CmoCh10G010370 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G010370
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	non-specific lipid transfer protein GPI-anchored 2-like
Location	Cmo_Chr10: 5463028 .. 5464990 (+)
RNA-Seq Expression	CmoCh10G010370
Synteny	CmoCh10G010370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAAAAAGAAATAAATAAGCAATCAAAGTCCTGCAATGGCGGTAGCTGCTGCCATTAATTCACACTCGCCTTCCTCTTCCCAAACCACTTCCCTTCTTCTCTCTCTCTCTCTCTCTATATCTCTCTCCTCCTCCTCCTCTTCTCTTCAATTCCACCGCCAACCAACTCAAACCCTAGAAAACGAAACAACCGTCTCGATCTACACCAATGGCGACGCCCTCGATCTTCGCGCTAGCGGCGGTGATAATCGCGATTCACGGCATTGCAGGGGCGGTGGCGCAGGCTCCGGCGCCGGGGCCAGCGGTTGCGACGGACTGCTTCACGACGCTGCTGAATATGTCGGATTGCCTGTCGTACGTGTCGGCGGGGAGCAAGGACGTGAAGCCGGACAAGCATTGCTGCCCGGAGCTGGCGGGGCTGGTGGAGAGTAGCCCTAGCTGCCTCTGTCAGCTGCTTAGCGATCCTAATAAAGTTGGGTTAACCATTGATGTCGACAGAGCTATGAAGCTTCCTTCCGCCTGCAATGTCTCCACTCCTCCCGTCAATCTCTGTTCTCGTAAGCTTTCTTTTCCCTTTCCTTAAATAAAAAAAAAATTAAAAAAATTAAAAAAAAATAATTAAAATGTTTAATCTTTTTAAAATACCCAATTTAATCTTTTTTTTTTTCTTCTTTTTAATGGAAATTTTCAATTATGATTCAAATTTATATTCCATGATTTTTCAATTTTTCAATCTGCCCCTAAGTTTTTGGAGTGGAGATTTGTAGCTATTAAGTCCCTCAAACTTTAAAAATTACAACTTAATTGTAACGACCCAGATCCACCACGGTTAGATATTATCCTCTTTGGACCTTCTCGGCTTTAAAATGCATCTGCTAAGGGAAGGTTTTCACACTCTTATAACGGGTGGTTTGTTCTCCTCCCAATCAATGTGGGACACATCTGCTAAGAGAAGGTTTTTATACTCTTATAAAGGGTGGTTTGTACTCCTCCCAATCAATGTGGACTTTCCCTTTTGGGCTTCACCTCGAGACTTTAAAACGCATTTGTGATCCCTTTTGGGCTTCACCTCGAGACTTTAAAACGCATTTGTGAGGAGAAAGTTTACACACCCTTATAAAGTTTAAGGACTAAATTGTTATTTTACGAAAATCGAAGCATTTTTTAATACTAAGTTCAAGTTTAATTGAAAGTTTAAAAACATTGTTATTTTATGAAAATCGAAGCATTTTTTAATATTAAGATCATGGAAATTGGAAGTTCAAAAACATTCTTAAAACAATCAAACAAACATAAACTAATTTATTACCAAATGACTTTTATGTTTCAAATTTGCAACAAACATGAACTAAGAACATGCTAGTTTCCCTCCATGAACAAAATTCAAATAAATTTTGAGGCTTAGATCAGTCTTAAAAGCATCATAAGAGGGAGGTTTGTAGCTCAAACCTGCTTGTTTTGAATGCAGTTTTGGGATTTCCGGTGGGATCAAATAGTCCCGGATCAGCCCCAGCACCAGCACCAGGACCAGGTACTAAATCTTCCATACTCTACATTCTAAGTTCATGGTTTGAGTTTATTCTGAACGAAAATTTCGAATGTTAAAACGCACCTAGGTGTTCAACCACTGGACGATGGAGGCTCCGCCACCCCCGGTACCCCGGGAAGCAGCGGGAATAGGGCTTCGAGCATCAACCGCCTTCATCTCGCATTTCTGCTTGGCATAGCCTTGGGATTTCTTTCGACGCTTCTCTAACCGAGATATCTTTGATTGTCTGTTATTGTTTGCCAATTCTTCTGTCTTTCCTTTTCAGTTCATATGTAGTATTGTACTGAGATATTTTCATGATTGTTAGGCAATAAAAGTTTCTATTGAAATATTTTGTTGAAACTACCTGTTCTTGTAGCTTGTAAAAAGTGAATGTTTCTGTGATGGTAAAGATTGGAAAAACAAGTTTTAGA

mRNA sequence

AACAAAAAAGAAATAAATAAGCAATCAAAGTCCTGCAATGGCGGTAGCTGCTGCCATTAATTCACACTCGCCTTCCTCTTCCCAAACCACTTCCCTTCTTCTCTCTCTCTCTCTCTCTATATCTCTCTCCTCCTCCTCCTCTTCTCTTCAATTCCACCGCCAACCAACTCAAACCCTAGAAAACGAAACAACCGTCTCGATCTACACCAATGGCGACGCCCTCGATCTTCGCGCTAGCGGCGGTGATAATCGCGATTCACGGCATTGCAGGGGCGGTGGCGCAGGCTCCGGCGCCGGGGCCAGCGGTTGCGACGGACTGCTTCACGACGCTGCTGAATATGTCGGATTGCCTGTCGTACGTGTCGGCGGGGAGCAAGGACGTGAAGCCGGACAAGCATTGCTGCCCGGAGCTGGCGGGGCTGGTGGAGAGTAGCCCTAGCTGCCTCTGTCAGCTGCTTAGCGATCCTAATAAAGTTGGGTTAACCATTGATGTCGACAGAGCTATGAAGCTTCCTTCCGCCTGCAATGTCTCCACTCCTCCCGTCAATCTCTGTTCTCTTTTGGGATTTCCGGTGGGATCAAATAGTCCCGGATCAGCCCCAGCACCAGCACCAGGACCAGGTGTTCAACCACTGGACGATGGAGGCTCCGCCACCCCCGGTACCCCGGGAAGCAGCGGGAATAGGGCTTCGAGCATCAACCGCCTTCATCTCGCATTTCTGCTTGGCATAGCCTTGGGATTTCTTTCGACGCTTCTCTAACCGAGATATCTTTGATTGTCTGTTATTGTTTGCCAATTCTTCTGTCTTTCCTTTTCAGTTCATATGTAGTATTGTACTGAGATATTTTCATGATTGTTAGGCAATAAAAGTTTCTATTGAAATATTTTGTTGAAACTACCTGTTCTTGTAGCTTGTAAAAAGTGAATGTTTCTGTGATGGTAAAGATTGGAAAAACAAGTTTTAGA

Coding sequence (CDS)

ATGGCGACGCCCTCGATCTTCGCGCTAGCGGCGGTGATAATCGCGATTCACGGCATTGCAGGGGCGGTGGCGCAGGCTCCGGCGCCGGGGCCAGCGGTTGCGACGGACTGCTTCACGACGCTGCTGAATATGTCGGATTGCCTGTCGTACGTGTCGGCGGGGAGCAAGGACGTGAAGCCGGACAAGCATTGCTGCCCGGAGCTGGCGGGGCTGGTGGAGAGTAGCCCTAGCTGCCTCTGTCAGCTGCTTAGCGATCCTAATAAAGTTGGGTTAACCATTGATGTCGACAGAGCTATGAAGCTTCCTTCCGCCTGCAATGTCTCCACTCCTCCCGTCAATCTCTGTTCTCTTTTGGGATTTCCGGTGGGATCAAATAGTCCCGGATCAGCCCCAGCACCAGCACCAGGACCAGGTGTTCAACCACTGGACGATGGAGGCTCCGCCACCCCCGGTACCCCGGGAAGCAGCGGGAATAGGGCTTCGAGCATCAACCGCCTTCATCTCGCATTTCTGCTTGGCATAGCCTTGGGATTTCTTTCGACGCTTCTCTAA

Protein sequence

MATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLSTLL

Homology

[Close]

BLAST of CmoCh10G010370 vs. ExPASy Swiss-Prot
Match: Q9LZH5 (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana OX=3702 GN=LTPG2 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.2e-24
Identity = 71/171 (41.52%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 1   MATPSIFALAAVIIAIHG-IAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKD-- 60
           M+   + A+  ++ ++ G ++  +  +P+ GP+ A DC   L+NM+ CLSYV+ G     
Sbjct: 1   MSNVVVIAVVLIVASLTGHVSAQMDMSPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGA 60

Query: 61  VKPDKHCCPELAGLVESSPSCLCQLLSD--PNKVGLTIDVDRAMKLPSACNVSTPPVNLC 120
            KPDK CCP LAGLVESSP CLC LLS     ++G+ ID  +A+KLP  C V TP  +LC
Sbjct: 61  AKPDKTCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLC 120

Query: 121 SLLGFPVGS----NSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASS 163
           SL G PVG+       G++PA APG  +   +  G    G   S G+ A S
Sbjct: 121 SLFGIPVGAPVAMGDEGASPAYAPG-SMSGAESPGGFGSGPSASRGSDAPS 170

[Close]

BLAST of CmoCh10G010370 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.0e-19
Identity = 58/150 (38.67%), Postives = 85/150 (56.67%), Query Frame = 0


Query: 34  ATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCCPELAGLVESSPSCLCQLLSDPNKVGLTI 93
           A DC + +LNM+DCLS+V++GS  VKP+  CC  L  +V + P CLC+   +   +GLT+
Sbjct: 24  AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTL 83

Query: 94  DVDRAMKLPSACNVSTPPVNLCSLLGFPVGSNSPGSAP--APAPGPGVQPLDDGGSATPG 153
           D+ +A  LPS C V+ PP   C   G  V  + P +AP  +P  G G   L  G +A   
Sbjct: 84  DLSKAASLPSVCKVAAPPSARC---GLSVSGDPPATAPGLSPTAGAGAPALSSGANA--A 143

Query: 154 TPGSSGNRASSINRLHLAFLLGIALGFLST 182
           TP SS  R+S  + L ++F   I +  +S+
Sbjct: 144 TPVSS-PRSSDASLLSVSFAFVIFMALISS 167

[Close]

BLAST of CmoCh10G010370 vs. ExPASy Swiss-Prot
Match: Q9ZVC7 (Non-specific lipid transfer protein GPI-anchored 12 OS=Arabidopsis thaliana OX=3702 GN=LTPG12 PE=2 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-18
Identity = 62/170 (36.47%), Postives = 88/170 (51.76%), Query Frame = 0


Query: 20  AGAVAQAPAP----GPAVATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCCPELAGLVESS 79
           +G    AP P    GP+   +C  ++LN+SDC SYV  GS ++KP+  CCPELAG+V+SS
Sbjct: 19  SGQSPPAPEPIAADGPSSPVNCLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSS 78

Query: 80  PSCLCQLLSD--PNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSNSPGSAPAP 139
           P C+C L       + G+ +D  RA +L + C V  P  +LCS+LGFP  S      PA 
Sbjct: 79  PECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFPTIS------PAG 138

Query: 140 APGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLSTLL 184
           +        +D  S + G+     N A +          G+AL  L+ LL
Sbjct: 139 S--------EDSSSGSEGSDKDKKNGAMTTK------YCGVALNSLALLL 168

[Close]

BLAST of CmoCh10G010370 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.2e-16
Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 2   ATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKPD 61
           AT  +F +  + ++   + GA +   A  PA + DC T +LNM+DCLS+VS+G    KP+
Sbjct: 9   ATTPLFLIVLLSLSSVSVLGA-SHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPE 68

Query: 62  KHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFP 121
             CC  L  ++++   CLC+       +G+T+++ +A  LP+AC +  P +  C L    
Sbjct: 69  GTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGL---- 128

Query: 122 VGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSI 164
             S +P +AP  APG      +  G   P    SSGN  SS+
Sbjct: 129 --SVAPSTAPGLAPGVAAAGPETAGFLAPNP--SSGNDGSSL 161

[Close]

BLAST of CmoCh10G010370 vs. ExPASy Swiss-Prot
Match: Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-15
Identity = 52/171 (30.41%), Postives = 90/171 (52.63%), Query Frame = 0


Query: 26  APAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCCPELAGLVESSPSCLCQLLSD 85
           APAPGP+ ++DC T + +M DCL Y+  GS + KP+K CC  +  +++ +P C+C  L  
Sbjct: 38  APAPGPS-SSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVS 97

Query: 86  PNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSNSPGSAP------APAPGPGV 145
             ++G+ ++  RA+  P AC +S  P + C ++    G+ +PG++P      AP   P  
Sbjct: 98  AGEMGIELNSTRALATPKACKLSIAPPH-CGII--TSGATTPGASPVSPSAGAPTTSPSA 157

Query: 146 ----------QPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLS 181
                        D+  S T  +P SSG    S+  L + F++  ++ ++S
Sbjct: 158 AKSPETSATSPSSDETPSMTAPSPSSSGTNILSVPALTIVFVIVSSVAYIS 204

[Close]

BLAST of CmoCh10G010370 vs. ExPASy TrEMBL
Match: A0A6J1H7Z8 (non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita moschata OX=3662 GN=LOC111461313 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 3.8e-94
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60
           MATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP
Sbjct: 1   MATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60

Query: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120
           DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF
Sbjct: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120

Query: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLS 180
           PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLS
Sbjct: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLS 180

Query: 181 TLL 184
           TLL
Sbjct: 181 TLL 183

[Close]

BLAST of CmoCh10G010370 vs. ExPASy TrEMBL
Match: A0A6J1JCG9 (non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485521 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.3e-90
Identity = 177/183 (96.72%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKP 60
           MATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKD KP
Sbjct: 1   MATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDAKP 60

Query: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120
           DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF
Sbjct: 61  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 120

Query: 121 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLS 180
           PVGSNSP SAPAPAPGPGVQP D+GGSA PGTPGSSGNRASSINRLHLAF LGIALGFLS
Sbjct: 121 PVGSNSPASAPAPAPGPGVQPQDNGGSAIPGTPGSSGNRASSINRLHLAFPLGIALGFLS 180

Query: 181 TLL 184
           TLL
Sbjct: 181 TLL 183

[Close]

BLAST of CmoCh10G010370 vs. ExPASy TrEMBL
Match: A0A1S3BRS5 (non-specific lipid transfer protein GPI-anchored 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492460 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 6.8e-59
Identity = 126/177 (71.19%), Postives = 140/177 (79.10%), Query Frame = 0


Query: 6   IFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCC 65
           I ALA   +AI GI+G   QAPAPGPA   DCFTTLLNMSDCLSYV+AGS D KP+K CC
Sbjct: 7   ILALAVATMAIEGISG---QAPAPGPAGEVDCFTTLLNMSDCLSYVTAGSNDTKPNKQCC 66

Query: 66  PELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSN 125
            ELAGLVESSP CLC+LLSDP+KVGLTIDVDRAMKLPS C +STPP++LCSLLGFPVGS 
Sbjct: 67  SELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGFPVGS- 126

Query: 126 SPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLSTL 183
                 +PAP PGVQP D GGS+T  TPG+ GNRASSIN L LAF LG+AL F+  L
Sbjct: 127 ------SPAPSPGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPAL 173

[Close]

BLAST of CmoCh10G010370 vs. ExPASy TrEMBL
Match: A0A1S3BRF5 (non-specific lipid transfer protein GPI-anchored 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492460 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.5e-58
Identity = 126/177 (71.19%), Postives = 141/177 (79.66%), Query Frame = 0


Query: 6   IFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCC 65
           I ALA   +AI GI+G   QAPAPGPA   DCFTTLLNMSDCLSYV+AGS D KP+K CC
Sbjct: 7   ILALAVATMAIEGISG---QAPAPGPAGEVDCFTTLLNMSDCLSYVTAGSNDTKPNKQCC 66

Query: 66  PELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSN 125
            ELAGLVESSP CLC+LLSDP+KVGLTIDVDRAMKLPS C +STPP++LCSLLGFPV   
Sbjct: 67  SELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGFPV--- 126

Query: 126 SPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLSTL 183
             GS+PAP+P  GVQP D GGS+T  TPG+ GNRASSIN L LAF LG+AL F+  L
Sbjct: 127 --GSSPAPSPDLGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPAL 175

[Close]

BLAST of CmoCh10G010370 vs. ExPASy TrEMBL
Match: A0A6J1DSU5 (xylogen-like protein 11 OS=Momordica charantia OX=3673 GN=LOC111024078 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.5e-53
Identity = 125/181 (69.06%), Postives = 136/181 (75.14%), Query Frame = 0


Query: 6   IFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCC 65
           IF L A II      G   + P P PA A DC TTLLNMSDCLSYVS GSKD +PDK+CC
Sbjct: 52  IFLLLAAIITSAAARGGAPKPPVPAPA-AMDCLTTLLNMSDCLSYVSIGSKDHQPDKNCC 111

Query: 66  PELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSN 125
           PELAGLVESSP CLCQLLSDP K GL IDVDRA+ LPSAC VSTPP++LCSLLG+PV   
Sbjct: 112 PELAGLVESSPQCLCQLLSDPQKTGLDIDVDRALNLPSACKVSTPPISLCSLLGYPV--T 171

Query: 126 SPGSAPAPAP---GPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLSTL 184
           SP S PAPAP    PGVQP D GG  T  TPG+SGNRASSI+RLHLAF +G+AL FL  L
Sbjct: 172 SPAS-PAPAPTTLPPGVQPPDVGGLPTNATPGNSGNRASSIDRLHLAFPIGLALAFLPKL 228

[Close]

BLAST of CmoCh10G010370 vs. TAIR 10
Match: AT3G43720.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 3.7e-25
Identity = 71/171 (41.52%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 1   MATPSIFALAAVIIAIHG-IAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKD-- 60
           M+   + A+  ++ ++ G ++  +  +P+ GP+ A DC   L+NM+ CLSYV+ G     
Sbjct: 1   MSNVVVIAVVLIVASLTGHVSAQMDMSPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGA 60

Query: 61  VKPDKHCCPELAGLVESSPSCLCQLLSD--PNKVGLTIDVDRAMKLPSACNVSTPPVNLC 120
            KPDK CCP LAGLVESSP CLC LLS     ++G+ ID  +A+KLP  C V TP  +LC
Sbjct: 61  AKPDKTCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLC 120

Query: 121 SLLGFPVGS----NSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASS 163
           SL G PVG+       G++PA APG  +   +  G    G   S G+ A S
Sbjct: 121 SLFGIPVGAPVAMGDEGASPAYAPG-SMSGAESPGGFGSGPSASRGSDAPS 170

[Close]

BLAST of CmoCh10G010370 vs. TAIR 10
Match: AT3G43720.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-24
Identity = 71/187 (37.97%), Postives = 103/187 (55.08%), Query Frame = 0


Query: 1   MATPSIFALAAVIIAIHG-IAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKD-- 60
           M+   + A+  ++ ++ G ++  +  +P+ GP+ A DC   L+NM+ CLSYV+ G     
Sbjct: 1   MSNVVVIAVVLIVASLTGHVSAQMDMSPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGA 60

Query: 61  VKPDKHCCPELAGLVESSPSCLCQLLSD--PNKVGLTIDVDRAMKLPSACNVSTPPVNLC 120
            KPDK CCP LAGLVESSP CLC LLS     ++G+ ID  +A+KLP  C V TP  +LC
Sbjct: 61  AKPDKTCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLC 120

Query: 121 SLLGFPVGS----NSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFL 179
           SL G PVG+       G++PA APG   +     GS    + GS    ++  +      +
Sbjct: 121 SLFGIPVGAPVAMGDEGASPAYAPGSMSESPGGFGSGPSASRGSDAPSSAPYSLFLNLII 180

[Close]

BLAST of CmoCh10G010370 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-20
Identity = 58/150 (38.67%), Postives = 85/150 (56.67%), Query Frame = 0


Query: 34  ATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCCPELAGLVESSPSCLCQLLSDPNKVGLTI 93
           A DC + +LNM+DCLS+V++GS  VKP+  CC  L  +V + P CLC+   +   +GLT+
Sbjct: 24  AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTL 83

Query: 94  DVDRAMKLPSACNVSTPPVNLCSLLGFPVGSNSPGSAP--APAPGPGVQPLDDGGSATPG 153
           D+ +A  LPS C V+ PP   C   G  V  + P +AP  +P  G G   L  G +A   
Sbjct: 84  DLSKAASLPSVCKVAAPPSARC---GLSVSGDPPATAPGLSPTAGAGAPALSSGANA--A 143

Query: 154 TPGSSGNRASSINRLHLAFLLGIALGFLST 182
           TP SS  R+S  + L ++F   I +  +S+
Sbjct: 144 TPVSS-PRSSDASLLSVSFAFVIFMALISS 167

[Close]

BLAST of CmoCh10G010370 vs. TAIR 10
Match: AT2G27130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19
Identity = 62/170 (36.47%), Postives = 88/170 (51.76%), Query Frame = 0


Query: 20  AGAVAQAPAP----GPAVATDCFTTLLNMSDCLSYVSAGSKDVKPDKHCCPELAGLVESS 79
           +G    AP P    GP+   +C  ++LN+SDC SYV  GS ++KP+  CCPELAG+V+SS
Sbjct: 19  SGQSPPAPEPIAADGPSSPVNCLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSS 78

Query: 80  PSCLCQLLSD--PNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFPVGSNSPGSAPAP 139
           P C+C L       + G+ +D  RA +L + C V  P  +LCS+LGFP  S      PA 
Sbjct: 79  PECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFPTIS------PAG 138

Query: 140 APGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGFLSTLL 184
           +        +D  S + G+     N A +          G+AL  L+ LL
Sbjct: 139 S--------EDSSSGSEGSDKDKKNGAMTTK------YCGVALNSLALLL 168

[Close]

BLAST of CmoCh10G010370 vs. TAIR 10
Match: AT5G64080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 3.7e-17
Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 2   ATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVATDCFTTLLNMSDCLSYVSAGSKDVKPD 61
           AT  +F +  + ++   + GA +   A  PA + DC T +LNM+DCLS+VS+G    KP+
Sbjct: 9   ATTPLFLIVLLSLSSVSVLGA-SHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPE 68

Query: 62  KHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGFP 121
             CC  L  ++++   CLC+       +G+T+++ +A  LP+AC +  P +  C L    
Sbjct: 69  GTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGL---- 128

Query: 122 VGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSI 164
             S +P +AP  APG      +  G   P    SSGN  SS+
Sbjct: 129 --SVAPSTAPGLAPGVAAAGPETAGFLAPNP--SSGNDGSSL 161

The following BLAST results are available for this feature:

BLAST of CmoCh10G010370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZH5	5.2e-24	41.52	Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana OX=37...	[more]
Q9ZQI8	3.0e-19	38.67	Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3...	[more]
Q9ZVC7	2.5e-18	36.47	Non-specific lipid transfer protein GPI-anchored 12 OS=Arabidopsis thaliana OX=3...	[more]
Q8VYI9	5.2e-16	33.33	Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE70	1.5e-15	30.41	Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of CmoCh10G010370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7Z8	3.8e-94	100.00	non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita moschata OX...	[more]
A0A6J1JCG9	3.3e-90	96.72	non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita maxima OX=3...	[more]
A0A1S3BRS5	6.8e-59	71.19	non-specific lipid transfer protein GPI-anchored 2 isoform X2 OS=Cucumis melo OX...	[more]
A0A1S3BRF5	1.5e-58	71.19	non-specific lipid transfer protein GPI-anchored 2 isoform X1 OS=Cucumis melo OX...	[more]
A0A6J1DSU5	1.5e-53	69.06	xylogen-like protein 11 OS=Momordica charantia OX=3673 GN=LOC111024078 PE=4 SV=1	[more]

BLAST of CmoCh10G010370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G43720.1	3.7e-25	41.52	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G43720.2	1.4e-24	37.97	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.1	2.1e-20	38.67	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G27130.1	1.8e-19	36.47	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G64080.1	3.7e-17	33.33	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 37..115 e-value: 2.1E-4 score: 30.6
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 22..115 e-value: 1.4E-15 score: 57.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 34..112 e-value: 2.3E-16 score: 61.4
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 34..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..158
None	No IPR available	PANTHER	PTHR33044:SF104	NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 2	coord: 12..182
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 44..107 e-value: 3.53489E-13 score: 59.7479
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 12..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G010370.1	CmoCh10G010370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005886	plasma membrane