CmoCh10G008510 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G008510
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Ribosomal RNA small subunit methyltransferase A
Location	Cmo_Chr10: 4026529 .. 4030163 (+)
RNA-Seq Expression	CmoCh10G008510
Synteny	CmoCh10G008510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTGTGGTCCTCATCATCGTCTCCGAAAGGGATTGTCGTGACATTTCCGGTGCTCTTACTCAGTGCCTTCGCTGTGATTCTCTTTTGCTTCTTCTTTATCTCCAATTTCTCCTCTTGTCCATGCCCTGTTTCTCCCCACATTGTTGTCTCCAGTATTGCTGCCGACGCCGGAGCCCAGATTCGTGATGGGGTTCTGACAAACAAAGAAGATGTTGATTGGGTGAAGGATCAGATCAAAGCTAATGGGTTGCAGATGCATGATAATGTGCTCCGAAAAGGCATCAACCCTCGCACTAGGGCTCAACAACTTGAAGATCTCAGACAGTGAGTAATATAACTAATGGCTCTTCCTCTCTTCTTAGTCAAACGAGATTAGATGAACTGAAAAACAAACTTAGTCTTGCACTTTGCACTAATTTGTGGTTGTTTATTGTCATTTGTGTTGAATATCTAGAATTGAGCCTCGATTCTTGATAAGAATTGTTCTTGGGCCATCCTAAGATTATTATAGATAGTTGCTTACCTGCGTTCCTCTGCGTTGTTAAGAATTGTTCTTGGGCCATCCTAAGATTGTTATCGAATCGATAAGAGCTAGAATTTTACTTCACATCATTTTGAAATATGAACAAAAAATGGATAGTTTCCATGATAATATATCAACTTCCTTGTATGCGCTGCATAGAAATCCTTCAAAGCTTTGTTGATTGATGTTTATGGATTTATTGGTCAAATTATTTCTTCTTTGATCTATTATAACTTTGGTATCTTTGTTTTTACTTGTTCATTGTTCGTACCATTATGGAATATGAATGGAAAGTCTGAACAATTTTTATGATAGTAATTCAAACTTGCTTGAATGTTCTGCCTAGAATGTCTATAATCCTTGAATAATTTCTTATGATTTACGTCGGCCAATTTACTTATTCGTTGATCTATTGCAACTTTGGTACATTTGCATCGCTGTGTGTTCATTGTTCAAGTAACATTGTTCCTCTTTGTATGTGTAATATGAATACTTTATCCATTATTGATGTAATTTGTAAAATTCATGATAGGTTCAAGGGTATATCACATTATGAGGGATCCGACGAACAGAACCGAACAGCACTGCCATGCCCTGGTGAGCTCCTGGTAGAAGAACACCATAGTAACTATGGTGAACCTTGGGCAGGCGGGCGAGATGTGTTTGAGTACCTAGCTGAGTTCTCTCATATAACGCCGGATGCACACGTTTTGGAGATTGGGTGTGGCACTCTACGAGTTGGCTTGCATTTCATACGATACCTTAAGCGTGGACATTACCATTGTCTTGAGAGGGATGAGCTCTCTATGATGGCTGCCTTTAGGTATGAGCTTCCATCTCAAGGTCTCTTAAGCAAGCGCCCATTAATTGTGAAAGGAGAGGACATGGACTTCAATAAGTTTGGCTCTGAAGTTCTTTATGATTTGATATATGCTAGTGCTGTGTTCCTTCATATGCCTGATAAGCTTGTCTGGGTTGGACTAGAGAGGCTTGCTAACAAATTAAAGCCATACGATGGACGAATCTTTGTGTCCCATAACATAAAGTTCTGTTCACGGTTGGGCGGGGAGGAATGTACAAAGCGTCTAATGAACTTAGGACTTGAGTATCTAGGAAAGCGCACACACGATAGTTTGCTTTTCAATCACTACGAGATCTGGTTCGAGTTCAGACGATCGAAGCCTTAGTAGTAGTAGTAGTAGTACTAGCATTCTCTTTGTATTGTCCGGACCGAGTTCCCAATATGTGAAAGATGAATATAGGAAGCTAAGCTATCAACCGTTCATATAGTTCGTATTGCTTGCTAGTCTTGGTGGATGAGAATGCCATTGACACTTTCAGCTCCTTGACTGGTTTTATGGAGAATCCAGGAGAAATTGGCCAACCCTTGAGCATGTTTGAGTAGCAACACATTTCATTTCATTGATCACTAGAAAGAAGAAAATGGCTTTTCCTTTGTATGGTGATTAGCTTGAAAAAGGAAAAGAGTGCCTTCTCTCTTCTCCTGTGTGCCTTTTTGTTGTATGTACTCTTTGTAATCTCTATTCAATAGCTTGGAGCTTCTTTTTTTGATCTACAAGCTTTAATCATGTCCAGTTCATTATTTTCATCTTCCAAACCATTTCATAAACCAATTGCTTACTCAGATTATACACGGTGTTTAGTTCTTGAACAGTTAGGGTTGTGTGTTTAGGTCTTTGAACAACAATGGTTAATGAATTTTTGAACTCTTACTTTTGTGTCTAAATGTTTAATAGGACTCTAAATTCTTAAGCTCGGGTCGATTAATGATGTTCTATCTAAAATCTTTTTCTGTATTTGTTTTATGACAAACGTTTATATCCGGATCTTTTGATAGTGTTATAACTTGTATGCAAATCTATTGATATTGTGTTATAACTTGTATGCAAATCTAATAAAACGGAACAAAATTGAAAAACATAATTACAAATGAATTGGAAGTAATCAACCTCCCCTTCCATCAAGTGTTGGAGCTTCATCTCTTTGGCTTAGAGGTGGGCAATAGTTGTTTGATTTTGTAGGTCATGAAGTCATTGTTGGCAAAAATATATCATTTTGTCTAGACTCGCTTAAAATTCATTAAGGCAACAATGACATTGGTTGGAGAGAAGAACGAAACCTTTTTTTATAAAGGTGTGGAAACCTCTTCGTAGCAGATGCGTTTTAAAAATCATGGGTTTATGCTATTACAAATGGTATTAAAGTCAAACACCGAGCAATGTGTCAGCGAGGAGGTAGAACCCTGAAGGGGGGGTGGACACGAGACAATGTGTCAAAAAGGACATTAGAGAGGGTGGATTAGGGGGTCTCACATCGACTAGAGAAAGGAACGAGTGTCTGCAAGGAGGCTAGGCCCAAAGGGAGATTGTGAAAGCCCACCTTGGTTGGTGAGAAATTTCGTTTTAACAAACGCGTTTTAAAAACCTTGAAGAAAAGTCGAAAGAGAAAGCCGAAAGAAGAGTCTACTAGCGATAGACTTGAACTATTATACAGAGGGAATATTATCCCAGTGCATTCATCCTTCGCTTTATATTTATATGACTGATTGTGAGTGAACTCTATTAAACCATCTAATGGTATGCTTTCCTCTTGCACCTTTAATATTTGTACACTCCAATTAAATGAACTGCTAGAAATCCTAGAAACCTTGATAAAGTCTTCATAGTCATGAGCTTGGGGTTAAGAGATAGCCTTCTTTAAGGTGAAGCATCCGTGGGCAGGGACCAAGAATCCACCAAGGCTTGGATAGGAAGCAATATGATCAAACTTTCCTACATTGCTATCAGCTTGCTAATCTCATTACAAATAAGACGAACCCATGAAGAAAAACTGCCAAAAAAGAACTAAATTGAAGTGAAAGGACGCACAAGGCGACGTCTCGTCGCAAACCCAGTTCATCACGTAACCGCGGCAAGTCTACGAAGGCCAATAACTCTGTGGGTTCCCTTCAATCTTCAAAGTTTCTTCACATTCCCATCTCTTTTCTTCATCTTCCCAGATCTTCTTCTGGGAAACCACTGCAGCATTTCGAGTTCATTCTAAAGCACAATTCGTTATACCATCCTTTGCTTGAGTTGCAAGATTAA

mRNA sequence

ATGGCGCTGTGGTCCTCATCATCGTCTCCGAAAGGGATTGTCGTGACATTTCCGGTGCTCTTACTCAGTGCCTTCGCTGTGATTCTCTTTTGCTTCTTCTTTATCTCCAATTTCTCCTCTTGTCCATGCCCTGTTTCTCCCCACATTGTTGTCTCCAGTATTGCTGCCGACGCCGGAGCCCAGATTCGTGATGGGGTTCTGACAAACAAAGAAGATGTTGATTGGGTGAAGGATCAGATCAAAGCTAATGGGTTGCAGATGCATGATAATGTGCTCCGAAAAGGCATCAACCCTCGCACTAGGGCTCAACAACTTGAAGATCTCAGACAGTTCAAGGGTATATCACATTATGAGGGATCCGACGAACAGAACCGAACAGCACTGCCATGCCCTGGTGAGCTCCTGGTAGAAGAACACCATAGTAACTATGGTGAACCTTGGGCAGGCGGGCGAGATGTGTTTGAGTACCTAGCTGAGTTCTCTCATATAACGCCGGATGCACACGTTTTGGAGATTGGGTGTGGCACTCTACGAGTTGGCTTGCATTTCATACGATACCTTAAGCGTGGACATTACCATTGTCTTGAGAGGGATGAGCTCTCTATGATGGCTGCCTTTAGGTATGAGCTTCCATCTCAAGGTCTCTTAAGCAAGCGCCCATTAATTGTGAAAGGAGAGGACATGGACTTCAATAAGTTTGGCTCTGAAGTTCTTTATGATTTGATATATGCTAGTGCTGTGTTCCTTCATATGCCTGATAAGCTTGTCTGGGTTGGACTAGAGAGGCTTGCTAACAAATTAAAGCCATACGATGGACGAATCTTTGTGTCCCATAACATAAAGTTCTGTTCACGGTTGGGCGGGGAGGAATGTACAAAGCGTCTAATGAACTTAGGACTTGAGTATCTAGGAAAGCGCACACACGATATCTTGGTGGATGAGAATGCCATTGACACTTTCAGCTCCTTGACTGGTTTTATGGAGAATCCAGGAGAAATTGGCCAACCCTTGAGCATGACGCACAAGGCGACGTCTCGTCGCAAACCCAGTTCATCACGTAACCGCGGCAAGTCTACGAAGGCCAATAACTCTGTGGGTTCCCTTCAATCTTCAAAGTTTCTTCACATTCCCATCTCTTTTCTTCATCTTCCCAGATCTTCTTCTGGGAAACCACTGCAGCATTTCGAGTTCATTCTAAAGCACAATTCGTTATACCATCCTTTGCTTGAGTTGCAAGATTAA

Coding sequence (CDS)

ATGGCGCTGTGGTCCTCATCATCGTCTCCGAAAGGGATTGTCGTGACATTTCCGGTGCTCTTACTCAGTGCCTTCGCTGTGATTCTCTTTTGCTTCTTCTTTATCTCCAATTTCTCCTCTTGTCCATGCCCTGTTTCTCCCCACATTGTTGTCTCCAGTATTGCTGCCGACGCCGGAGCCCAGATTCGTGATGGGGTTCTGACAAACAAAGAAGATGTTGATTGGGTGAAGGATCAGATCAAAGCTAATGGGTTGCAGATGCATGATAATGTGCTCCGAAAAGGCATCAACCCTCGCACTAGGGCTCAACAACTTGAAGATCTCAGACAGTTCAAGGGTATATCACATTATGAGGGATCCGACGAACAGAACCGAACAGCACTGCCATGCCCTGGTGAGCTCCTGGTAGAAGAACACCATAGTAACTATGGTGAACCTTGGGCAGGCGGGCGAGATGTGTTTGAGTACCTAGCTGAGTTCTCTCATATAACGCCGGATGCACACGTTTTGGAGATTGGGTGTGGCACTCTACGAGTTGGCTTGCATTTCATACGATACCTTAAGCGTGGACATTACCATTGTCTTGAGAGGGATGAGCTCTCTATGATGGCTGCCTTTAGGTATGAGCTTCCATCTCAAGGTCTCTTAAGCAAGCGCCCATTAATTGTGAAAGGAGAGGACATGGACTTCAATAAGTTTGGCTCTGAAGTTCTTTATGATTTGATATATGCTAGTGCTGTGTTCCTTCATATGCCTGATAAGCTTGTCTGGGTTGGACTAGAGAGGCTTGCTAACAAATTAAAGCCATACGATGGACGAATCTTTGTGTCCCATAACATAAAGTTCTGTTCACGGTTGGGCGGGGAGGAATGTACAAAGCGTCTAATGAACTTAGGACTTGAGTATCTAGGAAAGCGCACACACGATATCTTGGTGGATGAGAATGCCATTGACACTTTCAGCTCCTTGACTGGTTTTATGGAGAATCCAGGAGAAATTGGCCAACCCTTGAGCATGACGCACAAGGCGACGTCTCGTCGCAAACCCAGTTCATCACGTAACCGCGGCAAGTCTACGAAGGCCAATAACTCTGTGGGTTCCCTTCAATCTTCAAAGTTTCTTCACATTCCCATCTCTTTTCTTCATCTTCCCAGATCTTCTTCTGGGAAACCACTGCAGCATTTCGAGTTCATTCTAAAGCACAATTCGTTATACCATCCTTTGCTTGAGTTGCAAGATTAA

