CmoCh10G006630 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh10G006630
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionprotein LIKE COV 1-like
LocationCmo_Chr10: 3041600 .. 3046067 (-)
RNA-Seq ExpressionCmoCh10G006630
SyntenyCmoCh10G006630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACTTCAAAGGGTTGCCTTGTTGCCGGTCTACTGTCTTCGGGGCGAAGGTTTTTAAGCTGCAGAACGCTGTGGCTGGGCTTTCCAATAGGGGCTGCCGTTAATGGCCGACGAAAAAGCGGCGATTGCGATCGCCAGCAGAGATAGAGAGCGAGATCTACAGCTTCTAATTCCCGTTGCCGGCTCGCCAAATGACGTTGCTGCCTCTTGTAAGCCCTCATCCTCTTCATCGTCCTCGCAGCAGACTGGACGCGAGGTATTCTTTACTTCTTTTCAATTCATTTTTTTACCTCCTGATCGTTGGAAGCTAGTCAGTGGTGTTGCTTGTTGTTATATTGAAATTTCTGTGTGTCGCAGTCGATTTTAGGTTCGGTTTGTTTTTGTGTTAATCAGTTCAATCGTGGCAGTCGCCTTCCTCCTCCTCTTCTTCTATTTTTCTGTTTCTTCTCGTTCTTGTGTTGCTTGGTGGACTGCTTTTGTCATGGTTGGAGCACGAGTTCATCCTTATGTACTTTAATTATTCACTCTACCATATTTTATACGTTAGAAGTTTTACGCTTTTGGAATTATCAATGTGTTTCTCCACTGTAGGGTTCAATTGATCCAATCGATATTTCTGAATTGTGGCCCTTAGAGATTATGTTTCAGATGCCTTGTGGTCGCTCTTGTATGATTCATAAAAAGGCATTCCTCCAAGAGTTTGATAGCTTAACAATTCTTTTCGATTTTGAAAAATTACTGATGGAATACTTACAACTGCTTCCTCTCAAAAGAAAAAAAAAAAACAAAATGATGGGAGTATTTACTTCAGTACGGATGTTAAAAACTCACATCTTTTAAATGTCTAGTTCACTCTATGAAGTTATTAATACTATAGTTGGAATAGCTATGGATGTGTACTACACCAACTTAATTAGCTGAGGGAGAATGTTGAAATCTTTTCTTTTTATGCATCAAGCTTATTTTAGTCATTCTGTCATTTAAAATTGGAATAGCCAGTTACTTGTTATTCAAATTTTCTATCCGGGGTTCAAATATCTATTTTTTCTCCTGTGCAGACATTTTACAGAGTCTTTAGGAGCTGGGCCTCAAAAAAGTTCATGACCGGATGGTTTGTTATTTATTCTTTTCTTTGTAGTTAATTTTATTCAATGTTTTTGATGCTAAGAAAACATGGCATATAAACTAAAATTGCACTTTCAGCCTGCTGTTTGAAAACTGCACTTGAAATTTTGTTCTATTTATATAATGGAATAGAGTTGTTATTTCCCTCAGTAAGTATGTTGAGCAGGGTAATAGGTTTTGAATTGGAAATAAATATTTATTTGTTTGCAACTTGCCAGCATTTCCAATTACAGTTGTTTGTCATTGTGCTTACTGCTGAGTGATAAGTGATAATAGTGTTTTAATACCTTAACGAGTTACCATCTGCCTATTTTGCAGTGTCATTCTATTTCCTATTGCAATAACTTTCTATATAACGTGGTGGTTTATTCACTTTGTGGATGGATTTTTTTCTCCGATCTATGCAAAACTTGGAATTAATATCTTTGGTAAGCAATCTTTATCACTGAACACTTCGTCTCAGCCCATTCAGTCCATGTGCAATTTGTTTCATATGCATTTTATACTACCTACATGAGTGATCATCGTTATTTACCTCCATCAATATCTGTTTTCTTTTTGCTGCTCATATGCAGATAGGAAATATCGAAAATAATTATGTAAATGCTTATATTGCCAGATGATTAATGAGTGTTCGTTCATTGCGAAAACCTGTTAAATTGTAAATTTCAAAGTTTCTTATCATTAGCTTATTCTCATTTCTTGAATAGGTCTTGGATTTGCAACATCTGTATCGTTCATCTTCCTTGTTGGGGTGTTCATGTCATCATGGTTGGGTGCTTCTGTTTTGGCTCTTGGAGAGTGGTTCATCAAGCGCATGCCATTTGTTCGTCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGGTACATCTTTCGTAAGTGTATTTATTTAACTTGGTCAGGTTTATATATGAACCATCTATAATCTCGTCATTTTCTGTTAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCCATCATTAGGCACCCTCGTATTGGTGAATATGCATTTGGGTTCATTACTTCAACTGTCACTCTCCAGGTATGTTATTTTTGCTTCAATTTCTTTCATTACATTCTGCCTAACCCTAGGAGATAGTTTGGGGTCACCTTCTAGACTTGTTGACATCTCGATATTTGTTGGTCATTTAATCCCTAGGAGATAGTTTGGGGTCACCTTCTAGACTTGTTGACATCTCGATATTTGTTGGTCATTTAATAAATCTCATTGGTCATTGTATCGCTTATGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCACACACACAATACAAAGTTGATTTAAAAATAAATNACCCTAGGAGATAGTTTGGGGTCACCTTCTAGACTTGTTGACATCTCGATATTTGTTGGTCATTTAATAAATCTCATTGGTCATTGTATCGCTTATGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCACACACACAATACAAAGTTGATTTAAAAATAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCACACACACAATACAAAGTTGATTTAAAAATAAATGTTTGATTTTCTTATTGGAGCATATAATTGCATTTACATTTTTATATTTCTTGATAAACATGACTGGTTTGATTTATATTTAGCTGGTTTTGGAACCTTCACGAACATTTGTTACATGACAGCCTAGCATTACATATATGTAACTGATTTCTACTTTGCGTTGGTTTCATATTGTGGGATATCTTCTTGCACGTAGTATTTTTACTGTAAATGTTATAATTTGAAATGTAAACTTGGTTCATGAAAACAACCAACTTCAACCTATAATACCCTTATCACTTATCACACATGGATCCACATGCTTATTTCGAACATGAAAATCATTGACATTGTGGGTATAGCAATATGTTTTATCGAATAATTTATGTATTCATATCTAATTTTGTAGAAATGATATTTCGTTATTATATCTCTGATCATGCTTTTTATACATGCTTCTTAGCATTTTATTGATTTAAGGGTTTATTTTATTTTTATGGTTCTCGTGAATCTATCTTCAATTTTATATCTTAGATTCTTAGTTTTGGTTAAAAATTTATATTAATATTTTTTTCACCGTTTTTAAAATTGTATGAATGTGGATGGGCTGCTAACCATCCGTGGGCAGCCCAAACCAGTGTTTTTAAAGCGTGAGGTACCAAAAAAATGGGTGTTTTTTTTTTATGAGTTGTCCAATTGAAGAATGAAAGTAAATCAATAAGAAGGTAATGAAAAGTTCAAGAAAATTGGAGATTGCGGAGGAAATTGAACGTTTTCCGAGAATATTTCTTAATTTCTTCCTACAACTTTAAAAATGAAAAAAATGGCCTTCATTTGGCGGCAAGATGAGCTTTTCAGATCAGTGGCCTTAGGTGAGGATTAAGTTGCCAAATACTACTTTGTGAACTGTTTTCTTTTTATTTTTGGGTAACTTAATTATGTTCTTAGTCATGTTGCACCTTTTTCAACTGCCATAACCTGTAATGCACAGGTGCTGCGAAGTTTTATATACTGATCAACCCCCCACTCTAAATGCAGAGTTATTCTGGAGAGGAGGAGCTGTGTTGTGTGTACGTTCCCACCAATCATCTTTATATCGGTGATGTTTTCCTAGTCAACTCTCAGGATGTTATTAGACCAAATTTATCAGTTCGGGAGGGAATCGGTGAGTTCTTCTGTTTATGTCATTATCTAGTTTGACCTGAATTTCAAATGAACTAAAAGCCCCCAATTTCAACCCCCTCACACACACACACAAGTAATAATTTAGGAAATTCAAGGGTTGATCAGGAATTATCTTTCTATCTAAGAGGACATGACTTGTAGCTTTCTAAGAGTAGAAAGGAAATTAATTATTTAAATTGCAGAAATCGTCGTGTCTGGAGGCATGTCGATGCCACAGATACTATCCATACTGGATTCAGATATCCGGCCAATTGATGGTAGAAGACTGACTAGAAGCTGAGACCGAAGATGTAGAAATGCTGGCTGCTAATCAATATACGGTTTTGGGGATGACAATTTAGTTGCTCTGCCTGGCTGGGCATCAAAACCTTTAGTCGGCAAAGCATAACTTATAATAGAAATTTGTCTGGTAGTTGAAATTTAATGTCATAAAATAGTTGTTGATCCAGTATAGTAGGAAATGGATGTGCATTAGAACTTCTCTTCATTCTAATTCAATCGAGAGTGTTTACTTTCTTCTTCTTGGTGAGTCACATAGTTCTGTTGCGTCAGATGTATATTTGAGACTGTACATATTTTGCAGTGATATATCGATGCACTATGAAACACGTCA

mRNA sequence

GACTTCAAAGGGTTGCCTTGTTGCCGGTCTACTGTCTTCGGGGCGAAGGTTTTTAAGCTGCAGAACGCTGTGGCTGGGCTTTCCAATAGGGGCTGCCGTTAATGGCCGACGAAAAAGCGGCGATTGCGATCGCCAGCAGAGATAGAGAGCGAGATCTACAGCTTCTAATTCCCGTTGCCGGCTCGCCAAATGACGTTGCTGCCTCTTGTAAGCCCTCATCCTCTTCATCGTCCTCGCAGCAGACTGGACGCGAGACATTTTACAGAGTCTTTAGGAGCTGGGCCTCAAAAAAGTTCATGACCGGATGTGTCATTCTATTTCCTATTGCAATAACTTTCTATATAACGTGGTGGTTTATTCACTTTGTGGATGGATTTTTTTCTCCGATCTATGCAAAACTTGGAATTAATATCTTTGGTCTTGGATTTGCAACATCTGTATCGTTCATCTTCCTTGTTGGGGTGTTCATGTCATCATGGTTGGGTGCTTCTGTTTTGGCTCTTGGAGAGTGGTTCATCAAGCGCATGCCATTTGTTCGTCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCCATCATTAGGCACCCTCGTATTGGTGAATATGCATTTGGGTTCATTACTTCAACTGTCACTCTCCAGAGTTATTCTGGAGAGGAGGAGCTGTGTTGTGTGTACGTTCCCACCAATCATCTTTATATCGGTGATGTTTTCCTAGTCAACTCTCAGGATGTTATTAGACCAAATTTATCAGTTCGGGAGGGAATCGAAATCGTCGTGTCTGGAGGCATGTCGATGCCACAGATACTATCCATACTGGATTCAGATATCCGGCCAATTGATGGTAGAAGACTGACTAGAAGCTGAGACCGAAGATGTAGAAATGCTGGCTGCTAATCAATATACGGTTTTGGGGATGACAATTTAGTTGCTCTGCCTGGCTGGGCATCAAAACCTTTAGTCGGCAAAGCATAACTTATAATAGAAATTTGTCTGGTAGTTGAAATTTAATGTCATAAAATAGTTGTTGATCCAGTATAGTAGGAAATGGATGTGCATTAGAACTTCTCTTCATTCTAATTCAATCGAGAGTGTTTACTTTCTTCTTCTTGGTGAGTCACATAGTTCTGTTGCGTCAGATGTATATTTGAGACTGTACATATTTTGCAGTGATATATCGATGCACTATGAAACACGTCA

Coding sequence (CDS)

ATGGCCGACGAAAAAGCGGCGATTGCGATCGCCAGCAGAGATAGAGAGCGAGATCTACAGCTTCTAATTCCCGTTGCCGGCTCGCCAAATGACGTTGCTGCCTCTTGTAAGCCCTCATCCTCTTCATCGTCCTCGCAGCAGACTGGACGCGAGACATTTTACAGAGTCTTTAGGAGCTGGGCCTCAAAAAAGTTCATGACCGGATGTGTCATTCTATTTCCTATTGCAATAACTTTCTATATAACGTGGTGGTTTATTCACTTTGTGGATGGATTTTTTTCTCCGATCTATGCAAAACTTGGAATTAATATCTTTGGTCTTGGATTTGCAACATCTGTATCGTTCATCTTCCTTGTTGGGGTGTTCATGTCATCATGGTTGGGTGCTTCTGTTTTGGCTCTTGGAGAGTGGTTCATCAAGCGCATGCCATTTGTTCGTCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCCATCATTAGGCACCCTCGTATTGGTGAATATGCATTTGGGTTCATTACTTCAACTGTCACTCTCCAGAGTTATTCTGGAGAGGAGGAGCTGTGTTGTGTGTACGTTCCCACCAATCATCTTTATATCGGTGATGTTTTCCTAGTCAACTCTCAGGATGTTATTAGACCAAATTTATCAGTTCGGGAGGGAATCGAAATCGTCGTGTCTGGAGGCATGTCGATGCCACAGATACTATCCATACTGGATTCAGATATCCGGCCAATTGATGGTAGAAGACTGACTAGAAGCTGA

Protein sequence

MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVVSGGMSMPQILSILDSDIRPIDGRRLTRS
Homology
BLAST of CmoCh10G006630 vs. ExPASy Swiss-Prot
Match: F4IUE7 (Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 SV=2)

HSP 1 Score: 400.2 bits (1027), Expect = 1.8e-110
Identity = 209/265 (78.87%), Postives = 225/265 (84.91%), Query Frame = 0

Query: 1   MADEKAAIAIASRDRERDLQLLIPVAGS-PNDVAASCKPSSS---SSSSQQTGRETFYRV 60
           M DEK  I +A  +RERD +LLIPVA S   D  +S KPSSS   SSSS Q+  ET    
Sbjct: 1   MGDEKPVIVMA--NRERDRELLIPVADSGDKDDGSSSKPSSSSSASSSSHQSSHETLSLF 60

Query: 61  FRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFI 120
            R WASKKFMTGCVIL PIAITFYITWWFIHFVDGFFSPIYA+LGIN+FG GF TS++FI
Sbjct: 61  IRGWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFI 120

Query: 121 FLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRH 180
           FLVGVFMSSWLGASVL LGEWFIKRMPFVRHIYNASKQIS+AISPDQNT+AFKEVAIIRH
Sbjct: 121 FLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRH 180

Query: 181 PRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGI 240
           PR+GEYAFGFITSTV LQ+Y  EEELCCVYVPTNHLYIGD+ LVNS DVIRPNLSVREGI
Sbjct: 181 PRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGI 240

Query: 241 EIVVSGGMSMPQILSILDSDIRPID 262
           EIVVSGGMSMPQILS +D  +  ID
Sbjct: 241 EIVVSGGMSMPQILSTVDKPLASID 263

BLAST of CmoCh10G006630 vs. ExPASy Swiss-Prot
Match: Q8VY49 (Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 6.5e-108
Identity = 202/250 (80.80%), Postives = 215/250 (86.00%), Query Frame = 0

Query: 14  DRERDLQLLIPVAG-SPNDVAASCKPSSSS--SSSQQTGRETFYRVFRSWASKKFMTGCV 73
           +RERD +LLIPVA     D  +S KPSSSS  SSS Q+G ET     R WASKKFMTGCV
Sbjct: 3   NRERDRELLIPVADFGDKDDGSSSKPSSSSSASSSHQSGHETLSLFIRGWASKKFMTGCV 62

Query: 74  ILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVGVFMSSWLGAS 133
           IL PIA+TFY TWWFIHFVDGFFSPIYA LGINIFG GF TS++FIFLVGVFMSSWLGAS
Sbjct: 63  ILLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSWLGAS 122

Query: 134 VLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYAFGFITST 193
           VL LGEWFIKRMPFVRHIYNASKQIS+AISPDQNT+AFKEVAIIRHPR+GEYAFGFITST
Sbjct: 123 VLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITST 182

Query: 194 VTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVVSGGMSMPQIL 253
           V LQ+Y  EEELCCVYVPTNHLYIGD+ LVNS DVIRPNLSVREGIEIVVSGGMSMPQIL
Sbjct: 183 VVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQIL 242

Query: 254 SILDSDIRPI 261
           S LD  +  I
Sbjct: 243 STLDKPLASI 252

BLAST of CmoCh10G006630 vs. ExPASy Swiss-Prot
Match: F4IQJ6 (Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.9e-99
Identity = 177/245 (72.24%), Postives = 208/245 (84.90%), Query Frame = 0

Query: 15  RERDLQLLIPV---AGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSWASKKFMTGCVI 74
           RERDL+ LIP+     SP DV  S  PS  +S     G+E  Y+V RSWASKKFMTGCVI
Sbjct: 4   RERDLERLIPMHKSGASPRDVVLSVPPSPLASPIHVAGKEAIYKVIRSWASKKFMTGCVI 63

Query: 75  LFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVGVFMSSWLGASV 134
           L PIA+TFY TWWFIHFVDGFFSPIY  LGIN+FGLGF TS++FIF+VGVFMSSWLGASV
Sbjct: 64  LLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGFVTSITFIFMVGVFMSSWLGASV 123

Query: 135 LALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYAFGFITSTV 194
           L++GEWFIK+MP V +IY+ASKQIS AISPDQ++ AFKEVAIIRHP +GEYAFGFITSTV
Sbjct: 124 LSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRHPHMGEYAFGFITSTV 183

Query: 195 TLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVVSGGMSMPQILS 254
            L+  +G EELCCVYVPTNHLY+GD+FL++S+D+IRPNLSVREGIEIV+SGGMS+P +L+
Sbjct: 184 ILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLSVREGIEIVISGGMSIPHMLT 243

Query: 255 ILDSD 257
            LDS+
Sbjct: 244 TLDSE 248

BLAST of CmoCh10G006630 vs. ExPASy Swiss-Prot
Match: Q9C8C1 (Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.8e-87
Identity = 158/217 (72.81%), Postives = 186/217 (85.71%), Query Frame = 0

Query: 38  PSSSSSSSQQTGRETFYRVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIY 97
           P S  +S   + R+  Y V +SW SKKFMTG V+LFP+A+TF ITWWFI FVDGFFSPIY
Sbjct: 26  PKSPPNSPNSSTRKACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIY 85

Query: 98  AKLGINIFGLGFATSVSFIFLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISS 157
             LG++IFGLGF TSV F F VG+F SSWLG++V  LGE FI+RMPFV+HIY+ASKQIS+
Sbjct: 86  ENLGVDIFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQIST 145

Query: 158 AISPDQNTKAFKEVAIIRHPRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDV 217
           AISPDQNT AFKEVAIIRHPRIGEYAFGFITS+VTLQ+  GEEELC VYVPTNHLYIGDV
Sbjct: 146 AISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDV 205

Query: 218 FLVNSQDVIRPNLSVREGIEIVVSGGMSMPQILSILD 255
           FLV+S+++IRPNLS+REGIEI+VS GM+MPQ++S +D
Sbjct: 206 FLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVD 242

BLAST of CmoCh10G006630 vs. ExPASy TrEMBL
Match: A0A6J1H9X5 (protein LIKE COV 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461852 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 1.8e-145
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0

Query: 1   MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW 60
           MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW
Sbjct: 1   MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW 60

Query: 61  ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG 120
           ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG
Sbjct: 61  ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG 120

Query: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180
           VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG
Sbjct: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180

Query: 181 EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240
           EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV
Sbjct: 181 EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240

Query: 241 SGGMSMPQILSILDSDIRPIDGRRLTRS 269
           SGGMSMPQILSILDSDIRPIDGRRLTRS
Sbjct: 241 SGGMSMPQILSILDSDIRPIDGRRLTRS 268

BLAST of CmoCh10G006630 vs. ExPASy TrEMBL
Match: A0A6J1JFG6 (protein LIKE COV 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485261 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 8.5e-143
Identity = 264/268 (98.51%), Postives = 265/268 (98.88%), Query Frame = 0

Query: 1   MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW 60
           MADEKAAIAI+SRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW
Sbjct: 1   MADEKAAIAISSRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW 60

Query: 61  ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG 120
           ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG
Sbjct: 61  ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG 120

Query: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180
           VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG
Sbjct: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180

Query: 181 EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240
           EYAFGFITSTVTLQSYS EEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV
Sbjct: 181 EYAFGFITSTVTLQSYSEEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240

Query: 241 SGGMSMPQILSILDSDIRPIDGRRLTRS 269
           SGGMSMPQILSILDSDIRPID RR TRS
Sbjct: 241 SGGMSMPQILSILDSDIRPIDARRRTRS 268

BLAST of CmoCh10G006630 vs. ExPASy TrEMBL
Match: A0A1S3CI12 (protein LIKE COV 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.1e-137
Identity = 256/268 (95.52%), Postives = 262/268 (97.76%), Query Frame = 0

Query: 1   MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW 60
           MAD+KA IAIA+RDRERDL+LLIPVA SP D  ASCKPSSSSSSSQQTGRETFYRVFRSW
Sbjct: 1   MADDKAPIAIATRDRERDLELLIPVASSPKD-DASCKPSSSSSSSQQTGRETFYRVFRSW 60

Query: 61  ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG 120
           ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYA+LGI+IFGLGFATSV+FIFLVG
Sbjct: 61  ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFATSVTFIFLVG 120

Query: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180
           VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG
Sbjct: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180

Query: 181 EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240
           EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV
Sbjct: 181 EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240

Query: 241 SGGMSMPQILSILDSDIRPIDGRRLTRS 269
           SGGMSMPQILSILDSDIRPID RRLTRS
Sbjct: 241 SGGMSMPQILSILDSDIRPIDSRRLTRS 267

BLAST of CmoCh10G006630 vs. ExPASy TrEMBL
Match: A0A1S4E3W8 (protein LIKE COV 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.2e-135
Identity = 256/277 (92.42%), Postives = 262/277 (94.58%), Query Frame = 0

Query: 1   MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRE--------- 60
           MAD+KA IAIA+RDRERDL+LLIPVA SP D  ASCKPSSSSSSSQQTGRE         
Sbjct: 1   MADDKAPIAIATRDRERDLELLIPVASSPKD-DASCKPSSSSSSSQQTGREEFYVFGILK 60

Query: 61  TFYRVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFAT 120
           TFYRVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYA+LGI+IFGLGFAT
Sbjct: 61  TFYRVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFAT 120

Query: 121 SVSFIFLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEV 180
           SV+FIFLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEV
Sbjct: 121 SVTFIFLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEV 180

Query: 181 AIIRHPRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 240
           AIIRHPRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS
Sbjct: 181 AIIRHPRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 240

Query: 241 VREGIEIVVSGGMSMPQILSILDSDIRPIDGRRLTRS 269
           VREGIEIVVSGGMSMPQILSILDSDIRPID RRLTRS
Sbjct: 241 VREGIEIVVSGGMSMPQILSILDSDIRPIDSRRLTRS 276

BLAST of CmoCh10G006630 vs. ExPASy TrEMBL
Match: A0A6J1CUV2 (protein LIKE COV 1-like OS=Momordica charantia OX=3673 GN=LOC111014556 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 5.5e-134
Identity = 248/268 (92.54%), Postives = 258/268 (96.27%), Query Frame = 0

Query: 1   MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW 60
           MAD+KAAI +A RDRERDL+LLIPV GSPND  AS KPSSS SSSQQTGR+TFYRVFRSW
Sbjct: 1   MADDKAAIVMAGRDRERDLELLIPVTGSPND-EASAKPSSSLSSSQQTGRQTFYRVFRSW 60

Query: 61  ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG 120
           ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYA+LGI+IFGLGFATSV+FIFLVG
Sbjct: 61  ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFATSVTFIFLVG 120

Query: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180
           VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNT+AFKEVAIIRHPR+G
Sbjct: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTQAFKEVAIIRHPRVG 180

Query: 181 EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240
           EYAFGFITSTVTLQ+YSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV
Sbjct: 181 EYAFGFITSTVTLQNYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240

Query: 241 SGGMSMPQILSILDSDIRPIDGRRLTRS 269
           SGGMSMPQILSILDS  RPID RRLTRS
Sbjct: 241 SGGMSMPQILSILDSHARPIDSRRLTRS 267

BLAST of CmoCh10G006630 vs. TAIR 10
Match: AT2G20120.1 (Protein of unknown function (DUF502) )

HSP 1 Score: 399.4 bits (1025), Expect = 2.2e-111
Identity = 209/265 (78.87%), Postives = 225/265 (84.91%), Query Frame = 0

Query: 1   MADEKAAIAIASRDRERDLQLLIPVAGS-PNDVAASCKPSSS---SSSSQQTGRETFYRV 60
           M DEK  I +A  +RERD +LLIPVA S   D  +S KPSSS   SSSS Q+  ET    
Sbjct: 1   MGDEKPVIVMA--NRERDRELLIPVADSGDKDDGSSSKPSSSSSASSSSHQSSHETLSLF 60

Query: 61  FRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFI 120
            R WASKKFMTGCVIL PIAITFYITWWFIHFVDGFFSPIYA+LGIN+FG GF TS++FI
Sbjct: 61  IRGWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFI 120

Query: 121 FLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRH 180
           FLVGVFMSSWLGASVL LGEWFIKRMPFVRHIYNASKQIS+AISPDQNT+AFKEVAIIRH
Sbjct: 121 FLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRH 180

Query: 181 PRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGI 240
           PR+GEYAFGFITSTV LQ+Y  EEELCCVYVPTNHLYIGD+ LVNS DVIRPNLSVREGI
Sbjct: 181 PRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDLLLVNSNDVIRPNLSVREGI 240

Query: 241 EIVVSGGMSMPQILSILDSDIRPID 262
           EIVVSGGMSMPQILS +D  +  ID
Sbjct: 241 EIVVSGGMSMPQILSTVDKPLASID 263

BLAST of CmoCh10G006630 vs. TAIR 10
Match: AT2G20130.1 (like COV 1 )

HSP 1 Score: 391.7 bits (1005), Expect = 4.6e-109
Identity = 202/250 (80.80%), Postives = 215/250 (86.00%), Query Frame = 0

Query: 14  DRERDLQLLIPVAG-SPNDVAASCKPSSSS--SSSQQTGRETFYRVFRSWASKKFMTGCV 73
           +RERD +LLIPVA     D  +S KPSSSS  SSS Q+G ET     R WASKKFMTGCV
Sbjct: 3   NRERDRELLIPVADFGDKDDGSSSKPSSSSSASSSHQSGHETLSLFIRGWASKKFMTGCV 62

Query: 74  ILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVGVFMSSWLGAS 133
           IL PIA+TFY TWWFIHFVDGFFSPIYA LGINIFG GF TS++FIFLVGVFMSSWLGAS
Sbjct: 63  ILLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSWLGAS 122

Query: 134 VLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYAFGFITST 193
           VL LGEWFIKRMPFVRHIYNASKQIS+AISPDQNT+AFKEVAIIRHPR+GEYAFGFITST
Sbjct: 123 VLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITST 182

Query: 194 VTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVVSGGMSMPQIL 253
           V LQ+Y  EEELCCVYVPTNHLYIGD+ LVNS DVIRPNLSVREGIEIVVSGGMSMPQIL
Sbjct: 183 VVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQIL 242

Query: 254 SILDSDIRPI 261
           S LD  +  I
Sbjct: 243 STLDKPLASI 252

BLAST of CmoCh10G006630 vs. TAIR 10
Match: AT2G18460.1 (like COV 3 )

HSP 1 Score: 363.6 bits (932), Expect = 1.3e-100
Identity = 177/245 (72.24%), Postives = 208/245 (84.90%), Query Frame = 0

Query: 15  RERDLQLLIPV---AGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSWASKKFMTGCVI 74
           RERDL+ LIP+     SP DV  S  PS  +S     G+E  Y+V RSWASKKFMTGCVI
Sbjct: 4   RERDLERLIPMHKSGASPRDVVLSVPPSPLASPIHVAGKEAIYKVIRSWASKKFMTGCVI 63

Query: 75  LFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVGVFMSSWLGASV 134
           L PIA+TFY TWWFIHFVDGFFSPIY  LGIN+FGLGF TS++FIF+VGVFMSSWLGASV
Sbjct: 64  LLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGFVTSITFIFMVGVFMSSWLGASV 123

Query: 135 LALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYAFGFITSTV 194
           L++GEWFIK+MP V +IY+ASKQIS AISPDQ++ AFKEVAIIRHP +GEYAFGFITSTV
Sbjct: 124 LSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRHPHMGEYAFGFITSTV 183

Query: 195 TLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVVSGGMSMPQILS 254
            L+  +G EELCCVYVPTNHLY+GD+FL++S+D+IRPNLSVREGIEIV+SGGMS+P +L+
Sbjct: 184 ILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLSVREGIEIVISGGMSIPHMLT 243

Query: 255 ILDSD 257
            LDS+
Sbjct: 244 TLDSE 248

BLAST of CmoCh10G006630 vs. TAIR 10
Match: AT1G43130.1 (like COV 2 )

HSP 1 Score: 323.2 bits (827), Expect = 2.0e-88
Identity = 158/217 (72.81%), Postives = 186/217 (85.71%), Query Frame = 0

Query: 38  PSSSSSSSQQTGRETFYRVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIY 97
           P S  +S   + R+  Y V +SW SKKFMTG V+LFP+A+TF ITWWFI FVDGFFSPIY
Sbjct: 26  PKSPPNSPNSSTRKACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIY 85

Query: 98  AKLGINIFGLGFATSVSFIFLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISS 157
             LG++IFGLGF TSV F F VG+F SSWLG++V  LGE FI+RMPFV+HIY+ASKQIS+
Sbjct: 86  ENLGVDIFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQIST 145

Query: 158 AISPDQNTKAFKEVAIIRHPRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDV 217
           AISPDQNT AFKEVAIIRHPRIGEYAFGFITS+VTLQ+  GEEELC VYVPTNHLYIGDV
Sbjct: 146 AISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDV 205

Query: 218 FLVNSQDVIRPNLSVREGIEIVVSGGMSMPQILSILD 255
           FLV+S+++IRPNLS+REGIEI+VS GM+MPQ++S +D
Sbjct: 206 FLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVD 242

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
F4IUE71.8e-11078.87Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 ... [more]
Q8VY496.5e-10880.80Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1[more]
F4IQJ61.9e-9972.24Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1[more]
Q9C8C12.8e-8772.81Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1H9X51.8e-145100.00protein LIKE COV 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461852... [more]
A0A6J1JFG68.5e-14398.51protein LIKE COV 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485261 P... [more]
A0A1S3CI121.1e-13795.52protein LIKE COV 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 ... [more]
A0A1S4E3W82.2e-13592.42protein LIKE COV 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 ... [more]
A0A6J1CUV25.5e-13492.54protein LIKE COV 1-like OS=Momordica charantia OX=3673 GN=LOC111014556 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G20120.12.2e-11178.87Protein of unknown function (DUF502) [more]
AT2G20130.14.6e-10980.80like COV 1 [more]
AT2G18460.11.3e-10072.24like COV 3 [more]
AT1G43130.12.0e-8872.81like COV 2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007462Protein of unknown function DUF502PFAMPF04367DUF502coord: 112..211
e-value: 4.8E-29
score: 100.4
NoneNo IPR availablePANTHERPTHR31876COV-LIKE PROTEIN 1coord: 1..255
NoneNo IPR availablePANTHERPTHR31876:SF22BNAC07G03830D PROTEINcoord: 1..255

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G006630.1CmoCh10G006630.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane