CmoCh10G008180 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G008180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pectinesterase
Location	Cmo_Chr10: 3825599 .. 3829258 (+)
RNA-Seq Expression	CmoCh10G008180
Synteny	CmoCh10G008180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGTTTATAAATATCTACCACCACAGCCTCCCACCTCGAATTCATTCAAGGCCAAAAACCACCCCCACAAGGAGAGTTTCGGGAGAAATGTCTCGGCCAGCCGTTGCTTCATCTTTTCCGGCGACGGTGGCGCTCGTACTGGCGGTGGTCCAACTCATTACCATACTTATTCCTGCAGCCATTGTCGTCGAAGCTCGCACGAAGACGATTCCGGCAGAGCCATCGCAGCTCGACGAATGGATCGCACACAACATGAGAGAGTACCGTCAACGGAAGGCGAACGAGACAGGAGCCAAGACGCTGGATCCGCGACTTGCTAAGGCGGAGGATTGCGCTCGACTGATCACCGTTAAACAAGACGGACAAGGAAATTTCTCAACGATCACTCAAGCGATTGAGAGCATTCCGTCCGGAAATCGTGAGCGAGTGGTGGTGTGGATCGGCGGTGGGACTTACCGCGAGAAGATCACGATCGATTCTTCGAAGCCGTTCGTGACGCTGTACGGTCAGACAGGAAAAATGCCGGTCATATCGTACGACGGAACGGCGTCGGAATTTGGTACAGCCGAGAGCGCGACGGTGGCTGTGGAATCGGATTATTTCGTCGCCGTCAATGTTGCGTTTGTGGTGAGTTTCTCTTCTTCTTCTCCTCATTTTTGTGGGGCAAGTTTTGTAAATAGTGAAAGTTATGGGGCGCAAAAAATTTTTAGTAGCGTATTATTGCGTGACTACGAATTAATTATTTATTTATTTATATTTTTTTCCGGAAAAAATTCATGCATTTATTCGCCATCAAAATTAAGCATGAGTTTTCACGTTAAAATCTTGACATTTTCTTGCACAATTGGTTATTTCTGTTAGAAAAGTTCCCTTTTGAGATGACTATAACTTGTTGGATAAAAAATTTGTAGGTTTTTAATTACTCGGTGTAGATTTGAAAAATCCGAAAATTTGTAGTTTCATTTTAGATATCAATCCGTCGTGATTTAATTTGTAGTTTCATTTTAGATATCAATCCGTCGTGATTTAATTTGTAGTTTCATTTTAGATATCAATCCGTCGTGATTTAATTTGTAGTTTCATTTTAGATATCAATCCGTCGTGATTTGGTTGTCATGATTAGCATAGTTCAATTGCGTATCAACGACTAAGATGTCAAAAGTTTGAATCTCTTTGAATCTCGTATACTGTAATACAAAAAATGCATGATTGGTAAGAAATTTAATACTTATTATCGTGCAATTACAACCACATGGGTTGGAGGGGAGAAGGAAACACTCCTCGCAAGGGTGTGGAAACCTCTTCCTAATAGATGTGTCATTTCTTACAAAGGTGTGGAAATCTCTTTTGTGTCATATTCCTTATAACATGTGGAAACCTCTTCCTAGTAGATGCGGCATATCGGTTGGAGAGGAGAACGAAACATTTCTTACAAGAGTGTGGAAACCTCTCCCTAGTAGACACCGTTTTAAAGACCTTGAGTCCCTAGTAGACACCGTTTTAAAGACCTTGAGGGGAACTCCGACAGGGAAAGCCCAAAGAGTCATTATCTGCTAGCGGTGGGCTTGGCCGTTACAAATGGTATCGGAGCTAGACACCATGCTGTGTGCTAGCGAGGATTGTGCGCCCCCGAAGAAAATGGATTGTGAGGTTCCACATTAGTTCGATTCCACGTTAGTTCGATTCCACGTTAGTTTGATTCCTCACTAACCAACCTTTCTAGTTCAAAATTGTACAATCTCCTAACGTGTTTTGAATGAATGAAGATGAAATTGTAGTGATTAACAAGAAATGAAGATTGGGTATGATGAATTTGTTGCTGCAGAATTCAGCTCCAATGCCGGATGCAGGAAGAACAGGAGGACAAGCAGTGGCAATGAGGATATCAGGGGATAAGGCAGCATTCCACCACTGCCAATTCATAGGATTTCAGGACACTCTTTGCGATGACAGAGGCAGACATTTTTTCAAGGATTGTTACATCGAAGGCACGGTCGACTTCATCTTTGGAAATGGCAAATCCCTCTACTTGGTACCTACGCCCTTCTTATACTTTCATATCAAAATCTCCTCAAATCTTCCTACACTTACAAATTAATTAACCCAACTTTAACACAAAAAATAACCAATACTTTCTCTTACATTACATTAACACGAATTACTATCATCGATTTGGTAAATGGGTATCTACTTTTACTATCATCGATGTGGTTAGTGGGTAGCTACTTTTACTATCATCGATCTGGTTAGTGGGTAGCTACTTTTACTATCATCGATCTGGTTAGTGGGTAGCTACTTTTACTATCATCGATCCGGGTAAGTGGGTAGCTATTTTTACTATCATCCCTAGTAAGTGGGTAGCTATTTTTACTGTCATCAAGCTAGTAAGTGGGTATCTACTTTTACTGTCATCGATCTGGTAGTAAGTGGGTATCTACTTTTACTGTCATCGATCTGGTAAGTGGGTATCTACTTTTACTGTCATCGATCTGGTGGTAAGTGGGTATCTACTTTTACTGTCATCGATCTGGTAGTAAGTGGGTATCTACTTTTACTGTCATCGATCTGGTAGTAAGTGGGTATCTACTTTTACTGTCATCGATCTGGTAGTAAGTGGGTAGCTACTTTTACTGTCATCGATTTGGTAGTAAGTGGGTAGCTATTTTTACTCTCATCAAGCTAGTAAGTAGATACTATCATCGATTTGGTAAGCAGGTATTCATTTTTACCATAATCGAGCTAGTAAGTAGATACTATCATCTATTTTTACTCACGAACAAATTATTCAATGAGTCTGTTACAATGTGGTCGACAATTGTTCACCGGTTAGATGTGGTTAAAGGTACTATGCAAAAATATTCAAAATTTATATCCATTTGTTGTCATCAACCCTTTCATCCATATATGTGTGTGTGTTTGTGACAGAAAACAGTAATAAACTCAGTGGCGGAAGGGACAGGAGTGATCACAGCTCAAGCAAGGGAAAATTCCACAGACGACAGCGGCTTCACATTTGCATATTGCAACATCACTGGAACTGGAAACACCTATTTGGGAAGAGCATGGAAGGAGAGAACTCGTGTGGTTTTTGCTTACACTTACATGGGAACACTCATTAACACCCAAGGATGGTCCGATAAAATGCAGGGAACTGAACCTCGAAAGTGAGCAAAATCACGCACATAATAATATCATCATCATCATTGTCGTCGTATTATTGCTAGTTGATTGATTCATTTTGATTATCGACCGTGTTGACAGGAGTATGTACTACGGTGAGTACAAATGCAAAGGACCCGGGGCGGACAGCACAGGCCGAGCACACTACACGAGAATACTCACGGACGACGAAGCGAAGGCGTTTTTGAGTATGACTTATATCCATGGAAACAAATGGGTTCTACCACCTCCAAGGCTGTCCCTTCTCCCGGTGTCATCGCAATGCCATGGCTGATCATGTTGTCTCATGTTTCTTTTTGGATAGAGTTTTGGTTGATTCTTGTTGTTGTACCAAACCGATCAATTTCTTGAGCTTTTCAGGAAGCCTCTCCTCTCTCTCCGTTGATCTCTTCTATTAATCATTTATATGTTCTTACATTCACAAACGATGCTGCGCGCAGTTTTGCAAGTCTAGGCAAAAATATGATCATGAATGGGCC

mRNA sequence

CGCGTTTATAAATATCTACCACCACAGCCTCCCACCTCGAATTCATTCAAGGCCAAAAACCACCCCCACAAGGAGAGTTTCGGGAGAAATGTCTCGGCCAGCCGTTGCTTCATCTTTTCCGGCGACGGTGGCGCTCGTACTGGCGGTGGTCCAACTCATTACCATACTTATTCCTGCAGCCATTGTCGTCGAAGCTCGCACGAAGACGATTCCGGCAGAGCCATCGCAGCTCGACGAATGGATCGCACACAACATGAGAGAGTACCGTCAACGGAAGGCGAACGAGACAGGAGCCAAGACGCTGGATCCGCGACTTGCTAAGGCGGAGGATTGCGCTCGACTGATCACCGTTAAACAAGACGGACAAGGAAATTTCTCAACGATCACTCAAGCGATTGAGAGCATTCCGTCCGGAAATCGTGAGCGAGTGGTGGTGTGGATCGGCGGTGGGACTTACCGCGAGAAGATCACGATCGATTCTTCGAAGCCGTTCGTGACGCTGTACGGTCAGACAGGAAAAATGCCGGTCATATCGTACGACGGAACGGCGTCGGAATTTGGTACAGCCGAGAGCGCGACGGTGGCTGTGGAATCGGATTATTTCGTCGCCGTCAATGTTGCGTTTGTGAATTCAGCTCCAATGCCGGATGCAGGAAGAACAGGAGGACAAGCAGTGGCAATGAGGATATCAGGGGATAAGGCAGCATTCCACCACTGCCAATTCATAGGATTTCAGGACACTCTTTGCGATGACAGAGGCAGACATTTTTTCAAGGATTGTTACATCGAAGGCACGGTCGACTTCATCTTTGGAAATGGCAAATCCCTCTACTTGAAAACAGTAATAAACTCAGTGGCGGAAGGGACAGGAGTGATCACAGCTCAAGCAAGGGAAAATTCCACAGACGACAGCGGCTTCACATTTGCATATTGCAACATCACTGGAACTGGAAACACCTATTTGGGAAGAGCATGGAAGGAGAGAACTCGTGTGGTTTTTGCTTACACTTACATGGGAACACTCATTAACACCCAAGGATGGTCCGATAAAATGCAGGGAACTGAACCTCGAAAGAGTATGTACTACGGTGAGTACAAATGCAAAGGACCCGGGGCGGACAGCACAGGCCGAGCACACTACACGAGAATACTCACGGACGACGAAGCGAAGGCGTTTTTGAGTATGACTTATATCCATGGAAACAAATGGGTTCTACCACCTCCAAGGCTGTCCCTTCTCCCGGTGTCATCGCAATGCCATGGCTGATCATGTTGTCTCATGTTTCTTTTTGGATAGAGTTTTGGTTGATTCTTGTTGTTGTACCAAACCGATCAATTTCTTGAGCTTTTCAGGAAGCCTCTCCTCTCTCTCCGTTGATCTCTTCTATTAATCATTTATATGTTCTTACATTCACAAACGATGCTGCGCGCAGTTTTGCAAGTCTAGGCAAAAATATGATCATGAATGGGCC

Coding sequence (CDS)

ATGTCTCGGCCAGCCGTTGCTTCATCTTTTCCGGCGACGGTGGCGCTCGTACTGGCGGTGGTCCAACTCATTACCATACTTATTCCTGCAGCCATTGTCGTCGAAGCTCGCACGAAGACGATTCCGGCAGAGCCATCGCAGCTCGACGAATGGATCGCACACAACATGAGAGAGTACCGTCAACGGAAGGCGAACGAGACAGGAGCCAAGACGCTGGATCCGCGACTTGCTAAGGCGGAGGATTGCGCTCGACTGATCACCGTTAAACAAGACGGACAAGGAAATTTCTCAACGATCACTCAAGCGATTGAGAGCATTCCGTCCGGAAATCGTGAGCGAGTGGTGGTGTGGATCGGCGGTGGGACTTACCGCGAGAAGATCACGATCGATTCTTCGAAGCCGTTCGTGACGCTGTACGGTCAGACAGGAAAAATGCCGGTCATATCGTACGACGGAACGGCGTCGGAATTTGGTACAGCCGAGAGCGCGACGGTGGCTGTGGAATCGGATTATTTCGTCGCCGTCAATGTTGCGTTTGTGAATTCAGCTCCAATGCCGGATGCAGGAAGAACAGGAGGACAAGCAGTGGCAATGAGGATATCAGGGGATAAGGCAGCATTCCACCACTGCCAATTCATAGGATTTCAGGACACTCTTTGCGATGACAGAGGCAGACATTTTTTCAAGGATTGTTACATCGAAGGCACGGTCGACTTCATCTTTGGAAATGGCAAATCCCTCTACTTGAAAACAGTAATAAACTCAGTGGCGGAAGGGACAGGAGTGATCACAGCTCAAGCAAGGGAAAATTCCACAGACGACAGCGGCTTCACATTTGCATATTGCAACATCACTGGAACTGGAAACACCTATTTGGGAAGAGCATGGAAGGAGAGAACTCGTGTGGTTTTTGCTTACACTTACATGGGAACACTCATTAACACCCAAGGATGGTCCGATAAAATGCAGGGAACTGAACCTCGAAAGAGTATGTACTACGGTGAGTACAAATGCAAAGGACCCGGGGCGGACAGCACAGGCCGAGCACACTACACGAGAATACTCACGGACGACGAAGCGAAGGCGTTTTTGAGTATGACTTATATCCATGGAAACAAATGGGTTCTACCACCTCCAAGGCTGTCCCTTCTCCCGGTGTCATCGCAATGCCATGGCTGA

Protein sequence

MSRPAVASSFPATVALVLAVVQLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYRQRKANETGAKTLDPRLAKAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGGGTYREKITIDSSKPFVTLYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVAFVNSAPMPDAGRTGGQAVAMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFIFGNGKSLYLKTVINSVAEGTGVITAQARENSTDDSGFTFAYCNITGTGNTYLGRAWKERTRVVFAYTYMGTLINTQGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEAKAFLSMTYIHGNKWVLPPPRLSLLPVSSQCHG

Homology

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BLAST of CmoCh10G008180 vs. ExPASy Swiss-Prot
Match: Q9LY17 (Probable pectinesterase 50 OS=Arabidopsis thaliana OX=3702 GN=PME50 PE=2 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 7.6e-97
Identity = 171/357 (47.90%), Postives = 247/357 (69.19%), Query Frame = 0


Query: 26  ILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYRQRKANETGAKTLDPRLAKAEDCARL 85
           ++  + +V+   T  IP   +Q+ +W   N++ Y QRK       TLDP L  AE   ++
Sbjct: 13  VVFASPVVLATDTDPIPENRAQIPQWFKTNVKPYSQRKG------TLDPALEAAEAARQI 72

Query: 86  ITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGGGTYREKITIDSSKPFVTLYGQTGKM 145
           ITV Q G  NF T+ +AI+SIP+GN+ RV++ +  G Y EK+TID ++PF+TL GQ G  
Sbjct: 73  ITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFITLLGQPGAE 132

Query: 146 PVISYDGTASEFGTAESATVAVESDYFVAVNVAFVNSAPMPDAGRTGGQAVAMRISGDKA 205
            V++Y GTA+++GT ESAT+ V ++YF A ++   N+APMP  G + GQA+AMRI+ DKA
Sbjct: 133 TVLTYHGTAAQYGTVESATLIVWAEYFQAAHLTIKNTAPMPKPG-SQGQALAMRINADKA 192

Query: 206 AFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFIFGNGKSLYLKTVINSVAEGTGVITA 265
           AF+ C+F GFQDTLCDD+G HFFKDCYIEGT DFIFG G SLYL T +++V +G  VITA
Sbjct: 193 AFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHAVGDGLRVITA 252

Query: 266 QARENSTDDSGFTFAYCNITGTG-NTYLGRAWKERTRVVFAYTYMGTLINTQGWSDKM-Q 325
           Q R+++T+ +G+TF +C +TGTG   YLGR+W    +VV+A+T M +++N  GW + + +
Sbjct: 253 QGRQSATEQNGYTFVHCKVTGTGTGIYLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNR 312

Query: 326 GTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEAKAFLSMTYIHGNKWVLPPPR 381
           G +  K+++YGEYKC GPG+    R  YT+ +  +E   FL++ YI G+ W+LPPP+
Sbjct: 313 GYD--KTVFYGEYKCFGPGSHLEKRVPYTQDIDKNEVTPFLTLGYIKGSTWLLPPPK 360

[Close]

BLAST of CmoCh10G008180 vs. ExPASy Swiss-Prot
Match: Q84WM7 (Pectinesterase PPME1 OS=Arabidopsis thaliana OX=3702 GN=PPME1 PE=1 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 3.2e-95
Identity = 168/342 (49.12%), Postives = 232/342 (67.84%), Query Frame = 0


Query: 41  IPAEPSQLDEWIAHNMREYRQRKANETGAKTLDPRLAKAEDCARLITVKQDGQGNFSTIT 100
           IP    Q+ +W   N+    QRK        LDP L  AE   R+I V   G G F T+T
Sbjct: 29  IPEGKPQVAQWFNANVGPLAQRKG-------LDPALVAAEAAPRIINVNPKG-GEFKTLT 88

Query: 101 QAIESIPSGNRERVVVWIGGGTYREKITIDSSKPFVTLYGQTGKMPVISYDGTASEFGTA 160
            AI+S+P+GN +RV++ +  G Y+EK+TID +KPF+TL GQ   MPVI+YDGTA+++GT 
Sbjct: 89  DAIKSVPAGNTKRVIIKMAPGEYKEKVTIDRNKPFITLMGQPNAMPVITYDGTAAKYGTV 148

Query: 161 ESATVAVESDYFVAVNVAFVNSAPMPDAGRTGGQAVAMRISGDKAAFHHCQFIGFQDTLC 220
           +SA++ + SDYF+AVN+   N+AP PD    G QA++MRISG+ AAF++C+F GFQDT+C
Sbjct: 149 DSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTIC 208

Query: 221 DDRGRHFFKDCYIEGTVDFIFGNGKSLYLKTVINSVAEGTGVITAQARENSTDDSGFTFA 280
           DD G HFFKDCY+EGT DFIFG+G S+YL T ++ V +G  VI A A +++ + SG++F 
Sbjct: 209 DDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGIRVIAAHAGKSAEEKSGYSFV 268

Query: 281 YCNITGT-GNTYLGRAWKERTRVVFAYTYMGTLINTQGWSDKMQGTEPRKSMYYGEYKCK 340
           +C +TGT G  YLGRAW    +VV+AYT M +++N  GW +        K+++YGEYKC 
Sbjct: 269 HCKVTGTGGGIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHD-KTVFYGEYKCS 328

Query: 341 GPGADSTGRAHYTRILTDDEAKAFLSMTYIHGNKWVLPPPRL 382
           GPG+    R  +T+ + D EA  FLS+ YI G+KW+LPPP L
Sbjct: 329 GPGSHKAKRVPFTQDIDDKEANRFLSLGYIQGSKWLLPPPAL 361

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BLAST of CmoCh10G008180 vs. ExPASy Swiss-Prot
Match: Q9FKF3 (Putative pectinesterase 63 OS=Arabidopsis thaliana OX=3702 GN=PME63 PE=3 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 7.1e-95
Identity = 169/364 (46.43%), Postives = 239/364 (65.66%), Query Frame = 0


Query: 17  VLAVVQLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYRQRKANETGAKTLDPRL 76
           V  +V ++ ++I + +V       IP    ++++W   N                     
Sbjct: 6   VSLIVTILLVVITSPVVFGNDAAPIPENKGRIEQWFNTN--------------------- 65

Query: 77  AKAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGGGTYREKITIDSSKPFV 136
                      VKQ+G+G+F TIT+AI S+ +GN  RV++ IG G Y+EK+TID SKPF+
Sbjct: 66  -----------VKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFI 125

Query: 137 TLYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVAFVNSAPMPDAGRTGGQAV 196
           TLYG    MPV+++DGTA+++GT +SAT+ V SDYF+AVN+   NSAPMPD  R G QA+
Sbjct: 126 TLYGHPNAMPVLTFDGTAAQYGTVDSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQAL 185

Query: 197 AMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFIFGNGKSLYLKTVINSV 256
           +MRISG+KAAF++C+F G+QDT+CDD G HFFKDCYIEGT DFIFG+G+SLYL T +N V
Sbjct: 186 SMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVV 245

Query: 257 AEGTGVITAQARENSTDDSGFTFAYCNITGTG-NTYLGRAWKERTRVVFAYTYMGTLINT 316
            +G  VITA A +++ + SG++F +C +TGTG   YLGR+W    +VV+AYT M +++N 
Sbjct: 246 GDGIRVITAHAGKSAAEKSGYSFVHCKVTGTGTGIYLGRSWMSHPKVVYAYTDMSSVVNP 305

Query: 317 QGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEAKAFLSMTYIHGNKWV 376
            GW +  +     K+++YGEYKC G G+    R  YT+ + D EAK F+S+ YI G+ W+
Sbjct: 306 SGWQENREAGRD-KTVFYGEYKCTGTGSHKEKRVKYTQDIDDIEAKYFISLGYIQGSSWL 336

Query: 377 LPPP 380
           LPPP
Sbjct: 366 LPPP 336

[Close]

BLAST of CmoCh10G008180 vs. ExPASy Swiss-Prot
Match: Q9LY19 (Probable pectinesterase 48 OS=Arabidopsis thaliana OX=3702 GN=PME48 PE=2 SV=2)

HSP 1 Score: 344.0 bits (881), Expect = 2.3e-93
Identity = 171/366 (46.72%), Postives = 242/366 (66.12%), Query Frame = 0


Query: 17  VLAVVQLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYRQRKANETGAKTLDPRL 76
           V  ++ ++ I +   +  +  T  IP    Q+ +W   ++    QRK        LDP L
Sbjct: 6   VSILLGMLVIFVSPMVFADDLT-PIPEGKPQVVQWFNTHVGPLAQRKG-------LDPAL 65

Query: 77  AKAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGGGTYREKITIDSSKPFV 136
             AE   R+I V   G G F T+T AI+S+P+GN +RV++ +  G YREK+TID +KPF+
Sbjct: 66  VAAEAAPRIINVNPKG-GEFKTLTDAIKSVPAGNTKRVIIKMAHGEYREKVTIDRNKPFI 125

Query: 137 TLYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVAFVNSAPMPDAGRTGGQAV 196
           TL GQ   MPVI+YDGTA+++GT +SA++ + SDYF+AVN+   N+AP PD    G QA+
Sbjct: 126 TLMGQPNAMPVITYDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQAL 185

Query: 197 AMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFIFGNGKSLYLKTVINSV 256
           +MRISG+ AAF++C+F GFQDT+CDD G HFFKDCY+EGT DFIFG+G S+YL T ++ V
Sbjct: 186 SMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVV 245

Query: 257 AEGTGVITAQARENSTDDSGFTFAYCNITGT-GNTYLGRAWKERTRVVFAYTYMGTLINT 316
            +G  VI A A +++ + SG++F +C +TGT G  YLGRAW    +VV+AYT M +++N 
Sbjct: 246 GDGIRVIAAHAGKSAEEKSGYSFVHCKVTGTGGGIYLGRAWMSHPKVVYAYTEMTSVVNP 305

Query: 317 QGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEAKAFLSMTYIHGNKWV 376
            GW +        K+++YGEYKC GPG+    R  +T+ + D EA  FLS+ YI G+KW+
Sbjct: 306 TGWQENKTPAHD-KTVFYGEYKCSGPGSHKAKRVPFTQDIDDKEANCFLSLGYIQGSKWL 361

Query: 377 LPPPRL 382
           LPPP L
Sbjct: 366 LPPPAL 361

[Close]

BLAST of CmoCh10G008180 vs. ExPASy Swiss-Prot
Match: Q9LY18 (Probable pectinesterase 49 OS=Arabidopsis thaliana OX=3702 GN=PME49 PE=2 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 7.3e-92
Identity = 167/363 (46.01%), Postives = 244/363 (67.22%), Query Frame = 0


Query: 18  LAVVQLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYRQRKANETGAKTLDPRLA 77
           LA+V L+ +   + +V+      IPA+ +Q+ +W   N++ + QR+       TLDP L 
Sbjct: 6   LALVALL-VFFASPVVLADDITPIPADRAQIPQWFMANVKPFSQRRG------TLDPELE 65

Query: 78  KAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGGGTYREKITIDSSKPFVT 137
            AE   R+I V Q+G G+F TI  AI+SIP  N+ RV++ +  G Y EK+T+D  +P+VT
Sbjct: 66  AAEASRRVIIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPGIYHEKVTVDVGRPYVT 125

Query: 138 LYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVAFVNSAPMPDAGRTGGQAVA 197
           L G+ G    ++Y GTA+++GT ESAT+ V +  F+A N+  +N++PMP  G T GQA+A
Sbjct: 126 LLGKPGAETNLTYAGTAAKYGTVESATLIVWATNFLAANLNIINTSPMPKPG-TQGQALA 185

Query: 198 MRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFIFGNGKSLYLKTVINSVA 257
           MRI+GDKAAF++C+F GFQDTLCDDRG HFFK+CYIEGT DFIFG G SLYL T +++V 
Sbjct: 186 MRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHAVG 245

Query: 258 EGTGVITAQARENSTDDSGFTFAYCNITGTG-NTYLGRAWKERTRVVFAYTYMGTLINTQ 317
           +G  VI A  R+++T+ +G++F +C +TG G   YLGRAW    +VV++YT M +++N  
Sbjct: 246 DGLRVIAAHNRQSTTEQNGYSFVHCKVTGVGTGIYLGRAWMSHPKVVYSYTEMSSVVNPS 305

Query: 318 GWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEAKAFLSMTYIHGNKWVL 377
           GW +        K+++YGEY C GPG+    R  +T+ + + EA  FL++ YI G+KW+L
Sbjct: 306 GWQENRVRAHD-KTVFYGEYMCTGPGSHKAKRVAHTQDIDNKEASQFLTLGYIKGSKWLL 359

Query: 378 PPP 380
           PPP
Sbjct: 366 PPP 359

[Close]

BLAST of CmoCh10G008180 vs. ExPASy TrEMBL
Match: A0A6J1HB45 (Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111461773 PE=4 SV=1)

HSP 1 Score: 788.9 bits (2036), Expect = 9.9e-225
Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0


Query: 1   MSRPAVASSFPATVALVLAVVQLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYR 60
           MSRPAVASSFPATVALVLAVVQLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYR
Sbjct: 1   MSRPAVASSFPATVALVLAVVQLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYR 60

Query: 61  QRKANETGAKTLDPRLAKAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGG 120
           QRKANETGAKTLDPRLAKAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGG
Sbjct: 61  QRKANETGAKTLDPRLAKAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGG 120

Query: 121 GTYREKITIDSSKPFVTLYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVAFV 180
           GTYREKITIDSSKPFVTLYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVAFV
Sbjct: 121 GTYREKITIDSSKPFVTLYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVAFV 180

Query: 181 NSAPMPDAGRTGGQAVAMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFI 240
           NSAPMPDAGRTGGQAVAMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFI
Sbjct: 181 NSAPMPDAGRTGGQAVAMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFI 240

Query: 241 FGNGKSLYLKTVINSVAEGTGVITAQARENSTDDSGFTFAYCNITGTGNTYLGRAWKERT 300
           FGNGKSLYLKTVINSVAEGTGVITAQARENSTDDSGFTFAYCNITGTGNTYLGRAWKERT
Sbjct: 241 FGNGKSLYLKTVINSVAEGTGVITAQARENSTDDSGFTFAYCNITGTGNTYLGRAWKERT 300

Query: 301 RVVFAYTYMGTLINTQGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEA 360
           RVVFAYTYMGTLINTQGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEA
Sbjct: 301 RVVFAYTYMGTLINTQGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEA 360

Query: 361 KAFLSMTYIHGNKWVLPPPRLSLLPVSSQCHG 393
           KAFLSMTYIHGNKWVLPPPRLSLLPVSSQCHG
Sbjct: 361 KAFLSMTYIHGNKWVLPPPRLSLLPVSSQCHG 392

[Close]

BLAST of CmoCh10G008180 vs. ExPASy TrEMBL
Match: A0A6J1JI92 (Pectinesterase OS=Cucurbita maxima OX=3661 GN=LOC111484834 PE=4 SV=1)

HSP 1 Score: 772.3 bits (1993), Expect = 9.6e-220
Identity = 384/392 (97.96%), Postives = 386/392 (98.47%), Query Frame = 0


Query: 1   MSRPAVASSFPATVALVLAVVQLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYR 60
           MSRPAVASSFPATVALVLAVVQLIT+LIPAAIVVEARTK IPAEPSQLDEWIAHNMREYR
Sbjct: 1   MSRPAVASSFPATVALVLAVVQLITMLIPAAIVVEARTKPIPAEPSQLDEWIAHNMREYR 60

Query: 61  QRKANETGAKTLDPRLAKAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGG 120
           QRKA ETGAK LD RLAKAEDCARLITVKQDGQGNFSTITQAIESIPSGN ERVVVWIGG
Sbjct: 61  QRKAKETGAKALDRRLAKAEDCARLITVKQDGQGNFSTITQAIESIPSGNSERVVVWIGG 120

Query: 121 GTYREKITIDSSKPFVTLYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVAFV 180
           GTYREKITIDSSKPFVTLYGQTGKMPVISYDGTASEFGT ESATVAVESDYFVAVNVAFV
Sbjct: 121 GTYREKITIDSSKPFVTLYGQTGKMPVISYDGTASEFGTVESATVAVESDYFVAVNVAFV 180

Query: 181 NSAPMPDAGRTGGQAVAMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFI 240
           NSAPMPDAGRTGGQAVAMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFI
Sbjct: 181 NSAPMPDAGRTGGQAVAMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFI 240

Query: 241 FGNGKSLYLKTVINSVAEGTGVITAQARENSTDDSGFTFAYCNITGTGNTYLGRAWKERT 300
           FGNGKSLYLKTVINSVAEGTGVITAQARENSTD+SGFTFAYCNITGTGNTYLGRAWKERT
Sbjct: 241 FGNGKSLYLKTVINSVAEGTGVITAQARENSTDESGFTFAYCNITGTGNTYLGRAWKERT 300

Query: 301 RVVFAYTYMGTLINTQGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEA 360
           RVVFAYTYMGTLINTQGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEA
Sbjct: 301 RVVFAYTYMGTLINTQGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEA 360

Query: 361 KAFLSMTYIHGNKWVLPPPRLSLLPVSSQCHG 393
           KAFLSMTYIHGNKWVLPPPRLSLLPVSSQCHG
Sbjct: 361 KAFLSMTYIHGNKWVLPPPRLSLLPVSSQCHG 392

[Close]

BLAST of CmoCh10G008180 vs. ExPASy TrEMBL
Match: A0A1S3BRI5 (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103492397 PE=4 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 2.1e-182
Identity = 319/387 (82.43%), Postives = 348/387 (89.92%), Query Frame = 0


Query: 1   MSRPAVASSFPATVALVLAVV--QLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMRE 60
           M RP VASSF ATVAL LAV+   +I I IP+ ++VEARTKTIPA+ S+LDEWIAHNMRE
Sbjct: 1   MFRPTVASSFSATVALALAVMFQLIILITIPSTVLVEARTKTIPADSSKLDEWIAHNMRE 60

Query: 61  YRQRKANETGAKTLDPRLAKAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWI 120
           Y  RK NETG K LD RLA+AEDC RLITV++DG+GNFSTIT+AIESIPSGNR RVVVWI
Sbjct: 61  YNDRKMNETGIKALDRRLAEAEDCVRLITVRKDGRGNFSTITEAIESIPSGNRRRVVVWI 120

Query: 121 GGGTYREKITIDSSKPFVTLYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVA 180
           GGG YREKITID+SKPFVTLYGQ GK PVI++DGTASEFGT +SATVAVESDYFVAVN+ 
Sbjct: 121 GGGVYREKITIDASKPFVTLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLT 180

Query: 181 FVNSAPMPDAGRTGGQAVAMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVD 240
           FVNSAPMP+ G TGGQAVAMRISGDKAAFH C FIGFQDTLCDDRGRHFF+DCYI+GTVD
Sbjct: 181 FVNSAPMPELGGTGGQAVAMRISGDKAAFHECHFIGFQDTLCDDRGRHFFRDCYIQGTVD 240

Query: 241 FIFGNGKSLYLKTVINSVAEGTGVITAQARENSTDDSGFTFAYCNITGTGNTYLGRAWKE 300
           FIFGNGKSLYLKT INSVAEG GVITAQARE++TD+SGFTFAYCNITGTGNTYLGRAWKE
Sbjct: 241 FIFGNGKSLYLKTTINSVAEGIGVITAQAREDATDESGFTFAYCNITGTGNTYLGRAWKE 300

Query: 301 RTRVVFAYTYMGTLINTQGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDD 360
           RTRVVFAYTYMGTLINT+GWSDKM G++PRKSMYYGEYKCKGPGA S+GR  Y RIL+D 
Sbjct: 301 RTRVVFAYTYMGTLINTEGWSDKMHGSQPRKSMYYGEYKCKGPGATSSGRVKYARILSDV 360

Query: 361 EAKAFLSMTYIHGNKWVLPPPRLSLLP 386
           EAKAFLSMTYIHGNKW+LPPP LS  P
Sbjct: 361 EAKAFLSMTYIHGNKWLLPPPDLSFSP 387

[Close]

BLAST of CmoCh10G008180 vs. ExPASy TrEMBL
Match: A0A0A0M299 (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_1G597780 PE=4 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 2.0e-180
Identity = 312/387 (80.62%), Postives = 347/387 (89.66%), Query Frame = 0


Query: 1   MSRPAVASSFPATVALVLAVV--QLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMRE 60
           M RP VASSFPATVA  + V+   +I I+IP+ +VVEA TKTIPA+ S+LDEWI HNM+E
Sbjct: 1   MFRPTVASSFPATVAFAMGVMLQLIILIIIPSTVVVEAHTKTIPADSSKLDEWIGHNMKE 60

Query: 61  YRQRKANETGAKTLDPRLAKAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWI 120
           Y  RK NETG K LD RLA+AEDC +LITV++DG+GNFSTIT+AI+SIPSGNR RVVVWI
Sbjct: 61  YNDRKTNETGIKALDRRLAEAEDCVQLITVRKDGRGNFSTITEAIDSIPSGNRRRVVVWI 120

Query: 121 GGGTYREKITIDSSKPFVTLYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVA 180
           GGG YREKITID+SKPFVTLYGQ GK P+I++DGTASEFGT +SATVAVESDYFVAVN+ 
Sbjct: 121 GGGVYREKITIDASKPFVTLYGQKGKRPMITFDGTASEFGTVKSATVAVESDYFVAVNLT 180

Query: 181 FVNSAPMPDAGRTGGQAVAMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVD 240
           FVNSAPMP+ G TGGQAVAMRISGDKAAFH C FIGFQDTLCDDRGRHFFKDCY++GTVD
Sbjct: 181 FVNSAPMPELGGTGGQAVAMRISGDKAAFHGCHFIGFQDTLCDDRGRHFFKDCYVQGTVD 240

Query: 241 FIFGNGKSLYLKTVINSVAEGTGVITAQARENSTDDSGFTFAYCNITGTGNTYLGRAWKE 300
           FIFGNGKSLYLKT INSVAEGTGVITAQARE++TD+SGFTFAYCNITGTG+TYLGRAWKE
Sbjct: 241 FIFGNGKSLYLKTTINSVAEGTGVITAQAREDATDESGFTFAYCNITGTGDTYLGRAWKE 300

Query: 301 RTRVVFAYTYMGTLINTQGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDD 360
           RTRVVFAYTYMGTLINT+GWSDKM G++PRKSMYYGEYKCKGPGA  +GR  Y RIL+D 
Sbjct: 301 RTRVVFAYTYMGTLINTEGWSDKMHGSQPRKSMYYGEYKCKGPGATPSGRVKYARILSDV 360

Query: 361 EAKAFLSMTYIHGNKWVLPPPRLSLLP 386
           EAKAFLSMTYIHGNKW+LPPP LSL P
Sbjct: 361 EAKAFLSMTYIHGNKWLLPPPDLSLSP 387

[Close]

BLAST of CmoCh10G008180 vs. ExPASy TrEMBL
Match: A0A6J1D0K0 (Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111016481 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 4.2e-175
Identity = 309/382 (80.89%), Postives = 337/382 (88.22%), Query Frame = 0


Query: 1   MSRPAVASSFPATVALVLAVVQLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYR 60
           M RPAVASS P  VA+ LAV+QLI I++PAA+V  ARTK IPAEPS+LDEWI +NM+EY 
Sbjct: 1   MYRPAVASSSPVAVAIALAVIQLI-IILPAAVV--ARTKPIPAEPSKLDEWIENNMKEYH 60

Query: 61  QRKANETGAKTLDPRLAKAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGG 120
           +RKAN+TG K LD RLA AED  RLITV+ DG+GNF+TIT AIESIP+GN  RV+VWI G
Sbjct: 61  ERKANDTGVKALDKRLAMAEDAVRLITVRPDGRGNFTTITAAIESIPAGNTARVIVWIAG 120

Query: 121 GTYREKITIDSSKPFVTLYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVAFV 180
           G YREKITID+SKPFVTLYGQ GKMPVI++DGTASEFGT +SATVAVESDYFVAVN+AFV
Sbjct: 121 GIYREKITIDASKPFVTLYGQNGKMPVITFDGTASEFGTVQSATVAVESDYFVAVNIAFV 180

Query: 181 NSAPMPDAGRTGGQAVAMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFI 240
           NSA MPD   +GGQAVAMRISGDKAAFHHC FIGFQDTLCDDRGRHFFKDCYIEGTVDFI
Sbjct: 181 NSAAMPDVRVSGGQAVAMRISGDKAAFHHCHFIGFQDTLCDDRGRHFFKDCYIEGTVDFI 240

Query: 241 FGNGKSLYLKTVINSVAEGTGVITAQARENSTDDSGFTFAYCNITGTGNTYLGRAWKERT 300
           FGNGKSLYLKT INSVAEG GVITAQARE++TDDSGFTF YCNITGTGNTYLGRAWKERT
Sbjct: 241 FGNGKSLYLKTRINSVAEGMGVITAQAREDATDDSGFTFVYCNITGTGNTYLGRAWKERT 300

Query: 301 RVVFAYTYMGTLINTQGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEA 360
           RVVFAYTYMG LINT+GWSDKM   EPRKSMYYGEYKC GPGA   GR  Y RIL+D+EA
Sbjct: 301 RVVFAYTYMGNLINTEGWSDKMHHGEPRKSMYYGEYKCMGPGATPAGRVKYARILSDEEA 360

Query: 361 KAFLSMTYIHGNKWVLPPPRLS 383
           +AFLSMTYIHGNKW+LPPP LS
Sbjct: 361 RAFLSMTYIHGNKWLLPPPLLS 379

[Close]

BLAST of CmoCh10G008180 vs. TAIR 10
Match: AT5G07430.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 355.5 bits (911), Expect = 5.4e-98
Identity = 171/357 (47.90%), Postives = 247/357 (69.19%), Query Frame = 0


Query: 26  ILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYRQRKANETGAKTLDPRLAKAEDCARL 85
           ++  + +V+   T  IP   +Q+ +W   N++ Y QRK       TLDP L  AE   ++
Sbjct: 13  VVFASPVVLATDTDPIPENRAQIPQWFKTNVKPYSQRKG------TLDPALEAAEAARQI 72

Query: 86  ITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGGGTYREKITIDSSKPFVTLYGQTGKM 145
           ITV Q G  NF T+ +AI+SIP+GN+ RV++ +  G Y EK+TID ++PF+TL GQ G  
Sbjct: 73  ITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFITLLGQPGAE 132

Query: 146 PVISYDGTASEFGTAESATVAVESDYFVAVNVAFVNSAPMPDAGRTGGQAVAMRISGDKA 205
            V++Y GTA+++GT ESAT+ V ++YF A ++   N+APMP  G + GQA+AMRI+ DKA
Sbjct: 133 TVLTYHGTAAQYGTVESATLIVWAEYFQAAHLTIKNTAPMPKPG-SQGQALAMRINADKA 192

Query: 206 AFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFIFGNGKSLYLKTVINSVAEGTGVITA 265
           AF+ C+F GFQDTLCDD+G HFFKDCYIEGT DFIFG G SLYL T +++V +G  VITA
Sbjct: 193 AFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHAVGDGLRVITA 252

Query: 266 QARENSTDDSGFTFAYCNITGTG-NTYLGRAWKERTRVVFAYTYMGTLINTQGWSDKM-Q 325
           Q R+++T+ +G+TF +C +TGTG   YLGR+W    +VV+A+T M +++N  GW + + +
Sbjct: 253 QGRQSATEQNGYTFVHCKVTGTGTGIYLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNR 312

Query: 326 GTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEAKAFLSMTYIHGNKWVLPPPR 381
           G +  K+++YGEYKC GPG+    R  YT+ +  +E   FL++ YI G+ W+LPPP+
Sbjct: 313 GYD--KTVFYGEYKCFGPGSHLEKRVPYTQDIDKNEVTPFLTLGYIKGSTWLLPPPK 360

[Close]

BLAST of CmoCh10G008180 vs. TAIR 10
Match: AT1G69940.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 350.1 bits (897), Expect = 2.3e-96
Identity = 168/342 (49.12%), Postives = 232/342 (67.84%), Query Frame = 0


Query: 41  IPAEPSQLDEWIAHNMREYRQRKANETGAKTLDPRLAKAEDCARLITVKQDGQGNFSTIT 100
           IP    Q+ +W   N+    QRK        LDP L  AE   R+I V   G G F T+T
Sbjct: 29  IPEGKPQVAQWFNANVGPLAQRKG-------LDPALVAAEAAPRIINVNPKG-GEFKTLT 88

Query: 101 QAIESIPSGNRERVVVWIGGGTYREKITIDSSKPFVTLYGQTGKMPVISYDGTASEFGTA 160
            AI+S+P+GN +RV++ +  G Y+EK+TID +KPF+TL GQ   MPVI+YDGTA+++GT 
Sbjct: 89  DAIKSVPAGNTKRVIIKMAPGEYKEKVTIDRNKPFITLMGQPNAMPVITYDGTAAKYGTV 148

Query: 161 ESATVAVESDYFVAVNVAFVNSAPMPDAGRTGGQAVAMRISGDKAAFHHCQFIGFQDTLC 220
           +SA++ + SDYF+AVN+   N+AP PD    G QA++MRISG+ AAF++C+F GFQDT+C
Sbjct: 149 DSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTIC 208

Query: 221 DDRGRHFFKDCYIEGTVDFIFGNGKSLYLKTVINSVAEGTGVITAQARENSTDDSGFTFA 280
           DD G HFFKDCY+EGT DFIFG+G S+YL T ++ V +G  VI A A +++ + SG++F 
Sbjct: 209 DDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGIRVIAAHAGKSAEEKSGYSFV 268

Query: 281 YCNITGT-GNTYLGRAWKERTRVVFAYTYMGTLINTQGWSDKMQGTEPRKSMYYGEYKCK 340
           +C +TGT G  YLGRAW    +VV+AYT M +++N  GW +        K+++YGEYKC 
Sbjct: 269 HCKVTGTGGGIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHD-KTVFYGEYKCS 328

Query: 341 GPGADSTGRAHYTRILTDDEAKAFLSMTYIHGNKWVLPPPRL 382
           GPG+    R  +T+ + D EA  FLS+ YI G+KW+LPPP L
Sbjct: 329 GPGSHKAKRVPFTQDIDDKEANRFLSLGYIQGSKWLLPPPAL 361

[Close]

BLAST of CmoCh10G008180 vs. TAIR 10
Match: AT5G61680.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 349.0 bits (894), Expect = 5.0e-96
Identity = 169/364 (46.43%), Postives = 239/364 (65.66%), Query Frame = 0


Query: 17  VLAVVQLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYRQRKANETGAKTLDPRL 76
           V  +V ++ ++I + +V       IP    ++++W   N                     
Sbjct: 6   VSLIVTILLVVITSPVVFGNDAAPIPENKGRIEQWFNTN--------------------- 65

Query: 77  AKAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGGGTYREKITIDSSKPFV 136
                      VKQ+G+G+F TIT+AI S+ +GN  RV++ IG G Y+EK+TID SKPF+
Sbjct: 66  -----------VKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFI 125

Query: 137 TLYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVAFVNSAPMPDAGRTGGQAV 196
           TLYG    MPV+++DGTA+++GT +SAT+ V SDYF+AVN+   NSAPMPD  R G QA+
Sbjct: 126 TLYGHPNAMPVLTFDGTAAQYGTVDSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQAL 185

Query: 197 AMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFIFGNGKSLYLKTVINSV 256
           +MRISG+KAAF++C+F G+QDT+CDD G HFFKDCYIEGT DFIFG+G+SLYL T +N V
Sbjct: 186 SMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVV 245

Query: 257 AEGTGVITAQARENSTDDSGFTFAYCNITGTG-NTYLGRAWKERTRVVFAYTYMGTLINT 316
            +G  VITA A +++ + SG++F +C +TGTG   YLGR+W    +VV+AYT M +++N 
Sbjct: 246 GDGIRVITAHAGKSAAEKSGYSFVHCKVTGTGTGIYLGRSWMSHPKVVYAYTDMSSVVNP 305

Query: 317 QGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEAKAFLSMTYIHGNKWV 376
            GW +  +     K+++YGEYKC G G+    R  YT+ + D EAK F+S+ YI G+ W+
Sbjct: 306 SGWQENREAGRD-KTVFYGEYKCTGTGSHKEKRVKYTQDIDDIEAKYFISLGYIQGSSWL 336

Query: 377 LPPP 380
           LPPP
Sbjct: 366 LPPP 336

[Close]

BLAST of CmoCh10G008180 vs. TAIR 10
Match: AT5G07410.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 344.0 bits (881), Expect = 1.6e-94
Identity = 171/366 (46.72%), Postives = 242/366 (66.12%), Query Frame = 0


Query: 17  VLAVVQLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYRQRKANETGAKTLDPRL 76
           V  ++ ++ I +   +  +  T  IP    Q+ +W   ++    QRK        LDP L
Sbjct: 6   VSILLGMLVIFVSPMVFADDLT-PIPEGKPQVVQWFNTHVGPLAQRKG-------LDPAL 65

Query: 77  AKAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGGGTYREKITIDSSKPFV 136
             AE   R+I V   G G F T+T AI+S+P+GN +RV++ +  G YREK+TID +KPF+
Sbjct: 66  VAAEAAPRIINVNPKG-GEFKTLTDAIKSVPAGNTKRVIIKMAHGEYREKVTIDRNKPFI 125

Query: 137 TLYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVAFVNSAPMPDAGRTGGQAV 196
           TL GQ   MPVI+YDGTA+++GT +SA++ + SDYF+AVN+   N+AP PD    G QA+
Sbjct: 126 TLMGQPNAMPVITYDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQAL 185

Query: 197 AMRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFIFGNGKSLYLKTVINSV 256
           +MRISG+ AAF++C+F GFQDT+CDD G HFFKDCY+EGT DFIFG+G S+YL T ++ V
Sbjct: 186 SMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVV 245

Query: 257 AEGTGVITAQARENSTDDSGFTFAYCNITGT-GNTYLGRAWKERTRVVFAYTYMGTLINT 316
            +G  VI A A +++ + SG++F +C +TGT G  YLGRAW    +VV+AYT M +++N 
Sbjct: 246 GDGIRVIAAHAGKSAEEKSGYSFVHCKVTGTGGGIYLGRAWMSHPKVVYAYTEMTSVVNP 305

Query: 317 QGWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEAKAFLSMTYIHGNKWV 376
            GW +        K+++YGEYKC GPG+    R  +T+ + D EA  FLS+ YI G+KW+
Sbjct: 306 TGWQENKTPAHD-KTVFYGEYKCSGPGSHKAKRVPFTQDIDDKEANCFLSLGYIQGSKWL 361

Query: 377 LPPPRL 382
           LPPP L
Sbjct: 366 LPPPAL 361

[Close]

BLAST of CmoCh10G008180 vs. TAIR 10
Match: AT5G07420.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 339.0 bits (868), Expect = 5.2e-93
Identity = 167/363 (46.01%), Postives = 244/363 (67.22%), Query Frame = 0


Query: 18  LAVVQLITILIPAAIVVEARTKTIPAEPSQLDEWIAHNMREYRQRKANETGAKTLDPRLA 77
           LA+V L+ +   + +V+      IPA+ +Q+ +W   N++ + QR+       TLDP L 
Sbjct: 6   LALVALL-VFFASPVVLADDITPIPADRAQIPQWFMANVKPFSQRRG------TLDPELE 65

Query: 78  KAEDCARLITVKQDGQGNFSTITQAIESIPSGNRERVVVWIGGGTYREKITIDSSKPFVT 137
            AE   R+I V Q+G G+F TI  AI+SIP  N+ RV++ +  G Y EK+T+D  +P+VT
Sbjct: 66  AAEASRRVIIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPGIYHEKVTVDVGRPYVT 125

Query: 138 LYGQTGKMPVISYDGTASEFGTAESATVAVESDYFVAVNVAFVNSAPMPDAGRTGGQAVA 197
           L G+ G    ++Y GTA+++GT ESAT+ V +  F+A N+  +N++PMP  G T GQA+A
Sbjct: 126 LLGKPGAETNLTYAGTAAKYGTVESATLIVWATNFLAANLNIINTSPMPKPG-TQGQALA 185

Query: 198 MRISGDKAAFHHCQFIGFQDTLCDDRGRHFFKDCYIEGTVDFIFGNGKSLYLKTVINSVA 257
           MRI+GDKAAF++C+F GFQDTLCDDRG HFFK+CYIEGT DFIFG G SLYL T +++V 
Sbjct: 186 MRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHAVG 245

Query: 258 EGTGVITAQARENSTDDSGFTFAYCNITGTG-NTYLGRAWKERTRVVFAYTYMGTLINTQ 317
           +G  VI A  R+++T+ +G++F +C +TG G   YLGRAW    +VV++YT M +++N  
Sbjct: 246 DGLRVIAAHNRQSTTEQNGYSFVHCKVTGVGTGIYLGRAWMSHPKVVYSYTEMSSVVNPS 305

Query: 318 GWSDKMQGTEPRKSMYYGEYKCKGPGADSTGRAHYTRILTDDEAKAFLSMTYIHGNKWVL 377
           GW +        K+++YGEY C GPG+    R  +T+ + + EA  FL++ YI G+KW+L
Sbjct: 306 GWQENRVRAHD-KTVFYGEYMCTGPGSHKAKRVAHTQDIDNKEASQFLTLGYIKGSKWLL 359

Query: 378 PPP 380
           PPP
Sbjct: 366 PPP 359

The following BLAST results are available for this feature:

BLAST of CmoCh10G008180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LY17	7.6e-97	47.90	Probable pectinesterase 50 OS=Arabidopsis thaliana OX=3702 GN=PME50 PE=2 SV=1	[more]
Q84WM7	3.2e-95	49.12	Pectinesterase PPME1 OS=Arabidopsis thaliana OX=3702 GN=PPME1 PE=1 SV=1	[more]
Q9FKF3	7.1e-95	46.43	Putative pectinesterase 63 OS=Arabidopsis thaliana OX=3702 GN=PME63 PE=3 SV=2	[more]
Q9LY19	2.3e-93	46.72	Probable pectinesterase 48 OS=Arabidopsis thaliana OX=3702 GN=PME48 PE=2 SV=2	[more]
Q9LY18	7.3e-92	46.01	Probable pectinesterase 49 OS=Arabidopsis thaliana OX=3702 GN=PME49 PE=2 SV=1	[more]

BLAST of CmoCh10G008180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HB45	9.9e-225	100.00	Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111461773 PE=4 SV=1	[more]
A0A6J1JI92	9.6e-220	97.96	Pectinesterase OS=Cucurbita maxima OX=3661 GN=LOC111484834 PE=4 SV=1	[more]
A0A1S3BRI5	2.1e-182	82.43	Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103492397 PE=4 SV=1	[more]
A0A0A0M299	2.0e-180	80.62	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_1G597780 PE=4 SV=1	[more]
A0A6J1D0K0	4.2e-175	80.89	Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111016481 PE=4 SV=1	[more]

BLAST of CmoCh10G008180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07430.1	5.4e-98	47.90	Pectin lyase-like superfamily protein	[more]
AT1G69940.1	2.3e-96	49.12	Pectin lyase-like superfamily protein	[more]
AT5G61680.1	5.0e-96	46.43	Pectin lyase-like superfamily protein	[more]
AT5G07410.1	1.6e-94	46.72	Pectin lyase-like superfamily protein	[more]
AT5G07420.1	5.2e-93	46.01	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 80..377 e-value: 5.4E-102 score: 343.4
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 86..372 e-value: 3.3E-67 score: 226.3
None	No IPR available	PANTHER	PTHR31321	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	coord: 19..379
None	No IPR available	PANTHER	PTHR31321:SF30	PECTINESTERASE	coord: 19..379
IPR033131	Pectinesterase, Asp active site	PROSITE	PS00503	PECTINESTERASE_2	coord: 233..242
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 83..375

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G008180.1	CmoCh10G008180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity