CmoCh10G008890 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G008890
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	YTH domain-containing protein
Location	Cmo_Chr10: 4318969 .. 4327567 (+)
RNA-Seq Expression	CmoCh10G008890
Synteny	CmoCh10G008890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATATTGGCTCGTAAAACCTAAAACCCTTTTTATTATCTTGCATTCAAATCCCAAAATCCCTCTCAAATTTCCCCTTTGATTATCTCCCACCTCAATTTTCCCTCCCAATCTGCTTGCGTTTGAGTTTTTCTACCTCACTTCTGTTCCTGGATCTCTGTTTTTATGGAACGTTCCGACGAGGAGCATCGAATCGCTCCTATTGGTATGTTATCTGCATCTTGTTTGACTACTGATTAATTCCGTCTTCTTTCTGGTTTTGAATTGTGTTCCTTGTCAAATTGCCAGTTCTTTTTCGGAATTGTGCTATGTTAACTTCTGTATGATGAGATTTTGTCTGTTTTTGATTTGCGAAATTGAACATGAGTGATTACGGGAGCGATTGGTTTTGGATTATTGGGTCTGTGAATTGGGATTTTGCTGAAGAACATTTTGATTTACCCGTTTATATGCTAGAAAAAAGAAAAAAAAGCGCCGACAGAGAGCTAAATCATTGTAGTTTTTGTTTTTTTTACTCTTTTTTCTTCCGGTCTTTGAATTGACACGGACCAGCTGACAGTCGATCATCATTGATCTGTCTAAGATCTTCATAGACTGAGAAAGTACCTTGATTATTACTCCAATAAGGTTTAACAGGTCAAGGTACTCAGTAATCCACTTTCTTATTCTTGGTCTTAATTCGTTGAAGGGGAAGATATTTCCGGTTATGTGACCATCTTCTAGGGTGCAGAAATATAAGCCGAATGTGTGTATGGACTTACTGGGATCTTAATGAGGAAAAATTAATTCTACAAATGGGTATTTTCTATGTACTTTTATCCTCTATAGGGGCACTGAACAATCGATTATTTATGCAGGAGAAAGATCTCTTAGGCAAGATAACCTGAAAGAGCCGGTAAGGCTGCTGAATTCCTTTAGAATGTTTTCCCTTGTATTTGCTTTGCATGTTTATAGGTTTTGACAATTGATGTTTACTTCTGGTATTTTTTTCCCGATTCATTACCAGCAACTCTCACCTAAAGGTGGAAGAATTGCTTCAACAAATCCTTCTCCAAATGCAGTAGTTATTGGACCTTCAAGGGATGCCATAGAAAAGACTATGGATGCAGGAACAAGTATTAGCAGTGTTCACCCGTTGAATGTATATGCGTCACATGAACCAAATGTACAATATGGTGGTTAGTTCTCCAACCCTCACTTCTGGTATCCATTTAGGATTGGGACATCTTGTATTCTTCTTGTCGTAGGATAAGTATCAAGAGGCTTGAAGCTGAGATTTTGGAGAGAATCTCAGAACATCCTAAGCCCTCTACACCACCTCTCGGGGACCTGTGATCTTTCTTTGATATCCTTGGAAAGGAAGCCGGAAAAGATCATTACTGTAGCTGGAAAGGAAGCCGGAAAAGATCATTACTGTAGCAAGCTTTCTATCCATAGCAATATTAGACTGTTTCAGTGTTTTCAGCTTGCACACAAAACTTTTAAAGCTCAGGTGCTAAAACCCCTCCTCAGACGTCCAGTTTCCTCTAGGAGGGAGACCAATATTAGAAAGGGGTGGTTCATTGATGTTATAATGGTATCTGACAGCTACCTATTGACATCTTCCCTGGCCCAATATATATCCATAACCAAGAATGTTGACATCACTTTCAAGCCTAAAGCCAGCCTCTTCAAAGAAGGTCCCTTCAAAGATTTTTTCATCCTAAACAAATTATTTTTTTGATAGGAAATCTTAAACAAATTATAGGATGAGAAAAGGATATTTTCAGCTTATAGTTGGAGATAATTATGGAGAAATACCATAATAAGGAATCACCCCAAGGGAAGGTAAGATTCGGATTACCTCGTTGATCAAATATTTCAAGGTAAGAACACTTGTTTGAGATTTTACTCACTTTACAAGCAAGATTGATCATGTCTCAGCCATTGGAAGATTCTCATTCCTTTCTTGTTAAGTTATCCCATAGAAAGCTCTAAAAGAATTAAATTGAGCCACAATGCATTTGCTTTCTTTTTGAAGGGGTGCCTGCATAAAGCCTTACAAAAAAAAAAAATTATAAACTCCCCCTGGAGCCATAAAAGTCAAACTAATCCTTCCAAACTTTTTGCTCAAAACCAGGAGAAGAGGAGCGCCACAACAAATTTCACCATTTTAAAACAAAACATAAGATACCAAGCTGGGACACAAAAGCTTGAGTTTCTTGGAATAGCGTTGATTCCAAATCACATGGTAAAAATCGCTGAGTATTGTCCCATCAGTTGAGAACACCTCTTGTATATATGGGATAAGAAGTCTAGCTTCTCATTTCGGTTGCTTCTGAACACCTTTTGTAATACTGTTTGTTCATATATCAGTCTTTACAGGATCCTGGCTATTAGTAGGTTGCTTTTGTGCATCATAGGGAATTCCCGACTGAGTTGAACACAGCTCTAACTGACATATAGGGGACAAGAAATCTTGTTCTTCTCGTGTGCTTTTGACACCTTTTGATAAGAATTCTGGTTACTAATTTGTTATATATTAGTTTTCACAGATTGTTACAAATTTTTTCACTCCTATGTCTGACAAATTATCTTCCAACATGTCGTGTCTTTGTGTTGACTTCAGGGTATGGAGGAAGCAGTGCTGGTTCTTGGGATGCTTATTCACAATATGTAAATGCTGACAGTTTTCCTGTTGTATCACCAGTGAGTTTTACTTTTGAAAACATGATCTTATATCCATTTAAAAATAGATTATATATGCCTAATTCACTCTTTGATTTGCACATGGATCAGGTTATGTACAATGACAATCCATCTATTGTCTTCCATTCTGGTTATGGTTTTAATCCAGATATGGCATATGGACAATATTCACCGGTTGCTACCCCTATGCCTTCTGTTATGTTAGATGGACAAGTATATCCTCCTCAACAAGTCCCATTCTCCCCATCATACTACACACAACAAGCTGCACCATGTTTACCTCATGGATCTTCTGCAGTTCCCGTTTCACCAACAGAGATGATATCACCTGAGAGTAGTACATTCGACAACATGCTTTATGGGCCAGGAACAGGTTTTTTGCTAAATTTTGGGTCCTTTGGTGGTGGAAATTTGGGTTCAGGTTCTTTATCATCTCCGGCAGCTTATCCACAACCAATGGGAATGCTTGGCTCAAATGATCAGAATGTCGGGCAGGTTTGTTTGTTTACTTAATCACAATATGGTGATAGTTAGGAAAGGTTATTATAGATGCTTCTACAACCTAAAATCGCTGTTTGGTATTGCTTGTATTGACCTACACTGAGCTGTTTTGTATCACATTTTATCCCCAGAATATCTTATTGTCATCTTAATATTTACTGATAAGAAATCTTGTATTATGTCCTTAAAAGAAATTAGATAAGGAAGAAATATTATAGTAATAACGAATGATAAATTAAATGCCAACCTAAATATTATCCTTGATAATAGAATATGTTGTTACTTAATACTCGTATTACCCAGAGAACAACGTTGGTTTTCATGTTCTCTTCGTTCTTGTTCTGCTTTTGCTTTTCTAATGTAAAATGTAAATCATGTGGCTACGTCTTGATGAATCTTCAAATACAGAATTCCTTAGTATAAAAGACCAAATAATTTTCTTTCCTCTCTAAAATTATTTAAGAAGTCAAATTGATGAAGAGACCTATTAACGATATCAAATGCGTTTAATTTTATCTTATGTGCTTGAGCTTGCTTACTGAAAGTACTCAATCCATTCAAGAGAGAAGAAATCAGGTAGAAACTAGGGATGAATCCATGTCAGTCGAACTAGTTTCTTGACATCAAATATTCAAGGTTTGTGTAAGCAAGAGGGCAAGTTGTATAAATACATTTGATTTTATAAATTCAAGTTTTCGATGGCGTTTGGTTAAGAAGCAGGTATTTTACTGATATATTGACTTCAAATGTTGCAAGGACAAGTAAATAAATTGGGGCCAATTTGTAAGAGTTTGAGATGTAAGGTGGTATTTCATATTTGATTCCCTGTTATCATGGGTGACTATCAAGGGCTAATTTATCCTCATTTTGGGAGGATACTTGTGATAATTTTTGGATTAATTTCTTAGAATTCAAGGACAGTTCTATGACCTATAGAACAAATCCTATATAAGTTTGTTTTGATTGCTTTCTTTTAGTGTGAGTTTTACATTGGTCGATAAGGTAGGGATCTATTGATTATCTTGTTTCTGAAAAATCATTATACTTTCATGCAGATATGTGTCGTAGTTTTGAGGTTATAGCTTGGAGCTAGCATGAGGGCATGAGACTTGAAAACCTTTTAAAACATTGGCCTTAGTTACCTAGTTTCTTAGTTAGGTCGAGAGAAGATTTATTGTTAATGAGCTTGAGCTAACTAGTTAGCGTTTTTTTTTTTGCTTTATTTCCGTGGCCATCCATCACATTATCATGTAGTTGAGTGAAACTATGGTGTTGTGTCTACTGTCAAAACCTTTATTTATGTTATACTTGTACATTCTTGTCCTTTTGATAAGACTATTATTTTGGTTCTAATTATAGATTTTTATTCTTTTATCTCGTCATTAACTTGTTTTCATTTTAGGTTTCCTTACAACAGAGACATATGCATGGATTTGGATTGGTTTCAAGTGCATTTGATGCTCGGTACCCATTAAGCAATTCTTATCAGGGTTCTAACTTTGGCAGTGCATCAATTTCTTATCCAGTTGTAAGTGACCGAAGCCGACTTGTCCTTGGGAAGGACAGAGGAAGAGACAGGGACCGGGACTCAATTTCAGTTTTTAATGATCCGTATGGTATCTTTAGTGACCGTAATCGGGGGCCAAGAGCTTTGAAGGTCAAGGGAAAAGGAGAACTAGGTGCTGCATCTGGTGCAAGCAAAAATGATTTATCAACTTCATTAATTAGTCCTGATTCCTACAATCGGCCAAATTTTGCTACAGATTATGAGACTGCCAAGTTTTTCGTTATCAAGTCATTTAGTGAAGATAATGTTCACAGAAGTATCAAGTACAAAGTTTGGGCTAGTACTCCACATGGTAACAAGAAACTGGATGCTGCTTACCGTGAGGCAAAAGAGATGCAAGGAAATTGTCCAGTTTTTCTCTTTTTCTCCGTGAGTTCTGGAGACTTATCTCATTAAAAACTTCCTTTTTTGCCTGACGGAAATCTTGTTCCTTCTTTGGGGTTTGGGGAGAGCTCATTCCTGCCTTAGTCATATGTATTGAGAGGTAGTCAAGGAGCTTGCAGGAGGAAAATAAGAAACCATAGATGTGCCTTTTGGCGTTGCATGTTCTCCTTTGGGGAAGTGTCAATTTATGTGGCCACTAAAACCAACTTATCTTTTCCTGGAATAGTTTTGATGAAAATTGTTAAACAAAAGAACTAAATGCTTCTTCTTAAAGTTATCAAGAATTTTGCACATTGTGTATGTACTATGCATCATCAAGGGCAGGACTTTAGTTTTTGGGTCAGAGTGGAGAATGAAATTATTTATAATATTCAAGTTATGGCATTTATTAAAATCTTGTGGCCACATTAGGTAGCTTCTTTAACATCAACTGTTTGCGAATTAGTGGAATTGATTCTCCATCCTCATATTTGTGGGTTCTATCGTCTTGCATCTTGTTGCATAGTTTCAATCGTTCATTATTTTTATGGACCACAGTTCTTAGTGGATTATATTGTATGAGCAATTTTGTCGTGTTTTCTTGCAGGTTAATGCCAGTGGTCAATTTTGTGGTGTAGCTGAAATGGCTGGACCTGTTGACTTTGAGGAAAATGTAGATTACTGGCAGCAAGATAGGTGGAGTGGACAATTTCCTGTTAAGTGGCACATCATCAAAGATGTTCCTAATATTAGATTTCGGCATGTTTTACTTGAAAATAATGACAGCAAACCTGTTACACACAGCAGGGATTCTCAGGAGGTATCATTTCATATCGATAATTCTTTAATAATGCATCCTCATCTATGTGGATGAAGCAAAAATGTATACCGATATTTGTTGTTAGGTAGAGCCTGTACTACTAGGCCATTACTATGTTTAGATTATAACCGAGTAATATTTGGCAAGAAGCTTCAAAAACTCATGTCACGAAGGCTCATGTTCTTTTTTTTTTCTTTTTTTTTTTAAATTTTATTTAATCTTTGTCCTGCAAATCAAGTTGTTCTTAGGTTTGGTATAATATTTATATTTTCATTGACCTACCCACTCAAATTCCTTACCCAACGTGTACCCTTGTCAAAAAGAGGATTAAATGTGAGAGAGGTCCTAGTGTCGTTTGGTCTCTCATTAGGTTTTATGTTTCTTTTTGGGTATAGGTGGCGAAGTGTTTCTGTTATTATTGAACAGGTCTTATTCTTCTTGGTTAGAGTCTCTTTTTCTATTTTTTCTCATTGAAGGTATGGCATTTCAATAAAATAAATAAATAATAAAATGAGTGTTCTTCGAACTATTGAGATTGAATGACTAAGGAGTTAGTTTTGAAACTATAGAGATTGAATAGAAACTAAAATTATCGGGACCATGTTGTCCATAGAAAAAAAAGTTATTGACCTGCTATCTAACTGTGATACGTGAACTTCTGTAGAGCTTTATTTATGTTACCTTTTACCCTATATTTGTACTTGCGCTTGGGGTACTTAGTCGATGAGCGCTTTGCATTATCGTATATGTACAAGTAAATTTTGTTAGTCCTTCCCATCATGCTTCCTGATGTTATTTATTTATTTATGCCATACATTGACAGGTGCCGCTGAAACAAGGTATTGAGATGTTGAAAATTTTCAAGGACCATGATCCTCGAACATCTATTATAGATGATTTTGATTTCTATGATGAGCGGGAGAGGATTTTGAAAGAAAGGAAAACAAAACAACAGCTATTTGCAACTGCAAATTCTCTAAATCCACTTGGTGATGGTTCCATTAACCCAATTTCTGATCAGTTTGCTCAAGCCTTACGACTTGATGATAATAAGAAAGAAAAACCAGAAATGGAAAAGGGTGCAACATCTAGAATAGATGCCTCAGTTTCACTTGATGATTCGGTAAAATAAAGTTCTGAGACTTCTTCCAGTCATGCAGCTGAGAGACAGACTAAGTATTAAGGGAGTCCAAGCATTGAAAGGTGGATACGGCTAGCAGAATTGAGTATTTTTCCGTATGATTGGACTCCTTTGATTCCTTGAGCCTTAGATGAACGGGTTTGATAGGTATTTGGCATCCTGAGACACCCTTTATGACTGATTTTCTGTTCTCCAATAGCTGATAACATCTGAGGCAGTAGTTTGAAAATCTATAGCAGTGAAGATGATATCTGACGCTTTTTTACCATTTTTTCATGTTCAATTGCCCACAAAGCAGCTGGAGGAAAATTGTTGCGCTTGGCAAGAAGCTTTCCTGATCAAACATTGCTTAATTTGCACTGAATTTTCCCTTTCCCTTTCCCTTTCCCTTTCCCTTGGAGGGTTTTGATGGCATTTCTCGAATGGGAGGATTTTGCTGATGGGGGTGGGTTAGTTAGGTGGGATTTTACGTTGCAAGTGTGCATAGATTATGTTTGCATTTCTCATCGATAGTCCAAGTGCTGCTGCGGTATCTATAGAGTTACCCATTTGGTGAAGCAGATTAATAAAGGAGTTTTATAAATTTCTTTGTTTTAGGGAGTTTACTTGTTTTATTTGATATTTTCTTATGGGGGGTGCTATCCTAGGGCAACTGCTGTGAATTTTACGACACACGACAGGATTATTTAGCGTGAGGGCGGGGGCTACTTCATGTTCTTGTCCTTCTGTTTTTTTCGCCTTTGTGTTTTTTTTAATGTCTGCTATACTATTCTATATGTCTCTAATGTCTAGACCACAAGGAACTTCTGAAGGAGCTTGAGGAGATAGATTTGATGAGATGACTCTGAAATTGTATTTTGCTGTTTAAGTCAGTTTCTTTGTGCATACCTTCCTATTATTCTGCTTTTGAACAGGTTCTTCGAAGTGAGTCGAATTCTCCAGCAAGACCGTAGCATGTCGTTGCTTCAAGACGGGATATCCGATCTACAGGAACACTCCCCGAAGCCTTCAGGCCAGGTTTTCACTATAGTAACTAATTGTTGATCTGCTTTTTCTTTTCTTCTTTTTGCCATAGAACACTGCATTTGAAATTTTCAGGTTTTTCTACCGATATATCATCGTGCAGACGTTTGAAAATGACGTTTAAAAGGTCTGCTTTTGAAGTATTTTCGAATGGTTGTAGAACTATCACTTGTGTTTCTCTCGTTGCTCTTGATGATGAACTTGATGAGATTCCTTAGAACTTTGAAAATGCCTCCTTGCTTTATAGTATTTATGTAACACTCTAGATCCACCGCTAGCAGATATTGTCTTCTTTGGGTTTTCCTTTTCGGGCTTTCCCTCAAGGCTTTAAAACGCGTTTGCTAGGGGAAGGTTTCTACACCCTTATAAATGGTGGTTTATTCTCCTCCCCAATCAATGTGGGACATCACAATTTAGAAAACACCGATGATTCATTAGCCTTACTCTACGATGGAGCTGGAGCTGGAGATGGAGATGGCTGGAACTTTTGTGGTA

mRNA sequence

AAAAATATTGGCTCGTAAAACCTAAAACCCTTTTTATTATCTTGCATTCAAATCCCAAAATCCCTCTCAAATTTCCCCTTTGATTATCTCCCACCTCAATTTTCCCTCCCAATCTGCTTGCGTTTGAGTTTTTCTACCTCACTTCTGTTCCTGGATCTCTGTTTTTATGGAACGTTCCGACGAGGAGCATCGAATCGCTCCTATTGGAGAAAGATCTCTTAGGCAAGATAACCTGAAAGAGCCGCAACTCTCACCTAAAGGTGGAAGAATTGCTTCAACAAATCCTTCTCCAAATGCAGTAGTTATTGGACCTTCAAGGGATGCCATAGAAAAGACTATGGATGCAGGAACAAGTATTAGCAGTGTTCACCCGTTGAATGTATATGCGTCACATGAACCAAATGTACAATATGGTGGGTATGGAGGAAGCAGTGCTGGTTCTTGGGATGCTTATTCACAATATGTAAATGCTGACAGTTTTCCTGTTGTATCACCAGTTATGTACAATGACAATCCATCTATTGTCTTCCATTCTGGTTATGGTTTTAATCCAGATATGGCATATGGACAATATTCACCGGTTGCTACCCCTATGCCTTCTGTTATGTTAGATGGACAAGTATATCCTCCTCAACAAGTCCCATTCTCCCCATCATACTACACACAACAAGCTGCACCATGTTTACCTCATGGATCTTCTGCAGTTCCCGTTTCACCAACAGAGATGATATCACCTGAGAGTAGTACATTCGACAACATGCTTTATGGGCCAGGAACAGGTTTTTTGCTAAATTTTGGGTCCTTTGGTGGTGGAAATTTGGGTTCAGGTTCTTTATCATCTCCGGCAGCTTATCCACAACCAATGGGAATGCTTGGCTCAAATGATCAGAATGTCGGGCAGGTTTCCTTACAACAGAGACATATGCATGGATTTGGATTGGTTTCAAGTGCATTTGATGCTCGGTACCCATTAAGCAATTCTTATCAGGGTTCTAACTTTGGCAGTGCATCAATTTCTTATCCAGTTGTAAGTGACCGAAGCCGACTTGTCCTTGGGAAGGACAGAGGAAGAGACAGGGACCGGGACTCAATTTCAGTTTTTAATGATCCGTATGGTATCTTTAGTGACCGTAATCGGGGGCCAAGAGCTTTGAAGGTCAAGGGAAAAGGAGAACTAGGTGCTGCATCTGGTGCAAGCAAAAATGATTTATCAACTTCATTAATTAGTCCTGATTCCTACAATCGGCCAAATTTTGCTACAGATTATGAGACTGCCAAGTTTTTCGTTATCAAGTCATTTAGTGAAGATAATGTTCACAGAAGTATCAAGTACAAAGTTTGGGCTAGTACTCCACATGGTAACAAGAAACTGGATGCTGCTTACCGTGAGGCAAAAGAGATGCAAGGAAATTGTCCAGTTTTTCTCTTTTTCTCCGTTAATGCCAGTGGTCAATTTTGTGGTGTAGCTGAAATGGCTGGACCTGTTGACTTTGAGGAAAATGTAGATTACTGGCAGCAAGATAGGTGGAGTGGACAATTTCCTGTTAAGTGGCACATCATCAAAGATGTTCCTAATATTAGATTTCGGCATGTTTTACTTGAAAATAATGACAGCAAACCTGTTACACACAGCAGGGATTCTCAGGAGGTGCCGCTGAAACAAGGTATTGAGATGTTGAAAATTTTCAAGGACCATGATCCTCGAACATCTATTATAGATGATTTTGATTTCTATGATGAGCGGGAGAGGATTTTGAAAGAAAGGAAAACAAAACAACAGCTATTTGCAACTGCAAATTCTCTAAATCCACTTGGTGATGGTTCCATTAACCCAATTTCTGATCAGTTTGCTCAAGCCTTACGACTTGATGATAATAAGAAAGAAAAACCAGAAATGGAAAAGGGTGCAACATCTAGAATAGATGCCTCAGTTTCACTTGATGATTCGGTAAAATAAAGTTCTGAGACTTCTTCCAGTCATGCAGCTGAGAGACAGACTAAGTATTAAGGGAGTCCAAGCATTGAAAGGTGGATACGGCTAGCAGAATTGAGTATTTTTCCGTATGATTGGACTCCTTTGATTCCTTGAGCCTTAGATGAACGGGTTTGATAGGTTCTTCGAAGTGAGTCGAATTCTCCAGCAAGACCGTAGCATGTCGTTGCTTCAAGACGGGATATCCGATCTACAGGAACACTCCCCGAAGCCTTCAGGCCAGGTTTTCACTATAGTAACTAATTGTTGATCTGCTTTTTCTTTTCTTCTTTTTGCCATAGAACACTGCATTTGAAATTTTCAGGTTTTTCTACCGATATATCATCGTGCAGACGTTTGAAAATGACGTTTAAAAGGTCTGCTTTTGAAGTATTTTCGAATGGTTGTAGAACTATCACTTGTGTTTCTCTCGTTGCTCTTGATGATGAACTTGATGAGATTCCTTAGAACTTTGAAAATGCCTCCTTGCTTTATAGTATTTATGTAACACTCTAGATCCACCGCTAGCAGATATTGTCTTCTTTGGGTTTTCCTTTTCGGGCTTTCCCTCAAGGCTTTAAAACGCGTTTGCTAGGGGAAGGTTTCTACACCCTTATAAATGGTGGTTTATTCTCCTCCCCAATCAATGTGGGACATCACAATTTAGAAAACACCGATGATTCATTAGCCTTACTCTACGATGGAGCTGGAGCTGGAGATGGAGATGGCTGGAACTTTTGTGGTA

Coding sequence (CDS)

ATGGAACGTTCCGACGAGGAGCATCGAATCGCTCCTATTGGAGAAAGATCTCTTAGGCAAGATAACCTGAAAGAGCCGCAACTCTCACCTAAAGGTGGAAGAATTGCTTCAACAAATCCTTCTCCAAATGCAGTAGTTATTGGACCTTCAAGGGATGCCATAGAAAAGACTATGGATGCAGGAACAAGTATTAGCAGTGTTCACCCGTTGAATGTATATGCGTCACATGAACCAAATGTACAATATGGTGGGTATGGAGGAAGCAGTGCTGGTTCTTGGGATGCTTATTCACAATATGTAAATGCTGACAGTTTTCCTGTTGTATCACCAGTTATGTACAATGACAATCCATCTATTGTCTTCCATTCTGGTTATGGTTTTAATCCAGATATGGCATATGGACAATATTCACCGGTTGCTACCCCTATGCCTTCTGTTATGTTAGATGGACAAGTATATCCTCCTCAACAAGTCCCATTCTCCCCATCATACTACACACAACAAGCTGCACCATGTTTACCTCATGGATCTTCTGCAGTTCCCGTTTCACCAACAGAGATGATATCACCTGAGAGTAGTACATTCGACAACATGCTTTATGGGCCAGGAACAGGTTTTTTGCTAAATTTTGGGTCCTTTGGTGGTGGAAATTTGGGTTCAGGTTCTTTATCATCTCCGGCAGCTTATCCACAACCAATGGGAATGCTTGGCTCAAATGATCAGAATGTCGGGCAGGTTTCCTTACAACAGAGACATATGCATGGATTTGGATTGGTTTCAAGTGCATTTGATGCTCGGTACCCATTAAGCAATTCTTATCAGGGTTCTAACTTTGGCAGTGCATCAATTTCTTATCCAGTTGTAAGTGACCGAAGCCGACTTGTCCTTGGGAAGGACAGAGGAAGAGACAGGGACCGGGACTCAATTTCAGTTTTTAATGATCCGTATGGTATCTTTAGTGACCGTAATCGGGGGCCAAGAGCTTTGAAGGTCAAGGGAAAAGGAGAACTAGGTGCTGCATCTGGTGCAAGCAAAAATGATTTATCAACTTCATTAATTAGTCCTGATTCCTACAATCGGCCAAATTTTGCTACAGATTATGAGACTGCCAAGTTTTTCGTTATCAAGTCATTTAGTGAAGATAATGTTCACAGAAGTATCAAGTACAAAGTTTGGGCTAGTACTCCACATGGTAACAAGAAACTGGATGCTGCTTACCGTGAGGCAAAAGAGATGCAAGGAAATTGTCCAGTTTTTCTCTTTTTCTCCGTTAATGCCAGTGGTCAATTTTGTGGTGTAGCTGAAATGGCTGGACCTGTTGACTTTGAGGAAAATGTAGATTACTGGCAGCAAGATAGGTGGAGTGGACAATTTCCTGTTAAGTGGCACATCATCAAAGATGTTCCTAATATTAGATTTCGGCATGTTTTACTTGAAAATAATGACAGCAAACCTGTTACACACAGCAGGGATTCTCAGGAGGTGCCGCTGAAACAAGGTATTGAGATGTTGAAAATTTTCAAGGACCATGATCCTCGAACATCTATTATAGATGATTTTGATTTCTATGATGAGCGGGAGAGGATTTTGAAAGAAAGGAAAACAAAACAACAGCTATTTGCAACTGCAAATTCTCTAAATCCACTTGGTGATGGTTCCATTAACCCAATTTCTGATCAGTTTGCTCAAGCCTTACGACTTGATGATAATAAGAAAGAAAAACCAGAAATGGAAAAGGGTGCAACATCTAGAATAGATGCCTCAGTTTCACTTGATGATTCGGTAAAATAA

Protein sequence

MERSDEEHRIAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVVIGPSRDAIEKTMDAGTSISSVHPLNVYASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNPSIVFHSGYGFNPDMAYGQYSPVATPMPSVMLDGQVYPPQQVPFSPSYYTQQAAPCLPHGSSAVPVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLSSPAAYPQPMGMLGSNDQNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSYQGSNFGSASISYPVVSDRSRLVLGKDRGRDRDRDSISVFNDPYGIFSDRNRGPRALKVKGKGELGAASGASKNDLSTSLISPDSYNRPNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNCPVFLFFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHVLLENNDSKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTKQQLFATANSLNPLGDGSINPISDQFAQALRLDDNKKEKPEMEKGATSRIDASVSLDDSVK

Homology

[Close]

BLAST of CmoCh10G008890 vs. ExPASy Swiss-Prot
Match: A0A1P8AS03 (YTH domain-containing protein ECT4 OS=Arabidopsis thaliana OX=3702 GN=ECT4 PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.9e-77
Identity = 219/606 (36.14%), Postives = 313/606 (51.65%), Query Frame = 0


Query: 10  IAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVVIG-PSRDAIEKTMDAGTSISSVH 69
           +AP  +++   D LK+  L  K   +    P+    V    + D+  +      S+S + 
Sbjct: 4   VAPPADQA--ADVLKKLSLDSKSRTLEIPEPTKKTGVYQYGAMDSNGQVPSFDRSLSPML 63

Query: 70  P---LNVYASHEPNV----QYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNPSIVF 129
           P   L+    + PNV     Y GYG         Y+ Y N++S  + S   Y +N S+V+
Sbjct: 64  PSDALDPSVFYVPNVYQQPYYYGYGSD-------YTGYTNSESVDMTSGA-YGENASLVY 123

Query: 130 HSGYGFNPDMAYGQYSPVATPMPSVMLDGQVYPPQQVPFSPSYYTQQAAPCLPHGSSAVP 189
             GYG+    A   YSP  +P P +  DGQ+Y  QQ  + P   T  + P     +S+VP
Sbjct: 124 PQGYGY----AAFPYSPATSPAPQLGGDGQLYGAQQYQY-PFPLTASSGPF----ASSVP 183

Query: 190 VSPTEMISPE------SSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLSSPAAYPQPMGM 249
            S    +S        S+     + G      LN  +  G +   G L+  A Y  P   
Sbjct: 184 ASTQSKLSTNKAANSASAGIPKGMNGSAPVKPLNQSALYGNSALGGGLA--AGYQDPRYS 243

Query: 250 L-----------GSNDQNVGQVSLQQRHMHGFGLVSSAFDARYPL---------SNSYQG 309
                       GSN  +V      QR + G G+ SS   A   +         SNS+  
Sbjct: 244 YDGFYTPVSWHDGSNFSDV------QRSVSGSGVASSYSKANNNVPATRNQNSSSNSHYT 303

Query: 310 SNFGSASIS-------YPVVSD-----------RSRLVLG--------KDRG-------- 369
           S +  AS++       Y  VS            RS +  G         +RG        
Sbjct: 304 SMYQPASMTGYAAQGYYDRVSPNKSYGQYGSTVRSGMGYGSSGYGSRTNERGWLNTDNKY 363

Query: 370 RDRDR-DSISVFNDPYGIFSDRNRGPRALKVKGKGELGAAS------GASKNDLSTSLIS 429
           R R R +S    N+     ++ NRGPRA   K   E+ +          S  + + + + 
Sbjct: 364 RSRGRGNSYFYGNENIDGLNELNRGPRAKGTKATEEVSSEEVKKQTFDESNTEETVTCVL 423

Query: 430 PD--SYNRPNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEM 489
           PD    NR +F  +Y+ AKFF+IKS+SED+VH+SIKY VWASTP+GNKKLDAAY+EA++ 
Sbjct: 424 PDREECNRDDFPVEYKDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQEAQQK 483

Query: 490 QGNCPVFLFFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIR 539
              CPVFLFFSVNASGQF G+AEM GPVDF +N++YWQQD+W+G FP+KWHI+KDVPN  
Sbjct: 484 SSGCPVFLFFSVNASGQFIGLAEMKGPVDFNKNIEYWQQDKWTGSFPLKWHILKDVPNSL 543

[Close]

BLAST of CmoCh10G008890 vs. ExPASy Swiss-Prot
Match: Q9LJE5 (YTH domain-containing protein ECT2 OS=Arabidopsis thaliana OX=3702 GN=ECT2 PE=1 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.4e-72
Identity = 126/231 (54.55%), Postives = 170/231 (73.59%), Query Frame = 0


Query: 320 SDRNRGPRALKVKG-----------KGELGAASGASKNDLSTSLISPD--SYNRPNFATD 379
           ++ NRGPRA   K            K + G ++     +   + + PD   YN+ +F  D
Sbjct: 379 NELNRGPRAKGTKNQKGNLDDSLEVKEQTGESNVTEVGEADNTCVVPDREQYNKEDFPVD 438

Query: 380 YETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNCPVFLFFSVNA 439
           Y  A FF+IKS+SED+VH+SIKY VWASTP+GNKKL AAY+EA++  G CP+FLFFSVNA
Sbjct: 439 YANAMFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLAAAYQEAQQKAGGCPIFLFFSVNA 498

Query: 440 SGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHVLLENNDSKPV 499
           SGQF G+AEM GPVDF  NV+YWQQD+W+G FP+KWHI+KDVPN   +H+ LENN++KPV
Sbjct: 499 SGQFVGLAEMTGPVDFNTNVEYWQQDKWTGSFPLKWHIVKDVPNSLLKHITLENNENKPV 558

Query: 500 THSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTKQ 538
           T+SRD+QEV L+QG++++KIFK+H  +T I+DDF FY+ R++ + E+K KQ
Sbjct: 559 TNSRDTQEVKLEQGLKIVKIFKEHSSKTCILDDFSFYEVRQKTILEKKAKQ 609

[Close]

BLAST of CmoCh10G008890 vs. ExPASy Swiss-Prot
Match: F4K1Z0 (YTH domain-containing protein ECT3 OS=Arabidopsis thaliana OX=3702 GN=ECT3 PE=1 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.7e-71
Identity = 125/226 (55.31%), Postives = 166/226 (73.45%), Query Frame = 0


Query: 320 SDRNRGPRALKVKGKGELGAASGASKNDLST---------SLISPDSYNRPNFATDYETA 379
           ++ NRGPRA     +      + + K    T         SL+ P  YN+ +F   Y  A
Sbjct: 202 NEMNRGPRAKGFNSQDGSKVMAVSLKEQRVTETEKLSEDVSLLDPKDYNKIDFPETYTEA 261

Query: 380 KFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNCPVFLFFSVNASGQF 439
           KF+VIKS+SED++H+SIKY VW+STP+GNKKLDA+Y EAK+    CPVFL FSVN SGQF
Sbjct: 262 KFYVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDASYNEAKQKSDGCPVFLLFSVNTSGQF 321

Query: 440 CGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHVLLENNDSKPVTHSR 499
            G+AEM GPVDF + V+YWQQD+W G FPVKWH +KD+PN   RH+ LENN++KPVT+SR
Sbjct: 322 VGLAEMVGPVDFNKTVEYWQQDKWIGCFPVKWHFVKDIPNSSLRHITLENNENKPVTNSR 381

Query: 500 DSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTK 537
           D+QEV L+QGI+++KIFKDH  +T I+DDF+FY+ R++I++ERK+K
Sbjct: 382 DTQEVKLEQGIKVIKIFKDHASKTCILDDFEFYENRQKIIQERKSK 427

[Close]

BLAST of CmoCh10G008890 vs. ExPASy Swiss-Prot
Match: Q3MK94 (YTH domain-containing protein ECT1 OS=Arabidopsis thaliana OX=3702 GN=ECT1 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.9e-65
Identity = 119/216 (55.09%), Postives = 158/216 (73.15%), Query Frame = 0


Query: 324 RGPRALKVKGKGELGAAS-GASKNDLSTSLISPDSYNRPNFATDYETAKFFVIKSFSEDN 383
           RGPR+   K    L ++   A K D+S   +    YN  NF   +  AKFFVIKS+SED+
Sbjct: 200 RGPRSSDFKNPQVLNSSMLDAMKQDVSA--VDLQRYNGENFPESFVKAKFFVIKSYSEDD 259

Query: 384 VHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNCPVFLFFSVNASGQFCGVAEMAGPVDF 443
           VH  IKY  W+STP GNKKL+AAY EAKE    CPV+L FSVNASGQF G+AEM GPVDF
Sbjct: 260 VHNCIKYGAWSSTPTGNKKLNAAYYEAKENSQECPVYLLFSVNASGQFVGLAEMVGPVDF 319

Query: 444 EENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHVLLENNDSKPVTHSRDSQEVPLKQGIE 503
            + ++YWQQD+W G FPVKWHIIKD+PN   RH+ L NN++KPVT+SRD+QEV L+ G +
Sbjct: 320 NKTMEYWQQDKWIGCFPVKWHIIKDIPNSLLRHITLANNENKPVTNSRDTQEVNLEHGTK 379

Query: 504 MLKIFKDHDPRTSIIDDFDFYDERERILKERKTKQQ 539
           ++KIFK++  +T I+DD+ FY+ R++I++++K KQ+
Sbjct: 380 IIKIFKEYMSKTCILDDYKFYETRQKIIRDKKIKQK 413

[Close]

BLAST of CmoCh10G008890 vs. ExPASy Swiss-Prot
Match: Q0VCZ3 (YTH domain-containing family protein 2 OS=Bos taurus OX=9913 GN=YTHDF2 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.1e-52
Identity = 106/224 (47.32%), Postives = 146/224 (65.18%), Query Frame = 0


Query: 322 RNRGP----RALKVKGKGELGAASGASKND---LSTSLISPDSYNRPNFATDYETAKFFV 381
           RNRG       +   G G+  A SG++ ++   +   L S ++YN  +F  + +  + F+
Sbjct: 356 RNRGSGFGHNGVDGNGVGQTQAGSGSTPSEPHPVLEKLRSINNYNPKDFDWNLKHGRVFI 415

Query: 382 IKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNCPVFLFFSVNASGQFCGVA 441
           IKS+SED++HRSIKY +W ST HGNK+LDAAYR    M G  PV+L FSVN SG FCGVA
Sbjct: 416 IKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYR---SMNGKGPVYLLFSVNGSGHFCGVA 475

Query: 442 EMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHVLLENNDSKPVTHSRDSQE 501
           EM   VD+      W QD+W G+F V+W  +KDVPN + RH+ LENN++KPVT+SRD+QE
Sbjct: 476 EMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQE 535

Query: 502 VPLKQGIEMLKIFKDHDPRTSIIDDFDFYDER----ERILKERK 535
           VPL++  ++LKI   +   TSI DDF  Y++R    E + KER+
Sbjct: 536 VPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQ 576

[Close]

BLAST of CmoCh10G008890 vs. ExPASy TrEMBL
Match: A0A6J1H908 (uncharacterized protein LOC111461656 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461656 PE=4 SV=1)

HSP 1 Score: 1197.2 bits (3096), Expect = 0.0e+00
Identity = 596/596 (100.00%), Postives = 596/596 (100.00%), Query Frame = 0


Query: 1   MERSDEEHRIAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVVIGPSRDAIEKTMDA 60
           MERSDEEHRIAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVVIGPSRDAIEKTMDA
Sbjct: 1   MERSDEEHRIAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVVIGPSRDAIEKTMDA 60

Query: 61  GTSISSVHPLNVYASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNPSIV 120
           GTSISSVHPLNVYASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNPSIV
Sbjct: 61  GTSISSVHPLNVYASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNPSIV 120

Query: 121 FHSGYGFNPDMAYGQYSPVATPMPSVMLDGQVYPPQQVPFSPSYYTQQAAPCLPHGSSAV 180
           FHSGYGFNPDMAYGQYSPVATPMPSVMLDGQVYPPQQVPFSPSYYTQQAAPCLPHGSSAV
Sbjct: 121 FHSGYGFNPDMAYGQYSPVATPMPSVMLDGQVYPPQQVPFSPSYYTQQAAPCLPHGSSAV 180

Query: 181 PVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLSSPAAYPQPMGMLGSND 240
           PVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLSSPAAYPQPMGMLGSND
Sbjct: 181 PVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLSSPAAYPQPMGMLGSND 240

Query: 241 QNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSYQGSNFGSASISYPVVSDRSRLVLGKDR 300
           QNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSYQGSNFGSASISYPVVSDRSRLVLGKDR
Sbjct: 241 QNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSYQGSNFGSASISYPVVSDRSRLVLGKDR 300

Query: 301 GRDRDRDSISVFNDPYGIFSDRNRGPRALKVKGKGELGAASGASKNDLSTSLISPDSYNR 360
           GRDRDRDSISVFNDPYGIFSDRNRGPRALKVKGKGELGAASGASKNDLSTSLISPDSYNR
Sbjct: 301 GRDRDRDSISVFNDPYGIFSDRNRGPRALKVKGKGELGAASGASKNDLSTSLISPDSYNR 360

Query: 361 PNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNCPVFL 420
           PNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNCPVFL
Sbjct: 361 PNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNCPVFL 420

Query: 421 FFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHVLLEN 480
           FFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHVLLEN
Sbjct: 421 FFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHVLLEN 480

Query: 481 NDSKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTKQQLF 540
           NDSKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTKQQLF
Sbjct: 481 NDSKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTKQQLF 540

Query: 541 ATANSLNPLGDGSINPISDQFAQALRLDDNKKEKPEMEKGATSRIDASVSLDDSVK 597
           ATANSLNPLGDGSINPISDQFAQALRLDDNKKEKPEMEKGATSRIDASVSLDDSVK
Sbjct: 541 ATANSLNPLGDGSINPISDQFAQALRLDDNKKEKPEMEKGATSRIDASVSLDDSVK 596

[Close]

BLAST of CmoCh10G008890 vs. ExPASy TrEMBL
Match: A0A6J1JJQ2 (uncharacterized protein LOC111485070 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485070 PE=4 SV=1)

HSP 1 Score: 1174.5 bits (3037), Expect = 0.0e+00
Identity = 583/596 (97.82%), Postives = 588/596 (98.66%), Query Frame = 0


Query: 1   MERSDEEHRIAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVVIGPSRDAIEKTMDA 60
           MERSDEEHRIAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAV+IGPSRDAIEKTMDA
Sbjct: 1   MERSDEEHRIAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVIIGPSRDAIEKTMDA 60

Query: 61  GTSISSVHPLNVYASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNPSIV 120
           GTSISSVHPLNVYASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNPSIV
Sbjct: 61  GTSISSVHPLNVYASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNPSIV 120

Query: 121 FHSGYGFNPDMAYGQYSPVATPMPSVMLDGQVYPPQQVPFSPSYYTQQAAPCLPHGSSAV 180
           FHSGYGFNPDMAYGQYSPVATPMPSVMLDGQ YPPQQVPFSPSYYTQQA PCLPHGSSAV
Sbjct: 121 FHSGYGFNPDMAYGQYSPVATPMPSVMLDGQGYPPQQVPFSPSYYTQQATPCLPHGSSAV 180

Query: 181 PVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLSSPAAYPQPMGMLGSND 240
           PVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLSSPAAYPQPMGMLGSND
Sbjct: 181 PVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLSSPAAYPQPMGMLGSND 240

Query: 241 QNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSYQGSNFGSASISYPVVSDRSRLVLGKDR 300
           QNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSYQGSNFG ASISYPVVSDRSRLVLGKDR
Sbjct: 241 QNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSYQGSNFGGASISYPVVSDRSRLVLGKDR 300

Query: 301 GRDRDRDSISVFNDPYGIFSDRNRGPRALKVKGKGELGAASGASKNDLSTSLISPDSYNR 360
           GRDRDRDSISVFN+PYGIFSD NRGPRALKVKGKGEL AASGASKNDLSTSLISPDSYNR
Sbjct: 301 GRDRDRDSISVFNNPYGIFSDCNRGPRALKVKGKGELSAASGASKNDLSTSLISPDSYNR 360

Query: 361 PNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNCPVFL 420
           PNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNCPVFL
Sbjct: 361 PNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNCPVFL 420

Query: 421 FFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHVLLEN 480
           FFSVNASGQFCGVAEM GPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHVLLEN
Sbjct: 421 FFSVNASGQFCGVAEMVGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHVLLEN 480

Query: 481 NDSKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTKQQLF 540
           ND+KPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKT+QQLF
Sbjct: 481 NDNKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTRQQLF 540

Query: 541 ATANSLNPLGDGSINPISDQFAQALRLDDNKKEKPEMEKGATSRIDASVSLDDSVK 597
           ATANSLNPLGD SINPISDQFAQALRLDDNKKEKPEMEKGATSR DASVSLDD+VK
Sbjct: 541 ATANSLNPLGDSSINPISDQFAQALRLDDNKKEKPEMEKGATSRTDASVSLDDAVK 596

[Close]

BLAST of CmoCh10G008890 vs. ExPASy TrEMBL
Match: A0A1S3B8K2 (uncharacterized protein LOC103487191 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487191 PE=4 SV=1)

HSP 1 Score: 1093.6 bits (2827), Expect = 0.0e+00
Identity = 546/601 (90.85%), Postives = 573/601 (95.34%), Query Frame = 0


Query: 1   MER-SDEEHRIAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVVIGPSRDAIEK--T 60
           MER  D++ RI PIGERSLR DNLKEPQLSPKGGRIA  NPSPNA++IGPSRD +E+  +
Sbjct: 1   MERPDDDQDRIVPIGERSLRPDNLKEPQLSPKGGRIAPANPSPNAIIIGPSRDTMEQKVS 60

Query: 61  MDAGTSISSVHPLNVYASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNP 120
           MDAGTSIS+VHP+NVY SHEPN+QYGGYGGSS G+WDAYSQYVNADSFPVVSPVMYNDNP
Sbjct: 61  MDAGTSISNVHPVNVYTSHEPNIQYGGYGGSSTGAWDAYSQYVNADSFPVVSPVMYNDNP 120

Query: 121 SIVFHSGYGFNPDMAYGQYSPVATPMPSVMLDGQVYPPQQVPFSPSYYTQQAAPCLPHGS 180
           SIVFHSGYGFNPDMAYGQYSPVATPMPSVMLDGQ+Y PQQVPFSPSYY QQAAP LPHGS
Sbjct: 121 SIVFHSGYGFNPDMAYGQYSPVATPMPSVMLDGQLYSPQQVPFSPSYYPQQAAPGLPHGS 180

Query: 181 SAVPVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLSSP-AAYPQPMGML 240
           SAVPVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSL+SP AAYPQPMG+L
Sbjct: 181 SAVPVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLASPAAAYPQPMGVL 240

Query: 241 GSNDQNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSYQGSNFGSASISYPVVSDRSRLVL 300
           GSNDQNVGQVSLQQR MHGFGLVS+AFDARYPL++SYQGSNFGSASISYPVV+DRSRL L
Sbjct: 241 GSNDQNVGQVSLQQRPMHGFGLVSNAFDARYPLNSSYQGSNFGSASISYPVVNDRSRLTL 300

Query: 301 GKDRGRDRDRDSISVFNDPYGIFSDRNRGPRALKVKGKGELGAASGASKNDLSTSLISPD 360
            KDRGRDRDRDSIS+FNDP+GIFSDRNRGPRALK KGKGE  AASGASKNDLSTSLISPD
Sbjct: 301 EKDRGRDRDRDSISLFNDPHGIFSDRNRGPRALKAKGKGEQSAASGASKNDLSTSLISPD 360

Query: 361 SYNRPNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNC 420
           SYNRPNFATDYETAKFF+IKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNC
Sbjct: 361 SYNRPNFATDYETAKFFIIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNC 420

Query: 421 PVFLFFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHV 480
           PV LFFSVNASGQFCGVAEM GPVDFE+N DYWQQDRWSGQFPVKWHIIKDVPNIRFRHV
Sbjct: 421 PVLLFFSVNASGQFCGVAEMVGPVDFEKNADYWQQDRWSGQFPVKWHIIKDVPNIRFRHV 480

Query: 481 LLENNDSKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTK 540
           LLENND+KPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKT+
Sbjct: 481 LLENNDNKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTR 540

Query: 541 QQLFATANSLNPLGDGSINPISDQFAQALRLDD-NKKEKPEMEKGATSRIDASVSLDDSV 597
           QQLFATANSLN LGDGSI+PISDQFAQ+LRL+D NKKEKPEMEKGATSRIDASVSLDD V
Sbjct: 541 QQLFATANSLNSLGDGSISPISDQFAQSLRLEDNNKKEKPEMEKGATSRIDASVSLDDPV 600

[Close]

BLAST of CmoCh10G008890 vs. ExPASy TrEMBL
Match: A0A5A7V347 (YTH domain-containing family protein 3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold542G00720 PE=4 SV=1)

HSP 1 Score: 1091.6 bits (2822), Expect = 0.0e+00
Identity = 545/600 (90.83%), Postives = 572/600 (95.33%), Query Frame = 0


Query: 1   MER-SDEEHRIAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVVIGPSRDAIEK--T 60
           MER  D++ RI PIGERSLR DNLKEPQLSPKGGRIA  NPSPNA++IGPSRD +E+  +
Sbjct: 1   MERPDDDQDRIVPIGERSLRPDNLKEPQLSPKGGRIAPANPSPNAIIIGPSRDTMEQKVS 60

Query: 61  MDAGTSISSVHPLNVYASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNP 120
           MDAGTSIS+VHP+NVY SHEPN+QYGGYGGSS G+WDAYSQYVNADSFPVVSPVMYNDNP
Sbjct: 61  MDAGTSISNVHPVNVYTSHEPNIQYGGYGGSSTGAWDAYSQYVNADSFPVVSPVMYNDNP 120

Query: 121 SIVFHSGYGFNPDMAYGQYSPVATPMPSVMLDGQVYPPQQVPFSPSYYTQQAAPCLPHGS 180
           SIVFHSGYGFNPDMAYGQYSPVATPMPSVMLDGQ+Y PQQVPFSPSYY QQAAP LPHGS
Sbjct: 121 SIVFHSGYGFNPDMAYGQYSPVATPMPSVMLDGQLYSPQQVPFSPSYYPQQAAPGLPHGS 180

Query: 181 SAVPVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLSSP-AAYPQPMGML 240
           SAVPVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSL+SP AAYPQPMG+L
Sbjct: 181 SAVPVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLASPAAAYPQPMGVL 240

Query: 241 GSNDQNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSYQGSNFGSASISYPVVSDRSRLVL 300
           GSNDQNVGQVSLQQR MHGFGLVS+AFDARYPL++SYQGSNFGSASISYPVV+DRSRL L
Sbjct: 241 GSNDQNVGQVSLQQRPMHGFGLVSNAFDARYPLNSSYQGSNFGSASISYPVVNDRSRLTL 300

Query: 301 GKDRGRDRDRDSISVFNDPYGIFSDRNRGPRALKVKGKGELGAASGASKNDLSTSLISPD 360
            KDRGRDRDRDSIS+FNDP+GIFSDRNRGPRALK KGKGE  AASGASKNDLSTSLISPD
Sbjct: 301 EKDRGRDRDRDSISLFNDPHGIFSDRNRGPRALKAKGKGEQSAASGASKNDLSTSLISPD 360

Query: 361 SYNRPNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNC 420
           SYNRPNFATDYETAKFF+IKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNC
Sbjct: 361 SYNRPNFATDYETAKFFIIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNC 420

Query: 421 PVFLFFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHV 480
           PV LFFSVNASGQFCGVAEM GPVDFE+N DYWQQDRWSGQFPVKWHIIKDVPNIRFRHV
Sbjct: 421 PVLLFFSVNASGQFCGVAEMVGPVDFEKNADYWQQDRWSGQFPVKWHIIKDVPNIRFRHV 480

Query: 481 LLENNDSKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTK 540
           LLENND+KPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKT+
Sbjct: 481 LLENNDNKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTR 540

Query: 541 QQLFATANSLNPLGDGSINPISDQFAQALRLDD-NKKEKPEMEKGATSRIDASVSLDDSV 596
           QQLFATANSLN LGDGSI+PISDQFAQ+LRL+D NKKEKPEMEKGATSRIDASVSLDD V
Sbjct: 541 QQLFATANSLNSLGDGSISPISDQFAQSLRLEDNNKKEKPEMEKGATSRIDASVSLDDPV 600

[Close]

BLAST of CmoCh10G008890 vs. ExPASy TrEMBL
Match: A0A0A0M336 (YTH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G650130 PE=4 SV=1)

HSP 1 Score: 1091.6 bits (2822), Expect = 0.0e+00
Identity = 545/601 (90.68%), Postives = 572/601 (95.17%), Query Frame = 0


Query: 1   MER-SDEEHRIAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVVIGPSRDAIEK--T 60
           MER  DE+ RI PIGERSLR DNLKEPQLSPKGGRIA  NPSPNA++IGPSRD +E+  +
Sbjct: 1   MERPDDEQDRIVPIGERSLRPDNLKEPQLSPKGGRIAPANPSPNAIIIGPSRDTMEQKVS 60

Query: 61  MDAGTSISSVHPLNVYASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNP 120
           MDAGTSIS+VHP+NVY SHEPN+QYGGYGGSS G+WDAYSQYVNADSFPVVSPVMYNDNP
Sbjct: 61  MDAGTSISNVHPVNVYTSHEPNIQYGGYGGSSTGAWDAYSQYVNADSFPVVSPVMYNDNP 120

Query: 121 SIVFHSGYGFNPDMAYGQYSPVATPMPSVMLDGQVYPPQQVPFSPSYYTQQAAPCLPHGS 180
           SIVFHSGYGFNPDMAYGQYSPVATPMPSVMLDGQ+Y PQQVPFSPSYY QQAAP LPHGS
Sbjct: 121 SIVFHSGYGFNPDMAYGQYSPVATPMPSVMLDGQLYSPQQVPFSPSYYPQQAAPGLPHGS 180

Query: 181 SAVPVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLSSP-AAYPQPMGML 240
           SAVPVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSL+SP AAYPQPMG+L
Sbjct: 181 SAVPVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLASPAAAYPQPMGVL 240

Query: 241 GSNDQNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSYQGSNFGSASISYPVVSDRSRLVL 300
           GSNDQNVGQVSLQQR MHGFGLVS+AFDARYPLS+SYQGSNFGS SISYPVV+DRSRL L
Sbjct: 241 GSNDQNVGQVSLQQRPMHGFGLVSNAFDARYPLSSSYQGSNFGSGSISYPVVNDRSRLTL 300

Query: 301 GKDRGRDRDRDSISVFNDPYGIFSDRNRGPRALKVKGKGELGAASGASKNDLSTSLISPD 360
            KDRGRDRDRDSIS+FNDP+GIFSDRNRGPRALK KGKGE  AASGA+KNDLSTSLISPD
Sbjct: 301 EKDRGRDRDRDSISLFNDPHGIFSDRNRGPRALKAKGKGEQSAASGANKNDLSTSLISPD 360

Query: 361 SYNRPNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNC 420
           SYNRPNFATDYETAKFF+IKSFSEDNVHRSIKYKVWASTPHGNKKLDAA+REAKEMQGNC
Sbjct: 361 SYNRPNFATDYETAKFFIIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAFREAKEMQGNC 420

Query: 421 PVFLFFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHV 480
           PV LFFSVNASGQFCGVAEM GPVDFE+N DYWQQDRWSGQFPVKWHIIKDVPNIRFRHV
Sbjct: 421 PVLLFFSVNASGQFCGVAEMVGPVDFEKNADYWQQDRWSGQFPVKWHIIKDVPNIRFRHV 480

Query: 481 LLENNDSKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTK 540
           LLENND+KPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKT+
Sbjct: 481 LLENNDNKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTR 540

Query: 541 QQLFATANSLNPLGDGSINPISDQFAQALRLDD-NKKEKPEMEKGATSRIDASVSLDDSV 597
           QQLFATANSLN LGDGSI+PISDQFAQ+LRL+D NKKEKPEMEKGATSRIDASVSLDD V
Sbjct: 541 QQLFATANSLNSLGDGSISPISDQFAQSLRLEDNNKKEKPEMEKGATSRIDASVSLDDPV 600

[Close]

BLAST of CmoCh10G008890 vs. TAIR 10
Match: AT3G13060.2 (evolutionarily conserved C-terminal region 5 )

HSP 1 Score: 439.5 bits (1129), Expect = 4.3e-123
Identity = 272/625 (43.52%), Postives = 366/625 (58.56%), Query Frame = 0


Query: 15  ERSLRQDNLKEPQLSPKGGRIASTNPSPNA-VVIGPSRDA-IEKTMDAGTSISSVHPLNV 74
           E+    D +KE  +       AS   S  A VV+ P++ A +          +   P ++
Sbjct: 15  EQPASLDIMKEQTVPANNETSASFKSSQEAPVVVHPAKVAPLTGPYGLAGDFAGHLPSSI 74

Query: 75  YASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNPSIVFHSGYGFNPDMA 134
            +       Y GY  +  G WD YS YVN +   + SPV +N+N S+V+ +GYG+NP M 
Sbjct: 75  LSPQAQGFYYRGY-ENPTGEWDEYSSYVNVEGLDITSPVGFNENASLVYQTGYGYNPQMP 134

Query: 135 YGQYSPVATPMPSVMLDGQVYPPQQVPFSPS--YYTQQAAPCLPHGSSAVPVSPTEM--- 194
           YG YSP A+P+PS   +GQ+Y PQQ PFS +  YY Q   P + + +S      T +   
Sbjct: 135 YGPYSPAASPLPS---EGQLYSPQQFPFSGASPYYQQVVPPSMQYITSPTQPELTSLVGV 194

Query: 195 ------ISPESSTFDNMLYGPGTGFLLNFG------SFGGGNLGS----------GSLSS 254
                 I P  S   + + GP  G   N G       F GG               S  S
Sbjct: 195 DQQGDNIGPRQSYHPHPI-GPFNGNQPNLGFPEWQQGFDGGIWSDWSKPSDMHRHSSSIS 254

Query: 255 PAAYPQPMGMLGSNDQNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSY-QGSNFGSASIS 314
           PA  PQP+G  GS  QN+   S +QR  +GFG  S++++  Y  S    QGSN+GS  IS
Sbjct: 255 PALSPQPLGSYGSYGQNIPMGSQRQRSFYGFGSGSNSYNRGYMHSGGRGQGSNYGSRLIS 314

Query: 315 YPVVSDRSRLVLGKDRGRDRDRDSI--SVFNDPYGIFSDRNRGPRALKVKGK--GELGAA 374
              + ++  + +   RGR R  D      +N  + I +++NRGPRA K K +   EL +A
Sbjct: 315 NVGMGNQGWIGVDNSRGRGRVSDPSLGGAYNGTFDILNEQNRGPRASKPKTQVLEELDSA 374

Query: 375 SGASKNDLSTSLISPDSYNRPNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNK 434
           + + KN+  ++    +S N  +F TDY  AK F+IKS+SEDNVH+SIKY VWASTP+GNK
Sbjct: 375 ADSKKNNKGSAKEHEES-NNADFVTDYTNAKLFIIKSYSEDNVHKSIKYNVWASTPNGNK 434

Query: 435 KLDAAYREAKEMQGNCPVFLFFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPV 494
           KLDAAYREAK+ +  CP+FL FSVNAS QFCGVAEM GPVDFE++VDYWQQD+WSGQFPV
Sbjct: 435 KLDAAYREAKDEKEPCPLFLLFSVNASSQFCGVAEMVGPVDFEKSVDYWQQDKWSGQFPV 494

Query: 495 KWHIIKDVPNIRFRHVLLENNDSKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDF 554
           KWHIIKDVPN +FRH++LENND+KPVT+SRD+QEV L+QGIEMLKIFK++D  TSI+DDF
Sbjct: 495 KWHIIKDVPNSQFRHIILENNDNKPVTNSRDTQEVKLEQGIEMLKIFKNYDADTSILDDF 554

Query: 555 DFYDERERILKERKTKQQ-------LFATANSLNP----LGDGSINPISDQFAQALRLDD 595
            FY+ERE+I+++RK ++Q       + A  N   P    L    +  +S  FAQ +RLD+
Sbjct: 555 GFYEEREKIIQDRKARRQPSLPSAGVVAGENEHKPASAALPTDFMKNMSKSFAQVVRLDE 614

[Close]

BLAST of CmoCh10G008890 vs. TAIR 10
Match: AT5G58190.2 (evolutionarily conserved C-terminal region 10 )

HSP 1 Score: 412.9 bits (1060), Expect = 4.3e-115
Identity = 257/582 (44.16%), Postives = 348/582 (59.79%), Query Frame = 0


Query: 4   SDEEHRIAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVVIGPSRDAIEKTMDAGTS 63
           S++ +RI   GER +  DN  + Q+S   GR   ++   ++VV  P        +     
Sbjct: 9   SNQRNRIVSSGERPVMADNGVQQQVSHDDGRNIVSSSYSSSVVPSPDPAPYYNVLQT--- 68

Query: 64  ISSVHPLNVYASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPV-VSPVMYNDNPSIVF- 123
                P N+Y  ++ ++   GY      +WD Y +Y       + V PV+YNDN S+++ 
Sbjct: 69  -----PTNLY-HYDWDIANSGY-AQGINTWDGYPRYATTTPEAMHVPPVVYNDNSSLMYQ 128

Query: 124 HSGYGFNPDMAYGQYSPVATPMPSVMLDGQVYPPQQVPFSPSYYTQQAAPCLPHGS-SAV 183
           + GYGFN             P PSVML+G      Q+P SP+YY Q      P G+ SA+
Sbjct: 129 YPGYGFN-------------PYPSVMLEG------QIPVSPAYYPQ------PFGAPSAM 188

Query: 184 PVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNL----GSGSLSSPAAYPQPMGML 243
              P++ I P S+            +++ +G +GGGN     G  SL+S   YPQ MG+L
Sbjct: 189 HYLPSD-IDPTSA-----------AYMIPYGQYGGGNYSGNQGDISLTSHIPYPQTMGIL 248

Query: 244 GSNDQNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSYQGSNFGSASISYPVVSDRSRLVL 303
           G  D N  QV+L     HG G+ SS+    Y    SYQ     S++ SY  V +R RL  
Sbjct: 249 GPYDHNASQVAL-----HGSGVASSSSLGGYYHVGSYQNP---SSTPSYYGVDNRVRLTP 308

Query: 304 GKDRGRDRDRDSISVFNDPYGIFSDRNRGPRA---LKVKGKGELGAASGASKNDLSTSLI 363
              + R++D+ SIS  +D YG     NRGPRA   +K K   +  +  G S +D ST+  
Sbjct: 309 DIGKRREKDQGSISSTSDLYG-----NRGPRASSRVKSKNSSKPCSTIGDSASDSSTAGP 368

Query: 364 SPDSYNRPNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQ 423
           +P  YN P F TDY+ AKFF++KSFSEDNVHRSIKY VWASTPHGNKKLD AYR+A++M 
Sbjct: 369 NPSLYNHPEFVTDYKNAKFFIVKSFSEDNVHRSIKYNVWASTPHGNKKLDTAYRDAEKMG 428

Query: 424 GNCPVFLFFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRF 483
           G CP+FLFFSVNASGQFCGV+EM GPVDFE++  YWQQDRWSGQFPVKWHI+KD+PN RF
Sbjct: 429 GKCPIFLFFSVNASGQFCGVSEMVGPVDFEKDAGYWQQDRWSGQFPVKWHIVKDIPNNRF 488

Query: 484 RHVLLENNDSKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERE-RILKE 543
            H+LL+NND+KPVTHSRDSQEV L+QGIEML+IFK+++  TSI+DDF +YDE E + + E
Sbjct: 489 CHILLQNNDNKPVTHSRDSQEVKLRQGIEMLRIFKEYEAHTSILDDFGYYDELEGQKVGE 521

Query: 544 RKTKQQLFATANSLNPLGDGSINPISDQFAQALRLDDNKKEK 575
             T+++      S+  L +           QA++++D K+E+
Sbjct: 549 DGTRKKAGEEETSVEQLSER---------LQAVKVEDGKEEE 521

[Close]

BLAST of CmoCh10G008890 vs. TAIR 10
Match: AT5G58190.1 (evolutionarily conserved C-terminal region 10 )

HSP 1 Score: 408.7 bits (1049), Expect = 8.1e-114
Identity = 257/582 (44.16%), Postives = 348/582 (59.79%), Query Frame = 0


Query: 4   SDEEHRIAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVVIGPSRDAIEKTMDAGTS 63
           S++ +RI   GER +  DN  + Q+S   GR   ++   ++VV  P        +     
Sbjct: 9   SNQRNRIVSSGERPVMADNGVQ-QVSHDDGRNIVSSSYSSSVVPSPDPAPYYNVLQT--- 68

Query: 64  ISSVHPLNVYASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPV-VSPVMYNDNPSIVF- 123
                P N+Y  ++ ++   GY      +WD Y +Y       + V PV+YNDN S+++ 
Sbjct: 69  -----PTNLY-HYDWDIANSGY-AQGINTWDGYPRYATTTPEAMHVPPVVYNDNSSLMYQ 128

Query: 124 HSGYGFNPDMAYGQYSPVATPMPSVMLDGQVYPPQQVPFSPSYYTQQAAPCLPHGS-SAV 183
           + GYGFN             P PSVML+G      Q+P SP+YY Q      P G+ SA+
Sbjct: 129 YPGYGFN-------------PYPSVMLEG------QIPVSPAYYPQ------PFGAPSAM 188

Query: 184 PVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNL----GSGSLSSPAAYPQPMGML 243
              P++ I P S+            +++ +G +GGGN     G  SL+S   YPQ MG+L
Sbjct: 189 HYLPSD-IDPTSA-----------AYMIPYGQYGGGNYSGNQGDISLTSHIPYPQTMGIL 248

Query: 244 GSNDQNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSYQGSNFGSASISYPVVSDRSRLVL 303
           G  D N  QV+L     HG G+ SS+    Y    SYQ     S++ SY  V +R RL  
Sbjct: 249 GPYDHNASQVAL-----HGSGVASSSSLGGYYHVGSYQNP---SSTPSYYGVDNRVRLTP 308

Query: 304 GKDRGRDRDRDSISVFNDPYGIFSDRNRGPRA---LKVKGKGELGAASGASKNDLSTSLI 363
              + R++D+ SIS  +D YG     NRGPRA   +K K   +  +  G S +D ST+  
Sbjct: 309 DIGKRREKDQGSISSTSDLYG-----NRGPRASSRVKSKNSSKPCSTIGDSASDSSTAGP 368

Query: 364 SPDSYNRPNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQ 423
           +P  YN P F TDY+ AKFF++KSFSEDNVHRSIKY VWASTPHGNKKLD AYR+A++M 
Sbjct: 369 NPSLYNHPEFVTDYKNAKFFIVKSFSEDNVHRSIKYNVWASTPHGNKKLDTAYRDAEKMG 428

Query: 424 GNCPVFLFFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRF 483
           G CP+FLFFSVNASGQFCGV+EM GPVDFE++  YWQQDRWSGQFPVKWHI+KD+PN RF
Sbjct: 429 GKCPIFLFFSVNASGQFCGVSEMVGPVDFEKDAGYWQQDRWSGQFPVKWHIVKDIPNNRF 488

Query: 484 RHVLLENNDSKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERE-RILKE 543
            H+LL+NND+KPVTHSRDSQEV L+QGIEML+IFK+++  TSI+DDF +YDE E + + E
Sbjct: 489 CHILLQNNDNKPVTHSRDSQEVKLRQGIEMLRIFKEYEAHTSILDDFGYYDELEGQKVGE 520

Query: 544 RKTKQQLFATANSLNPLGDGSINPISDQFAQALRLDDNKKEK 575
             T+++      S+  L +           QA++++D K+E+
Sbjct: 549 DGTRKKAGEEETSVEQLSER---------LQAVKVEDGKEEE 520

[Close]

BLAST of CmoCh10G008890 vs. TAIR 10
Match: AT3G13060.1 (evolutionarily conserved C-terminal region 5 )

HSP 1 Score: 374.4 bits (960), Expect = 1.7e-103
Identity = 228/515 (44.27%), Postives = 303/515 (58.83%), Query Frame = 0


Query: 15  ERSLRQDNLKEPQLSPKGGRIASTNPSPNA-VVIGPSRDA-IEKTMDAGTSISSVHPLNV 74
           E+    D +KE  +       AS   S  A VV+ P++ A +          +   P ++
Sbjct: 15  EQPASLDIMKEQTVPANNETSASFKSSQEAPVVVHPAKVAPLTGPYGLAGDFAGHLPSSI 74

Query: 75  YASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNPSIVFHSGYGFNPDMA 134
            +       Y GY  +  G WD YS YVN +   + SPV +N+N S+V+ +GYG+NP M 
Sbjct: 75  LSPQAQGFYYRGY-ENPTGEWDEYSSYVNVEGLDITSPVGFNENASLVYQTGYGYNPQMP 134

Query: 135 YGQYSPVATPMPSVMLDGQVYPPQQVPFSPS--YYTQQAAPCLPHGSSAVPVSPTEM--- 194
           YG YSP A+P+PS   +GQ+Y PQQ PFS +  YY Q   P + + +S      T +   
Sbjct: 135 YGPYSPAASPLPS---EGQLYSPQQFPFSGASPYYQQVVPPSMQYITSPTQPELTSLVGV 194

Query: 195 ------ISPESSTFDNMLYGPGTGFLLNFG------SFGGGNLGS----------GSLSS 254
                 I P  S   + + GP  G   N G       F GG               S  S
Sbjct: 195 DQQGDNIGPRQSYHPHPI-GPFNGNQPNLGFPEWQQGFDGGIWSDWSKPSDMHRHSSSIS 254

Query: 255 PAAYPQPMGMLGSNDQNVGQVSLQQRHMHGFGLVSSAFDARYPLSNSY-QGSNFGSASIS 314
           PA  PQP+G  GS  QN+   S +QR  +GFG  S++++  Y  S    QGSN+GS  IS
Sbjct: 255 PALSPQPLGSYGSYGQNIPMGSQRQRSFYGFGSGSNSYNRGYMHSGGRGQGSNYGSRLIS 314

Query: 315 YPVVSDRSRLVLGKDRGRDRDRDSI--SVFNDPYGIFSDRNRGPRALKVKGK--GELGAA 374
              + ++  + +   RGR R  D      +N  + I +++NRGPRA K K +   EL +A
Sbjct: 315 NVGMGNQGWIGVDNSRGRGRVSDPSLGGAYNGTFDILNEQNRGPRASKPKTQVLEELDSA 374

Query: 375 SGASKNDLSTSLISPDSYNRPNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNK 434
           + + KN+  ++    +S N  +F TDY  AK F+IKS+SEDNVH+SIKY VWASTP+GNK
Sbjct: 375 ADSKKNNKGSAKEHEES-NNADFVTDYTNAKLFIIKSYSEDNVHKSIKYNVWASTPNGNK 434

Query: 435 KLDAAYREAKEMQGNCPVFLFFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPV 494
           KLDAAYREAK+ +  CP+FL FSVNAS QFCGVAEM GPVDFE++VDYWQQD+WSGQFPV
Sbjct: 435 KLDAAYREAKDEKEPCPLFLLFSVNASSQFCGVAEMVGPVDFEKSVDYWQQDKWSGQFPV 494

Query: 495 KWHIIKDVPNIRFRHVLLENNDSKPVTHSRDSQEV 496
           KWHIIKDVPN +FRH++LENND+KPVT+SRD+QEV
Sbjct: 495 KWHIIKDVPNSQFRHIILENNDNKPVTNSRDTQEV 523

[Close]

BLAST of CmoCh10G008890 vs. TAIR 10
Match: AT1G55500.2 (evolutionarily conserved C-terminal region 4 )

HSP 1 Score: 290.0 bits (741), Expect = 4.2e-78
Identity = 219/606 (36.14%), Postives = 313/606 (51.65%), Query Frame = 0


Query: 10  IAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVVIG-PSRDAIEKTMDAGTSISSVH 69
           +AP  +++   D LK+  L  K   +    P+    V    + D+  +      S+S + 
Sbjct: 4   VAPPADQA--ADVLKKLSLDSKSRTLEIPEPTKKTGVYQYGAMDSNGQVPSFDRSLSPML 63

Query: 70  P---LNVYASHEPNV----QYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNPSIVF 129
           P   L+    + PNV     Y GYG         Y+ Y N++S  + S   Y +N S+V+
Sbjct: 64  PSDALDPSVFYVPNVYQQPYYYGYGSD-------YTGYTNSESVDMTSGA-YGENASLVY 123

Query: 130 HSGYGFNPDMAYGQYSPVATPMPSVMLDGQVYPPQQVPFSPSYYTQQAAPCLPHGSSAVP 189
             GYG+    A   YSP  +P P +  DGQ+Y  QQ  + P   T  + P     +S+VP
Sbjct: 124 PQGYGY----AAFPYSPATSPAPQLGGDGQLYGAQQYQY-PFPLTASSGPF----ASSVP 183

Query: 190 VSPTEMISPE------SSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLSSPAAYPQPMGM 249
            S    +S        S+     + G      LN  +  G +   G L+  A Y  P   
Sbjct: 184 ASTQSKLSTNKAANSASAGIPKGMNGSAPVKPLNQSALYGNSALGGGLA--AGYQDPRYS 243

Query: 250 L-----------GSNDQNVGQVSLQQRHMHGFGLVSSAFDARYPL---------SNSYQG 309
                       GSN  +V      QR + G G+ SS   A   +         SNS+  
Sbjct: 244 YDGFYTPVSWHDGSNFSDV------QRSVSGSGVASSYSKANNNVPATRNQNSSSNSHYT 303

Query: 310 SNFGSASIS-------YPVVSD-----------RSRLVLG--------KDRG-------- 369
           S +  AS++       Y  VS            RS +  G         +RG        
Sbjct: 304 SMYQPASMTGYAAQGYYDRVSPNKSYGQYGSTVRSGMGYGSSGYGSRTNERGWLNTDNKY 363

Query: 370 RDRDR-DSISVFNDPYGIFSDRNRGPRALKVKGKGELGAAS------GASKNDLSTSLIS 429
           R R R +S    N+     ++ NRGPRA   K   E+ +          S  + + + + 
Sbjct: 364 RSRGRGNSYFYGNENIDGLNELNRGPRAKGTKATEEVSSEEVKKQTFDESNTEETVTCVL 423

Query: 430 PD--SYNRPNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEM 489
           PD    NR +F  +Y+ AKFF+IKS+SED+VH+SIKY VWASTP+GNKKLDAAY+EA++ 
Sbjct: 424 PDREECNRDDFPVEYKDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQEAQQK 483

Query: 490 QGNCPVFLFFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIR 539
              CPVFLFFSVNASGQF G+AEM GPVDF +N++YWQQD+W+G FP+KWHI+KDVPN  
Sbjct: 484 SSGCPVFLFFSVNASGQFIGLAEMKGPVDFNKNIEYWQQDKWTGSFPLKWHILKDVPNSL 543

The following BLAST results are available for this feature:

BLAST of CmoCh10G008890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A1P8AS03	5.9e-77	36.14	YTH domain-containing protein ECT4 OS=Arabidopsis thaliana OX=3702 GN=ECT4 PE=2 ...	[more]
Q9LJE5	4.4e-72	54.55	YTH domain-containing protein ECT2 OS=Arabidopsis thaliana OX=3702 GN=ECT2 PE=1 ...	[more]
F4K1Z0	3.7e-71	55.31	YTH domain-containing protein ECT3 OS=Arabidopsis thaliana OX=3702 GN=ECT3 PE=1 ...	[more]
Q3MK94	8.9e-65	55.09	YTH domain-containing protein ECT1 OS=Arabidopsis thaliana OX=3702 GN=ECT1 PE=1 ...	[more]
Q0VCZ3	5.1e-52	47.32	YTH domain-containing family protein 2 OS=Bos taurus OX=9913 GN=YTHDF2 PE=2 SV=1	[more]

BLAST of CmoCh10G008890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H908	0.0e+00	100.00	uncharacterized protein LOC111461656 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JJQ2	0.0e+00	97.82	uncharacterized protein LOC111485070 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3B8K2	0.0e+00	90.85	uncharacterized protein LOC103487191 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7V347	0.0e+00	90.83	YTH domain-containing family protein 3-like isoform X1 OS=Cucumis melo var. maku...	[more]
A0A0A0M336	0.0e+00	90.68	YTH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G650130 PE=4 SV...	[more]

BLAST of CmoCh10G008890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13060.2	4.3e-123	43.52	evolutionarily conserved C-terminal region 5	[more]
AT5G58190.2	4.3e-115	44.16	evolutionarily conserved C-terminal region 10	[more]
AT5G58190.1	8.1e-114	44.16	evolutionarily conserved C-terminal region 10	[more]
AT3G13060.1	1.7e-103	44.27	evolutionarily conserved C-terminal region 5	[more]
AT1G55500.2	4.2e-78	36.14	evolutionarily conserved C-terminal region 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007275	YTH domain	PFAM	PF04146	YTH	coord: 370..508 e-value: 1.6E-38 score: 132.7
IPR007275	YTH domain	PROSITE	PS50882	YTH	coord: 370..507 score: 51.727303
None	No IPR available	GENE3D	3.10.590.10	ph1033 like domains	coord: 351..522 e-value: 3.9E-66 score: 223.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 567..581
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 567..596
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR12357	YTH YT521-B HOMOLOGY DOMAIN-CONTAINING	coord: 14..574
None	No IPR available	PANTHER	PTHR12357:SF77	EVOLUTIONARILY CONSERVED C-TERMINAL REGION 10	coord: 14..574

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G008890.1	CmoCh10G008890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061157	mRNA destabilization
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003723	RNA binding