CmoCh10G009570 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh10G009570
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr10: 4817247 .. 4821570 (+)
RNA-Seq ExpressionCmoCh10G009570
SyntenyCmoCh10G009570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACCTGTCGTCCTCTTGTGGTTGTTCACTTTCCCGTCATGCTAATTTATGAAGTCTGTAATTCAAAGTAAGATACATTACTTTCCTTAGGTTTCTATTCCTTGTGTGAATCTTTTGAAATATAGGCAATAACTACATGAGCATGGCCAGCAGATATCAACAATGTTAGGGTAAGATCACTCATCTCTTACTCATCAACCTTTTGCTATTTTTCGAGCGAATGAAACTGCTAATATCGCTCGTGTTTCATATATGCAGAAAAATTAGAGAAGCATATAGCAGGCAGAAGAATTATCCCGAGATGTATAGAGAAAGTATACCTACTTTGAGGAGTAGATCTACTATTACGACCATAGAGACGATCTCCACAAGTATCATCTTCATCAATACACACTCCTAACAGCAAATACGTATAAATTCATACATTTAGGACAGATGATTTGGTTCATGAGAGTTAGGTTTCTTCTGTGTTTATTTTGTGCCTTATTTGGGTGTGTGCTGGACCATGCTGACTAAAGAACTCCGGTCGGGTTAACTCCCTTTTACATCGTTTGTCTACACATAAGTTCTTATGTTCGTTCTTCGCGTTCATAGTTAGGTAGAATTTGAAGTTTCTGTGAAGCTCACAAGAGCCACATTTGTACATAGCAGCCAGTAGTGTAGTGTAGTGTAGTGTAGCTAACTGATGAAATGATCACAGAACTGATTGGGACCAAACAAAGTAGGAGTTGGTTTCACCTTTTCCTTTTCCTTTTCTCCTCAAGAACATAATAATTTGATGATACTATTCTTTTCTTTTTCCTTTGCTAATTGACAAAACAAGGACAAAAATGGATTTTGATTTGGTTTGTGAAAGTTTATAGCTTTAGAGGACTGTTTTGTCTCACACTGTTTGTGTTTAGGCCCACACATGGTGGAAGGACCAAGGAAGGGGTATCACATGGGGGCACTGACATGGTATAAATGGTATCAATCCAACACTCCCTTCCCTTTTCTCTCTACATTATTATTATATTACATATGTTGTTGTTGTTGTTCTTGTTTGTGATGGGCATTGTTTTGTGTGCATTGGAGGGAGTGAGGGGGGAGGCGCCAACTTTTGTACTGCCATCAATTTAAATTATTTGGTTTGGTAGCTTTTTTCTTTTTTTTCTTACAGTTTTTTGAGCTGCTTTGTTGTTCTGGCTTCCATATCAGAAGTGGTTGTGGTTGAATATGGTGCACACATGTGAACTCATCTGAGCTGTTCTCTCTTTTATTGGGCCCTTTTGATGACTTTTAAGAGATACCCACTCTCTCCATTTACTATTTACTTTTCTTAACCTTTTTATGAGTGAAACTCTTAAGTGGAGGAATCTGATTTGTATCAGTGAATGGTCATTTTTGGGGTTTGAATGAGAATTTTAGAACGACTTTGTCTCTAACAACCCAAACTCATTGCTAGCACTGCTTGGTTTTAAAATCGTGAGGTTGACGGCGATACATAATGGACCAAAATGGACAATATTTGTCAGCGGTGAGTTTGGATTGTTACATTGCTTCGGTTTGTCTCTATCAACCTCGCCCATGCCCACTGTAAGTAGATATTGTCCTCTTTAGGCTTTTCTTTTTGGACTTTTTCTCAGGGTTTTTTAAACGCGTCTACTAGGAAGAGATTTGTACACTTTCATAAAGAATGTTTTGTTCCACTCTCCAACTGATGTGGGGTCTCACAATTCACTTCCTTTCTATACCCAGTGTGTCTGGCTCTAGTACCATTTAGAACAGTTCAAGTCCACCACTAACATTTTTTATAGGGTGTGGAAATCTCTCCCTAACAAATGCGTTTTAAAATCGTGAAGCTGACGACAATACTTAATGGGCCAAATGAGACAATATCTACTAACTGTGGATTTGAGTTGTTATATTGTCTGAGTTCAAGTCCAATGTGGGATCTCACAATCTACCCTTCTTTCGGGCTTGGTATTTGACTATGATATCATCTGTAACAACCCAAACTCATTGCTAGCACTGCCTAATTTTAAAATCGTGAGGTTGATGGCAATAGATAATGGGCTAAAACAAACAATATTTGTTAGGATGAGTTTGGACTGTTACATTACTTCGGTTTGAGGGCAAAGAAGACACCATATAGAGAGAGAAACACATATTGGGAAGCACATGGGGCATCTCGTTTTGGATGCCAAGATGACTATGCATTTTGTTTTGTTATAATTCTCCATTTATTGCAAGTTTATTTTTGGTGCTTTTCCAAGATGCTTTTGAAAAATTTGGAGTCTTTCATGACTCAGTTGTGAGTGTCAGAGTTTGATGACTTTATTATATACACGTACGTATGTATATGAACTCATTTATGTACTTCTCATTATATCATGATTTGAATTTGAATTCATATCTCTTTTTGGGTGATACTTTAACCCCCACTTCCAATTTAGTTCGGTTCGATTGCATGATGTTGTGAATTGTCACATGAGCTCTAAGATGTAACGTTTTTTTGGTTCGATTTGTTTGAACTATCATTGTCGATACATGTTCGGTTTTCTTAGTAACTAAAACTGTGGTTGGTTTGATTTGGGACATTTTGTTGGTTTCGGTTGGTTTGATTCAGATTGGTGGTGTTTTTGTTAGGTGGGTCAGTTTGGTCTTCAAGAAATCGGTTTCGATGCTCGTTTTGACCAAATATATTGACCTAGAAGAACAACACGTGACTTGAATATTTTAAGACAAGATAAGAACAAATAATGGCCTTGAGCCGTCAAGAAGTGTATTATTCAAGTGGGATGCTAAAATGAAGTGAGAGAATATGAGACAACATGTTAGCTCCCTCGAGCACTCTACACTTACAAGCACATAAAACCTATCAAAAGTTAATATCATTTCACTTGACATTACTAAAGTAATTTGTATGTTTATTTGTAACAACCCATGTCCTGGATTCGACACCTAATATTGTGTCCATATTTTCCTGCATCCCTTATGACATGGTCACGTTACCTACTTCTCGTAGACAATTTGAGCTTTCATTGTCATTATACATTGATGACGGTTGTTTATGATGGTAGTTCTAGATTGTTTTTTAATTTTTTGATCAACTCAATTAAAAATAGTTACATTATTTCTCAACCAAGACTAACGTTTCATTTTTCTGATAATATCATTCAATATGGTCTTTGACCAACAACATTGCCATACGGGTCATAGTTACACGTAATGAGTACACCGCGGGCATTGTTGCACTCTACTCTTGCACATCCAATTCTTATCGAGTTTCGCCATACCACTTGTGTATAATGGCCGCACACCTTGCCAGAATCACATGAATTGGTGGCATAGTCATAGAATTGCTTTTCATCCACCCATAGCTTGACTGCGTTGGTGGCTGTCAAGTCGGGCATTCCCCATGCAAGATTCTCCCCATAAGCCCCACCCGAGTGCACCAATTTGCAGTCGTTGATGCGTTCATTGACATATTGTTGTGAATAATTTGCCAGCTTCTCATCCCATTTGATAGGATCAACACCAACTTGGGCACGAGCAGCGTTGTGGGCATTGATGTAGGCAGCAGGTGAGTTGTCTTCAACTAGAGAGAAGGGGTGAGGGAGAGCTTGAGGAAACCTTTTTTTTGGGGTCTAAAATAGACATCTAAGGAGCCGGGTAAGGCGCTCGATTGAGTTATGAAGTTTGATGTTTCGTGGAGTTAATAAATCTGTGTTTGGGGTACTGAGTTCTTTAAAGAGGAAGGACGGCACGTGGGTGGGAGTAAATAATGAAACAAACAATAGGAGTGTCTGTAGATTGAGTTGGGTCGAGTTAAGATATTCTTTTAGACCCAACTAGTTCTTTGGACGGTAAAATTTTCAACCAAAATATCACATAACTCATGAACCCAAACCAACTCAACCATAAATCTTTTGGGTTGGGTTAGTTTTGGTTGTTCGGGTCATTTATAAAATTTTCATTTATTTGAACTCAACAAATCCTAAATTGAGTCGGAAGAATTGAAGCAACGGGAGAGAAATTGAATGAGTTAATAAGTAAATTGAGTCGGTGACGTTAAGTTTTTAACCAAAACTTCATATGTTAGCCGTTTAACCAAGAGTTACGTTCCCAACTCAACTTAACCCAACCCATTATCCCAATCAGATCTATTTTAACTTTGTTTCTAAATCGATTCCTCGAACACTATATTCAGAAGCATCAAGCTCAAAACTCGAAGATATAAAAGTGAAACAAGTGATGAGAAAGAGTACCATTAGGAAGAGAGACACGACATTCAGGAATGAAGCTGCCGATGATACCCGACGTAAGTCCAAACGGTAA

mRNA sequence

ATGGCAACCTGTCGTCCTCTTGTGGTTGTTCACTTTCCCGTCATGCTAATTTATGAAGTCTGTAATTCAAAAAAAATTAGAGAAGCATATAGCAGGCAGAAGAATTATCCCGAGATGTATAGAGAAAGTATACCTACTTTGAGGAGTAGATCTACTATTACGACCATAGAGACGATCTCCACAAAAGCATCAAGCTCAAAACTCGAAGATATAAAAGTGAAACAAGTGATGAGAAAGAGTACCATTAGGAAGAGAGACACGACATTCAGGAATGAAGCTGCCGATGATACCCGACGTAAGTCCAAACGGTAA

Coding sequence (CDS)

ATGGCAACCTGTCGTCCTCTTGTGGTTGTTCACTTTCCCGTCATGCTAATTTATGAAGTCTGTAATTCAAAAAAAATTAGAGAAGCATATAGCAGGCAGAAGAATTATCCCGAGATGTATAGAGAAAGTATACCTACTTTGAGGAGTAGATCTACTATTACGACCATAGAGACGATCTCCACAAAAGCATCAAGCTCAAAACTCGAAGATATAAAAGTGAAACAAGTGATGAGAAAGAGTACCATTAGGAAGAGAGACACGACATTCAGGAATGAAGCTGCCGATGATACCCGACGTAAGTCCAAACGGTAA

Protein sequence

MATCRPLVVVHFPVMLIYEVCNSKKIREAYSRQKNYPEMYRESIPTLRSRSTITTIETISTKASSSKLEDIKVKQVMRKSTIRKRDTTFRNEAADDTRRKSKR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G009570.1CmoCh10G009570.1mRNA