAEVWWSDNKQSINPGGGITTWETFKEAFL 152
            MW++++ET F  M+CP++ KV CA ++L      WW   ++ +       TW+ FKE+F 
Sbjct: 358  MWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFY 417

Query: 153  KYYYPKETRIKKQQEFNHLTQGDRTVDQYDQDFMRLRRFAPSLADTEEKQTEKFVLGLNP 212
              ++    R  K+QEF +L QGD TV+QYD +F  L RFAP +  TE  + +KFV GL  
Sbjct: 418  AKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRL 477

Query: 213  KTRRMLEAFNPKTYEEALRTA--KALEEPPEEKKTEPTVAT-GRKR-----PVEVDTTEF 272
              + ++ AF P T+ +ALR A   +L+E     KT    +T G+KR     PV V    F
Sbjct: 478  DIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNF 537

Query: 273  QPPSQRPRYQNRPPAPPPIGRYLAMEKPLCRNCGKQHVGRCLAGSGMCYICGHAGHVART 332
            +P  +   +Q +P       R     KPLC  CGK H+GRCL G+  C+ C   GH A  
Sbjct: 538  RPGGEFRSFQQKPFEAGEAAR----GKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADR 597

Query: 333  CPTKSPGFPREPLRGPVIREPTLQTRPQTKAYVTTGKEAGTSGTVVTGTLAILGHFALTL 392
            CP +  G  +    G            Q + + T   EA  +GTVVTGTL +LGH+AL L
Sbjct: 598  CPLRLTGIAQNQGAG---------APHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVL 657

Query: 393  FDSGSTHSFVALPFVKQAGFVIEPLMHALSVGTPAGVDLVTKDRVRDGQVVIAGQTIHVD 452
            FDSGS+HSF++  FV  A   +EPL H LSV TP+G  +++K++V+  Q+ IAG  I V 
Sbjct: 658  FDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT 717

Query: 453  LKVVDMTDFDVILGMDWLAENFATIDCHKKEVIFTPPNGLTFKFKGTSTGTTPKIISMMK 512
            L V+DM DFDVILGMDWLA N A+IDC +KEV F PP+  +FKFKG  + + P++IS ++
Sbjct: 718  LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIR 777

Query: 513  ARRLIQQGGWAFLAYAVNTKGKEKPIDTIPVVNEFMDVFPEDLPGIPPSREVDFGIDLEP 572
            A +L+ QG W  LA  V+T+  +  + + PVV ++ DVFPE+LPG+PP REV+F I+LEP
Sbjct: 778  ASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEP 837

Query: 573  GTGPISKAPYRMAPAELKELKIQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDY 632
            GT PIS+APYRMAPAELKELK+QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDY
Sbjct: 838  GTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDY 897

Query: 633  RELNKRTVKNKYPLPRIEDLFDQLRGATVFSKIDLRSGYHQIKIKNEDIPKTAFRTRYGH 692
            RELNK TVKN+YPLPRI+DLFDQL+GATVFSKIDLRSGYHQ++IK+ED+PKTAFR+RYGH
Sbjct: 898  RELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGH 957

Query: 693  YEFVVMSFGLTNAPAVFMELMNRVFKECLDLFVIVFIDDILIYSKTDLEHQEHLRKALTI 752
            YEF+VMSFGLTNAPAVFM+LMNRVF+E LD FVIVFIDDILIYSKT+ EH+EHLR  L  
Sbjct: 958  YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQT 1017

Query: 753  LRENRLYAKFTKCEFWLRQVSFLGHVVSKDGIFVDPNKIEAVTKWKRPTTVTEIRSFLGL 812
            LR+N+LYAKF+KCEFWL+QVSFLGHVVSK G+ VDP KIEAVT W RP+TV+E+RSFLGL
Sbjct: 1018 LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL 1077

Query: 813  AGYYRRFVQDFARIATPLTQLTKKGVPFVWDDTCEASFQELKQRLVSTPVLTVPEGSVGY 872
            AGYYRRFV++F+RIATPLTQLT+KG PFVW   CE SFQ LKQ+LV+ PVLTVP+GS  +
Sbjct: 1078 AGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSF 1137

Query: 873  AIYSDASKKGLGCVLMQHGKVVAYASHQLKDYKKNYPTHDLELAAVVFTLKIWRHYLYGE 932
             IYSDASKKGLGCVLMQ GKVVAYAS QLK +++NYPTHDLELAAVVF LKIWRHYLYGE
Sbjct: 1138 VIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE 1197

Query: 933  KTQIYTDHKSLKYLFTQKELNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKVVHSS 992
            K QI+TDHKSLKY FTQKELNMRQRRWLELVKDYD +I YHPGKANVVADALSRKV HS+
Sbjct: 1198 KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSA 1257

Query: 993  AFITREPRVRTDFEQADIAVVTKEVAAQIARLTVRPTLRQRIIDSQREDPSLSKILDQLA 1052
            A ITR+  +  D E+A+IAV    V  Q+A+LTV+PTLRQRIID+Q  DP L +      
Sbjct: 1258 ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAE 1317

Query: 1053 VGPVDGFTKSTDDGLLCQGRLCVPPMSGIKNEILTEAHNSTFSIHPGGTKMYQDLKKHFW 1112
             G    F+ S+D GLL + RLCVP  S +K E+L+EAH+S FS+HPG TKMYQDLK+ +W
Sbjct: 1318 AGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 1372

Query: 1113 WRSMKKDIAE 1115
            WR+MK+++AE
Sbjct: 1378 WRNMKREVAE 1372

[Close]

BLAST of CmoCh10G011040 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 1281.2 bits (3314), Expect = 0.0e+00
Identity = 653/1087 (60.07%), Postives = 799/1087 (73.51%), Query Frame = 0


Query: 41   PANAVAPQPVDAVAIQPVNNPH--PNR---GANWLKDFRRYNPRPFVGSKEDPTAAQMWI 100
            PA A AP P  A A  PV  PH  P++    A  L+DFR+YNP  F GS EDPT AQMW+
Sbjct: 80   PAPAPAPAPAPAPAPVPV-APHFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWL 139

Query: 101  ANMETTFESMRCPDEHKVACATYVLQKDAEVWWSDNKQSINPGGGITTWETFKEAFLKYY 160
            +++ET F  M+CP++ KV CA ++L      WW   ++ +       TW+ FKE+F   +
Sbjct: 140  SSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKF 199

Query: 161  YPKETRIKKQQEFNHLTQGDRTVDQYDQDFMRLRRFAPSLADTEEKQTEKFVLGLNPKTR 220
            +    R  K+QEF +L QGD TV+QYD +F  L RFAP +  TE  + +KFV GL    +
Sbjct: 200  FSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVTGLRLDIQ 259

Query: 221  RMLEAFNPKTYEEALRTA--KALEEPPEEKKTEPTVAT-GRKR-----PVEVDTTEFQPP 280
             ++ AF P T+ +ALR A   +L+E     KT    +T G+KR     PV V    F+  
Sbjct: 260  GLVRAFRPATHADALRLAVDLSLQEKANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRSG 319

Query: 281  SQRPRYQNRPPAPPPIGRYLAMEKPLCRNCGKQHVGRCLAGSGMCYICGHAGHVARTCPT 340
             +  R+Q +P       R     KPLC  CGK H+G CL G+  C+ C    H A  CP 
Sbjct: 320  GEFRRFQQKPFEAGEAAR----GKPLCTTCGKHHLGHCLFGTRTCFKCRQEVHTADRCPL 379

Query: 341  KSPGFPREPLRGPVIREPTLQTRPQTKAYVTTGKEAGTSGTVVTGTLAILGHFALTLFDS 400
            +  G  +    G            Q + + T   EA  +GTVVTGTL ++GH+AL LFDS
Sbjct: 380  RLTGNAQNQGAG---------APHQGRVFATNKTEAEKAGTVVTGTLPVMGHYALVLFDS 439

Query: 401  GSTHSFVALPFVKQAGFVIEPLMHALSVGTPAGVDLVTKDRVRDGQVVIAGQTIHVDLKV 460
            GS+HSF++  FV  A   +EPL H LSV TP+G  +++K++V+  Q+ IAG  I V L V
Sbjct: 440  GSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIV 499

Query: 461  VDMTDFDVILGMDWLAENFATIDCHKKEVIFTPPNGLTFKFKGTSTGTTPKIISMMKARR 520
            +DM DFDVILGMDWLA N A+IDC +KEV F PP+  +FKFKG  + + P++IS ++A +
Sbjct: 500  LDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASK 559

Query: 521  LIQQGGWAFLAYAVNTKGKEKPIDTIPVVNEFMDVFPEDLPGIPPSREVDFGIDLEPGTG 580
            L+ QG W  LA  V+T+  +  +   PVV ++ DVFPE+LPG+PP REV+F I+LEPGT 
Sbjct: 560  LLSQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTV 619

Query: 581  PISKAPYRMAPAELKELKIQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYREL 640
            PIS+APYRMAPAELKELK+QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYREL
Sbjct: 620  PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYREL 679

Query: 641  NKRTVKNKYPLPRIEDLFDQLRGATVFSKIDLRSGYHQIKIKNEDIPKTAFRTRYGHYEF 700
            NK TVKN+YPLPRI+DLFDQL+GATVFSKIDLRSGYHQ++IK+ED+PKTAFR+RYGHYEF
Sbjct: 680  NKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEF 739

Query: 701  VVMSFGLTNAPAVFMELMNRVFKECLDLFVIVFIDDILIYSKTDLEHQEHLRKALTILRE 760
            +VMSFGLTNAPAVFM+LMNRVF+E LD FVIVFIDDILIYSKT++EH+EHLR  L  LR+
Sbjct: 740  IVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRD 799

Query: 761  NRLYAKFTKCEFWLRQVSFLGHVVSKDGIFVDPNKIEAVTKWKRPTTVTEIRSFLGLAGY 820
            N+LYAKF KCEFWL+QVSFLGHVVSK G+ VDP KIEAVT W RP+TV+E+RSFLGLAGY
Sbjct: 800  NKLYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGY 859

Query: 821  YRRFVQDFARIATPLTQLTKKGVPFVWDDTCEASFQELKQRLVSTPVLTVPEGSVGYAIY 880
            YRRFV++F+RIATPLTQLT+KG PFVW   CE SFQ LKQ+LV+ PVLTVP+GS  + IY
Sbjct: 860  YRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIY 919

Query: 881  SDASKKGLGCVLMQHGKVVAYASHQLKDYKKNYPTHDLELAAVVFTLKIWRHYLYGEKTQ 940
            SDASKKGLGCVLMQ GKVVAYAS QLK +++NYPTHDLELAAVVF LKIWRHYLYGEK Q
Sbjct: 920  SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ 979

Query: 941  IYTDHKSLKYLFTQKELNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKVVHSSAFI 1000
            I+TDHKSLKY FTQKELNMRQRRWLELVKDYD +I YHPGKANVVADALSRKV HS+A I
Sbjct: 980  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALI 1039

Query: 1001 TREPRVRTDFEQADIAVVTKEVAAQIARLTVRPTLRQRIIDSQREDPSLSKILDQLAVGP 1060
            TR+  +  D E+A+IAV    V  Q+A+LTV+PTLRQRIID+Q  DP L +      VG 
Sbjct: 1040 TRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEVGQ 1099

Query: 1061 VDGFTKSTDDGLLCQGRLCVPPMSGIKNEILTEAHNSTFSIHPGGTKMYQDLKKHFWWRS 1115
               F+ S+D GLL + RLCVP  S IK E+L+EAH+S FS+HPG TKMYQDLK+ +WWR+
Sbjct: 1100 AVEFSLSSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRN 1152

[Close]

BLAST of CmoCh10G011040 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1)

HSP 1 Score: 1278.5 bits (3307), Expect = 0.0e+00
Identity = 660/1118 (59.03%), Postives = 802/1118 (71.74%), Query Frame = 0


Query: 2    QTMLDTQQATLLATQQVAAMATQPANAVATQPANAVATQPANAVAPQPVDAVAIQPVNNP 61
            Q ML    A  LA QQ  A   Q   A A   A  V  Q     AP+    V +Q     
Sbjct: 51   QDMLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQ----- 110

Query: 62   HPNRGANWLKDFRRYNPRPFVGSKEDPTAAQMWIANMETTFESMRCPDEHKVACATYVLQ 121
              +  A  L+DFR+YNP+ F GS ++PT AQMW+ ++ET F  M+CP++ KV CA + L+
Sbjct: 111  -LSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLE 170

Query: 122  KDAEVWWSDNKQSINPGGGITTWETFKEAFLKYYYPKETRIKKQQEFNHLTQGDRTVDQY 181
                 WW   ++ +       TWE FKE F   ++    +  K QEF +L QGD TV+QY
Sbjct: 171  DRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQY 230

Query: 182  DQDFMRLRRFAPSLADTEEKQTEKFVLGLNPKTRRMLEAFNPKTYEEALRTAKALEEPPE 241
            D +F  L RFAP +   E  +TEKFV GL    + ++ A  P T+ +ALR A  L  P  
Sbjct: 231  DAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPER 290

Query: 242  ---EKKTEPTVATGRKRPVEVDTTEFQPPSQRPR--YQNRPPAPPPIGRYLAMEKPLCRN 301
                K      A G+KR VE         + R    +Q         GR L  E P C  
Sbjct: 291  ADASKAAGRGSALGQKRKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTL-RELPACTT 350

Query: 302  CGKQHVGRCLAGSGMCYICGHAGHVARTCPTKSPGFPREPLRGPVIREPTLQTRPQTKAY 361
            CG+ H GRCLAGSG+C+ C   GH A  CP K   F   P        P      Q + +
Sbjct: 351  CGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKP--FETTP--------PQPSAAQQGRVF 410

Query: 362  VTTGKEAGTSGTVVTGTLAILGHFALTLFDSGSTHSFVALPFVKQAGFVIEPLMHALSVG 421
             TT +EA  +GTVVTGTL ILGH+A  LFDSGS+HSF++  FV+  G  +EPL   LSV 
Sbjct: 411  ATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVS 470

Query: 422  TPAGVDLVTKDRVRDGQVVIAGQTIHVDLKVVDMTDFDVILGMDWLAENFATIDCHKKEV 481
            TP+G  L++K++++  +V IA + + V L V+DM DFDVILGMDWL+ N A IDC+ KEV
Sbjct: 471  TPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEV 530

Query: 482  IFTPPNGLTFKFKGTSTGTTPKIISMMKARRLIQQGGWAFLAYAVNTKGKEKPIDTIPVV 541
            +F PP+  +FKF+G      PK+IS MKA +L+ QG W  LA  V+ +  E  + + PVV
Sbjct: 531  VFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV 590

Query: 542  NEFMDVFPEDLPGIPPSREVDFGIDLEPGTGPISKAPYRMAPAELKELKIQLQDLLDKGF 601
             E+ DVFP++LPG+PP REVDF I+LEPGT PIS+APYRMAPAELKELK+QLQ+LLDKGF
Sbjct: 591  REYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGF 650

Query: 602  IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLRGATVFSK 661
            IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK TVKN+YPLPRI+DLFDQL+GATVFSK
Sbjct: 651  IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 710

Query: 662  IDLRSGYHQIKIKNEDIPKTAFRTRYGHYEFVVMSFGLTNAPAVFMELMNRVFKECLDLF 721
            IDLRSGYHQ++I++ DIPKTAFR+RYGHYEFVVMSFGLTNAPAVFM+LMNRVFKE LD F
Sbjct: 711  IDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSF 770

Query: 722  VIVFIDDILIYSKTDLEHQEHLRKALTILRENRLYAKFTKCEFWLRQVSFLGHVVSKDGI 781
            VIVFIDDILIYSKT+ EH+EHL + L  LR N+LYAKF+KCEFWLR+V+FLGHVVS +G+
Sbjct: 771  VIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGV 830

Query: 782  FVDPNKIEAVTKWKRPTTVTEIRSFLGLAGYYRRFVQDFARIATPLTQLTKKGVPFVWDD 841
             VDP KIEAVT W RP+TV+EIRSFLGLAGYYRRFV+DF+RIA+PLTQLT+KG PFVW  
Sbjct: 831  SVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP 890

Query: 842  TCEASFQELKQRLVSTPVLTVPEGSVGYAIYSDASKKGLGCVLMQHGKVVAYASHQLKDY 901
             CE SFQELKQ+LV+ PVLTVP+GS  + IYSDASKKGLGCVLMQ GKVVAYAS QLK +
Sbjct: 891  ACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIH 950

Query: 902  KKNYPTHDLELAAVVFTLKIWRHYLYGEKTQIYTDHKSLKYLFTQKELNMRQRRWLELVK 961
            ++NYPTHDLELAAVVF LKIWRHYLYGEK QIYTDHKSLKY FTQKELNMRQRRWLELVK
Sbjct: 951  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVK 1010

Query: 962  DYDIDIQYHPGKANVVADALSRKVVHSSAFITREPRVRTDFEQADIAVVTKEVAAQIARL 1021
            DYD +I YHPGKANVVADALSRKV HS+A IT++  +  DFE+A+IAV   EV AQ+A+L
Sbjct: 1011 DYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQL 1070

Query: 1022 TVRPTLRQRIIDSQREDPSLSKILDQLAVGPVDGFTKSTDDGLLCQGRLCVPPMSGIKNE 1081
            TV+PTLRQ+II +Q +DP L++    +     +GF+ S+DDGL+ +GRLCVP  S +K E
Sbjct: 1071 TVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTE 1130

Query: 1082 ILTEAHNSTFSIHPGGTKMYQDLKKHFWWRSMKKDIAE 1115
            +LTEAH+S F++HPG TKMYQDL+  +WWR MK+D+A+
Sbjct: 1131 LLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAD 1151

[Close]

BLAST of CmoCh10G011040 vs. NCBI nr
Match: XP_022933231.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111440131 [Cucurbita moschata])

HSP 1 Score: 2078.5 bits (5384), Expect = 0.0e+00
Identity = 1030/1094 (94.15%), Postives = 1043/1094 (95.34%), Query Frame = 0


Query: 21   MATQPANAVATQPANAVATQPANAVAPQPVDAVAIQPVNNPHPNRGANWLKDFRRYNPRP 80
            MATQPANA+ATQPAN VATQPANAVAPQPVDAVAI PVNNPHP+RGANWLKDFRRYNPRP
Sbjct: 1    MATQPANAMATQPANYVATQPANAVAPQPVDAVAIPPVNNPHPDRGANWLKDFRRYNPRP 60

Query: 81   FVGSKEDPTAAQMWIANMETTFESMRCPDEHKVACATYVLQKDAEVWWSDNKQSINPGGG 140
            FVGSKEDPTAAQMWIANMETTFESMRCPDEHKV CATYVLQKDAEVWWSDNKQSINPGGG
Sbjct: 61   FVGSKEDPTAAQMWIANMETTFESMRCPDEHKVTCATYVLQKDAEVWWSDNKQSINPGGG 120

Query: 141  ITTWETFKEAFLKYYYPKETRIKKQQEFNHLTQGDRTVDQYDQDFMRLRRFAPSLADTEE 200
            ITTWETFKEAFLKYYYPKE RIKKQQEFN LTQGDRTVDQYDQDFMRLRRFAPSLADTEE
Sbjct: 121  ITTWETFKEAFLKYYYPKEIRIKKQQEFNLLTQGDRTVDQYDQDFMRLRRFAPSLADTEE 180

Query: 201  KQTEKFVLGLNPKTRRMLEAFNPKTYEEALRTAKALEEPPEEKKTEPTVATGRKRPVEVD 260
            KQTEKFVLGLNPKTRRMLEAFNPKTYEEALRTAKALEEPPEEKKTEPTVA GRKRPVEVD
Sbjct: 181  KQTEKFVLGLNPKTRRMLEAFNPKTYEEALRTAKALEEPPEEKKTEPTVAIGRKRPVEVD 240

Query: 261  TTEFQPPSQRPRYQNRPPAPPPIGRYLAMEKPLCRNCGKQHVGRCLAGSGMCYICGHAGH 320
            T EFQPPSQRPRYQ+RPPAPPPIGRYLAMEKPLCRNCGKQHVGRCLAGSGMCYICGHAGH
Sbjct: 241  TIEFQPPSQRPRYQSRPPAPPPIGRYLAMEKPLCRNCGKQHVGRCLAGSGMCYICGHAGH 300

Query: 321  VARTCPTKSPGFPREPLRGPVIREPTLQTRPQTKAYVTTGKEAGTSGTVVTGTLAILGHF 380
            VARTCPTKSPG PREPLRGPVIREPTLQT PQTKAYVTT  EAGTSGTVVTGTL+ILGHF
Sbjct: 301  VARTCPTKSPGIPREPLRGPVIREPTLQTSPQTKAYVTTSNEAGTSGTVVTGTLSILGHF 360

Query: 381  ALTLFDSGSTHSFVALPFVKQAGFVIEPLMHALSVGTPAGVDLVTKDRVRDGQVVIAGQT 440
            ALTLFDSGSTHSFVA PF+KQAGFVIEPLMHALSVGTPAGVDLVTKDRVRDGQVVIAGQT
Sbjct: 361  ALTLFDSGSTHSFVASPFIKQAGFVIEPLMHALSVGTPAGVDLVTKDRVRDGQVVIAGQT 420

Query: 441  IHVDLKVVDMTDFDVILGMDWLAENFATIDCHKKEVIFTPPNGLTFKFKGTSTGTTPKII 500
            IHVDLKVVDMTDFDVILGMDWLAENFATIDCHKKEVIFTPPNGLTFKFKGTSTGTTPKII
Sbjct: 421  IHVDLKVVDMTDFDVILGMDWLAENFATIDCHKKEVIFTPPNGLTFKFKGTSTGTTPKII 480

Query: 501  SMMKARRLIQQGGWAFLAYAVNTKGKEKPIDTIPVVNEFMDVFPEDLPGIPPSREVDFGI 560
            SMMKARRLIQQGGWAFLAYAVNTKGKEKPIDTIPVVNEFMDVFPEDLPGIPPSREVDFGI
Sbjct: 481  SMMKARRLIQQGGWAFLAYAVNTKGKEKPIDTIPVVNEFMDVFPEDLPGIPPSREVDFGI 540

Query: 561  DLEPGTGPISKAPYRMAPAELKELKIQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSMRL 620
            DLE GTGPISKAPYRMAPAELKELK QLQDLLD                    KD SMRL
Sbjct: 541  DLELGTGPISKAPYRMAPAELKELKTQLQDLLD--------------------KDDSMRL 600

Query: 621  CIDYRELNKRTVKNKYPLPRIEDLFDQLRGATVFSKIDLRSGYHQIKIKNEDIPKTAFRT 680
            CI YRELNKRTVKNKYPLPRIEDLFDQLRGATVFSKIDLRSGYHQIKIKNEDIPKTAFRT
Sbjct: 601  CIGYRELNKRTVKNKYPLPRIEDLFDQLRGATVFSKIDLRSGYHQIKIKNEDIPKTAFRT 660

Query: 681  RYGHYEFVVMSFGLTNAPAVFMELMNRVFKECLDLFVIVFIDDILIYSKTDLEHQEHLRK 740
            RYGHYEFVVMSFGLTNAPAVFMELMNRVFKECLDLFVIVFIDDILIYSKTDL+HQEHLRK
Sbjct: 661  RYGHYEFVVMSFGLTNAPAVFMELMNRVFKECLDLFVIVFIDDILIYSKTDLKHQEHLRK 720

Query: 741  ALTILRENRLYAKFTKCEFWLRQVSFLGHVVSKDGIFVDPNKIEAVTKWKRPTTVTEIRS 800
            ALTILREN+LYA FTKCEFW+ QVSFLGH+VSKDGIFVDPNKIEAVTK KRPTTVTEIRS
Sbjct: 721  ALTILRENKLYANFTKCEFWIXQVSFLGHIVSKDGIFVDPNKIEAVTKRKRPTTVTEIRS 780

Query: 801  FLGLAGYYRRFVQDFARIATPLTQLTKKGVPFVWDDTCEASFQELKQRLVSTPVLTVPEG 860
            FLGL GYYRRFV DFARIATPLTQLTKKGVPFVWDDTCE SFQELKQRLVS PVLTVPE 
Sbjct: 781  FLGLVGYYRRFVXDFARIATPLTQLTKKGVPFVWDDTCEVSFQELKQRLVSAPVLTVPES 840

Query: 861  SVGYAIYSDASKKGLGCVLMQHGKVVAYASHQLKDYKKNYPTHDLELAAVVFTLKIWRHY 920
            SVGYAIYSDASKKGLGCVLMQHGKVVAYASHQLKDY+KNYPTHDLELAAVVF LKIWRHY
Sbjct: 841  SVGYAIYSDASKKGLGCVLMQHGKVVAYASHQLKDYEKNYPTHDLELAAVVFALKIWRHY 900

Query: 921  LYGEKTQIYTDHKSLKYLFTQKELNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKV 980
             YGEKTQIYTDHKSLKYLFTQKELNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKV
Sbjct: 901  PYGEKTQIYTDHKSLKYLFTQKELNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKV 960

Query: 981  VHSSAFITREPRVRTDFEQADIAVVTKEVAAQIARLTVRPTLRQRIIDSQREDPSLSKIL 1040
            VHSSA ITREPR RTDFEQADI VVTKEVAAQ+AR+TVRPTLRQRIIDSQREDPSLSKIL
Sbjct: 961  VHSSALITREPRGRTDFEQADIVVVTKEVAAQLARMTVRPTLRQRIIDSQREDPSLSKIL 1020

Query: 1041 DQLAVGPVDGFTKSTDDGLLCQGRLCVPPMSGIKNEILTEAHNSTFSIHPGGTKMYQDLK 1100
            DQL VGPVDGFTKSTDDGLLCQGRLCVPP+SGIKNEILTEAHNS FSIHPGGTKMYQDLK
Sbjct: 1021 DQLEVGPVDGFTKSTDDGLLCQGRLCVPPLSGIKNEILTEAHNSAFSIHPGGTKMYQDLK 1074

Query: 1101 KHFWWRSMKKDIAE 1115
            KHFWWRSMKKDIAE
Sbjct: 1081 KHFWWRSMKKDIAE 1074

[Close]

BLAST of CmoCh10G011040 vs. NCBI nr
Match: XP_022951914.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111454654 [Cucurbita moschata])

HSP 1 Score: 1595.9 bits (4131), Expect = 0.0e+00
Identity = 805/941 (85.55%), Postives = 824/941 (87.57%), Query Frame = 0


Query: 174  GDRTVDQYDQDFMRLRRFAPSLADTEEKQTEKFVLGLNPKTRRMLEAFNPKTYEEALRTA 233
            GDRTVDQYDQDFMRLRRFAPSL DT+EKQTEKFVLGLN KTRR+LEAFNPKTYEEALRTA
Sbjct: 135  GDRTVDQYDQDFMRLRRFAPSLTDTKEKQTEKFVLGLNLKTRRILEAFNPKTYEEALRTA 194

Query: 234  KALEEPPEEKKTEPTVATGRKRPVEVDTTEFQPPSQRPRYQNRPPAPPPIGRYLAMEKPL 293
            KALE+PPEEKKTEPTV T RKRPVEVDTTEFQPP QRPRYQ R P+PPPI RYLAMEKPL
Sbjct: 195  KALEKPPEEKKTEPTVTTRRKRPVEVDTTEFQPPFQRPRYQRRLPSPPPIVRYLAMEKPL 254

Query: 294  CRNCGKQHVGRCLAGSGMCYICGHAGHVARTCPTKSPGFPREPLRGPVIREPTLQTRPQT 353
            CRNCGKQHVGRCLAGSGMCYICGHAGHVARTCPTKSPG PREPLRGPVIREPTLQT PQT
Sbjct: 255  CRNCGKQHVGRCLAGSGMCYICGHAGHVARTCPTKSPGIPREPLRGPVIREPTLQTHPQT 314

Query: 354  KAYVTTGKEAGTSGTVVTGTLAILGHFALTLFDSGSTHSFVALPFVKQAGFVIEPLMHAL 413
            KAYVTT KEAGTSGTVVTGTL+ILGHFALTLF+S STHSFVALPFVKQAGFV+EPLMHAL
Sbjct: 315  KAYVTTSKEAGTSGTVVTGTLSILGHFALTLFNSSSTHSFVALPFVKQAGFVVEPLMHAL 374

Query: 414  SVGTPAGVDLVTKDRVRDGQVVIAGQTIHVDLKVVDMTDFDVILGMDWLAENFATIDCHK 473
            SVGTPAGVDLVTK+RV+DGQVVIAGQTIH+DLKVVDM  FD ILGMDWLAENFATIDCHK
Sbjct: 375  SVGTPAGVDLVTKNRVKDGQVVIAGQTIHIDLKVVDMRXFDFILGMDWLAENFATIDCHK 434

Query: 474  KEVIFTPPNGLTFKFKGTSTGTTPKIISMMKARRLIQQGGWAFLAYAVNTKGKEKPIDTI 533
            KEVIFTPPN LTFKFKGTSTGTTPKIISMMKARRLIQQG  AFLA AVNTKGKEKPIDT+
Sbjct: 435  KEVIFTPPNRLTFKFKGTSTGTTPKIISMMKARRLIQQGRKAFLACAVNTKGKEKPIDTV 494

Query: 534  PVVNEFMDVFPEDLPGIPPSREVDFGIDLEPGTGPISKAPYRMAPAELKELKIQLQDLLD 593
            PVVNEFMDVFPEDLPGIPPS+EVDFGIDLEP TGPISKAPYRMAPAELKELK QLQDLLD
Sbjct: 495  PVVNEFMDVFPEDLPGIPPSQEVDFGIDLEPRTGPISKAPYRMAPAELKELKTQLQDLLD 554

Query: 594  KGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLRGATV 653
            KGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLRGATV
Sbjct: 555  KGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLRGATV 614

Query: 654  FSKIDLRSGYHQIKIKNEDIPKTAFRTRYGHYEFVVMSFGLTNAPAVFMELMNRVFKECL 713
            FSKIDLR GYHQIKIKNEDIPKTAFRTRYGHYEFVVMSFGLTNAPAVFMELMNRVFKECL
Sbjct: 615  FSKIDLRLGYHQIKIKNEDIPKTAFRTRYGHYEFVVMSFGLTNAPAVFMELMNRVFKECL 674

Query: 714  DLFVIVFIDDILIYSKTDLEHQEHLRKALTILRENRLYAKFTKCEFWLRQVSFLGHVVSK 773
            D FVIVFIDDILIYSKTDLEHQEHLRKALTILREN+LYAKFT+CEFWLRQVSFLGHVVSK
Sbjct: 675  DSFVIVFIDDILIYSKTDLEHQEHLRKALTILRENKLYAKFTECEFWLRQVSFLGHVVSK 734

Query: 774  DGIFVDPNKIEAVTKWKRPTTVTEIRSFLGLAGYYRRFVQDFARIATPLTQLTKKGVPFV 833
             GIFVDPNKIEAVTKWKRPTTVTEIRSFLGLAGYYRRFVQDFARIATPLTQLTKKGVPFV
Sbjct: 735  YGIFVDPNKIEAVTKWKRPTTVTEIRSFLGLAGYYRRFVQDFARIATPLTQLTKKGVPFV 794

Query: 834  WDDTCEASFQELKQRLVSTPVLTVPEGSVGYAIYSDASKKGLGCVLMQHGKVVAYASHQL 893
            WDDTCEASFQELKQRLVS PVLTVPE SVGY IYSDASKKGLGCVLMQHGKVVAYAS QL
Sbjct: 795  WDDTCEASFQELKQRLVSAPVLTVPESSVGYVIYSDASKKGLGCVLMQHGKVVAYASRQL 854

Query: 894  KDYKKNYPTHDLELAAVVFTLKIWRHYLYGEKTQIYTDHKSLKYLFTQKELNMRQRRWLE 953
             DY+KNYPTHDLELAAVVF LKIWRHYLYGE +QIYTDHKSLKYLFTQKELNMRQR+WLE
Sbjct: 855  XDYEKNYPTHDLELAAVVFALKIWRHYLYGENSQIYTDHKSLKYLFTQKELNMRQRKWLE 914

Query: 954  LVKDYDIDIQYHPGKANVVADALSRKVVHSSAFITREPRVRTDFEQADIAVVTKEVAAQI 1013
            LVKDYDIDIQYHPGKANVVADALSRKVVHSSA ITREPRVRTDFEQADIA          
Sbjct: 915  LVKDYDIDIQYHPGKANVVADALSRKVVHSSALITREPRVRTDFEQADIA---------- 974

Query: 1014 ARLTVRPTLRQRIIDSQREDPSLSKILDQLAVGPVDGFTKSTDDGLLCQGRLCVPPMSGI 1073
                                                                        
Sbjct: 975  ------------------------------------------------------------ 991

Query: 1074 KNEILTEAHNSTFSIHPGGTKMYQDLKKHFWWRSMKKDIAE 1115
                          I+P GTKMYQDLK+HFWWRSMKKDIAE
Sbjct: 1035 --------------IYPSGTKMYQDLKQHFWWRSMKKDIAE 991

[Close]

BLAST of CmoCh10G011040 vs. NCBI nr
Match: XP_022951914.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111454654 [Cucurbita moschata])

HSP 1 Score: 45.8 bits (107), Expect = 3.0e+00
Identity = 26/28 (92.86%), Postives = 26/28 (92.86%), Query Frame = 0


Query: 1   MQTMLDTQQATLLATQQVAAMATQPANA 29
           MQTMLDTQQATLLATQQV  MATQPANA
Sbjct: 87  MQTMLDTQQATLLATQQVTGMATQPANA 114

HSP 2 Score: 1286.6 bits (3328), Expect = 0.0e+00
Identity = 655/1090 (60.09%), Postives = 802/1090 (73.58%), Query Frame = 0


Query: 33   PANAVATQPANAVAPQPVDAVAIQPVNNPHPNRGANWLKDFRRYNPRPFVGSKEDPTAAQ 92
            PA A A  P  A AP PV  VA Q V +   +  A  L+DFR+YNP  F GS EDPT AQ
Sbjct: 298  PAPAPAPAPVPAPAPAPV-PVAPQFVPD-QLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ 357

Query: 93   MWIANMETTFESMRCPDEHKVACATYVLQKDAEVWWSDNKQSINPGGGITTWETFKEAFL 152
            MW++++ET F  M+CP++ KV CA ++L      WW   ++ +       TW+ FKE+F 
Sbjct: 358  MWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFY 417

Query: 153  KYYYPKETRIKKQQEFNHLTQGDRTVDQYDQDFMRLRRFAPSLADTEEKQTEKFVLGLNP 212
              ++    R  K+QEF +L QGD TV+QYD +F  L RFAP +  TE  + +KFV GL  
Sbjct: 418  AKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRL 477

Query: 213  KTRRMLEAFNPKTYEEALRTA--KALEEPPEEKKTEPTVAT-GRKR-----PVEVDTTEF 272
              + ++ AF P T+ +ALR A   +L+E     KT    +T G+KR     PV V    F
Sbjct: 478  DIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNF 537

Query: 273  QPPSQRPRYQNRPPAPPPIGRYLAMEKPLCRNCGKQHVGRCLAGSGMCYICGHAGHVART 332
            +P  +   +Q +P       R     KPLC  CGK H+GRCL G+  C+ C   GH A  
Sbjct: 538  RPGGEFRSFQQKPFEAGEAAR----GKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADR 597

Query: 333  CPTKSPGFPREPLRGPVIREPTLQTRPQTKAYVTTGKEAGTSGTVVTGTLAILGHFALTL 392
            CP +  G  +    G            Q + + T   EA  +GTVVTGTL +LGH+AL L
Sbjct: 598  CPLRLTGIAQNQGAG---------APHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVL 657

Query: 393  FDSGSTHSFVALPFVKQAGFVIEPLMHALSVGTPAGVDLVTKDRVRDGQVVIAGQTIHVD 452
            FDSGS+HSF++  FV  A   +EPL H LSV TP+G  +++K++V+  Q+ IAG  I V 
Sbjct: 658  FDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVT 717

Query: 453  LKVVDMTDFDVILGMDWLAENFATIDCHKKEVIFTPPNGLTFKFKGTSTGTTPKIISMMK 512
            L V+DM DFDVILGMDWLA N A+IDC +KEV F PP+  +FKFKG  + + P++IS ++
Sbjct: 718  LIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIR 777

Query: 513  ARRLIQQGGWAFLAYAVNTKGKEKPIDTIPVVNEFMDVFPEDLPGIPPSREVDFGIDLEP 572
            A +L+ QG W  LA  V+T+  +  + + PVV ++ DVFPE+LPG+PP REV+F I+LEP
Sbjct: 778  ASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEP 837

Query: 573  GTGPISKAPYRMAPAELKELKIQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDY 632
            GT PIS+APYRMAPAELKELK+QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDY
Sbjct: 838  GTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDY 897

Query: 633  RELNKRTVKNKYPLPRIEDLFDQLRGATVFSKIDLRSGYHQIKIKNEDIPKTAFRTRYGH 692
            RELNK TVKN+YPLPRI+DLFDQL+GATVFSKIDLRSGYHQ++IK+ED+PKTAFR+RYGH
Sbjct: 898  RELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGH 957

Query: 693  YEFVVMSFGLTNAPAVFMELMNRVFKECLDLFVIVFIDDILIYSKTDLEHQEHLRKALTI 752
            YEF+VMSFGLTNAPAVFM+LMNRVF+E LD FVIVFIDDILIYSKT+ EH+EHLR  L  
Sbjct: 958  YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQT 1017

Query: 753  LRENRLYAKFTKCEFWLRQVSFLGHVVSKDGIFVDPNKIEAVTKWKRPTTVTEIRSFLGL 812
            LR+N+LYAKF+KCEFWL+QVSFLGHVVSK G+ VDP KIEAVT W RP+TV+E+RSFLGL
Sbjct: 1018 LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL 1077

Query: 813  AGYYRRFVQDFARIATPLTQLTKKGVPFVWDDTCEASFQELKQRLVSTPVLTVPEGSVGY 872
            AGYYRRFV++F+RIATPLTQLT+KG PFVW   CE SFQ LKQ+LV+ PVLTVP+GS  +
Sbjct: 1078 AGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSF 1137

Query: 873  AIYSDASKKGLGCVLMQHGKVVAYASHQLKDYKKNYPTHDLELAAVVFTLKIWRHYLYGE 932
             IYSDASKKGLGCVLMQ GKVVAYAS QLK +++NYPTHDLELAAVVF LKIWRHYLYGE
Sbjct: 1138 VIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE 1197

Query: 933  KTQIYTDHKSLKYLFTQKELNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKVVHSS 992
            K QI+TDHKSLKY FTQKELNMRQRRWLELVKDYD +I YHPGKANVVADALSRKV HS+
Sbjct: 1198 KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSA 1257

Query: 993  AFITREPRVRTDFEQADIAVVTKEVAAQIARLTVRPTLRQRIIDSQREDPSLSKILDQLA 1052
            A ITR+  +  D E+A+IAV    V  Q+A+LTV+PTLRQRIID+Q  DP L +      
Sbjct: 1258 ALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAE 1317

Query: 1053 VGPVDGFTKSTDDGLLCQGRLCVPPMSGIKNEILTEAHNSTFSIHPGGTKMYQDLKKHFW 1112
             G    F+ S+D GLL + RLCVP  S +K E+L+EAH+S FS+HPG TKMYQDLK+ +W
Sbjct: 1318 AGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 1372

Query: 1113 WRSMKKDIAE 1115
            WR+MK+++AE
Sbjct: 1378 WRNMKREVAE 1372

[Close]

BLAST of CmoCh10G011040 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 1281.2 bits (3314), Expect = 0.0e+00
Identity = 653/1087 (60.07%), Postives = 799/1087 (73.51%), Query Frame = 0


Query: 41   PANAVAPQPVDAVAIQPVNNPH--PNR---GANWLKDFRRYNPRPFVGSKEDPTAAQMWI 100
            PA A AP P  A A  PV  PH  P++    A  L+DFR+YNP  F GS EDPT AQMW+
Sbjct: 80   PAPAPAPAPAPAPAPVPV-APHFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWL 139

Query: 101  ANMETTFESMRCPDEHKVACATYVLQKDAEVWWSDNKQSINPGGGITTWETFKEAFLKYY 160
            +++ET F  M+CP++ KV CA ++L      WW   ++ +       TW+ FKE+F   +
Sbjct: 140  SSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKF 199

Query: 161  YPKETRIKKQQEFNHLTQGDRTVDQYDQDFMRLRRFAPSLADTEEKQTEKFVLGLNPKTR 220
            +    R  K+QEF +L QGD TV+QYD +F  L RFAP +  TE  + +KFV GL    +
Sbjct: 200  FSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVTGLRLDIQ 259

Query: 221  RMLEAFNPKTYEEALRTA--KALEEPPEEKKTEPTVAT-GRKR-----PVEVDTTEFQPP 280
             ++ AF P T+ +ALR A   +L+E     KT    +T G+KR     PV V    F+  
Sbjct: 260  GLVRAFRPATHADALRLAVDLSLQEKANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRSG 319

Query: 281  SQRPRYQNRPPAPPPIGRYLAMEKPLCRNCGKQHVGRCLAGSGMCYICGHAGHVARTCPT 340
             +  R+Q +P       R     KPLC  CGK H+G CL G+  C+ C    H A  CP 
Sbjct: 320  GEFRRFQQKPFEAGEAAR----GKPLCTTCGKHHLGHCLFGTRTCFKCRQEVHTADRCPL 379

Query: 341  KSPGFPREPLRGPVIREPTLQTRPQTKAYVTTGKEAGTSGTVVTGTLAILGHFALTLFDS 400
            +  G  +    G            Q + + T   EA  +GTVVTGTL ++GH+AL LFDS
Sbjct: 380  RLTGNAQNQGAG---------APHQGRVFATNKTEAEKAGTVVTGTLPVMGHYALVLFDS 439

Query: 401  GSTHSFVALPFVKQAGFVIEPLMHALSVGTPAGVDLVTKDRVRDGQVVIAGQTIHVDLKV 460
            GS+HSF++  FV  A   +EPL H LSV TP+G  +++K++V+  Q+ IAG  I V L V
Sbjct: 440  GSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIV 499

Query: 461  VDMTDFDVILGMDWLAENFATIDCHKKEVIFTPPNGLTFKFKGTSTGTTPKIISMMKARR 520
            +DM DFDVILGMDWLA N A+IDC +KEV F PP+  +FKFKG  + + P++IS ++A +
Sbjct: 500  LDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASK 559

Query: 521  LIQQGGWAFLAYAVNTKGKEKPIDTIPVVNEFMDVFPEDLPGIPPSREVDFGIDLEPGTG 580
            L+ QG W  LA  V+T+  +  +   PVV ++ DVFPE+LPG+PP REV+F I+LEPGT 
Sbjct: 560  LLSQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTV 619

Query: 581  PISKAPYRMAPAELKELKIQLQDLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYREL 640
            PIS+APYRMAPAELKELK+QLQ+LLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYREL
Sbjct: 620  PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYREL 679

Query: 641  NKRTVKNKYPLPRIEDLFDQLRGATVFSKIDLRSGYHQIKIKNEDIPKTAFRTRYGHYEF 700
            NK TVKN+YPLPRI+DLFDQL+GATVFSKIDLRSGYHQ++IK+ED+PKTAFR+RYGHYEF
Sbjct: 680  NKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEF 739

Query: 701  VVMSFGLTNAPAVFMELMNRVFKECLDLFVIVFIDDILIYSKTDLEHQEHLRKALTILRE 760
            +VMSFGLTNAPAVFM+LMNRVF+E LD FVIVFIDDILIYSKT++EH+EHLR  L  LR+
Sbjct: 740  IVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRD 799

Query: 761  NRLYAKFTKCEFWLRQVSFLGHVVSKDGIFVDPNKIEAVTKWKRPTTVTEIRSFLGLAGY 820
            N+LYAKF KCEFWL+QVSFLGHVVSK G+ VDP KIEAVT W RP+TV+E+RSFLGLAGY
Sbjct: 800  NKLYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGY 859

Query: 821  YRRFVQDFARIATPLTQLTKKGVPFVWDDTCEASFQELKQRLVSTPVLTVPEGSVGYAIY 880
            YRRFV++F+RIATPLTQLT+KG PFVW   CE SFQ LKQ+LV+ PVLTVP+GS  + IY
Sbjct: 860  YRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIY 919

Query: 881  SDASKKGLGCVLMQHGKVVAYASHQLKDYKKNYPTHDLELAAVVFTLKIWRHYLYGEKTQ 940
            SDASKKGLGCVLMQ GKVVAYAS QLK +++NYPTHDLELAAVVF LKIWRHYLYGEK Q
Sbjct: 920  SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ 979

Query: 941  IYTDHKSLKYLFTQKELNMRQRRWLELVKDYDIDIQYHPGKANVVADALSRKVVHSSAFI 1000
            I+TDHKSLKY FTQKELNMRQRRWLELVKDYD +I YHPGKANVVADALSRKV HS+A I
Sbjct: 980  IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALI 1039

Query: 1001 TREPRVRTDFEQADIAVVTKEVAAQIARLTVRPTLRQRIIDSQREDPSLSKILDQLAVGP 1060
            TR+  +  D E+A+IAV    V  Q+A+LTV+PTLRQRIID+Q  DP L +      VG 
Sbjct: 1040 TRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEVGQ 1099

Query: 1061 VDGFTKSTDDGLLCQGRLCVPPMSGIKNEILTEAHNSTFSIHPGGTKMYQDLKKHFWWRS 1115
               F+ S+D GLL + RLCVP  S IK E+L+EAH+S FS+HPG TKMYQDLK+ +WWR+
Sbjct: 1100 AVEFSLSSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRN 1152

[Close]

BLAST of CmoCh10G011040 vs. NCBI nr
Match: KAA0025848.1 (pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo var. makuwa] >KAA0036593.1 pol protein [Cucumis melo var. makuwa] >KAA0036739.1 pol protein [Cucumis melo var. makuwa] >KAA0037408.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1278.5 bits (3307), Expect = 0.0e+00
Identity = 660/1118 (59.03%), Postives = 802/1118 (71.74%), Query Frame = 0


Query: 2    QTMLDTQQATLLATQQVAAMATQPANAVATQPANAVATQPANAVAPQPVDAVAIQPVNNP 61
            Q ML    A  LA QQ  A   Q   A A   A  V  Q     AP+    V +Q     
Sbjct: 51   QDMLQAALAPFLAAQQNQAAPVQAEAAPAQAQAAPVQAQAVAPPAPEEAQPVPVQ----- 110

Query: 62   HPNRGANWLKDFRRYNPRPFVGSKEDPTAAQMWIANMETTFESMRCPDEHKVACATYVLQ 121
              +  A  L+DFR+YNP+ F GS ++PT AQMW+ ++ET F  M+CP++ KV CA + L+
Sbjct: 111  -LSTEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLE 170

Query: 122  KDAEVWWSDNKQSINPGGGITTWETFKEAFLKYYYPKETRIKKQQEFNHLTQGDRTVDQY 181
                 WW   ++ +       TWE FKE F   ++    +  K QEF +L QGD TV+QY
Sbjct: 171  DRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQY 230

Query: 182  DQDFMRLRRFAPSLADTEEKQTEKFVLGLNPKTRRMLEAFNPKTYEEALRTAKALEEPPE 241
            D +F  L RFAP +   E  +TEKFV GL    + ++ A  P T+ +ALR A  L  P  
Sbjct: 231  DAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPER 290

Query: 242  ---EKKTEPTVATGRKRPVEVDTTEFQPPSQRPR--YQNRPPAPPPIGRYLAMEKPLCRN 301
                K      A G+KR VE         + R    +Q         GR L  E P C  
Sbjct: 291  ADASKAAGRGSALGQKRKVETQPDVVPQRTLRSGGVFQRHRRELAAAGRTL-RELPACTT 350

Query: 302  CGKQHVGRCLAGSGMCYICGHAGHVARTCPTKSPGFPREPLRGPVIREPTLQTRPQTKAY 361
            CG+ H GRCLAGSG+C+ C   GH A  CP K   F   P        P      Q + +
Sbjct: 351  CGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKP--FETTP--------PQPSAAQQGRVF 410

Query: 362  VTTGKEAGTSGTVVTGTLAILGHFALTLFDSGSTHSFVALPFVKQAGFVIEPLMHALSVG 421
             TT +EA  +GTVVTGTL ILGH+A  LFDSGS+HSF++  FV+  G  +EPL   LSV 
Sbjct: 411  ATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVS 470

Query: 422  TPAGVDLVTKDRVRDGQVVIAGQTIHVDLKVVDMTDFDVILGMDWLAENFATIDCHKKEV 481
            TP+G  L++K++++  +V IA + + V L V+DM DFDVILGMDWL+ N A IDC+ KEV
Sbjct: 471  TPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEV 530

Query: 482  IFTPPNGLTFKFKGTSTGTTPKIISMMKARRLIQQGGWAFLAYAVNTKGKEKPIDTIPVV 541
            +F PP+  +FKF+G      PK+IS MKA +L+ QG W  LA  V+ +  E  + + PVV
Sbjct: 531  VFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVV 590

Query: 542  NEFMDVFPEDLPGIPPSREVDFGIDLEPGTGPISKAPYRMAPAELKELKIQLQDLLDKGF 601
             E+ DVFP++LPG+PP REVDF I+LEPGT PIS+APYRMAPAELKELK+QLQ+LLDKGF
Sbjct: 591  REYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGF 650

Query: 602  IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKRTVKNKYPLPRIEDLFDQLRGATVFSK 661
            IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK TVKN+YPLPRI+DLFDQL+GATVFSK
Sbjct: 651  IRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSK 710

Query: 662  IDLRSGYHQIKIKNEDIPKTAFRTRYGHYEFVVMSFGLTNAPAVFMELMNRVFKECLDLF 721
            IDLRSGYHQ++I++ DIPKTAFR+RYGHYEFVVMSFGLTNAPAVFM+LMNRVFKE LD F
Sbjct: 711  IDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSF 770

Query: 722  VIVFIDDILIYSKTDLEHQEHLRKALTILRENRLYAKFTKCEFWLRQVSFLGHVVSKDGI 781
            VIVFIDDILIYSKT+ EH+EHL + L  LR N+LYAKF+KCEFWLR+V+FLGHVVS +G+
Sbjct: 771  VIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGV 830

Query: 782  FVDPNKIEAVTKWKRPTTVTEIRSFLGLAGYYRRFVQDFARIATPLTQLTKKGVPFVWDD 841
             VDP KIEAVT W RP+TV+EIRSFLGLAGYYRRFV+DF+RIA+PLTQLT+KG PFVW  
Sbjct: 831  SVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP 890

Query: 842  TCEASFQELKQRLVSTPVLTVPEGSVGYAIYSDASKKGLGCVLMQHGKVVAYASHQLKDY 901
             CE SFQELKQ+LV+ PVLTVP+GS  + IYSDASKKGLGCVLMQ GKVVAYAS QLK +
Sbjct: 891  ACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIH 950

Query: 902  KKNYPTHDLELAAVVFTLKIWRHYLYGEKTQIYTDHKSLKYLFTQKELNMRQRRWLELVK 961
            ++NYPTHDLELAAVVF LKIWRHYLYGEK QIYTDHKSLKY FTQKELNMRQRRWLELVK
Sbjct: 951  EQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVK 1010

Query: 962  DYDIDIQYHPGKANVVADALSRKVVHSSAFITREPRVRTDFEQADIAVVTKEVAAQIARL 1021
            DYD +I YHPGKANVVADALSRKV HS+A IT++  +  DFE+A+IAV   EV AQ+A+L
Sbjct: 1011 DYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQL 1070

Query: 1022 TVRPTLRQRIIDSQREDPSLSKILDQLAVGPVDGFTKSTDDGLLCQGRLCVPPMSGIKNE 1081
            TV+PTLRQ+II +Q +DP L++    +     +GF+ S+DDGL+ +GRLCVP  S +K E
Sbjct: 1071 TVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTE 1130

Query: 1082 ILTEAHNSTFSIHPGGTKMYQDLKKHFWWRSMKKDIAE 1115
            +LTEAH+S F++HPG TKMYQDL+  +WWR MK+D+A+
Sbjct: 1131 LLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAD 1151

[Close]

BLAST of CmoCh10G011040 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 7.1e-24
Identity = 51/125 (40.80%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 737 HLRKALTILRENRLYAKFTKCEFWLRQVSFLG--HVVSKDGIFVDPNKIEAVTKWKRPTT 796
           HL   L I  +++ YA   KC F   Q+++LG  H++S +G+  DP K+EA+  W  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 797 VTEIRSFLGLAGYYRRFVQDFARIATPLTQLTKKGVPFVWDDTCEASFQELKQRLVSTPV 856
            TE+R FLGL GYYRRFV+++ +I  PLT+L KK     W +    +F+ LK  + + PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTLPV 122

Query: 857 LTVPE 860
           L +P+
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:

BLAST of CmoCh10G011040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	2.7e-89	33.22	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.2e-84	38.57	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P0CT41	3.5e-84	31.83	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.5e-84	31.83	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.5e-84	31.83	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CmoCh10G011040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYH9	0.0e+00	94.15	Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111440131 PE=4 SV=1	[more]
A0A6J1GK52	0.0e+00	85.55	Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111454654 PE=4 SV=1	[more]
A0A6J1GK52	1.5e+00	92.86	Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111454654 PE=4 SV=1	[more]
A0A5A7T190	0.0e+00	60.07	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]
A0A5D3CQB5	0.0e+00	59.03	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

Pages

BLAST of CmoCh10G011040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933231.1	0.0e+00	94.15	LOW QUALITY PROTEIN: uncharacterized protein LOC111440131 [Cucurbita moschata]	[more]
XP_022951914.1	0.0e+00	85.55	LOW QUALITY PROTEIN: uncharacterized protein LOC111454654 [Cucurbita moschata]	[more]
XP_022951914.1	3.0e+00	92.86	LOW QUALITY PROTEIN: uncharacterized protein LOC111454654 [Cucurbita moschata]	[more]
KAA0037244.1	0.0e+00	60.07	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0025848.1	0.0e+00	59.03	pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo v...	[more]

Pages

BLAST of CmoCh10G011040 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	7.1e-24	40.80	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 636..771 e-value: 5.5E-92 score: 308.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 781..867 e-value: 1.0E-31 score: 110.7
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 350..486 e-value: 4.5E-19 score: 70.5
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 368..470
None	No IPR available	GENE3D	4.10.60.10		coord: 258..331 e-value: 3.5E-5 score: 25.5
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 557..696 e-value: 5.5E-92 score: 308.8
None	No IPR available	PFAM	PF08284	RVP_2	coord: 353..481 e-value: 2.1E-30 score: 105.3
None	No IPR available	GENE3D	3.10.20.370		coord: 868..929 e-value: 3.4E-5 score: 25.7
None	No IPR available	GENE3D	1.10.340.70		coord: 1050..1120 e-value: 1.4E-12 score: 49.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..260
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 77..215
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 292..987
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 292..987
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 77..215
None	No IPR available	CDD	cd01647	RT_LTR	coord: 595..771 e-value: 2.93824E-93 score: 294.503
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 866..980 e-value: 9.3522E-57 score: 190.011
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 378..463 e-value: 1.88971E-16 score: 73.91
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 865..958 e-value: 1.5E-30 score: 105.6
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 611..770 e-value: 1.8E-28 score: 99.6
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 592..771 score: 10.577034
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 1074..1117 e-value: 8.4E-10 score: 38.6
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 116..212 e-value: 1.2E-14 score: 54.4
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 312..326 score: 10.081271
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 535..964
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 308..332

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G011040.1	CmoCh10G011040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0019538	protein metabolic process
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0140657	ATP-dependent activity
molecular_function	GO:0016757	glycosyltransferase activity
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0008270	zinc ion binding