Protein sequence

MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVGLHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGLEYLGKRTHDILVDENAIDTFSSLTGFMENPGEIGQPLSMTHKATSRRKPSSSRNRGKSTKANNSVGSLQSSKFLHIPISFLHLPRSSSGKPLQHFEFILKHNSLYHPLLELQD

Homology

[Close]

BLAST of CmoCh10G008510 vs. ExPASy TrEMBL
Match: A0A6J1H9D1 (uncharacterized protein LOC111461742 OS=Cucurbita moschata OX=3662 GN=LOC111461742 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 1.0e-179
Identity = 310/312 (99.36%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGA 60
           MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGA
Sbjct: 1   MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGA 60

Query: 61  QIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGISHYEGS 120
           QIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGISHYEGS
Sbjct: 61  QIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGISHYEGS 120

Query: 121 DEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVG 180
           DEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVG
Sbjct: 121 DEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVG 180

Query: 181 LHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYD 240
           LHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYD
Sbjct: 181 LHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYD 240

Query: 241 LIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL 300
           LIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL
Sbjct: 241 LIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL 300

Query: 301 EYLGKRTHDILV 313
           EYLGKRTHD L+
Sbjct: 301 EYLGKRTHDSLL 312

[Close]

BLAST of CmoCh10G008510 vs. ExPASy TrEMBL
Match: A0A6J1JFW2 (uncharacterized protein LOC111484758 OS=Cucurbita maxima OX=3661 GN=LOC111484758 PE=4 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.6e-177
Identity = 309/316 (97.78%), Postives = 311/316 (98.42%), Query Frame = 0


Query: 1   MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAAD--- 60
           MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAAD   
Sbjct: 1   MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAVA 60

Query: 61  -AGAQIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGISH 120
            AGAQIRDGVLTN+EDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGISH
Sbjct: 61  GAGAQIRDGVLTNEEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGISH 120

Query: 121 YEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGT 180
           YEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGT
Sbjct: 121 YEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGT 180

Query: 181 LRVGLHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSE 240
           LRVGLHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSE
Sbjct: 181 LRVGLHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSE 240

Query: 241 VLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLM 300
           VLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLM
Sbjct: 241 VLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLM 300

Query: 301 NLGLEYLGKRTHDILV 313
           NLGLEYLGKRTHD L+
Sbjct: 301 NLGLEYLGKRTHDSLL 316

[Close]

BLAST of CmoCh10G008510 vs. ExPASy TrEMBL
Match: A0A0A0M070 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G660190 PE=4 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 4.9e-166
Identity = 284/312 (91.03%), Postives = 299/312 (95.83%), Query Frame = 0


Query: 1   MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGA 60
           MALWSSS+SPKGIV+TFPVLLL+ FAVILFCFFFISN SSC CPV+P IVVS  AA  GA
Sbjct: 1   MALWSSSTSPKGIVITFPVLLLTGFAVILFCFFFISNLSSCSCPVTPRIVVSGTAASNGA 60

Query: 61  QIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGISHYEGS 120
            I DGVLTNK+DVDW+KDQIKANGLQMH+NVLRKGINPRTRAQQLEDLRQFKGISHYEG 
Sbjct: 61  HIGDGVLTNKDDVDWLKDQIKANGLQMHENVLRKGINPRTRAQQLEDLRQFKGISHYEGP 120

Query: 121 DEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVG 180
           ++QNRTALPCPGELLVEEHHSNYGEPWAGGRDVFE+LAEFSHITP+AHVLEIGCGTLRVG
Sbjct: 121 EDQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHITPNAHVLEIGCGTLRVG 180

Query: 181 LHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYD 240
           LHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDM+FNKFGSEVLYD
Sbjct: 181 LHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMNFNKFGSEVLYD 240

Query: 241 LIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL 300
           LIYASAVFLH+PDKLVWVGLERL+NKLKPYDGRIFVSHNIKFCSRLGGEECTKRL NLGL
Sbjct: 241 LIYASAVFLHIPDKLVWVGLERLSNKLKPYDGRIFVSHNIKFCSRLGGEECTKRLTNLGL 300

Query: 301 EYLGKRTHDILV 313
           EYLGKRTHD L+
Sbjct: 301 EYLGKRTHDSLL 312

[Close]

BLAST of CmoCh10G008510 vs. ExPASy TrEMBL
Match: A0A5D3D8G7 (Ribosomal RNA small subunit methyltransferase A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00580 PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 2.1e-164
Identity = 282/312 (90.38%), Postives = 297/312 (95.19%), Query Frame = 0


Query: 1   MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGA 60
           MALWSSSSSPKGIVVTFPVLLL+ FAVILFCFFFISN SSC CPV+P IVVS  AA+ G 
Sbjct: 1   MALWSSSSSPKGIVVTFPVLLLTGFAVILFCFFFISNLSSCSCPVTPRIVVSGTAANNGV 60

Query: 61  QIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGISHYEGS 120
            I +GVLTNK+DV+WVKDQIKANGLQMH+NVLRKGINPRTRAQQLEDLRQFKGISHYEG 
Sbjct: 61  HIGEGVLTNKDDVEWVKDQIKANGLQMHENVLRKGINPRTRAQQLEDLRQFKGISHYEGP 120

Query: 121 DEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVG 180
           ++QNRTA PCPGELLVEEHHSNYGEPWAGGRDVFE+LAEFSHITPDAHVLEIGCGTLRVG
Sbjct: 121 EDQNRTAFPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHITPDAHVLEIGCGTLRVG 180

Query: 181 LHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYD 240
           LHFIRYL+RGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDM+F+KFGSEV YD
Sbjct: 181 LHFIRYLRRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMNFSKFGSEVHYD 240

Query: 241 LIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL 300
           LIYASAVFLHMPDKLVWVGLERL+NKLKPYDGRIFVSHNIKFCSRLGGEECTKRL NLGL
Sbjct: 241 LIYASAVFLHMPDKLVWVGLERLSNKLKPYDGRIFVSHNIKFCSRLGGEECTKRLTNLGL 300

Query: 301 EYLGKRTHDILV 313
           EYLGKRTHD L+
Sbjct: 301 EYLGKRTHDSLL 312

[Close]

BLAST of CmoCh10G008510 vs. ExPASy TrEMBL
Match: A0A1S3B9G2 (uncharacterized protein LOC103487243 OS=Cucumis melo OX=3656 GN=LOC103487243 PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 2.1e-164
Identity = 282/312 (90.38%), Postives = 297/312 (95.19%), Query Frame = 0


Query: 1   MALWSSSSSPKGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCPVSPHIVVSSIAADAGA 60
           MALWSSSSSPKGIVVTFPVLLL+ FAVILFCFFFISN SSC CPV+P IVVS  AA+ G 
Sbjct: 1   MALWSSSSSPKGIVVTFPVLLLTGFAVILFCFFFISNLSSCSCPVTPRIVVSGTAANNGV 60

Query: 61  QIRDGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQFKGISHYEGS 120
            I +GVLTNK+DV+WVKDQIKANGLQMH+NVLRKGINPRTRAQQLEDLRQFKGISHYEG 
Sbjct: 61  HIGEGVLTNKDDVEWVKDQIKANGLQMHENVLRKGINPRTRAQQLEDLRQFKGISHYEGP 120

Query: 121 DEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLEIGCGTLRVG 180
           ++QNRTA PCPGELLVEEHHSNYGEPWAGGRDVFE+LAEFSHITPDAHVLEIGCGTLRVG
Sbjct: 121 EDQNRTAFPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEFSHITPDAHVLEIGCGTLRVG 180

Query: 181 LHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFNKFGSEVLYD 240
           LHFIRYL+RGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDM+F+KFGSEV YD
Sbjct: 181 LHFIRYLRRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMNFSKFGSEVHYD 240

Query: 241 LIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMNLGL 300
           LIYASAVFLHMPDKLVWVGLERL+NKLKPYDGRIFVSHNIKFCSRLGGEECTKRL NLGL
Sbjct: 241 LIYASAVFLHMPDKLVWVGLERLSNKLKPYDGRIFVSHNIKFCSRLGGEECTKRLTNLGL 300

Query: 301 EYLGKRTHDILV 313
           EYLGKRTHD L+
Sbjct: 301 EYLGKRTHDSLL 312

[Close]

BLAST of CmoCh10G008510 vs. TAIR 10
Match: AT3G05100.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 436.0 bits (1120), Expect = 3.3e-122
Identity = 213/321 (66.36%), Postives = 254/321 (79.13%), Query Frame = 0


Query: 1   MALWSSSSSP---KGIVVTFPVLLLSAFAVILFCFFFISNFSSCPCP----VSPHIVVSS 60
           MA  SSSSSP   KGI V+ PVL+L+   V    F   S+FSSC CP     SP   V +
Sbjct: 1   MAFSSSSSSPAMQKGIFVSMPVLVLTVSFVAAVFFLLSSSFSSCSCPEALSSSPTDAVEA 60

Query: 61  IAADAGAQIR--DGVLTNKEDVDWVKDQIKANGLQMHDNVLRKGINPRTRAQQLEDLRQF 120
               +G  +R  D +   ++D++WV+D I++NGL M  N LRKGINPRTR QQL DL Q+
Sbjct: 61  SVGGSGGDVRFEDRISPTQDDIEWVRDLIRSNGLHMQKNELRKGINPRTRDQQLADLIQY 120

Query: 121 KGISHYEGSDEQNRTALPCPGELLVEEHHSNYGEPWAGGRDVFEYLAEFSHITPDAHVLE 180
           KGISHYEG +  N TALPCPGELLVE+HHSNYGEPWAGGRDVFE+LAE S + P++ VLE
Sbjct: 121 KGISHYEGDEANNHTALPCPGELLVEQHHSNYGEPWAGGRDVFEFLAESSSLKPNSRVLE 180

Query: 181 IGCGTLRVGLHFIRYLKRGHYHCLERDELSMMAAFRYELPSQGLLSKRPLIVKGEDMDFN 240
           IGCGTLRVGLHFIRYL   H+HCLE+DELS+MAA RYELPSQGLL KRPLIV+G+DM+F+
Sbjct: 181 IGCGTLRVGLHFIRYLSPQHFHCLEKDELSLMAALRYELPSQGLLHKRPLIVRGDDMEFS 240

Query: 241 KFGSEVLYDLIYASAVFLHMPDKLVWVGLERLANKLKPYDGRIFVSHNIKFCSRLGGEEC 300
           KFGS+  YDLIYASAVFLHMPDKLVW GLERL ++LKPYDGRIFVSHN+KFCSRLG ++C
Sbjct: 241 KFGSDTAYDLIYASAVFLHMPDKLVWTGLERLVDRLKPYDGRIFVSHNVKFCSRLGQDKC 300

Query: 301 TKRLMNLGLEYLGKRTHDILV 313
           +++L +LGLEYLGK+THD L+
Sbjct: 301 SQKLASLGLEYLGKQTHDSLL 321

The following BLAST results are available for this feature:

BLAST of CmoCh10G008510 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh10G008510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9D1	1.0e-179	99.36	uncharacterized protein LOC111461742 OS=Cucurbita moschata OX=3662 GN=LOC1114617...	[more]
A0A6J1JFW2	1.6e-177	97.78	uncharacterized protein LOC111484758 OS=Cucurbita maxima OX=3661 GN=LOC111484758...	[more]
A0A0A0M070	4.9e-166	91.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G660190 PE=4 SV=1	[more]
A0A5D3D8G7	2.1e-164	90.38	Ribosomal RNA small subunit methyltransferase A OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3B9G2	2.1e-164	90.38	uncharacterized protein LOC103487243 OS=Cucumis melo OX=3656 GN=LOC103487243 PE=...	[more]

BLAST of CmoCh10G008510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05100.1	3.3e-122	66.36	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 151..310 e-value: 6.1E-12 score: 47.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..365
None	No IPR available	PANTHER	PTHR37886	S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN	coord: 1..312
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 169..277 e-value: 2.03667E-6 score: 44.3431
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 147..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G008510.1	CmoCh10G008510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity