CmoCh10G007800 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATGATGAAAGCGCCATGGATGAATGGAATATTAAACAGGTGAGAGAGAGGAGAGGTAGGGAAATGAAGAAAATGATAGGTGAAAGAAGTTAAAATGTTTAAATCCATACATTTATTACTTTTAGCAGCTTGCAGCAAAAAATGATGGATGAAGATTAATGCAGAAACAAAGAATTACAACTCAACCACGCTTGACCGGATCGAAGTTGGAGACGCCTATCACAGCCCCCAATATGGCCACCACCACAGTTCCACCGGCAGCAATGCTGAGCAAGAAGTTCTTCAGCGACGGTGAGACTCCAGGTCCTGCAGCCTCTGCAACCTCCGGAATTACCATCGACGCCGTCAGAGCTGCGGCGGTTAGTCCAGTGATGGCCTTCTCCTTCAAGGACGATCGGACTGCGACGAGCCTCCCGCTAGATGTCGGCGCGGCGGCGATGGCCTTGCGAGACCTCGAAGAAGAAGAAGCAGGCAATGGATTGAAGAAGGCGTGGTTGGACAGTCTCTTGTGGGTGGCGTTAGTCAATGGCAGGGCCAGTGAAACTGTAGAAGTGGAAGCCATTGATATGATTCGAAAGCTCTGCGAATTTCCGGAATTGGGGATTTTGGTTTCGGAAGTGGGCCAAGGAAGTAGAAAAGCGGTGGAGAGGCGGAAATTGGGGAGATTTTGGGAGAGCTCGAAATCTTCATCTCTATCCGACGTGGCAACTTCTTTATGCCTTATTGGCGGATAGCCTTATCCTATTCGTCGTTTTTTTGTTTTATTTGTCTTTAAAGTGGAAGCCATTGATTAGATGTTACTTTTATTCTCTCTCTTTTTTTTTTTCTTAGTTTTATTTTAGATTAAATTACCAATTTAGTTTCTTAAATTTGAACTGTGTACCTACCAACTCTCTGAAATTCTAAAACTATCCTAAAAATTTAGTTTCAG ATGTATGATGAAAGCGCCATGGATGAATGGAATATTAAACAGAAACAAAGAATTACAACTCAACCACGCTTGACCGGATCGAAGTTGGAGACGCCTATCACAGCCCCCAATATGGCCACCACCACAGTTCCACCGGCAGCAATGCTGAGCAAGAAGTTCTTCAGCGACGGTGAGACTCCAGGTCCTGCAGCCTCTGCAACCTCCGGAATTACCATCGACGCCGTCAGAGCTGCGGCGGTTAGTCCAGTGATGGCCTTCTCCTTCAAGGACGATCGGACTGCGACGAGCCTCCCGCTAGATGTCGGCGCGGCGGCGATGGCCTTGCGAGACCTCGAAGAAGAAGAAGCAGGCAATGGATTGAAGAAGGCGTGGTTGGACAGTCTCTTGTGGGTGGCGTTAGTCAATGGCAGGGCCAGTGAAACTGTAGAAGTGGAAGCCATTGATATGATTCGAAAGCTCTGCGAATTTCCGGAATTGGGGATTTTGGTTTCGGAAGTGGGCCAAGGAAGTAGAAAAGCGGTGGAGAGGCGGAAATTGGGGAGATTTTGGGAGAGCTCGAAATCTTCATCTCTATCCGACGTGGCAACTTCTTTATGCCTTATTGGCGGATAGCCTTATCCTATTCGTCGTTTTTTTGTTTTATTTGTCTTTAAAGTGGAAGCCATTGATTAGATGTTACTTTTATTCTCTCTCTTTTTTTTTTTCTTAGTTTTATTTTAGATTAAATTACCAATTTAGTTTCTTAAATTTGAACTGTGTACCTACCAACTCTCTGAAATTCTAAAACTATCCTAAAAATTTAGTTTCAG ATGTATGATGAAAGCGCCATGGATGAATGGAATATTAAACAGAAACAAAGAATTACAACTCAACCACGCTTGACCGGATCGAAGTTGGAGACGCCTATCACAGCCCCCAATATGGCCACCACCACAGTTCCACCGGCAGCAATGCTGAGCAAGAAGTTCTTCAGCGACGGTGAGACTCCAGGTCCTGCAGCCTCTGCAACCTCCGGAATTACCATCGACGCCGTCAGAGCTGCGGCGGTTAGTCCAGTGATGGCCTTCTCCTTCAAGGACGATCGGACTGCGACGAGCCTCCCGCTAGATGTCGGCGCGGCGGCGATGGCCTTGCGAGACCTCGAAGAAGAAGAAGCAGGCAATGGATTGAAGAAGGCGTGGTTGGACAGTCTCTTGTGGGTGGCGTTAGTCAATGGCAGGGCCAGTGAAACTGTAGAAGTGGAAGCCATTGATATGATTCGAAAGCTCTGCGAATTTCCGGAATTGGGGATTTTGGTTTCGGAAGTGGGCCAAGGAAGTAGAAAAGCGGTGGAGAGGCGGAAATTGGGGAGATTTTGGGAGAGCTCGAAATCTTCATCTCTATCCGACGTGGCAACTTCTTTATGCCTTATTGGCGGATAG MYDESAMDEWNIKQKQRITTQPRLTGSKLETPITAPNMATTTVPPAAMLSKKFFSDGETPGPAASATSGITIDAVRAAAVSPVMAFSFKDDRTATSLPLDVGAAAMALRDLEEEEAGNGLKKAWLDSLLWVALVNGRASETVEVEAIDMIRKLCEFPELGILVSEVGQGSRKAVERRKLGRFWESSKSSSLSDVATSLCLIGG Homology
BLAST of CmoCh10G007800 vs. ExPASy TrEMBL
Match: A0A5A7UIW0 (Replication protein A 70 kDa DNA-binding subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001760 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 1.8e-36 Identity = 88/116 (75.86%), Postives = 99/116 (85.34%), Query Frame = 0
BLAST of CmoCh10G007800 vs. ExPASy TrEMBL
Match: A0A5N5MFU5 (PABS domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_010392 PE=3 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 9.6e-22 Identity = 77/141 (54.61%), Postives = 90/141 (63.83%), Query Frame = 0
BLAST of CmoCh10G007800 vs. ExPASy TrEMBL
Match: A0A218WXK4 (Rep-A_N domain-containing protein OS=Punica granatum OX=22663 GN=CDL15_Pgr028923 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 3.6e-21 Identity = 72/126 (57.14%), Postives = 86/126 (68.25%), Query Frame = 0
BLAST of CmoCh10G007800 vs. ExPASy TrEMBL
Match: A0A7J7G758 (Replication protein A subunit OS=Camellia sinensis OX=4442 GN=HYC85_026397 PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.4e-20 Identity = 69/128 (53.91%), Postives = 84/128 (65.62%), Query Frame = 0
BLAST of CmoCh10G007800 vs. ExPASy TrEMBL
Match: A0A498HYV1 (Rep-A_N domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_029498 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 2.4e-20 Identity = 76/126 (60.32%), Postives = 86/126 (68.25%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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