CmoCh10G007400 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G007400
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	GATA transcription factor 21
Location	Cmo_Chr10: 3395687 .. 3400058 (-)
RNA-Seq Expression	CmoCh10G007400
Synteny	CmoCh10G007400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTTCTGGTGAGATTGTGTTTCTTGAAGTTTTTGTTTCTTTCTTTGTCCTGAAAGGCACGTGAATGTCTCATTTATTAACCCCTAGGCCCAGCTCCCCCTCTCCCCTCCGCCCTATCCTTCCGCCCTCTCCTCCGCCATGGCTCCGCCTTATCACGACGACCTTCTCCGCCGTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTCTCTTTCCCTGCCCCCGATCACTCCAACTCCGACGACCCTCGCCGGCTGCAGCTCAAACACGAGGTATATTTTCAATTCCGACGACCCTTTAATTTCTTTTTCAAAAATTTCTGATTTTTTATTTTTTTATTTTTTATTCATAGAGTGAAAGCTCAAGCTGCTGTGAGAATCATAATACTCATAATGATTTGGTCAACTGGTCTTCTTCTTCTTCTAAGATTAGATTGCTGATAAATTCTAACCAAATCAACACCGCCACCCAGATGATCCACGGCGGTCGGAACTCCCATGATCTTAACCGGACAACCATGCTAAACGACGGCGCCGCCATAATCAGAACTTGTTCCGACTGTAACACCACAAAAACTCCCCTTTGGAGGAGCGGCCCAAGAGGCCCTAAGGTAATTTCATTCCATTTAAAGCACCATTCTTTCTTACTCTTTAAAATTTAAAATTTTTTTTTTTATAAAATTTAATTTATGATATAAACAGACTGTTAATTTTGTTGGGAATATATTTTAATAATCAGTTAATATCTTAGAATATGATCTCTCCCACTTTCTTGGGAATGAAATTAATCTTCTTCAGAATTCTCGAAACTCTTTCTCCAATCCTTTTGAAATTTTCTTTCAAGAGGCTCCCATAATCTTTGACTCTCGAAACTCTCTTCTCCAATTGAGATTTTGTTTCAAGAAGCTCCCACAAACCTTGACTTGTGTTCGAGTCGTAGTAAAGAAGATCTTATAGAATATTGAACAACTTCTGTGTGATTGGAATATTTGCATCATTCTTAACATTAGAATATATTTTACACCAGTATAATTAATCAATTAATTTTTTTTCTTTTATTTTTTTTTTCTAGAAACAAGTTAATTAATAGTATATATTTTATTTTTTGGGTATATTTTTTTATTAATTGTGGAATATATTTTATTTTTGAGAGTCATATTCCGTGGTAAAATATATTTTATATAGTCTTAATTAATTAAATTTTTTTTGAAATGGTTGACAGTATATTTAATTAATTACTTTTTTAAAAAAATTAATTTAATTATTAATATATTAGCTGATAGCTTGTATTCTATTTAAAGATATTTATTTTATTATGATTATAAGTGGCTTGGGAATTAAACAATTCTAGGGTTTGTTAAATTTGGGGTTATAATTTCCATTATTATGCAGTCTCTTTGCAACGCCTGTGGAATCCGGCAGAGAAAAGCAAGACGAGCGATGGCGGAAGCGGCGGCAATGAACGGCGGTATTCCATGCGGCGGAAAATCGGCGGCAATAATTCTGAAGACGAACAAGGCGGTGCAACACAAGATAATGACAAAGCCGGCAGCGAAGAAATTGAAAAGGAAGCGGAAAGACGACGCCGTCGTAGCCGGCGGCGGCGGCGGCTGCGGCGGAAAGAAGGGTTGTTTTGAAAATATAAAAATGGGGCGGCGATTGAGCGAGATTTCTTCCTCTTACCAGCGAGTTTTCCCACAGGACGAAAGAGAAGCGGCAATTTTGCTCATGACCCTATCTTATGGCCTTCTTCATGGTTGAATTTTTATAATTAATTAATTAATTATATATTTTTAAATTTTATAGCCTTTTCTTTTCTTTTTTAATTTAATTTTCTATTAAATGCTAATGCATTTTAAAGATAAAAAGTTTTCAAATAATTAGAATCAAGACATTGAGACAAATATATATATATATATATTATTGTATTTGTGTGTGTATATATTATTGTATATATTTTAAACATAATTTAATTAAATAATATAATATACACATATTTAAATTTAGTTTAATTCTAAAATTTTATATCATTTTTGTAAAATATTATGACGATATTGCTATTATTTTATGTGGTTAACAAATAATTACTTGTTTGACCTTAACCAAATATTATCTGATCCAATATAATTAATATATCTCCTTTTTCTCAAAGATGGTATAAGATAAAAATTAAAATTATTAGACAGAGAAAAAGACTGACAAAATCTTAGCCCACGTAAAATTACACATACAACAGGACCCTCATTAGAATTTGGATCAGGATTCATCAGAATTTGGATCAGGATTCGTAATCTAAATTTGCATATGATGGTCCTGACATGATCACGTTACTTGCTTTTTACTCGCTTAGGAGTAAAGACTATCTCCACAGACAAACACAAGTCTTTCGCGTATGTTTTATTCTTACTGGCATACATCAAAGAAAAATTTTTAGGAGGTTACCAGTAAAGCACATTCAACTATGGAATTTCTATGATTGAGCTATAAAAAGAAAGGTACACCTTATTAGTATAAGTAGTAACTTTCATTTCCTTTGAGTATTTCTTAGTCATTCTATCTTCAGGATTGCTCTCGTTTGAAAGTAGTTTTAGTTCATTTATGTACCTCTCATTTATTTGGGTGTCAATAAAAATCTTTTTAAATCTGAATGGATAGAAGTGTGAATATTTTCATTTAAATGTATTAAAAAAAATAATCATTTAAATATTTTCACCATGAACTTTCAAGTTCTTAAAAAGTGAATAGACGATGGTGATTGGTGGATGACACACAGCTGGAAAAATCAGCTTTTTTTATTTAAAAAAAAAAAAAAAAAATCCTCCTCTCTATTCTTACCGTTTTAACTGTCTTCTTATTTTTTACCGTTGACTTTTTCTTTTTTAAATTCACTCATTATTTAAAAAATATAAAATAAAATAAAATATCCTTAAAAAATTCAATAATGGACGAAGAGAAGAGAAGCCCAAGCTTGAAGATGAAGCTGACCCAATTCTCATCCTTATTGGGCTTCTCTATTTTCCTCCCCTCTACAAACCTCTTCATTGCACCGCCACTCACTAACCGCCGATTCTGGAACTGTTTTCGATTCCAATCTTAATTCGTCTCTTTCCAGTAGCCTTCTATTCGACGAATCAATCGCCGGTTGTGCTTGAAATGGCGAGCTATCTATGGAGGAAGTACGCCGATTATCTCTACACCAAGTGGGAAAGAACGATTCTATGGGACATGGTTGATCCGTATAGGCGACCTAAATCGTTTACGCCTTTGGTTACCATCTATATTGCTGCCTTTTACACTGGAGTCGTCGGCGCTGCCATTACCGAGCAGCTCTACAAGGTAATTTTGCCATTGTTGCTTCGATTGTTTTTCCCCAATTTATCGTTTAACTTGAGCGTGTTTATCCAAGTGCTTTTGATTCTATTCAATTGAGGGTGGTGATTAGGGTTTAATAATGCCTTGGCATGGGTTAAGTGGCTAAGGATTTTTTGTAATTATCATCTAGGTTTAATTCTTCTAAATTGGTGTTCTTCCTGGTAGTTTTTTGGATTTGGGATTGCTCTTTTTTTGTATGTTCTTGTACATTCTTTTCATATATCTGAAAGATTGGTTTCTGATCGTAAGAAGAAAGTGAAATTCTGTTTAAACCATAGTTTGAGATCGCACCTTGGTTGGAAAGGAGAACGAAACATTCTTGTAAGGGTGTCGAAACTTCTCCCTAATAAATGCGTTTTAAAACCGTGTGATTGACGGTGATGCGTAATGAGCCAAAGTGGATAATATTTGTTAGTGGTAGGCTTGGGCTGTTACAAATGGTATCAGAGCTAAACACCGGGTGGTGTGGTAGCGAGGTTGGCCCCTAAGGGGGTGGATTGTGAGATCCCACATTAGTTGAAGAGGGGAAGGAAGTATTCGTTACAAGAGCATGGAAACCTCTCTCTAGTAGACGTGTTTAGAACCATGAGGCTAACAGTGATACGTAACGGATCAAAGCGGACAATATCTGCTAGCAGTTGGCTTGAACTGTTATAAATGGTATCAGAGCCAGACACTGTGCGATGTGTCGGCGAGGACACTGGGCCCTCAAGGAGGTGGATTGTGAGATCCCACCTCGGTTGGAGAGGGGAACAAAACATTCCTTATAAGGATGTGGAAACCTCTCCCTAATAGACACGTTTTAAGCGTGGTGTAGGATATAAGATGCTAAAAGCATAATTTGTGGTAGCTATATCAACCTCTGCAGTCCTTATGAAAATGTGCAGGAAAAGTATTGGGAAGATCACCCTGGGGAAGATGTACCTCTAATGAAACCAAAGTTTTATTATGGACCCTGGAGAGTAATGAGGGGTGAAGTCCCTGCACACACCAAGTGA

mRNA sequence

CAAATTTCTGGTGAGATTGTGTTTCTTGAAGTTTTTGTTTCTTTCTTTGTCCTGAAAGGCACGTGAATGTCTCATTTATTAACCCCTAGGCCCAGCTCCCCCTCTCCCCTCCGCCCTATCCTTCCGCCCTCTCCTCCGCCATGGCTCCGCCTTATCACGACGACCTTCTCCGCCGTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTCTCTTTCCCTGCCCCCGATCACTCCAACTCCGACGACCCTCGCCGGCTGCAGCTCAAACACGAGAGTGAAAGCTCAAGCTGCTGTGAGAATCATAATACTCATAATGATTTGGTCAACTGGTCTTCTTCTTCTTCTAAGATTAGATTGCTGATAAATTCTAACCAAATCAACACCGCCACCCAGATGATCCACGGCGGTCGGAACTCCCATGATCTTAACCGGACAACCATGCTAAACGACGGCGCCGCCATAATCAGAACTTGTTCCGACTGTAACACCACAAAAACTCCCCTTTGGAGGAGCGGCCCAAGAGGCCCTAAGTCTCTTTGCAACGCCTGTGGAATCCGGCAGAGAAAAGCAAGACGAGCGATGGCGGAAGCGGCGGCAATGAACGGCGGTATTCCATGCGGCGGAAAATCGGCGGCAATAATTCTGAAGACGAACAAGGCGGTGCAACACAAGATAATGACAAAGCCGGCAGCGAAGAAATTGAAAAGGAAGCGGAAAGACGACGCCGTCGTAGCCGGCGGCGGCGGCGGCTGCGGCGGAAAGAAGGGTTGTTTTGAAAATATAAAAATGGGGCGGCGATTGAGCGAGATTTCTTCCTCTTACCAGCGAGTTTTCCCACAGGACGAAAGAGAAGCGGCAATTTTGCTCATGACCCTATCTTATGGCCTTCTTCATGCCTTCTATTCGACGAATCAATCGCCGGTTGTGCTTGAAATGGCGAGCTATCTATGGAGGAAGTACGCCGATTATCTCTACACCAAGTGGGAAAGAACGATTCTATGGGACATGGTTGATCCGTATAGGCGACCTAAATCGTTTACGCCTTTGGTTACCATCTATATTGCTGCCTTTTACACTGGAGTCGTCGGCGCTGCCATTACCGAGCAGCTCTACAAGGAAAAGTATTGGGAAGATCACCCTGGGGAAGATGTACCTCTAATGAAACCAAAGTTTTATTATGGACCCTGGAGAGTAATGAGGGGTGAAGTCCCTGCACACACCAAGTGA

Coding sequence (CDS)

ATGGCTCCGCCTTATCACGACGACCTTCTCCGCCGTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTCTCTTTCCCTGCCCCCGATCACTCCAACTCCGACGACCCTCGCCGGCTGCAGCTCAAACACGAGAGTGAAAGCTCAAGCTGCTGTGAGAATCATAATACTCATAATGATTTGGTCAACTGGTCTTCTTCTTCTTCTAAGATTAGATTGCTGATAAATTCTAACCAAATCAACACCGCCACCCAGATGATCCACGGCGGTCGGAACTCCCATGATCTTAACCGGACAACCATGCTAAACGACGGCGCCGCCATAATCAGAACTTGTTCCGACTGTAACACCACAAAAACTCCCCTTTGGAGGAGCGGCCCAAGAGGCCCTAAGTCTCTTTGCAACGCCTGTGGAATCCGGCAGAGAAAAGCAAGACGAGCGATGGCGGAAGCGGCGGCAATGAACGGCGGTATTCCATGCGGCGGAAAATCGGCGGCAATAATTCTGAAGACGAACAAGGCGGTGCAACACAAGATAATGACAAAGCCGGCAGCGAAGAAATTGAAAAGGAAGCGGAAAGACGACGCCGTCGTAGCCGGCGGCGGCGGCGGCTGCGGCGGAAAGAAGGGTTGTTTTGAAAATATAAAAATGGGGCGGCGATTGAGCGAGATTTCTTCCTCTTACCAGCGAGTTTTCCCACAGGACGAAAGAGAAGCGGCAATTTTGCTCATGACCCTATCTTATGGCCTTCTTCATGCCTTCTATTCGACGAATCAATCGCCGGTTGTGCTTGAAATGGCGAGCTATCTATGGAGGAAGTACGCCGATTATCTCTACACCAAGTGGGAAAGAACGATTCTATGGGACATGGTTGATCCGTATAGGCGACCTAAATCGTTTACGCCTTTGGTTACCATCTATATTGCTGCCTTTTACACTGGAGTCGTCGGCGCTGCCATTACCGAGCAGCTCTACAAGGAAAAGTATTGGGAAGATCACCCTGGGGAAGATGTACCTCTAATGAAACCAAAGTTTTATTATGGACCCTGGAGAGTAATGAGGGGTGAAGTCCCTGCACACACCAAGTGA

Protein sequence

MAPPYHDDLLRRSSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENHNTHNDLVNWSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISSSYQRVFPQDEREAAILLMTLSYGLLHAFYSTNQSPVVLEMASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYKEKYWEDHPGEDVPLMKPKFYYGPWRVMRGEVPAHTK

Homology

[Close]

BLAST of CmoCh10G007400 vs. ExPASy Swiss-Prot
Match: Q94K18 (Uncharacterized protein At4g29660 OS=Arabidopsis thaliana OX=3702 GN=EMB2752 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.6e-37
Identity = 67/92 (72.83%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 268 SYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYKE 327
           S LWRKYADY Y K+ER  +W+M++PYRRPK+FT L+TIY+AAFYTGV+GAA+TEQLYKE
Sbjct: 6   SQLWRKYADYKYNKFERFAVWEMIEPYRRPKTFTTLITIYVAAFYTGVIGAAVTEQLYKE 65

Query: 328 KYWEDHPGEDVPLMKPKFYYGPWRVMRGEVPA 360
           K+WE+HPG+ VPLMKP FY GPWRV RGE  A
Sbjct: 66  KFWEEHPGKTVPLMKPVFYRGPWRVYRGEAIA 97

[Close]

BLAST of CmoCh10G007400 vs. ExPASy Swiss-Prot
Match: Q5HZ36 (GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 2.1e-24
Identity = 90/251 (35.86%), Postives = 121/251 (48.21%), Query Frame = 0


Query: 30  DHSNSDDPRRLQLKHESESSSCCENHNTHNDLVNWSSSSSKIRLLINSNQINTATQMIHG 89
           D +N+++ +       +  ++  E+H  H DL   +  + K       N+ NT  +  + 
Sbjct: 166 DQTNNNNHKESDHYPLNHKTNFDEDH--HEDLNFKNVLTRKTTAATTENRYNTINENGYS 225

Query: 90  GRNSHDLNRTTMLNDGAAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMA 149
             N               +IR CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRA  
Sbjct: 226 NNN--------------GVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAM 285

Query: 150 EAAAMNGGIPCGGKSAAIILKTNKAVQHKIMTK-------------PAAKKLKRKRKDD- 209
            AAA  G            L   K +Q+K                   AKK K K +++ 
Sbjct: 286 AAAAAAGDQEVAVAPRVQQLPLKKKLQNKKKRSNGGEKYNHSPPMVAKAKKCKIKEEEEK 345

Query: 210 ----AVVAG----------GGGGCGGKKGCFENIKMGRRLSEISSSYQRVFPQDEREAAI 253
                 VAG                  K CF+++ +   +   SS+YQ+VFPQDE+EAA+
Sbjct: 346 EMEAETVAGDSEISKSTTSSNSSISSNKFCFDDLTI---MLSKSSAYQQVFPQDEKEAAV 397

[Close]

BLAST of CmoCh10G007400 vs. ExPASy Swiss-Prot
Match: Q9SZI6 (Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.8e-23
Identity = 82/209 (39.23%), Postives = 113/209 (54.07%), Query Frame = 0


Query: 68  SSKIRLLINSNQINTATQMIHGGRN---SHDLNRTTMLN--DGAAIIRTCSDCNTTKTPL 127
           SSK+RL+     I T +       N   S +L+ +   N  +   +IR CSDCNTTKTPL
Sbjct: 152 SSKVRLMKKKKAIITTSDSSKQHTNNDQSSNLSNSERQNGYNNDCVIRICSDCNTTKTPL 211

Query: 128 WRSGPRGPKSLCNACGIRQRKARR---AMAEAAAMNGGIPCGGKS--------------- 187
           WRSGPRGPKSLCNACGIRQRKARR   A A A A++G  P   K                
Sbjct: 212 WRSGPRGPKSLCNACGIRQRKARRAAMATATATAVSGVSPPVMKKKMQNKNKISNGVYKI 271

Query: 188 -AAIILKTNKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSE 247
            + + LK N   +   + + A  +    + +  +++            F+++ +   L  
Sbjct: 272 LSPLPLKVNTCKRMITLEETALAEDLETQSNSTMLS------SSDNIYFDDLAL---LLS 331

Query: 248 ISSSYQRVFPQDEREAAILLMTLSYGLLH 253
            SS+YQ+VFPQDE+EAAILLM LS+G++H
Sbjct: 332 KSSAYQQVFPQDEKEAAILLMALSHGMVH 351

[Close]

BLAST of CmoCh10G007400 vs. ExPASy Swiss-Prot
Match: Q6YW48 (Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CGA1 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.3e-20
Identity = 75/205 (36.59%), Postives = 91/205 (44.39%), Query Frame = 0


Query: 93  SHDLNRTTMLNDGAAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAA 152
           +H       L     ++R CSDCNTTKTPLWRSGP GPKSLCNACGIRQRKARRAM  AA
Sbjct: 159 AHQDESQQQLQQALGVVRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARRAM--AA 218

Query: 153 AMNGGIPCGGKSAAIILKTNKAVQHKIMTKPAAKKLKR---------------------- 212
           A NGG        A +          +  KPAAKK KR                      
Sbjct: 219 AANGG--------AAVAPAKSVAAAPVNNKPAAKKEKRAADVDRSLPFKKRCKMVDHVAA 278

Query: 213 ------------------KRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISSSYQRVF 254
                             K +D  +V GG             I      +  +++    F
Sbjct: 279 AVAATKPTAAGEVVAAAPKDQDHVIVVGGENAAATSMPAQNPISKAAATAAAAAASPAFF 338

[Close]

BLAST of CmoCh10G007400 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.4e-11
Identity = 62/187 (33.16%), Postives = 83/187 (44.39%), Query Frame = 0


Query: 68  SSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTKTPLWRSGP 127
           S K+ L+ +      A  MI            T +ND     +TC+DC T+KTPLWR GP
Sbjct: 5   SEKVLLVDSETMKTRAEDMIE--------QNNTSVNDKK---KTCADCGTSKTPLWRGGP 64

Query: 128 RGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKIMTKPAAKK 187
            GPKSLCNACGIR RK RR   E                                   KK
Sbjct: 65  VGPKSLCNACGIRNRKKRRGGTE---------------------------------DNKK 124

Query: 188 LKRKRKDDAVVAGGGGGCGGKKGCFENIKMG-RRLSEISSSYQRVFPQDEREAAILLMTL 247
           LK+        +GGG    G+      + +G R+ S +    Q++   +E +AA+LLM L
Sbjct: 125 LKKSS------SGGGNRKFGESLKQSLMDLGIRKRSTVEKQRQKL--GEEEQAAVLLMAL 139

Query: 248 SYGLLHA 254
           SYG ++A
Sbjct: 185 SYGSVYA 139

[Close]

BLAST of CmoCh10G007400 vs. ExPASy TrEMBL
Match: A0A6J1HCZ1 (GATA transcription factor 21-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461705 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 2.3e-135
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENHNTHND 60
           MAPPYHDDLLRRSSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENHNTHND
Sbjct: 1   MAPPYHDDLLRRSSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENHNTHND 60

Query: 61  LVNWSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTKT 120
           LVNWSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTKT
Sbjct: 61  LVNWSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTKT 120

Query: 121 PLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKIM 180
           PLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKIM
Sbjct: 121 PLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKIM 180

Query: 181 TKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISSSYQRVFPQDEREAA 240
           TKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISSSYQRVFPQDEREAA
Sbjct: 181 TKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISSSYQRVFPQDEREAA 240

Query: 241 ILLMTLSYGLLH 253
           ILLMTLSYGLLH
Sbjct: 241 ILLMTLSYGLLH 252

[Close]

BLAST of CmoCh10G007400 vs. ExPASy TrEMBL
Match: A0A6J1JKI4 (GATA transcription factor 21 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111485245 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 3.3e-126
Identity = 241/252 (95.63%), Postives = 246/252 (97.62%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENHNTHND 60
           MAPPYHDDLLRRSSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENHNTHND
Sbjct: 31  MAPPYHDDLLRRSSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENHNTHND 90

Query: 61  LVNWSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTKT 120
           LVNW SSSSKIRLLINSNQINTATQMI G RNSHDLNRTTMLNDGAAIIRTCS+CNTTKT
Sbjct: 91  LVNW-SSSSKIRLLINSNQINTATQMIDGARNSHDLNRTTMLNDGAAIIRTCSECNTTKT 150

Query: 121 PLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKIM 180
           PLWRSGPRGPKSLCNACGIRQRKARRAMAEAAA+NGG+PCGGKSAAIILKTNKAVQHKIM
Sbjct: 151 PLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAVNGGVPCGGKSAAIILKTNKAVQHKIM 210

Query: 181 TKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISSSYQRVFPQDEREAA 240
           TKPAAKKLKRKRKDD VVA GGGG GGKKGCFE+IK+GRRLSEISSSYQRVFPQDEREAA
Sbjct: 211 TKPAAKKLKRKRKDDVVVAAGGGG-GGKKGCFEDIKIGRRLSEISSSYQRVFPQDEREAA 270

Query: 241 ILLMTLSYGLLH 253
           ILLMTLSYGLLH
Sbjct: 271 ILLMTLSYGLLH 280

[Close]

BLAST of CmoCh10G007400 vs. ExPASy TrEMBL
Match: A0A6J1JBE0 (GATA transcription factor 21 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485245 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 1.2e-123
Identity = 239/253 (94.47%), Postives = 244/253 (96.44%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSSS-SSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENHNTHN 60
           MAPPYHDDLLRRSSS   SSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENHNTHN
Sbjct: 31  MAPPYHDDLLRRSSSHHLSSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENHNTHN 90

Query: 61  DLVNWSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTK 120
           DLVNW SSSSKIRLLINSNQINTATQMI G RNSHDLNRTTMLNDGAAIIRTCS+CNTTK
Sbjct: 91  DLVNW-SSSSKIRLLINSNQINTATQMIDGARNSHDLNRTTMLNDGAAIIRTCSECNTTK 150

Query: 121 TPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKI 180
           TPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAA+NGG+PCGGKSAAIILKTNKAVQHKI
Sbjct: 151 TPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAVNGGVPCGGKSAAIILKTNKAVQHKI 210

Query: 181 MTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISSSYQRVFPQDEREA 240
           MTKPAAKKLKRKRKDD VVA GGGG GGKKGCFE+IK+GRRLSEISSSYQRVFPQDEREA
Sbjct: 211 MTKPAAKKLKRKRKDDVVVAAGGGG-GGKKGCFEDIKIGRRLSEISSSYQRVFPQDEREA 270

Query: 241 AILLMTLSYGLLH 253
           AILLMTLSYGLLH
Sbjct: 271 AILLMTLSYGLLH 281

[Close]

BLAST of CmoCh10G007400 vs. ExPASy TrEMBL
Match: A0A6J1JFE1 (GATA transcription factor 21 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485245 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.6e-123
Identity = 241/266 (90.60%), Postives = 246/266 (92.48%), Query Frame = 0


Query: 1   MAPPYHDDLLRR--------------SSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHES 60
           MAPPYHDDLLRR              SSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHES
Sbjct: 31  MAPPYHDDLLRRSSSHHLFFPTTTATSSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHES 90

Query: 61  ESSSCCENHNTHNDLVNWSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGA 120
           ESSSCCENHNTHNDLVNW SSSSKIRLLINSNQINTATQMI G RNSHDLNRTTMLNDGA
Sbjct: 91  ESSSCCENHNTHNDLVNW-SSSSKIRLLINSNQINTATQMIDGARNSHDLNRTTMLNDGA 150

Query: 121 AIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAA 180
           AIIRTCS+CNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAA+NGG+PCGGKSAA
Sbjct: 151 AIIRTCSECNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAVNGGVPCGGKSAA 210

Query: 181 IILKTNKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISS 240
           IILKTNKAVQHKIMTKPAAKKLKRKRKDD VVA GGGG GGKKGCFE+IK+GRRLSEISS
Sbjct: 211 IILKTNKAVQHKIMTKPAAKKLKRKRKDDVVVAAGGGG-GGKKGCFEDIKIGRRLSEISS 270

Query: 241 SYQRVFPQDEREAAILLMTLSYGLLH 253
           SYQRVFPQDEREAAILLMTLSYGLLH
Sbjct: 271 SYQRVFPQDEREAAILLMTLSYGLLH 294

[Close]

BLAST of CmoCh10G007400 vs. ExPASy TrEMBL
Match: A0A6J1H9D5 (GATA transcription factor 21-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111461705 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 2.4e-116
Identity = 227/252 (90.08%), Postives = 227/252 (90.08%), Query Frame = 0


Query: 1   MAPPYHDDLLRRSSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHESESSSCCENHNTHND 60
           MAPPYHDDLLRRSSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHE               
Sbjct: 1   MAPPYHDDLLRRSSSSSSSSSSSLSFPAPDHSNSDDPRRLQLKHE--------------- 60

Query: 61  LVNWSSSSSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTKT 120
                     IRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTKT
Sbjct: 61  ----------IRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTKT 120

Query: 121 PLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKIM 180
           PLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKIM
Sbjct: 121 PLWRSGPRGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKIM 180

Query: 181 TKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISSSYQRVFPQDEREAA 240
           TKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISSSYQRVFPQDEREAA
Sbjct: 181 TKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSEISSSYQRVFPQDEREAA 227

Query: 241 ILLMTLSYGLLH 253
           ILLMTLSYGLLH
Sbjct: 241 ILLMTLSYGLLH 227

[Close]

BLAST of CmoCh10G007400 vs. TAIR 10
Match: AT4G29660.1 (embryo defective 2752 )

HSP 1 Score: 157.1 bits (396), Expect = 2.6e-38
Identity = 67/92 (72.83%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 268 SYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYKE 327
           S LWRKYADY Y K+ER  +W+M++PYRRPK+FT L+TIY+AAFYTGV+GAA+TEQLYKE
Sbjct: 6   SQLWRKYADYKYNKFERFAVWEMIEPYRRPKTFTTLITIYVAAFYTGVIGAAVTEQLYKE 65

Query: 328 KYWEDHPGEDVPLMKPKFYYGPWRVMRGEVPA 360
           K+WE+HPG+ VPLMKP FY GPWRV RGE  A
Sbjct: 66  KFWEEHPGKTVPLMKPVFYRGPWRVYRGEAIA 97

[Close]

BLAST of CmoCh10G007400 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-25
Identity = 90/251 (35.86%), Postives = 121/251 (48.21%), Query Frame = 0


Query: 30  DHSNSDDPRRLQLKHESESSSCCENHNTHNDLVNWSSSSSKIRLLINSNQINTATQMIHG 89
           D +N+++ +       +  ++  E+H  H DL   +  + K       N+ NT  +  + 
Sbjct: 166 DQTNNNNHKESDHYPLNHKTNFDEDH--HEDLNFKNVLTRKTTAATTENRYNTINENGYS 225

Query: 90  GRNSHDLNRTTMLNDGAAIIRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMA 149
             N               +IR CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRA  
Sbjct: 226 NNN--------------GVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAM 285

Query: 150 EAAAMNGGIPCGGKSAAIILKTNKAVQHKIMTK-------------PAAKKLKRKRKDD- 209
            AAA  G            L   K +Q+K                   AKK K K +++ 
Sbjct: 286 AAAAAAGDQEVAVAPRVQQLPLKKKLQNKKKRSNGGEKYNHSPPMVAKAKKCKIKEEEEK 345

Query: 210 ----AVVAG----------GGGGCGGKKGCFENIKMGRRLSEISSSYQRVFPQDEREAAI 253
                 VAG                  K CF+++ +   +   SS+YQ+VFPQDE+EAA+
Sbjct: 346 EMEAETVAGDSEISKSTTSSNSSISSNKFCFDDLTI---MLSKSSAYQQVFPQDEKEAAV 397

[Close]

BLAST of CmoCh10G007400 vs. TAIR 10
Match: AT4G26150.1 (cytokinin-responsive gata factor 1 )

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-24
Identity = 82/209 (39.23%), Postives = 113/209 (54.07%), Query Frame = 0


Query: 68  SSKIRLLINSNQINTATQMIHGGRN---SHDLNRTTMLN--DGAAIIRTCSDCNTTKTPL 127
           SSK+RL+     I T +       N   S +L+ +   N  +   +IR CSDCNTTKTPL
Sbjct: 152 SSKVRLMKKKKAIITTSDSSKQHTNNDQSSNLSNSERQNGYNNDCVIRICSDCNTTKTPL 211

Query: 128 WRSGPRGPKSLCNACGIRQRKARR---AMAEAAAMNGGIPCGGKS--------------- 187
           WRSGPRGPKSLCNACGIRQRKARR   A A A A++G  P   K                
Sbjct: 212 WRSGPRGPKSLCNACGIRQRKARRAAMATATATAVSGVSPPVMKKKMQNKNKISNGVYKI 271

Query: 188 -AAIILKTNKAVQHKIMTKPAAKKLKRKRKDDAVVAGGGGGCGGKKGCFENIKMGRRLSE 247
            + + LK N   +   + + A  +    + +  +++            F+++ +   L  
Sbjct: 272 LSPLPLKVNTCKRMITLEETALAEDLETQSNSTMLS------SSDNIYFDDLAL---LLS 331

Query: 248 ISSSYQRVFPQDEREAAILLMTLSYGLLH 253
            SS+YQ+VFPQDE+EAAILLM LS+G++H
Sbjct: 332 KSSAYQQVFPQDEKEAAILLMALSHGMVH 351

[Close]

BLAST of CmoCh10G007400 vs. TAIR 10
Match: AT5G26930.1 (GATA transcription factor 23 )

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-12
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 109 IRTCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRA 148
           IR CS+C TTKTP+WR GP GPKSLCNACGIR RK RR+
Sbjct: 25  IRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRS 63

[Close]

BLAST of CmoCh10G007400 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 )

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-12
Identity = 62/187 (33.16%), Postives = 83/187 (44.39%), Query Frame = 0


Query: 68  SSKIRLLINSNQINTATQMIHGGRNSHDLNRTTMLNDGAAIIRTCSDCNTTKTPLWRSGP 127
           S K+ L+ +      A  MI            T +ND     +TC+DC T+KTPLWR GP
Sbjct: 5   SEKVLLVDSETMKTRAEDMIE--------QNNTSVNDKK---KTCADCGTSKTPLWRGGP 64

Query: 128 RGPKSLCNACGIRQRKARRAMAEAAAMNGGIPCGGKSAAIILKTNKAVQHKIMTKPAAKK 187
            GPKSLCNACGIR RK RR   E                                   KK
Sbjct: 65  VGPKSLCNACGIRNRKKRRGGTE---------------------------------DNKK 124

Query: 188 LKRKRKDDAVVAGGGGGCGGKKGCFENIKMG-RRLSEISSSYQRVFPQDEREAAILLMTL 247
           LK+        +GGG    G+      + +G R+ S +    Q++   +E +AA+LLM L
Sbjct: 125 LKKSS------SGGGNRKFGESLKQSLMDLGIRKRSTVEKQRQKL--GEEEQAAVLLMAL 139

Query: 248 SYGLLHA 254
           SYG ++A
Sbjct: 185 SYGSVYA 139

The following BLAST results are available for this feature:

BLAST of CmoCh10G007400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94K18	3.6e-37	72.83	Uncharacterized protein At4g29660 OS=Arabidopsis thaliana OX=3702 GN=EMB2752 PE=...	[more]
Q5HZ36	2.1e-24	35.86	GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2	[more]
Q9SZI6	1.8e-23	39.23	Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 ...	[more]
Q6YW48	5.3e-20	36.59	Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. ...	[more]
Q9FJ10	3.4e-11	33.16	GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1	[more]

BLAST of CmoCh10G007400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCZ1	2.3e-135	100.00	GATA transcription factor 21-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1JKI4	3.3e-126	95.63	GATA transcription factor 21 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111485...	[more]
A0A6J1JBE0	1.2e-123	94.47	GATA transcription factor 21 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485...	[more]
A0A6J1JFE1	2.6e-123	90.60	GATA transcription factor 21 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485...	[more]
A0A6J1H9D5	2.4e-116	90.08	GATA transcription factor 21-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of CmoCh10G007400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29660.1	2.6e-38	72.83	embryo defective 2752	[more]
AT5G56860.1	1.5e-25	35.86	GATA type zinc finger transcription factor family protein	[more]
AT4G26150.1	1.2e-24	39.23	cytokinin-responsive gata factor 1	[more]
AT5G26930.1	1.4e-12	76.92	GATA transcription factor 23	[more]
AT5G49300.1	2.4e-12	33.16	GATA transcription factor 16	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 106..158 e-value: 6.8E-20 score: 82.1
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 112..145 e-value: 6.1E-17 score: 60.9
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 112..137
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 110..142 score: 12.650496
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 111..143 e-value: 3.15159E-14 score: 64.7014
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 108..151 e-value: 6.4E-15 score: 56.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..51
None	No IPR available	PANTHER	PTHR47255	GATA TRANSCRIPTION FACTOR 22-RELATED	coord: 14..252
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 108..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G007400.1	CmoCh10G007400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding