CmoCh10G009890 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G009890
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	lysine-specific demethylase JMJ30-like isoform X1
Location	Cmo_Chr10: 5009685 .. 5013368 (-)
RNA-Seq Expression	CmoCh10G009890
Synteny	CmoCh10G009890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAATATCTTCAACCGCTAAATATCACACTTCCATAAAAGCCTCTCCGACAGAGTTCAGTTCAGCTCAGCTCAGTTCAGTTCAGCTCAATTCCATTCTTCTTCTTCTTCGATTCTGCAACAGTGACCCTTTTTCTGTTGATCAATCATGTCTTCATCGGAATCTAAACAAACCCCTTCATCCTACCATTTCGAAACCCCTCTTCTCGACGCCCAACACCCCTCCTTGCTCCACTCAATCTCCGACCAAGGTGGCTACGCCTTCGTTACCATGGCGGCTCTCGCAGCTGCCGGAGACTCATGCGCTGCCGAAACCGCCGCGGATATGGCCTGGGAGCAACTTCACTCTGGCCCCTCATCCTCTGTTCTCCCAATCTGGAGTGATGCCTACTCCATGGCTTGCCTTTACTTGGCGAGGCTCCATTTTGCTGGCGGAGAGTTTAAGGAGGCACTAAGGGTTTTGGATATGGGTCTGATCATGGGTGGTTCGCGTTTGAGGAGTGATTTGGATTCTGCCATTGCTAAGGTCTCTGCTGAGGCCAGGATTGTTAGGGTTTTGGATGTTGCGGCGGAGGATGGTCTAATGGAGAGCTCGTTGGGTTGTGATGAGCGTAATAAAGAGGTGAGATTCTTTCATCATATAATCCATGTTTCCAATTCAACTCCAAAAGATGTTCTAACGGTTCACAATGGTATTATATTGTCCACTTTTAGCATAAGCTCGGCTTTCTCAAAAGGCCGCATATCAATGAAGAGAGTATTCTTTGATTATAAACTCATGATCATTTCCTAAATTAGCCGACGTGGGACTTTCATCGTCCAACACTAACAATCGGTGGCTTTGACACATAGGTTGCTAGGGATTTGCCTGTAAAGTCTCTTACTAATAAGATGGTTGTGAAGATGTCTGGTTTATCTCTGGAGGGATTCTTGCGTGAATATTTCCAACCTGGTTTCCCTGTTATTGTTAGTGATGGTATGGCGCATTGGCCTGCTAGGACGAAGTGGAAGAGCTTGGATTACTTGCATAGGGTTGCTGGTAATCGTACAATTCCTGTTGAGGTGATTTGTTTATCTGTTTGTTTGTTTATTATCGTTATCTGTATGTTGGATAGTCTTGGATTGTGAGATTCCACGTCGGTTGGAGAGGAGAACGGAGTATTGCTTATAATGGTGTGGAAACGTCTCCCTACCAGACGTGTTTTAAAACCTAAACCCGAAAGGGAAAGCCCAAAGAGGACAATATTTGTTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAAATACCGGGCGGTTTGCTAGCGTGGACGCTGGGCTCCCAAAGGGGTGGATCGTGAGATCCCACATTGGTTGGAGAGGAGAACGAAGCATTGCTTATAAGGGTGTGGAAAGCTCTCTCTACCATACACGTTTTAAAACTTGAGGGAAAGTTCGTAGGGGAAAGCCCAAAAAAACAATATGTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCTAGACACTAGATGGTGTGCTAGCGAGGAAGTTGAGCCCTAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGAGAACGAAACATTACTTATAAGGGTGTGGAAACCTCTCCGTCTACCATACGCTTTTTAAAACTTTGAGGGGAATCCCGAAAGGGAAAACCAAAAGAGGACAATATCTGCTAGTGGTGGGTTTGGGCTGTTTCAAATGGTATCCGATCCAAACACCGGGCGGAGGATGCTGAGCTCCCAAGAAAGTGGATTGTTAGATCTCACAAGGGTGTGGAAACCTCTCTCTATCAGACGCGTTTTAAAACCTTGGGAGGAAGCCTATCATTTGATTTGTGTCCAAAATTGTGCATTAAGGTTTTTTTTTTTTGAGACAATTACACTGAAGTTGGTTGTTACTAGAATTACACATATAGAAGTTCTTTCTTGTTGTTCATCTATGTTTGTCATTGTCTGTTTCCATTGTAGCTTAACTCCTGCTGTCTCCTGCTGACTTGATATTGGAACTCATAGATTTTCCACCCCTGAACTGAAGACTTGTAAAGCTTTGATGCTTTTCAGGTTGGGAACAACTATTTACACCCACAATGGAAACAACAGCTCATTACATTTTCCGAATTTCTTGACAGGATTCAGTCCAATGATCCTTCTCATCATAATAATATCACATATCTTGCTCACCATCCATTATTTGACCAGGCATGTACCATTTTATACTCTGTATATGTATCCATGCTTGTTTCTGCGTGTTATTCAATACTTTCCTTTCTTCAAACACAGATAAATGAGCTTAGGGACGACATTTGTGTTCCTGATTATTGTTCTGTCGGTGGTGGGGAGCTAAGGTCTCTTAATGCTTGGTTTGGCCCGGATGGGATAGTAACGCCTTTACACCATGATCCTCATCACACCATGGTAGCTCAGGTTTGTACTTTTTGTGAGATTCCATATCGGTTGGAGAGAGGAATGAAACATTCCTTATAAGGGTGTGGAAACTTCTCCCTATTAGACGCGTTTTACCTTGGGCTGTTACAAATGGTATCAGAGCTAGACACTGGGTGGTGTGTCAGCGAGGACGCTGGGCTTCCAAGGGGGGTGAATTGTGAGATCCCACGTCGGTTGGAGAGGAGAACGAAATTTTCCTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACGTGTTTTAAAATCTTGAGGGGAAGCTCAGAACGGAAAGCCCAAAAAAGACAATATCTGCTAGCTGTGGACTCGCGCTGTTACAAATGGTGTCAAAACTAGACACCGGACGATATGCCAGCGAGGACACTGGGCTCCCAAGGAGGGTGAATTGTGAGATCCCACATCGGTTGCAGAGGAGAACGAAACGTTCCTTATAAGAGTGTGGAAACCTCTCCCTAGCATACACGTTCTAAAACTATAAGGGGGAGTCTGAAAGGGAAAGCCCAAAGAGAACAATATCCTCTAGTAGTGGGCTTGGGTTGTTACAAATAGTATCAGAGTTAGACACCGAGCGGTGTGCTAGCGAGGACACTGGCCCCCAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGAAGAAGAGAACAAAATATTGCTTATAAGGGTGTGGAAATTTCTCCCTAGCATACGCATTTTACAATCTTGAGGATAGTCCGAAAGGAAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGACTGTTACACTTTTAGACCATTAATACTTTTGATACTATACTTTTGATACTAAGCTGATGGCTAATCTCCCATCTCTCATGCACAGGTTTTAGGCAAAAAGTACATTAGGCTTTACGATGCGTCGTTATCCGAAGAACTTTACCCGTACAACACCGAAACTATGCTTTGCAATTCCAGCCAGGTAACCCAATCTGATAAGACAAACGTTTATGTTCTTAGCTTTTACAACGACGATGAGATCGATTCGTGCTTACAGTATAAGTCTTACTTTTGAAGGTCGATCTCGACAACATCGACGAGAAAGAGTTTGGAAAGGTGGTGGACTTGGAATTTGTGGACTGCATTCTAGAGGAAGGGGAGATGCTTTATATCCCACCAAAATGGTGGCACTATGGTCGATCCTTAACCACTAGCTTTAGTGTTAGCTTTTGGTGGAACAATTGTGATGAAAATTCAAGTGCTTCCTGA

mRNA sequence

CTAAAATATCTTCAACCGCTAAATATCACACTTCCATAAAAGCCTCTCCGACAGAGTTCAGTTCAGCTCAGCTCAGTTCAGTTCAGCTCAATTCCATTCTTCTTCTTCTTCGATTCTGCAACAGTGACCCTTTTTCTGTTGATCAATCATGTCTTCATCGGAATCTAAACAAACCCCTTCATCCTACCATTTCGAAACCCCTCTTCTCGACGCCCAACACCCCTCCTTGCTCCACTCAATCTCCGACCAAGGTGGCTACGCCTTCGTTACCATGGCGGCTCTCGCAGCTGCCGGAGACTCATGCGCTGCCGAAACCGCCGCGGATATGGCCTGGGAGCAACTTCACTCTGGCCCCTCATCCTCTGTTCTCCCAATCTGGAGTGATGCCTACTCCATGGCTTGCCTTTACTTGGCGAGGCTCCATTTTGCTGGCGGAGAGTTTAAGGAGGCACTAAGGGTTTTGGATATGGGTCTGATCATGGGTGGTTCGCGTTTGAGGAGTGATTTGGATTCTGCCATTGCTAAGGTCTCTGCTGAGGCCAGGATTGTTAGGGTTTTGGATGTTGCGGCGGAGGATGGTCTAATGGAGAGCTCGTTGGGTTGTGATGAGCGTAATAAAGAGGTTGCTAGGGATTTGCCTGTAAAGTCTCTTACTAATAAGATGGTTGTGAAGATGTCTGGTTTATCTCTGGAGGGATTCTTGCGTGAATATTTCCAACCTGGTTTCCCTGTTATTGTTAGTGATGGTATGGCGCATTGGCCTGCTAGGACGAAGTGGAAGAGCTTGGATTACTTGCATAGGGTTGCTGGTAATCGTACAATTCCTGTTGAGGTGATTTGTTTATCTGTTTGTTTGTTTATTATCGTTATCTGTATGTTGGATAGTCTTGGATTGTGAGATTCCACGTCGGTTGGAGAGGAGAACGGAGTATTGCTTATAATGGTGTGGAAACGTCTCCCTACCAGACGTGTTTTAAAACCTAAACCCGAAAGGGAAAGCCCAAAGAGGACAATATTTGTTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAAATACCGGGCGGTTTGCTAGCGTGGACGCTGGGCTCCCAAAGGGGTGGATCGTGAGATCCCACATTGGTTGGAGAGGAGAACGAAGCATTGCTTATAAGGGTGTGGAAAGCTCTCTCTACCATACACGTTTTAAAACTTGAGGGAAAGTTCGTAGGGGAAAGCCCAAAAAAACAATATGTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCTAGACACTAGATGGTGTGCTAGCGAGGAAGTTGAGCCCTAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGAGAACGAAACATTACTTATAAGGGTGTGGAAACCTCTCCGTCTACCATACGCTTTTTAAAACTTTGAGGGGAATCCCGAAAGGGAAAACCAAAAGAGGACAATATCTGCTAGTGGTGGGTTTGGGCTGTTTCAAATGGTATCCGATCCAAACACCGGGCGGAGGATGCTGAGCTCCCAAGAAAGTGGATTGTTAGATCTCACAAGGGTGTGGAAACCTCTCTCTATCAGACGCGTTTTAAAACCTTGGGAGGAAGCCTATCATTTGATTTGTGTCCAAAATTGTGCATTAAGGTTTTTTTTTTTTGAGACAATTACACTGAAGTTGGTTGTTACTAGAATTACACATATAGAAGTTCTTTCTTGTTGTTCATCTATGTTTGTCATTGTCTGTTTCCATTGTAGCTTAACTCCTGCTGTCTCCTGCTGACTTGATATTGGAACTCATAGATTTTCCACCCCTGAACTGAAGACTTGTAAAGCTTTGATGCTTTTCAGGATTCAGTCCAATGATCCTTCTCATCATAATAATATCACATATCTTGCTCACCATCCATTATTTGACCAGATAAATGAGCTTAGGGACGACATTTGTGTTCCTGATTATTGTTCTGTCGGTGGTGGGGAGCTAAGGTCTCTTAATGCTTGGTTTGGCCCGGATGGGATAGTAACGCCTTTACACCATGATCCTCATCACACCATGGTAGCTCAGGTTTTAGGCAAAAAGTACATTAGGCTTTACGATGCGTCGTTATCCGAAGAACTTTACCCGTACAACACCGAAACTATGCTTTGCAATTCCAGCCAGGTCGATCTCGACAACATCGACGAGAAAGAGTTTGGAAAGGTGGTGGACTTGGAATTTGTGGACTGCATTCTAGAGGAAGGGGAGATGCTTTATATCCCACCAAAATGGTGGCACTATGGTCGATCCTTAACCACTAGCTTTAGTGTTAGCTTTTGGTGGAACAATTGTGATGAAAATTCAAGTGCTTCCTGA

Coding sequence (CDS)

ATGCTTTTCAGGATTCAGTCCAATGATCCTTCTCATCATAATAATATCACATATCTTGCTCACCATCCATTATTTGACCAGATAAATGAGCTTAGGGACGACATTTGTGTTCCTGATTATTGTTCTGTCGGTGGTGGGGAGCTAAGGTCTCTTAATGCTTGGTTTGGCCCGGATGGGATAGTAACGCCTTTACACCATGATCCTCATCACACCATGGTAGCTCAGGTTTTAGGCAAAAAGTACATTAGGCTTTACGATGCGTCGTTATCCGAAGAACTTTACCCGTACAACACCGAAACTATGCTTTGCAATTCCAGCCAGGTCGATCTCGACAACATCGACGAGAAAGAGTTTGGAAAGGTGGTGGACTTGGAATTTGTGGACTGCATTCTAGAGGAAGGGGAGATGCTTTATATCCCACCAAAATGGTGGCACTATGGTCGATCCTTAACCACTAGCTTTAGTGTTAGCTTTTGGTGGAACAATTGTGATGAAAATTCAAGTGCTTCCTGA

Protein sequence

MLFRIQSNDPSHHNNITYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIVTPLHHDPHHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWNNCDENSSAS

Homology

[Close]

BLAST of CmoCh10G009890 vs. ExPASy Swiss-Prot
Match: Q8RWR1 (Lysine-specific demethylase JMJ30 OS=Arabidopsis thaliana OX=3702 GN=JMJ30 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 9.0e-71
Identity = 122/153 (79.74%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 17  TYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIVTPLHHDPHHTMVAQV 76
           TYLA HPLFDQINELRDDIC+PDYC VGGGEL+SLNAWFGP G VTPLHHDPHH ++AQV
Sbjct: 278 TYLAQHPLFDQINELRDDICIPDYCFVGGGELQSLNAWFGPAGTVTPLHHDPHHNILAQV 337

Query: 77  LGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGEM 136
           +GKKYIRLY + L +ELYPY +ETMLCNSSQVDLDNIDE EF K ++LEF+DCILEEGEM
Sbjct: 338 VGKKYIRLYPSFLQDELYPY-SETMLCNSSQVDLDNIDETEFPKAMELEFMDCILEEGEM 397

Query: 137 LYIPPKWWHYGRSLTTSFSVSFWWNNCDENSSA 170
           LYIPPKWWHY RSLT S SVSFWW+N  E+SS+
Sbjct: 398 LYIPPKWWHYVRSLTMSLSVSFWWSNEAESSSS 429

[Close]

BLAST of CmoCh10G009890 vs. ExPASy Swiss-Prot
Match: Q1JP61 (Bifunctional peptidase and arginyl-hydroxylase JMJD5 OS=Bos taurus OX=9913 GN=KDM8 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.6e-43
Identity = 81/149 (54.36%), Postives = 107/149 (71.81%), Query Frame = 0


Query: 15  NITYLAHHPLFDQINELRDDICVPDYCSVGGGELR--SLNAWFGPDGIVTPLHHDPHHTM 74
           +I YLA H LFDQI EL+ DI +PDYC +G GE    ++NAWFGP G V+PLH DP    
Sbjct: 259 DIGYLAQHQLFDQIPELKQDISIPDYCCLGDGEEEEITINAWFGPQGTVSPLHQDPQQNF 318

Query: 75  VAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILE 134
           +AQV+G+KYIRLY    SE LYP++T  +L N+SQVD++N D ++F +  +  F+ C+L 
Sbjct: 319 LAQVMGRKYIRLYSPQESEALYPHDTH-LLHNTSQVDVENPDLEKFPRFAEAPFLSCVLS 378

Query: 135 EGEMLYIPPKWWHYGRSLTTSFSVSFWWN 162
            GE+L+IP K WHY R+L  SFSVSFWW+
Sbjct: 379 PGEVLFIPVKHWHYVRALDLSFSVSFWWS 406

[Close]

BLAST of CmoCh10G009890 vs. ExPASy Swiss-Prot
Match: Q497B8 (Bifunctional peptidase and arginyl-hydroxylase JMJD5 OS=Rattus norvegicus OX=10116 GN=Kdm8 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.1e-43
Identity = 81/153 (52.94%), Postives = 106/153 (69.28%), Query Frame = 0


Query: 11  SHHNNITYLAHHPLFDQINELRDDICVPDYCSVGGGELR--SLNAWFGPDGIVTPLHHDP 70
           S   ++ YLA H LFDQI EL+ DI +PDYC +G GE    ++NAWFGP G ++PLH DP
Sbjct: 263 SEAKDVGYLAQHQLFDQIPELKQDISIPDYCCLGNGEEEEITINAWFGPQGTISPLHQDP 322

Query: 71  HHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVD 130
               + QVLG+KYIRLY    SE +YP+ T  +L N+SQVD++N D ++F K  +  F+ 
Sbjct: 323 QQNFLVQVLGRKYIRLYSPQESEAVYPHETH-ILHNTSQVDVENPDLEKFPKFTEAPFLS 382

Query: 131 CILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWN 162
           CIL  G+ L+IP K+WHY RSL  SFSVSFWW+
Sbjct: 383 CILSPGDTLFIPAKYWHYVRSLDLSFSVSFWWS 414

[Close]

BLAST of CmoCh10G009890 vs. ExPASy Swiss-Prot
Match: Q8N371 (Bifunctional peptidase and arginyl-hydroxylase JMJD5 OS=Homo sapiens OX=9606 GN=KDM8 PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 7.9e-43
Identity = 82/156 (52.56%), Postives = 109/156 (69.87%), Query Frame = 0


Query: 8   NDPSHHNNITYLAHHPLFDQINELRDDICVPDYCSVGGGELR--SLNAWFGPDGIVTPLH 67
           N+P    ++ YLA H LFDQI EL+ DI +PDYCS+G GE    ++NAWFGP G ++PLH
Sbjct: 265 NEP---RDVGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLH 324

Query: 68  HDPHHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLE 127
            DP    + QV+G+KYIRLY    S  LYP++T  +L N+SQVD++N D ++F K     
Sbjct: 325 QDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTH-LLHNTSQVDVENPDLEKFPKFAKAP 384

Query: 128 FVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWN 162
           F+ CIL  GE+L+IP K+WHY R+L  SFSVSFWW+
Sbjct: 385 FLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 416

[Close]

BLAST of CmoCh10G009890 vs. ExPASy Swiss-Prot
Match: Q9CXT6 (Bifunctional peptidase and arginyl-hydroxylase JMJD5 OS=Mus musculus OX=10090 GN=Kdm8 PE=1 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-42
Identity = 81/153 (52.94%), Postives = 106/153 (69.28%), Query Frame = 0


Query: 11  SHHNNITYLAHHPLFDQINELRDDICVPDYCSVGGGELR--SLNAWFGPDGIVTPLHHDP 70
           S   ++ YLA H LFDQI EL+ DI +PDYC +G GE    ++NAWFGP G ++PLH DP
Sbjct: 263 SEAKDVGYLAQHQLFDQIPELKRDISIPDYCCLGNGEEEEITINAWFGPQGTISPLHQDP 322

Query: 71  HHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVD 130
               + QVLG+KYIRLY    SE +YP+ T  +L N+SQVD++N D ++F K  +  F+ 
Sbjct: 323 QQNFLVQVLGRKYIRLYSPQESEAVYPHETH-ILHNTSQVDVENPDLEKFPKFTEAPFLS 382

Query: 131 CILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWN 162
           CIL  G+ L+IP K+WHY RSL  SFSVSFWW+
Sbjct: 383 CILSPGDTLFIPAKYWHYVRSLDLSFSVSFWWS 414

[Close]

BLAST of CmoCh10G009890 vs. ExPASy TrEMBL
Match: A0A6J1H9I2 (lysine-specific demethylase JMJ30-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461327 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 2.6e-97
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 2   LFRIQSNDPSHHNNITYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIV 61
           L RIQSNDPSHHNNITYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIV
Sbjct: 249 LDRIQSNDPSHHNNITYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIV 308

Query: 62  TPLHHDPHHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKV 121
           TPLHHDPHHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKV
Sbjct: 309 TPLHHDPHHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKV 368

Query: 122 VDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWNNCDENSSAS 171
           VDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWNNCDENSSAS
Sbjct: 369 VDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWNNCDENSSAS 417

[Close]

BLAST of CmoCh10G009890 vs. ExPASy TrEMBL
Match: A0A6J1JIR3 (lysine-specific demethylase JMJ30-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485469 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.7e-88
Identity = 158/169 (93.49%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 2   LFRIQSNDPSHHNNITYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIV 61
           L RIQSNDPSH  +ITYLAHHPLFDQINELR+DICVPDYCSVGGGELRSLNAWFGP GIV
Sbjct: 244 LDRIQSNDPSH--DITYLAHHPLFDQINELREDICVPDYCSVGGGELRSLNAWFGPAGIV 303

Query: 62  TPLHHDPHHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKV 121
           +PLHHDPHH M+AQVLGKKYIRLYDASLSEELYPY TETMLCNSSQVDLDNID+KEFGKV
Sbjct: 304 SPLHHDPHHNMLAQVLGKKYIRLYDASLSEELYPY-TETMLCNSSQVDLDNIDKKEFGKV 363

Query: 122 VDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWNNCDENSSAS 171
           VDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWNNCDENSSAS
Sbjct: 364 VDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWNNCDENSSAS 409

[Close]

BLAST of CmoCh10G009890 vs. ExPASy TrEMBL
Match: A0A6J1H813 (lysine-specific demethylase JMJ30-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461327 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.4e-82
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 2   LFRIQSNDPSHHNNITYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIV 61
           L RIQSNDPSHHNNITYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIV
Sbjct: 249 LDRIQSNDPSHHNNITYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIV 308

Query: 62  TPLHHDPHHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKV 121
           TPLHHDPHHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKV
Sbjct: 309 TPLHHDPHHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKV 368

Query: 122 VDLEFVDCILEEGEMLYIPPKWWHY 147
           VDLEFVDCILEEGEMLYIPPKWWHY
Sbjct: 369 VDLEFVDCILEEGEMLYIPPKWWHY 393

[Close]

BLAST of CmoCh10G009890 vs. ExPASy TrEMBL
Match: A0A5A7UEA3 (Putative lysine-specific demethylase JMJD5 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00210 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.3e-82
Identity = 149/169 (88.17%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 2   LFRIQSNDPSHHNNITYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIV 61
           L RIQSND S  ++ITYLA HPLFDQINELR DIC+PDYCSVGGGELRSLNAWFGP G V
Sbjct: 246 LSRIQSNDRS--DDITYLAQHPLFDQINELRKDICIPDYCSVGGGELRSLNAWFGPPGTV 305

Query: 62  TPLHHDPHHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKV 121
           TPLHHDPHH ++AQVLGKKYIRLYDASLSEELYPY TETMLCNSSQVDLDNIDEK F KV
Sbjct: 306 TPLHHDPHHNILAQVLGKKYIRLYDASLSEELYPY-TETMLCNSSQVDLDNIDEKAFPKV 365

Query: 122 VDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWNNCDENSSAS 171
           VDLEFVDCILEEGEMLYIPPKWWHY RSLTTSFSVSFWWNNCDENS++S
Sbjct: 366 VDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSFSVSFWWNNCDENSTSS 411

[Close]

BLAST of CmoCh10G009890 vs. ExPASy TrEMBL
Match: A0A0A0LXH1 (JmjC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G612920 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.3e-82
Identity = 149/169 (88.17%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 2   LFRIQSNDPSHHNNITYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIV 61
           L RIQSND S  ++ITYLA HPLFDQINELR DIC+PDYCSVGGGELRSLNAWFGP G V
Sbjct: 205 LSRIQSNDRS--DDITYLAQHPLFDQINELRKDICIPDYCSVGGGELRSLNAWFGPPGTV 264

Query: 62  TPLHHDPHHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKV 121
           TPLHHDPHH ++AQVLGKKYIRLYDASLSEELYPY TETMLCNSSQVDLDNIDEK F KV
Sbjct: 265 TPLHHDPHHNILAQVLGKKYIRLYDASLSEELYPY-TETMLCNSSQVDLDNIDEKAFPKV 324

Query: 122 VDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWNNCDENSSAS 171
           VDLEFVDCILEEGEMLYIPPKWWHY RSLTTSFSVSFWWNNCDENS++S
Sbjct: 325 VDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSFSVSFWWNNCDENSTSS 370

[Close]

BLAST of CmoCh10G009890 vs. TAIR 10
Match: AT3G20810.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 267.7 bits (683), Expect = 6.4e-72
Identity = 122/153 (79.74%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 17  TYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIVTPLHHDPHHTMVAQV 76
           TYLA HPLFDQINELRDDIC+PDYC VGGGEL+SLNAWFGP G VTPLHHDPHH ++AQV
Sbjct: 278 TYLAQHPLFDQINELRDDICIPDYCFVGGGELQSLNAWFGPAGTVTPLHHDPHHNILAQV 337

Query: 77  LGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGEM 136
           +GKKYIRLY + L +ELYPY +ETMLCNSSQVDLDNIDE EF K ++LEF+DCILEEGEM
Sbjct: 338 VGKKYIRLYPSFLQDELYPY-SETMLCNSSQVDLDNIDETEFPKAMELEFMDCILEEGEM 397

Query: 137 LYIPPKWWHYGRSLTTSFSVSFWWNNCDENSSA 170
           LYIPPKWWHY RSLT S SVSFWW+N  E+SS+
Sbjct: 398 LYIPPKWWHYVRSLTMSLSVSFWWSNEAESSSS 429

[Close]

BLAST of CmoCh10G009890 vs. TAIR 10
Match: AT3G20810.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 267.7 bits (683), Expect = 6.4e-72
Identity = 122/153 (79.74%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 17  TYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIVTPLHHDPHHTMVAQV 76
           TYLA HPLFDQINELRDDIC+PDYC VGGGEL+SLNAWFGP G VTPLHHDPHH ++AQV
Sbjct: 267 TYLAQHPLFDQINELRDDICIPDYCFVGGGELQSLNAWFGPAGTVTPLHHDPHHNILAQV 326

Query: 77  LGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGEM 136
           +GKKYIRLY + L +ELYPY +ETMLCNSSQVDLDNIDE EF K ++LEF+DCILEEGEM
Sbjct: 327 VGKKYIRLYPSFLQDELYPY-SETMLCNSSQVDLDNIDETEFPKAMELEFMDCILEEGEM 386

Query: 137 LYIPPKWWHYGRSLTTSFSVSFWWNNCDENSSA 170
           LYIPPKWWHY RSLT S SVSFWW+N  E+SS+
Sbjct: 387 LYIPPKWWHYVRSLTMSLSVSFWWSNEAESSSS 418

[Close]

BLAST of CmoCh10G009890 vs. TAIR 10
Match: AT3G20810.3 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 241.9 bits (616), Expect = 3.8e-64
Identity = 108/132 (81.82%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 17  TYLAHHPLFDQINELRDDICVPDYCSVGGGELRSLNAWFGPDGIVTPLHHDPHHTMVAQV 76
           TYLA HPLFDQINELRDDIC+PDYC VGGGEL+SLNAWFGP G VTPLHHDPHH ++AQV
Sbjct: 267 TYLAQHPLFDQINELRDDICIPDYCFVGGGELQSLNAWFGPAGTVTPLHHDPHHNILAQV 326

Query: 77  LGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLDNIDEKEFGKVVDLEFVDCILEEGEM 136
           +GKKYIRLY + L +ELYPY +ETMLCNSSQVDLDNIDE EF K ++LEF+DCILEEGEM
Sbjct: 327 VGKKYIRLYPSFLQDELYPY-SETMLCNSSQVDLDNIDETEFPKAMELEFMDCILEEGEM 386

Query: 137 LYIPPKWWHYGR 149
           LYIPPKWWHY R
Sbjct: 387 LYIPPKWWHYVR 397

[Close]

BLAST of CmoCh10G009890 vs. TAIR 10
Match: AT5G63080.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.3e-04
Identity = 29/111 (26.13%), Postives = 50/111 (45.05%), Query Frame = 0


Query: 54  WFGPDGIVTPLHHD--PHHTMVAQVLGKKYIRLYDASLSEELYPYNTETMLCNSSQVDLD 113
           + G  G  TPLH D    ++  A V GKK         S  +Y    +  + N      +
Sbjct: 166 YMGGKGSWTPLHADVFRSYSWSANVCGKKRWLFLPPPQSHLVY----DRYMKNCVYDIFE 225

Query: 114 NIDEKEFGKVVDLEFVDCILEEGEMLYIPPKWWHYGRSLTTSFSVSFWWNN 163
            ++E +F       +++CI E GE++++P  W H   +L  + S++  W N
Sbjct: 226 EVNETKFPGFKKTTWLECIQEPGEIIFVPSGWHHQVYNLEDTISINHNWLN 272

The following BLAST results are available for this feature:

BLAST of CmoCh10G009890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWR1	9.0e-71	79.74	Lysine-specific demethylase JMJ30 OS=Arabidopsis thaliana OX=3702 GN=JMJ30 PE=1 ...	[more]
Q1JP61	3.6e-43	54.36	Bifunctional peptidase and arginyl-hydroxylase JMJD5 OS=Bos taurus OX=9913 GN=KD...	[more]
Q497B8	6.1e-43	52.94	Bifunctional peptidase and arginyl-hydroxylase JMJD5 OS=Rattus norvegicus OX=101...	[more]
Q8N371	7.9e-43	52.56	Bifunctional peptidase and arginyl-hydroxylase JMJD5 OS=Homo sapiens OX=9606 GN=...	[more]
Q9CXT6	1.0e-42	52.94	Bifunctional peptidase and arginyl-hydroxylase JMJD5 OS=Mus musculus OX=10090 GN...	[more]

BLAST of CmoCh10G009890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9I2	2.6e-97	99.41	lysine-specific demethylase JMJ30-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JIR3	1.7e-88	93.49	lysine-specific demethylase JMJ30-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1H813	2.4e-82	99.31	lysine-specific demethylase JMJ30-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A5A7UEA3	5.3e-82	88.17	Putative lysine-specific demethylase JMJD5 isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A0A0LXH1	5.3e-82	88.17	JmjC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G612920 PE=4 S...	[more]

BLAST of CmoCh10G009890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20810.2	6.4e-72	79.74	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT3G20810.1	6.4e-72	79.74	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT3G20810.3	3.8e-64	81.82	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT5G63080.1	3.3e-04	26.13	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003347	JmjC domain	SMART	SM00558	cupin_9	coord: 9..169 e-value: 4.4E-4 score: 16.0
IPR003347	JmjC domain	PROSITE	PS51184	JMJC	coord: 11..170 score: 24.35631
IPR041667	Cupin-like domain 8	PFAM	PF13621	Cupin_8	coord: 4..163 e-value: 1.1E-30 score: 107.3
None	No IPR available	GENE3D	2.60.120.650	Cupin	coord: 4..169 e-value: 8.1E-51 score: 175.2
None	No IPR available	PANTHER	PTHR12461:SF86	SUBFAMILY NOT NAMED	coord: 2..167
None	No IPR available	PANTHER	PTHR12461	HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED	coord: 2..167
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 12..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G009890.1	CmoCh10G009890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity