Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACTTCAAAGGGTTGCCTTGTTGCCGGTCTACTGTCTTCGGGGCGAAGGTTTTTAAGCTGCAGAACGCTGTGGCTGGGCTTTCCAATAGGGGCTGCCGTTAATGGCCGACGAAAAAGCGGCGATTGCGATCGCCAGCAGAGATAGAGAGCGAGATCTACAGCTTCTAATTCCCGTTGCCGGCTCGCCAAATGACGTTGCTGCCTCTTGTAAGCCCTCATCCTCTTCATCGTCCTCGCAGCAGACTGGACGCGAGGTATTCTTTACTTCTTTTCAATTCATTTTTTTACCTCCTGATCGTTGGAAGCTAGTCAGTGGTGTTGCTTGTTGTTATATTGAAATTTCTGTGTGTCGCAGTCGATTTTAGGTTCGGTTTGTTTTTGTGTTAATCAGTTCAATCGTGGCAGTCGCCTTCCTCCTCCTCTTCTTCTATTTTTCTGTTTCTTCTCGTTCTTGTGTTGCTTGGTGGACTGCTTTTGTCATGGTTGGAGCACGAGTTCATCCTTATGTACTTTAATTATTCACTCTACCATATTTTATACGTTAGAAGTTTTACGCTTTTGGAATTATCAATGTGTTTCTCCACTGTAGGGTTCAATTGATCCAATCGATATTTCTGAATTGTGGCCCTTAGAGATTATGTTTCAGATGCCTTGTGGTCGCTCTTGTATGATTCATAAAAAGGCATTCCTCCAAGAGTTTGATAGCTTAACAATTCTTTTCGATTTTGAAAAATTACTGATGGAATACTTACAACTGCTTCCTCTCAAAAGAAAAAAAAAAAACAAAATGATGGGAGTATTTACTTCAGTACGGATGTTAAAAACTCACATCTTTTAAATGTCTAGTTCACTCTATGAAGTTATTAATACTATAGTTGGAATAGCTATGGATGTGTACTACACCAACTTAATTAGCTGAGGGAGAATGTTGAAATCTTTTCTTTTTATGCATCAAGCTTATTTTAGTCATTCTGTCATTTAAAATTGGAATAGCCAGTTACTTGTTATTCAAATTTTCTATCCGGGGTTCAAATATCTATTTTTTCTCCTGTGCAGACATTTTACAGAGTCTTTAGGAGCTGGGCCTCAAAAAAGTTCATGACCGGATGGTTTGTTATTTATTCTTTTCTTTGTAGTTAATTTTATTCAATGTTTTTGATGCTAAGAAAACATGGCATATAAACTAAAATTGCACTTTCAGCCTGCTGTTTGAAAACTGCACTTGAAATTTTGTTCTATTTATATAATGGAATAGAGTTGTTATTTCCCTCAGTAAGTATGTTGAGCAGGGTAATAGGTTTTGAATTGGAAATAAATATTTATTTGTTTGCAACTTGCCAGCATTTCCAATTACAGTTGTTTGTCATTGTGCTTACTGCTGAGTGATAAGTGATAATAGTGTTTTAATACCTTAACGAGTTACCATCTGCCTATTTTGCAGTGTCATTCTATTTCCTATTGCAATAACTTTCTATATAACGTGGTGGTTTATTCACTTTGTGGATGGATTTTTTTCTCCGATCTATGCAAAACTTGGAATTAATATCTTTGGTAAGCAATCTTTATCACTGAACACTTCGTCTCAGCCCATTCAGTCCATGTGCAATTTGTTTCATATGCATTTTATACTACCTACATGAGTGATCATCGTTATTTACCTCCATCAATATCTGTTTTCTTTTTGCTGCTCATATGCAGATAGGAAATATCGAAAATAATTATGTAAATGCTTATATTGCCAGATGATTAATGAGTGTTCGTTCATTGCGAAAACCTGTTAAATTGTAAATTTCAAAGTTTCTTATCATTAGCTTATTCTCATTTCTTGAATAGGTCTTGGATTTGCAACATCTGTATCGTTCATCTTCCTTGTTGGGGTGTTCATGTCATCATGGTTGGGTGCTTCTGTTTTGGCTCTTGGAGAGTGGTTCATCAAGCGCATGCCATTTGTTCGTCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGGTACATCTTTCGTAAGTGTATTTATTTAACTTGGTCAGGTTTATATATGAACCATCTATAATCTCGTCATTTTCTGTTAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCCATCATTAGGCACCCTCGTATTGGTGAATATGCATTTGGGTTCATTACTTCAACTGTCACTCTCCAGGTATGTTATTTTTGCTTCAATTTCTTTCATTACATTCTGCCTAACCCTAGGAGATAGTTTGGGGTCACCTTCTAGACTTGTTGACATCTCGATATTTGTTGGTCATTTAATCCCTAGGAGATAGTTTGGGGTCACCTTCTAGACTTGTTGACATCTCGATATTTGTTGGTCATTTAATAAATCTCATTGGTCATTGTATCGCTTATGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCACACACACAATACAAAGTTGATTTAAAAATAAATNACCCTAGGAGATAGTTTGGGGTCACCTTCTAGACTTGTTGACATCTCGATATTTGTTGGTCATTTAATAAATCTCATTGGTCATTGTATCGCTTATGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCACACACACAATACAAAGTTGATTTAAAAATAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCACACACACAATACAAAGTTGATTTAAAAATAAATGTTTGATTTTCTTATTGGAGCATATAATTGCATTTACATTTTTATATTTCTTGATAAACATGACTGGTTTGATTTATATTTAGCTGGTTTTGGAACCTTCACGAACATTTGTTACATGACAGCCTAGCATTACATATATGTAACTGATTTCTACTTTGCGTTGGTTTCATATTGTGGGATATCTTCTTGCACGTAGTATTTTTACTGTAAATGTTATAATTTGAAATGTAAACTTGGTTCATGAAAACAACCAACTTCAACCTATAATACCCTTATCACTTATCACACATGGATCCACATGCTTATTTCGAACATGAAAATCATTGACATTGTGGGTATAGCAATATGTTTTATCGAATAATTTATGTATTCATATCTAATTTTGTAGAAATGATATTTCGTTATTATATCTCTGATCATGCTTTTTATACATGCTTCTTAGCATTTTATTGATTTAAGGGTTTATTTTATTTTTATGGTTCTCGTGAATCTATCTTCAATTTTATATCTTAGATTCTTAGTTTTGGTTAAAAATTTATATTAATATTTTTTTCACCGTTTTTAAAATTGTATGAATGTGGATGGGCTGCTAACCATCCGTGGGCAGCCCAAACCAGTGTTTTTAAAGCGTGAGGTACCAAAAAAATGGGTGTTTTTTTTTTATGAGTTGTCCAATTGAAGAATGAAAGTAAATCAATAAGAAGGTAATGAAAAGTTCAAGAAAATTGGAGATTGCGGAGGAAATTGAACGTTTTCCGAGAATATTTCTTAATTTCTTCCTACAACTTTAAAAATGAAAAAAATGGCCTTCATTTGGCGGCAAGATGAGCTTTTCAGATCAGTGGCCTTAGGTGAGGATTAAGTTGCCAAATACTACTTTGTGAACTGTTTTCTTTTTATTTTTGGGTAACTTAATTATGTTCTTAGTCATGTTGCACCTTTTTCAACTGCCATAACCTGTAATGCACAGGTGCTGCGAAGTTTTATATACTGATCAACCCCCCACTCTAAATGCAGAGTTATTCTGGAGAGGAGGAGCTGTGTTGTGTGTACGTTCCCACCAATCATCTTTATATCGGTGATGTTTTCCTAGTCAACTCTCAGGATGTTATTAGACCAAATTTATCAGTTCGGGAGGGAATCGGTGAGTTCTTCTGTTTATGTCATTATCTAGTTTGACCTGAATTTCAAATGAACTAAAAGCCCCCAATTTCAACCCCCTCACACACACACACAAGTAATAATTTAGGAAATTCAAGGGTTGATCAGGAATTATCTTTCTATCTAAGAGGACATGACTTGTAGCTTTCTAAGAGTAGAAAGGAAATTAATTATTTAAATTGCAGAAATCGTCGTGTCTGGAGGCATGTCGATGCCACAGATACTATCCATACTGGATTCAGATATCCGGCCAATTGATGGTAGAAGACTGACTAGAAGCTGAGACCGAAGATGTAGAAATGCTGGCTGCTAATCAATATACGGTTTTGGGGATGACAATTTAGTTGCTCTGCCTGGCTGGGCATCAAAACCTTTAGTCGGCAAAGCATAACTTATAATAGAAATTTGTCTGGTAGTTGAAATTTAATGTCATAAAATAGTTGTTGATCCAGTATAGTAGGAAATGGATGTGCATTAGAACTTCTCTTCATTCTAATTCAATCGAGAGTGTTTACTTTCTTCTTCTTGGTGAGTCACATAGTTCTGTTGCGTCAGATGTATATTTGAGACTGTACATATTTTGCAGTGATATATCGATGCACTATGAAACACGTCA
mRNA sequence
GACTTCAAAGGGTTGCCTTGTTGCCGGTCTACTGTCTTCGGGGCGAAGGTTTTTAAGCTGCAGAACGCTGTGGCTGGGCTTTCCAATAGGGGCTGCCGTTAATGGCCGACGAAAAAGCGGCGATTGCGATCGCCAGCAGAGATAGAGAGCGAGATCTACAGCTTCTAATTCCCGTTGCCGGCTCGCCAAATGACGTTGCTGCCTCTTGTAAGCCCTCATCCTCTTCATCGTCCTCGCAGCAGACTGGACGCGAGACATTTTACAGAGTCTTTAGGAGCTGGGCCTCAAAAAAGTTCATGACCGGATGTGTCATTCTATTTCCTATTGCAATAACTTTCTATATAACGTGGTGGTTTATTCACTTTGTGGATGGATTTTTTTCTCCGATCTATGCAAAACTTGGAATTAATATCTTTGGTCTTGGATTTGCAACATCTGTATCGTTCATCTTCCTTGTTGGGGTGTTCATGTCATCATGGTTGGGTGCTTCTGTTTTGGCTCTTGGAGAGTGGTTCATCAAGCGCATGCCATTTGTTCGTCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCCATCATTAGGCACCCTCGTATTGGTGAATATGCATTTGGGTTCATTACTTCAACTGTCACTCTCCAGAGTTATTCTGGAGAGGAGGAGCTGTGTTGTGTGTACGTTCCCACCAATCATCTTTATATCGGTGATGTTTTCCTAGTCAACTCTCAGGATGTTATTAGACCAAATTTATCAGTTCGGGAGGGAATCGAAATCGTCGTGTCTGGAGGCATGTCGATGCCACAGATACTATCCATACTGGATTCAGATATCCGGCCAATTGATGGTAGAAGACTGACTAGAAGCTGAGACCGAAGATGTAGAAATGCTGGCTGCTAATCAATATACGGTTTTGGGGATGACAATTTAGTTGCTCTGCCTGGCTGGGCATCAAAACCTTTAGTCGGCAAAGCATAACTTATAATAGAAATTTGTCTGGTAGTTGAAATTTAATGTCATAAAATAGTTGTTGATCCAGTATAGTAGGAAATGGATGTGCATTAGAACTTCTCTTCATTCTAATTCAATCGAGAGTGTTTACTTTCTTCTTCTTGGTGAGTCACATAGTTCTGTTGCGTCAGATGTATATTTGAGACTGTACATATTTTGCAGTGATATATCGATGCACTATGAAACACGTCA
Coding sequence (CDS)
ATGGCCGACGAAAAAGCGGCGATTGCGATCGCCAGCAGAGATAGAGAGCGAGATCTACAGCTTCTAATTCCCGTTGCCGGCTCGCCAAATGACGTTGCTGCCTCTTGTAAGCCCTCATCCTCTTCATCGTCCTCGCAGCAGACTGGACGCGAGACATTTTACAGAGTCTTTAGGAGCTGGGCCTCAAAAAAGTTCATGACCGGATGTGTCATTCTATTTCCTATTGCAATAACTTTCTATATAACGTGGTGGTTTATTCACTTTGTGGATGGATTTTTTTCTCCGATCTATGCAAAACTTGGAATTAATATCTTTGGTCTTGGATTTGCAACATCTGTATCGTTCATCTTCCTTGTTGGGGTGTTCATGTCATCATGGTTGGGTGCTTCTGTTTTGGCTCTTGGAGAGTGGTTCATCAAGCGCATGCCATTTGTTCGTCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCCATCATTAGGCACCCTCGTATTGGTGAATATGCATTTGGGTTCATTACTTCAACTGTCACTCTCCAGAGTTATTCTGGAGAGGAGGAGCTGTGTTGTGTGTACGTTCCCACCAATCATCTTTATATCGGTGATGTTTTCCTAGTCAACTCTCAGGATGTTATTAGACCAAATTTATCAGTTCGGGAGGGAATCGAAATCGTCGTGTCTGGAGGCATGTCGATGCCACAGATACTATCCATACTGGATTCAGATATCCGGCCAATTGATGGTAGAAGACTGACTAGAAGCTGA
Protein sequence
MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVVSGGMSMPQILSILDSDIRPIDGRRLTRS
Homology
BLAST of CmoCh10G006630 vs. ExPASy Swiss-Prot
Match:
F4IUE7 (Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 SV=2)
HSP 1 Score: 400.2 bits (1027), Expect = 1.8e-110
Identity = 209/265 (78.87%), Postives = 225/265 (84.91%), Query Frame = 0
Query: 1 MADEKAAIAIASRDRERDLQLLIPVAGS-PNDVAASCKPSSS---SSSSQQTGRETFYRV 60
M DEK I +A +RERD +LLIPVA S D +S KPSSS SSSS Q+ ET
Sbjct: 1 MGDEKPVIVMA--NRERDRELLIPVADSGDKDDGSSSKPSSSSSASSSSHQSSHETLSLF 60
Query: 61 FRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFI 120
R WASKKFMTGCVIL PIAITFYITWWFIHFVDGFFSPIYA+LGIN+FG GF TS++FI
Sbjct: 61 IRGWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFI 120
Query: 121 FLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRH 180
FLVGVFMSSWLGASVL LGEWFIKRMPFVRHIYNASKQIS+AISPDQNT+AFKEVAIIRH
Sbjct: 121 FLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRH 180
Query: 181 PRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGI 240
PR+GEYAFGFITSTV LQ+Y EEELCCVYVPTNHLYIGD+ LVNS DVIRPNLSVREGI
Sbjct: 181 PRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGI 240
Query: 241 EIVVSGGMSMPQILSILDSDIRPID 262
EIVVSGGMSMPQILS +D + ID
Sbjct: 241 EIVVSGGMSMPQILSTVDKPLASID 263
BLAST of CmoCh10G006630 vs. ExPASy Swiss-Prot
Match:
Q8VY49 (Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1)
HSP 1 Score: 391.7 bits (1005), Expect = 6.5e-108
Identity = 202/250 (80.80%), Postives = 215/250 (86.00%), Query Frame = 0
Query: 14 DRERDLQLLIPVAG-SPNDVAASCKPSSSS--SSSQQTGRETFYRVFRSWASKKFMTGCV 73
+RERD +LLIPVA D +S KPSSSS SSS Q+G ET R WASKKFMTGCV
Sbjct: 3 NRERDRELLIPVADFGDKDDGSSSKPSSSSSASSSHQSGHETLSLFIRGWASKKFMTGCV 62
Query: 74 ILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVGVFMSSWLGAS 133
IL PIA+TFY TWWFIHFVDGFFSPIYA LGINIFG GF TS++FIFLVGVFMSSWLGAS
Sbjct: 63 ILLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSWLGAS 122
Query: 134 VLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYAFGFITST 193
VL LGEWFIKRMPFVRHIYNASKQIS+AISPDQNT+AFKEVAIIRHPR+GEYAFGFITST
Sbjct: 123 VLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITST 182
Query: 194 VTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVVSGGMSMPQIL 253
V LQ+Y EEELCCVYVPTNHLYIGD+ LVNS DVIRPNLSVREGIEIVVSGGMSMPQIL
Sbjct: 183 VVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQIL 242
Query: 254 SILDSDIRPI 261
S LD + I
Sbjct: 243 STLDKPLASI 252
BLAST of CmoCh10G006630 vs. ExPASy Swiss-Prot
Match:
F4IQJ6 (Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1)
HSP 1 Score: 363.6 bits (932), Expect = 1.9e-99
Identity = 177/245 (72.24%), Postives = 208/245 (84.90%), Query Frame = 0
Query: 15 RERDLQLLIPV---AGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSWASKKFMTGCVI 74
RERDL+ LIP+ SP DV S PS +S G+E Y+V RSWASKKFMTGCVI
Sbjct: 4 RERDLERLIPMHKSGASPRDVVLSVPPSPLASPIHVAGKEAIYKVIRSWASKKFMTGCVI 63
Query: 75 LFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVGVFMSSWLGASV 134
L PIA+TFY TWWFIHFVDGFFSPIY LGIN+FGLGF TS++FIF+VGVFMSSWLGASV
Sbjct: 64 LLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGFVTSITFIFMVGVFMSSWLGASV 123
Query: 135 LALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYAFGFITSTV 194
L++GEWFIK+MP V +IY+ASKQIS AISPDQ++ AFKEVAIIRHP +GEYAFGFITSTV
Sbjct: 124 LSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRHPHMGEYAFGFITSTV 183
Query: 195 TLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVVSGGMSMPQILS 254
L+ +G EELCCVYVPTNHLY+GD+FL++S+D+IRPNLSVREGIEIV+SGGMS+P +L+
Sbjct: 184 ILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLSVREGIEIVISGGMSIPHMLT 243
Query: 255 ILDSD 257
LDS+
Sbjct: 244 TLDSE 248
BLAST of CmoCh10G006630 vs. ExPASy Swiss-Prot
Match:
Q9C8C1 (Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1)
HSP 1 Score: 323.2 bits (827), Expect = 2.8e-87
Identity = 158/217 (72.81%), Postives = 186/217 (85.71%), Query Frame = 0
Query: 38 PSSSSSSSQQTGRETFYRVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIY 97
P S +S + R+ Y V +SW SKKFMTG V+LFP+A+TF ITWWFI FVDGFFSPIY
Sbjct: 26 PKSPPNSPNSSTRKACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIY 85
Query: 98 AKLGINIFGLGFATSVSFIFLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISS 157
LG++IFGLGF TSV F F VG+F SSWLG++V LGE FI+RMPFV+HIY+ASKQIS+
Sbjct: 86 ENLGVDIFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQIST 145
Query: 158 AISPDQNTKAFKEVAIIRHPRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDV 217
AISPDQNT AFKEVAIIRHPRIGEYAFGFITS+VTLQ+ GEEELC VYVPTNHLYIGDV
Sbjct: 146 AISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDV 205
Query: 218 FLVNSQDVIRPNLSVREGIEIVVSGGMSMPQILSILD 255
FLV+S+++IRPNLS+REGIEI+VS GM+MPQ++S +D
Sbjct: 206 FLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVD 242
BLAST of CmoCh10G006630 vs. ExPASy TrEMBL
Match:
A0A6J1H9X5 (protein LIKE COV 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461852 PE=4 SV=1)
HSP 1 Score: 525.0 bits (1351), Expect = 1.8e-145
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
Query: 1 MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW 60
MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW
Sbjct: 1 MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW 60
Query: 61 ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG 120
ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG
Sbjct: 61 ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG 120
Query: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180
VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG
Sbjct: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180
Query: 181 EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240
EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV
Sbjct: 181 EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240
Query: 241 SGGMSMPQILSILDSDIRPIDGRRLTRS 269
SGGMSMPQILSILDSDIRPIDGRRLTRS
Sbjct: 241 SGGMSMPQILSILDSDIRPIDGRRLTRS 268
BLAST of CmoCh10G006630 vs. ExPASy TrEMBL
Match:
A0A6J1JFG6 (protein LIKE COV 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485261 PE=4 SV=1)
HSP 1 Score: 516.2 bits (1328), Expect = 8.5e-143
Identity = 264/268 (98.51%), Postives = 265/268 (98.88%), Query Frame = 0
Query: 1 MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW 60
MADEKAAIAI+SRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW
Sbjct: 1 MADEKAAIAISSRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW 60
Query: 61 ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG 120
ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG
Sbjct: 61 ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG 120
Query: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180
VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG
Sbjct: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180
Query: 181 EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240
EYAFGFITSTVTLQSYS EEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV
Sbjct: 181 EYAFGFITSTVTLQSYSEEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240
Query: 241 SGGMSMPQILSILDSDIRPIDGRRLTRS 269
SGGMSMPQILSILDSDIRPID RR TRS
Sbjct: 241 SGGMSMPQILSILDSDIRPIDARRRTRS 268
BLAST of CmoCh10G006630 vs. ExPASy TrEMBL
Match:
A0A1S3CI12 (protein LIKE COV 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 SV=1)
HSP 1 Score: 499.2 bits (1284), Expect = 1.1e-137
Identity = 256/268 (95.52%), Postives = 262/268 (97.76%), Query Frame = 0
Query: 1 MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW 60
MAD+KA IAIA+RDRERDL+LLIPVA SP D ASCKPSSSSSSSQQTGRETFYRVFRSW
Sbjct: 1 MADDKAPIAIATRDRERDLELLIPVASSPKD-DASCKPSSSSSSSQQTGRETFYRVFRSW 60
Query: 61 ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG 120
ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYA+LGI+IFGLGFATSV+FIFLVG
Sbjct: 61 ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFATSVTFIFLVG 120
Query: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180
VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG
Sbjct: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180
Query: 181 EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240
EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV
Sbjct: 181 EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240
Query: 241 SGGMSMPQILSILDSDIRPIDGRRLTRS 269
SGGMSMPQILSILDSDIRPID RRLTRS
Sbjct: 241 SGGMSMPQILSILDSDIRPIDSRRLTRS 267
BLAST of CmoCh10G006630 vs. ExPASy TrEMBL
Match:
A0A1S4E3W8 (protein LIKE COV 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 SV=1)
HSP 1 Score: 491.5 bits (1264), Expect = 2.2e-135
Identity = 256/277 (92.42%), Postives = 262/277 (94.58%), Query Frame = 0
Query: 1 MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRE--------- 60
MAD+KA IAIA+RDRERDL+LLIPVA SP D ASCKPSSSSSSSQQTGRE
Sbjct: 1 MADDKAPIAIATRDRERDLELLIPVASSPKD-DASCKPSSSSSSSQQTGREEFYVFGILK 60
Query: 61 TFYRVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFAT 120
TFYRVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYA+LGI+IFGLGFAT
Sbjct: 61 TFYRVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFAT 120
Query: 121 SVSFIFLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEV 180
SV+FIFLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEV
Sbjct: 121 SVTFIFLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEV 180
Query: 181 AIIRHPRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 240
AIIRHPRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS
Sbjct: 181 AIIRHPRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLS 240
Query: 241 VREGIEIVVSGGMSMPQILSILDSDIRPIDGRRLTRS 269
VREGIEIVVSGGMSMPQILSILDSDIRPID RRLTRS
Sbjct: 241 VREGIEIVVSGGMSMPQILSILDSDIRPIDSRRLTRS 276
BLAST of CmoCh10G006630 vs. ExPASy TrEMBL
Match:
A0A6J1CUV2 (protein LIKE COV 1-like OS=Momordica charantia OX=3673 GN=LOC111014556 PE=4 SV=1)
HSP 1 Score: 486.9 bits (1252), Expect = 5.5e-134
Identity = 248/268 (92.54%), Postives = 258/268 (96.27%), Query Frame = 0
Query: 1 MADEKAAIAIASRDRERDLQLLIPVAGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSW 60
MAD+KAAI +A RDRERDL+LLIPV GSPND AS KPSSS SSSQQTGR+TFYRVFRSW
Sbjct: 1 MADDKAAIVMAGRDRERDLELLIPVTGSPND-EASAKPSSSLSSSQQTGRQTFYRVFRSW 60
Query: 61 ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVG 120
ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYA+LGI+IFGLGFATSV+FIFLVG
Sbjct: 61 ASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFATSVTFIFLVG 120
Query: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIG 180
VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNT+AFKEVAIIRHPR+G
Sbjct: 121 VFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTQAFKEVAIIRHPRVG 180
Query: 181 EYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240
EYAFGFITSTVTLQ+YSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV
Sbjct: 181 EYAFGFITSTVTLQNYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVV 240
Query: 241 SGGMSMPQILSILDSDIRPIDGRRLTRS 269
SGGMSMPQILSILDS RPID RRLTRS
Sbjct: 241 SGGMSMPQILSILDSHARPIDSRRLTRS 267
BLAST of CmoCh10G006630 vs. TAIR 10
Match:
AT2G20120.1 (Protein of unknown function (DUF502) )
HSP 1 Score: 399.4 bits (1025), Expect = 2.2e-111
Identity = 209/265 (78.87%), Postives = 225/265 (84.91%), Query Frame = 0
Query: 1 MADEKAAIAIASRDRERDLQLLIPVAGS-PNDVAASCKPSSS---SSSSQQTGRETFYRV 60
M DEK I +A +RERD +LLIPVA S D +S KPSSS SSSS Q+ ET
Sbjct: 1 MGDEKPVIVMA--NRERDRELLIPVADSGDKDDGSSSKPSSSSSASSSSHQSSHETLSLF 60
Query: 61 FRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFI 120
R WASKKFMTGCVIL PIAITFYITWWFIHFVDGFFSPIYA+LGIN+FG GF TS++FI
Sbjct: 61 IRGWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFI 120
Query: 121 FLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRH 180
FLVGVFMSSWLGASVL LGEWFIKRMPFVRHIYNASKQIS+AISPDQNT+AFKEVAIIRH
Sbjct: 121 FLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRH 180
Query: 181 PRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGI 240
PR+GEYAFGFITSTV LQ+Y EEELCCVYVPTNHLYIGD+ LVNS DVIRPNLSVREGI
Sbjct: 181 PRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDLLLVNSNDVIRPNLSVREGI 240
Query: 241 EIVVSGGMSMPQILSILDSDIRPID 262
EIVVSGGMSMPQILS +D + ID
Sbjct: 241 EIVVSGGMSMPQILSTVDKPLASID 263
BLAST of CmoCh10G006630 vs. TAIR 10
Match:
AT2G20130.1 (like COV 1 )
HSP 1 Score: 391.7 bits (1005), Expect = 4.6e-109
Identity = 202/250 (80.80%), Postives = 215/250 (86.00%), Query Frame = 0
Query: 14 DRERDLQLLIPVAG-SPNDVAASCKPSSSS--SSSQQTGRETFYRVFRSWASKKFMTGCV 73
+RERD +LLIPVA D +S KPSSSS SSS Q+G ET R WASKKFMTGCV
Sbjct: 3 NRERDRELLIPVADFGDKDDGSSSKPSSSSSASSSHQSGHETLSLFIRGWASKKFMTGCV 62
Query: 74 ILFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVGVFMSSWLGAS 133
IL PIA+TFY TWWFIHFVDGFFSPIYA LGINIFG GF TS++FIFLVGVFMSSWLGAS
Sbjct: 63 ILLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSWLGAS 122
Query: 134 VLALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYAFGFITST 193
VL LGEWFIKRMPFVRHIYNASKQIS+AISPDQNT+AFKEVAIIRHPR+GEYAFGFITST
Sbjct: 123 VLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITST 182
Query: 194 VTLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVVSGGMSMPQIL 253
V LQ+Y EEELCCVYVPTNHLYIGD+ LVNS DVIRPNLSVREGIEIVVSGGMSMPQIL
Sbjct: 183 VVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQIL 242
Query: 254 SILDSDIRPI 261
S LD + I
Sbjct: 243 STLDKPLASI 252
BLAST of CmoCh10G006630 vs. TAIR 10
Match:
AT2G18460.1 (like COV 3 )
HSP 1 Score: 363.6 bits (932), Expect = 1.3e-100
Identity = 177/245 (72.24%), Postives = 208/245 (84.90%), Query Frame = 0
Query: 15 RERDLQLLIPV---AGSPNDVAASCKPSSSSSSSQQTGRETFYRVFRSWASKKFMTGCVI 74
RERDL+ LIP+ SP DV S PS +S G+E Y+V RSWASKKFMTGCVI
Sbjct: 4 RERDLERLIPMHKSGASPRDVVLSVPPSPLASPIHVAGKEAIYKVIRSWASKKFMTGCVI 63
Query: 75 LFPIAITFYITWWFIHFVDGFFSPIYAKLGINIFGLGFATSVSFIFLVGVFMSSWLGASV 134
L PIA+TFY TWWFIHFVDGFFSPIY LGIN+FGLGF TS++FIF+VGVFMSSWLGASV
Sbjct: 64 LLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGFVTSITFIFMVGVFMSSWLGASV 123
Query: 135 LALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYAFGFITSTV 194
L++GEWFIK+MP V +IY+ASKQIS AISPDQ++ AFKEVAIIRHP +GEYAFGFITSTV
Sbjct: 124 LSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRHPHMGEYAFGFITSTV 183
Query: 195 TLQSYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVVSGGMSMPQILS 254
L+ +G EELCCVYVPTNHLY+GD+FL++S+D+IRPNLSVREGIEIV+SGGMS+P +L+
Sbjct: 184 ILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLSVREGIEIVISGGMSIPHMLT 243
Query: 255 ILDSD 257
LDS+
Sbjct: 244 TLDSE 248
BLAST of CmoCh10G006630 vs. TAIR 10
Match:
AT1G43130.1 (like COV 2 )
HSP 1 Score: 323.2 bits (827), Expect = 2.0e-88
Identity = 158/217 (72.81%), Postives = 186/217 (85.71%), Query Frame = 0
Query: 38 PSSSSSSSQQTGRETFYRVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIY 97
P S +S + R+ Y V +SW SKKFMTG V+LFP+A+TF ITWWFI FVDGFFSPIY
Sbjct: 26 PKSPPNSPNSSTRKACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIY 85
Query: 98 AKLGINIFGLGFATSVSFIFLVGVFMSSWLGASVLALGEWFIKRMPFVRHIYNASKQISS 157
LG++IFGLGF TSV F F VG+F SSWLG++V LGE FI+RMPFV+HIY+ASKQIS+
Sbjct: 86 ENLGVDIFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQIST 145
Query: 158 AISPDQNTKAFKEVAIIRHPRIGEYAFGFITSTVTLQSYSGEEELCCVYVPTNHLYIGDV 217
AISPDQNT AFKEVAIIRHPRIGEYAFGFITS+VTLQ+ GEEELC VYVPTNHLYIGDV
Sbjct: 146 AISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDV 205
Query: 218 FLVNSQDVIRPNLSVREGIEIVVSGGMSMPQILSILD 255
FLV+S+++IRPNLS+REGIEI+VS GM+MPQ++S +D
Sbjct: 206 FLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVD 242
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
F4IUE7 | 1.8e-110 | 78.87 | Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 ... | [more] |
Q8VY49 | 6.5e-108 | 80.80 | Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1 | [more] |
F4IQJ6 | 1.9e-99 | 72.24 | Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1 | [more] |
Q9C8C1 | 2.8e-87 | 72.81 | Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1H9X5 | 1.8e-145 | 100.00 | protein LIKE COV 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461852... | [more] |
A0A6J1JFG6 | 8.5e-143 | 98.51 | protein LIKE COV 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485261 P... | [more] |
A0A1S3CI12 | 1.1e-137 | 95.52 | protein LIKE COV 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 ... | [more] |
A0A1S4E3W8 | 2.2e-135 | 92.42 | protein LIKE COV 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 ... | [more] |
A0A6J1CUV2 | 5.5e-134 | 92.54 | protein LIKE COV 1-like OS=Momordica charantia OX=3673 GN=LOC111014556 PE=4 SV=1 | [more] |