CmoCh10G009090 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCTCATCCCTTCCCCACACCTCAAACCCTCCATCATCAATGGCTTCCTTCTCAAGAATCCTCTCCCCATTTTCACTGTTCCTTCTAATTCTCGCCATTTCCACCCAAACCCATCTCTCCTTTTCATCAATAGACAAACCCCTCAACCCAACAGACATCCACGAACTTCTACTCCGTTACGGTTTTCCCGCTGGTCTCTTACCCAACAATGTCAAGTCCTACACACTCTCAGACGACGGCGCCTTCGAAATCGAGCTCAAAGCCGATTGCTATGTCATGTTCAGTGAGCTGGTTTATTACGAAAAGAAAATCACGGGGAAATTGAGCTATGGGTCTGTGACCGATGTTTCTGGGATTCAAGTTAAGAAGCTGTTCTTGTGGCTCTCTGTTTCTGGGTTCAAGTCTAATCAAGGATCTGGAACCATCGTGTTCTTTGTCGGATCCTTGTCTGAAACTTTTCCGGCAGAAATGTTCCGGACGATTCCTGGTTGTAGAAGGAAGGGTTGCCTAGGAGGAAGAACAGAAGCCATGTGAGGTAATTTTGATCTGGGTTGGATTGGATTTGATGTTCTTGAGTGATTGATTGCTTGTTGAGTTTGATTTTTGCTTATGAATGTTCTTGTGAATCATGGGTCTGGAATTTGTGTTCTGAAATTTGGGTTGTTTGCTGTGATTTTGGATTTTGTTGACTGAGATTCTTGTTTGTATGATCTATCTATGTGGTTAAAATGAAGATGGAAAAGAAAATTTGAACTTTTACAACCGTCCACACCGCTAGCCGAGATTGTTTTATTTGAGCTTTTTCTTTTTGGAGTTCTCTTTAAGATTTTTAAAATGCGTCTGGTAAGAAGAGGTTTACACACTCTGATAAACAATCTTTCGTTCTCCTCTCTAACCGATGTGCACCCCTCCTTTGGGGGCAAGCATACTCGTTGGCGCTCGTTCCCCTCTTCAATCGATGTGGAATCCCTCAATCCACCCCTTTCGAGGGCTAGTGTCCTCGTTGGCACACCGCCTAGTGACCATCCTCTTTTGAGGTTCAGTCTCCTCGTTGGCACATTGCTCGGTGTCTAAGGGTGTGGAAACCTCTCCCTAACCGATGCGTTTTAAAAATCTTAAGAAAAACCTCGAAAGGAAAACCTAAAGAAAATATCTACTATACAAAGGAAAACTTAAACGGTTGTTCTTCAGTCATCTCATTAGGCCCCTTTACGCTACAATGATTTGGAAAGTTGTTAGATGATAGCAACATAGCATGAATTTCTTGTCACTAAATGATTATAATCTTCAATGTCTTCTAGATATTGTTGTGTCTTGTTTGATAATCATGCTTGTTTTTTTCCCCAAAGCTGATATTAATCTCTGTCTGTCTCTTGCAGGTGGAAATGATAGCTTTCCGAGCATGTTCATCTTTGCTTCCACAACATTAACAAAATGTTTCTTTCAATAATATTATCCTTCTACTATATCAGATTTCATTATCAAATGAAAATAATAAATTATTATCAAATGAAAATAATGAAAATTTATGTACTTTCTACTTGGTGCAAGTGTCACGATTATATTTGTTTATGACGTGTTACCTACGGCTGCATGCCCGTTAAATGTCAAACCTCTTGCATTGTATCACTTTATTGCCTTCTTTTAACGTTTTCATGATGTATAGTTTACTTCCTTTAGAGCTCTTGAACAAACTACATTATTCAGACTTTCCTTAAACAGTCCTATAGACAACTACTTCTTTAAAGCCGTGAACCATCAAGTAAAGCACACTAAGTTTTTCTTTAAATAGTCATATCTATCCGCTTAATACTATCTAGATGATTCTTTTGAAACACGTTGCCAATCTAATAAAATTTTACTATGACTACACTTTCCGGACTCCTTTATTCGACATCATAATATTTGTCAGTGCAAGTTAATCAAACCAACCTTCATCCTTAAGTATTCCAATCCAGGAGAAGATGCACAAATCAAAATGGAGGGCAGAAAGGGCAAAAGCAGATAAAACCCAAATAAGGGACACTATGGAG ATTCTCATCCCTTCCCCACACCTCAAACCCTCCATCATCAATGGCTTCCTTCTCAAGAATCCTCTCCCCATTTTCACTGTTCCTTCTAATTCTCGCCATTTCCACCCAAACCCATCTCTCCTTTTCATCAATAGACAAACCCCTCAACCCAACAGACATCCACGAACTTCTACTCCGTTACGGTTTTCCCGCTGGTCTCTTACCCAACAATGTCAAGTCCTACACACTCTCAGACGACGGCGCCTTCGAAATCGAGCTCAAAGCCGATTGCTATGTCATGTTCAGTGAGCTGGTTTATTACGAAAAGAAAATCACGGGGAAATTGAGCTATGGGTCTGTGACCGATGTTTCTGGGATTCAAGTTAAGAAGCTGTTCTTGTGGCTCTCTGTTTCTGGGTTCAAGTCTAATCAAGGATCTGGAACCATCGTGTTCTTTGTCGGATCCTTGTCTGAAACTTTTCCGGCAGAAATGTTCCGGACGATTCCTGGTTGTAGAAGGAAGGGTTGCCTAGGAGGAAGAACAGAAGCCATGTGAGTGGAAATGATAGCTTTCCGAGCATGTTCATCTTTGCTTCCACAACATTAACAAAATGTTTCTTTCAATAATATTATCCTTCTACTATATCAGATTTCATTATCAAATGAAAATAATAAATTATTATCAAATGAAAATAATGAAAATTTATGTACTTTCTACTTGGTGCAAGTGTCACGATTATATTTGTTTATGACGTGTTACCTACGGCTGCATGCCCGTTAAATGTCAAACCTCTTGCATTGTATCACTTTATTGCCTTCTTTTAACGTTTTCATGATGTATAGTTTACTTCCTTTAGAGCTCTTGAACAAACTACATTATTCAGACTTTCCTTAAACAGTCCTATAGACAACTACTTCTTTAAAGCCGTGAACCATCAAGTAAAGCACACTAAGTTTTTCTTTAAATAGTCATATCTATCCGCTTAATACTATCTAGATGATTCTTTTGAAACACGTTGCCAATCTAATAAAATTTTACTATGACTACACTTTCCGGACTCCTTTATTCGACATCATAATATTTGTCAGTGCAAGTTAATCAAACCAACCTTCATCCTTAAGTATTCCAATCCAGGAGAAGATGCACAAATCAAAATGGAGGGCAGAAAGGGCAAAAGCAGATAAAACCCAAATAAGGGACACTATGGAG ATGGCTTCCTTCTCAAGAATCCTCTCCCCATTTTCACTGTTCCTTCTAATTCTCGCCATTTCCACCCAAACCCATCTCTCCTTTTCATCAATAGACAAACCCCTCAACCCAACAGACATCCACGAACTTCTACTCCGTTACGGTTTTCCCGCTGGTCTCTTACCCAACAATGTCAAGTCCTACACACTCTCAGACGACGGCGCCTTCGAAATCGAGCTCAAAGCCGATTGCTATGTCATGTTCAGTGAGCTGGTTTATTACGAAAAGAAAATCACGGGGAAATTGAGCTATGGGTCTGTGACCGATGTTTCTGGGATTCAAGTTAAGAAGCTGTTCTTGTGGCTCTCTGTTTCTGGGTTCAAGTCTAATCAAGGATCTGGAACCATCGTGTTCTTTGTCGGATCCTTGTCTGAAACTTTTCCGGCAGAAATGTTCCGGACGATTCCTGGTTGTAGAAGGAAGGGTTGCCTAGGAGGAAGAACAGAAGCCATGTGA MASFSRILSPFSLFLLILAISTQTHLSFSSIDKPLNPTDIHELLLRYGFPAGLLPNNVKSYTLSDDGAFEIELKADCYVMFSELVYYEKKITGKLSYGSVTDVSGIQVKKLFLWLSVSGFKSNQGSGTIVFFVGSLSETFPAEMFRTIPGCRRKGCLGGRTEAM Homology
BLAST of CmoCh10G009090 vs. ExPASy TrEMBL
Match: A0A6J1H9I3 (uncharacterized protein LOC111461358 OS=Cucurbita moschata OX=3662 GN=LOC111461358 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 3.4e-86 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of CmoCh10G009090 vs. ExPASy TrEMBL
Match: A0A6J1KX25 (uncharacterized protein LOC111498989 OS=Cucurbita maxima OX=3661 GN=LOC111498989 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 6.9e-55 Identity = 111/157 (70.70%), Postives = 126/157 (80.25%), Query Frame = 0
BLAST of CmoCh10G009090 vs. ExPASy TrEMBL
Match: A0A6J1F5P9 (uncharacterized protein LOC111441073 OS=Cucurbita moschata OX=3662 GN=LOC111441073 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 1.2e-54 Identity = 111/157 (70.70%), Postives = 126/157 (80.25%), Query Frame = 0
BLAST of CmoCh10G009090 vs. ExPASy TrEMBL
Match: A0A5A7UJ73 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00410 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.7e-53 Identity = 111/164 (67.68%), Postives = 129/164 (78.66%), Query Frame = 0
BLAST of CmoCh10G009090 vs. ExPASy TrEMBL
Match: A0A1S3BPX6 (uncharacterized protein LOC103491951 OS=Cucumis melo OX=3656 GN=LOC103491951 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.7e-53 Identity = 111/164 (67.68%), Postives = 129/164 (78.66%), Query Frame = 0
BLAST of CmoCh10G009090 vs. TAIR 10
Match: AT1G55265.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 155.2 bits (391), Expect = 4.5e-38 Identity = 87/166 (52.41%), Postives = 112/166 (67.47%), Query Frame = 0
BLAST of CmoCh10G009090 vs. TAIR 10
Match: AT5G19860.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 117.9 bits (294), Expect = 7.9e-27 Identity = 64/154 (41.56%), Postives = 94/154 (61.04%), Query Frame = 0
BLAST of CmoCh10G009090 vs. TAIR 10
Match: AT5G54530.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 100.9 bits (250), Expect = 1.0e-21 Identity = 59/154 (38.31%), Postives = 80/154 (51.95%), Query Frame = 0
BLAST of CmoCh10G009090 vs. TAIR 10
Match: AT1G61667.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 87.8 bits (216), Expect = 8.7e-18 Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 0
BLAST of CmoCh10G009090 vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 82.0 bits (201), Expect = 4.8e-16 Identity = 39/114 (34.21%), Postives = 64/114 (56.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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