CmoCh10G006520 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G006520
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	heat stress transcription factor C-1-like
Location	Cmo_Chr10: 2987379 .. 2988593 (+)
RNA-Seq Expression	CmoCh10G006520
Synteny	CmoCh10G006520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAAAACTTAAATCCCCCCTCCCCTCCGCCATTTTCAACTGTCTTCTTCTTCTTCTTCTTCTTCTTCAGAGAACAGGAAGAGAGCTTATGGGATGGAGGTTAATTGCGGAAACGACATTGTTGCACCTTTTATTTTGAAGACTTATCAGATGGTCAACGATCCCCTTACCGACACTTCCATTACTTGGGGCTCTGCTAATAACAGCTTCGTCGTTCTCGACCCTCTCCATTTCTCTCATACCCTCTTGCCTGCTTTTTTCAAGCATAATAACTTCTCTAGCTTCATCCGACAGCTCAATACTTACGTATGTAATTCCCAATTCTAATTCTAATTCCCAATTTCCTCTGTTTTTTATTTTTTGTTTTAATTTGATTTGATTTTTCGGAGAGAACAGGGGTTTCGGAAGGTAGATCCGGATCGATGGGAATTCGCGAACGAGTGGTTTCTACGGGGCCAATACCACTTACTCAGAAACATAGTGAGGAGAAAACACTGTAGTAATTCCGCCGTCAAATTGGTTGGAGTTGGGGGGGATATGTCGGATGAGGATTTGGTGTCGGAGATTGGGAGGTTGAGGAAAGAACAGAGGGCTCTGGAACACCAGCTCCAAGCGATGAAGAAACGCCTGGAAACCACCGAGAAACGCCCCCACCAAATGATGGCGTTTCTTCATAAAGTCGTGGAGGACCCTGAAATTCTGCCCCGGATCATGCTCCACCGGGATCCCACCCACCGCTTCCAAATCCCCGATAAGAAGAGGCGTTTCATGACTTCCCCTTCTTCCTCCTCCCCCTCCACCGCTTCCTTCGACACCGACGAAATCGAAGACGACCCCACCCGCCCCGAGGTGTCGGGGCCGTGGTTTCTGGAAGACCCGGCTGCGTTTGGAGTTCCGGCAGTGGCGCCGATGGATATTGGTATAAGCAGTAGCGGCGGAGAGATGAAATACTTGACGGAAATGACAGTGGGGGCAGTGGAGGAGAGTCGCCCACCACCGCCTTATCCATTTTCTCTTTTCGGGTGTGGATTTTAGTTAATTACTTCATTTAATTTCACATCATTTTCTTCCTTCTCGCATTTTATCTTTATTAATAATTTCTTCCACTTCTCTTTCTTTTCTTTTTCTTTTACCCAATACATTTGTATATGCATATGTAACTGTCTCATTTAATTCTGCAAAAAATAAAAATAAAAAATAAAAAATAACCCAA

mRNA sequence

AAATAAAAACTTAAATCCCCCCTCCCCTCCGCCATTTTCAACTGTCTTCTTCTTCTTCTTCTTCTTCTTCAGAGAACAGGAAGAGAGCTTATGGGATGGAGGTTAATTGCGGAAACGACATTGTTGCACCTTTTATTTTGAAGACTTATCAGATGGTCAACGATCCCCTTACCGACACTTCCATTACTTGGGGCTCTGCTAATAACAGCTTCGTCGTTCTCGACCCTCTCCATTTCTCTCATACCCTCTTGCCTGCTTTTTTCAAGCATAATAACTTCTCTAGCTTCATCCGACAGCTCAATACTTACGGGTTTCGGAAGGTAGATCCGGATCGATGGGAATTCGCGAACGAGTGGTTTCTACGGGGCCAATACCACTTACTCAGAAACATAGTGAGGAGAAAACACTGTAGTAATTCCGCCGTCAAATTGGTTGGAGTTGGGGGGGATATGTCGGATGAGGATTTGGTGTCGGAGATTGGGAGGTTGAGGAAAGAACAGAGGGCTCTGGAACACCAGCTCCAAGCGATGAAGAAACGCCTGGAAACCACCGAGAAACGCCCCCACCAAATGATGGCGTTTCTTCATAAAGTCGTGGAGGACCCTGAAATTCTGCCCCGGATCATGCTCCACCGGGATCCCACCCACCGCTTCCAAATCCCCGATAAGAAGAGGCGTTTCATGACTTCCCCTTCTTCCTCCTCCCCCTCCACCGCTTCCTTCGACACCGACGAAATCGAAGACGACCCCACCCGCCCCGAGGTGTCGGGGCCGTGGTTTCTGGAAGACCCGGCTGCGTTTGGAGTTCCGGCAGTGGCGCCGATGGATATTGGTATAAGCAGTAGCGGCGGAGAGATGAAATACTTGACGGAAATGACAGTGGGGGCAGTGGAGGAGAGTCGCCCACCACCGCCTTATCCATTTTCTCTTTTCGGGTGTGGATTTTAGTTAATTACTTCATTTAATTTCACATCATTTTCTTCCTTCTCGCATTTTATCTTTATTAATAATTTCTTCCACTTCTCTTTCTTTTCTTTTTCTTTTACCCAATACATTTGTATATGCATATGTAACTGTCTCATTTAATTCTGCAAAAAATAAAAATAAAAAATAAAAAATAACCCAA

Coding sequence (CDS)

ATGGAGGTTAATTGCGGAAACGACATTGTTGCACCTTTTATTTTGAAGACTTATCAGATGGTCAACGATCCCCTTACCGACACTTCCATTACTTGGGGCTCTGCTAATAACAGCTTCGTCGTTCTCGACCCTCTCCATTTCTCTCATACCCTCTTGCCTGCTTTTTTCAAGCATAATAACTTCTCTAGCTTCATCCGACAGCTCAATACTTACGGGTTTCGGAAGGTAGATCCGGATCGATGGGAATTCGCGAACGAGTGGTTTCTACGGGGCCAATACCACTTACTCAGAAACATAGTGAGGAGAAAACACTGTAGTAATTCCGCCGTCAAATTGGTTGGAGTTGGGGGGGATATGTCGGATGAGGATTTGGTGTCGGAGATTGGGAGGTTGAGGAAAGAACAGAGGGCTCTGGAACACCAGCTCCAAGCGATGAAGAAACGCCTGGAAACCACCGAGAAACGCCCCCACCAAATGATGGCGTTTCTTCATAAAGTCGTGGAGGACCCTGAAATTCTGCCCCGGATCATGCTCCACCGGGATCCCACCCACCGCTTCCAAATCCCCGATAAGAAGAGGCGTTTCATGACTTCCCCTTCTTCCTCCTCCCCCTCCACCGCTTCCTTCGACACCGACGAAATCGAAGACGACCCCACCCGCCCCGAGGTGTCGGGGCCGTGGTTTCTGGAAGACCCGGCTGCGTTTGGAGTTCCGGCAGTGGCGCCGATGGATATTGGTATAAGCAGTAGCGGCGGAGAGATGAAATACTTGACGGAAATGACAGTGGGGGCAGTGGAGGAGAGTCGCCCACCACCGCCTTATCCATTTTCTCTTTTCGGGTGTGGATTTTAG

Protein sequence

MEVNCGNDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNNFSSFIRQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAVKLVGVGGDMSDEDLVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIMLHRDPTHRFQIPDKKRRFMTSPSSSSPSTASFDTDEIEDDPTRPEVSGPWFLEDPAAFGVPAVAPMDIGISSSGGEMKYLTEMTVGAVEESRPPPPYPFSLFGCGF

Homology

[Close]

BLAST of CmoCh10G006520 vs. ExPASy Swiss-Prot
Match: Q9LV52 (Heat stress transcription factor C-1 OS=Arabidopsis thaliana OX=3702 GN=HSFC1 PE=1 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.4e-70
Identity = 156/334 (46.71%), Postives = 194/334 (58.08%), Query Frame = 0


Query: 4   NCGNDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNNFSS 63
           N  N+++APFI+KTYQMVNDP TD  ITWG A+NSF+V+DPL FS  +LPA+FKHNNFSS
Sbjct: 9   NNNNNVIAPFIVKTYQMVNDPSTDWLITWGPAHNSFIVVDPLDFSQRILPAYFKHNNFSS 68

Query: 64  FIRQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAVKLVGVGGDMSDED 123
           F+RQLNTYGFRKVDPDRWEFANE FLRGQ HLL NI RRKH           G D+ D +
Sbjct: 69  FVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLNNIARRKHARGM------YGQDLEDGE 128

Query: 124 LVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIMLHRDPT 183
           +V EI RL++EQR LE ++Q M +R+E TEKRP QMMAFL+KVVEDP++LPR+ML ++ T
Sbjct: 129 IVREIERLKEEQRELEAEIQRMNRRIEATEKRPEQMMAFLYKVVEDPDLLPRMMLEKERT 188

Query: 184 -HRFQIPDKKRRFMTSPSSSSPSTASFDTDEIEDD------------PTRPEVSGPWFLE 243
             + Q+ DKK+R +T       ST   + +E+E+D            P+       +   
Sbjct: 189 KQQQQVSDKKKRRVTM------STVKSEEEEVEEDEGRVFRVMSSSTPSPSSTENLYRNH 248

Query: 244 DPAAFGVPAV---------------------------------APMDI------GISSSG 284
            P  + VP                                    P  +      G  S  
Sbjct: 249 SPDGWIVPMTQGQFGSYETGLVAKSMLSNSTSSTSSSLTSTFSLPESVNGGGGGGCGSIQ 308

[Close]

BLAST of CmoCh10G006520 vs. ExPASy Swiss-Prot
Match: Q6EUG4 (Heat stress transcription factor C-2a OS=Oryza sativa subsp. japonica OX=39947 GN=HSFC2A PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.2e-49
Identity = 107/191 (56.02%), Postives = 132/191 (69.11%), Query Frame = 0


Query: 6   GNDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNNFSSFI 65
           G   VAPF+ KTY+MV+DP TD  I WG  +NSFVV DP  FS TLLPA FKH+NFSSF+
Sbjct: 8   GGGGVAPFVAKTYRMVDDPATDGVIAWGRDSNSFVVADPFAFSQTLLPAHFKHSNFSSFV 67

Query: 66  RQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAVKLVGVG--------- 125
           RQLNTYGFRKVDPDRWEFA+  FLRGQ HLLR IVRR      A +    G         
Sbjct: 68  RQLNTYGFRKVDPDRWEFAHVSFLRGQTHLLRRIVRRSSGGGGAKRKEEAGGCGGGGEAA 127

Query: 126 -GDMSDEDLV--SEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEIL 185
            GD+ +E  V   E+ RLR+EQR +E ++ AM +R++ TE+RP QM+AFL KVV DP++L
Sbjct: 128 AGDVDEESAVVALEVARLRREQREIEGRVAAMWRRVQETERRPKQMLAFLVKVVGDPQVL 187

[Close]

BLAST of CmoCh10G006520 vs. ExPASy Swiss-Prot
Match: Q0DBL6 (Heat stress transcription factor C-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFC2B PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.2e-46
Identity = 100/180 (55.56%), Postives = 125/180 (69.44%), Query Frame = 0


Query: 11  APFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNNFSSFIRQLNT 70
           APF+ KTY+MV DP TD  I WG  NNSFVV DP  FS TLLPA FKHNNFSSF+RQLNT
Sbjct: 10  APFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNT 69

Query: 71  YGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCS-------------NSAVKLVGVGG 130
           YGFRKVDPDRWEFA+  FLRGQ HLLRNIVRR   +             +++    G GG
Sbjct: 70  YGFRKVDPDRWEFAHASFLRGQTHLLRNIVRRGSAAAGGGGGGGGGKRRDASADGGGGGG 129

Query: 131 DMSDEDLVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIM 178
           D     + +E+ RL++EQR ++ ++ AM +R++ TE+RP QM+AFL KVV D + L R++
Sbjct: 130 DEDMTMVATEVVRLKQEQRTIDDRVAAMWRRVQETERRPKQMLAFLLKVVGDRDKLHRLV 189

[Close]

BLAST of CmoCh10G006520 vs. ExPASy Swiss-Prot
Match: Q6VBA4 (Heat stress transcription factor C-1a OS=Oryza sativa subsp. japonica OX=39947 GN=HSFC1A PE=2 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 3.7e-45
Identity = 110/230 (47.83%), Postives = 132/230 (57.39%), Query Frame = 0


Query: 5   CGND---IVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNNF 64
           CG D     APF+ KTYQMV DP TD  + WG  NNSFVV+DP  FS  LLP FFKH NF
Sbjct: 16  CGGDGQQQTAPFVAKTYQMVCDPRTDALVRWGRDNNSFVVVDPAAFSQLLLPCFFKHGNF 75

Query: 65  SSFIRQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRK------------------ 124
           SSF+RQLNTYGFRKV PDRWEFA+E FLRGQ HLL  IVRRK                  
Sbjct: 76  SSFVRQLNTYGFRKVHPDRWEFAHESFLRGQTHLLPRIVRRKKRGEGGGGGGGASCSFGG 135

Query: 125 ----HCSNSAVKLVGVGGDMSD--ED-------LVSEIGRLRKEQRALEHQLQAMKKRLE 184
               H   +A   VG+ G+  D  ED       L  E+ RLR EQ A+  +L  M +RL+
Sbjct: 136 GAGEHQVAAAAASVGMSGEEEDAAEDVLAKEAALFEEVQRLRHEQTAIGEELARMSQRLQ 195

Query: 185 TTEKRPHQMMAFLHKVVEDPEILPRIMLHRDPTHRFQIPDKKRRFMTSPS 201
            TE+RP Q+M+FL K+ +DP  +   +L        Q  ++KRR    PS
Sbjct: 196 ATERRPDQLMSFLAKLADDPNAVTGHLLE-------QAAERKRRRQHLPS 238

[Close]

BLAST of CmoCh10G006520 vs. ExPASy Swiss-Prot
Match: Q942D6 (Heat stress transcription factor C-1b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFC1B PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 8.3e-45
Identity = 94/176 (53.41%), Postives = 122/176 (69.32%), Query Frame = 0


Query: 6   GNDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNNFSSFI 65
           G   VAPF+ KT+ MV+DP T+  + WG A N+F+VLDP  FS  LLP++FKH NF+SF+
Sbjct: 18  GPGAVAPFVAKTFHMVSDPSTNAVVRWGGAGNTFLVLDPAAFSDFLLPSYFKHRNFASFV 77

Query: 66  RQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAV---KLVGVGGDMSDE 125
           RQLNTYGFRKVDPDRWEFA+E FLRGQ  LL  IVR+K    +A    +L   G ++   
Sbjct: 78  RQLNTYGFRKVDPDRWEFAHESFLRGQAQLLPRIVRKKKKGGAAPGCRELCEEGEEV--R 137

Query: 126 DLVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIML 179
             +  + RLR+EQR +E +LQAM +RL   E RP QMMAFL K+ ++P ++ R ML
Sbjct: 138 GTIEAVQRLREEQRGMEEELQAMDQRLRAAESRPGQMMAFLAKLADEPGVVLRAML 191

[Close]

BLAST of CmoCh10G006520 vs. ExPASy TrEMBL
Match: A0A6J1H8H5 (heat stress transcription factor C-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461514 PE=3 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 3.9e-162
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MEVNCGNDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNN 60
           MEVNCGNDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNN
Sbjct: 1   MEVNCGNDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNN 60

Query: 61  FSSFIRQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAVKLVGVGGDMS 120
           FSSFIRQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAVKLVGVGGDMS
Sbjct: 61  FSSFIRQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAVKLVGVGGDMS 120

Query: 121 DEDLVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIMLHR 180
           DEDLVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIMLHR
Sbjct: 121 DEDLVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIMLHR 180

Query: 181 DPTHRFQIPDKKRRFMTSPSSSSPSTASFDTDEIEDDPTRPEVSGPWFLEDPAAFGVPAV 240
           DPTHRFQIPDKKRRFMTSPSSSSPSTASFDTDEIEDDPTRPEVSGPWFLEDPAAFGVPAV
Sbjct: 181 DPTHRFQIPDKKRRFMTSPSSSSPSTASFDTDEIEDDPTRPEVSGPWFLEDPAAFGVPAV 240

Query: 241 APMDIGISSSGGEMKYLTEMTVGAVEESRPPPPYPFSLFGCGF 284
           APMDIGISSSGGEMKYLTEMTVGAVEESRPPPPYPFSLFGCGF
Sbjct: 241 APMDIGISSSGGEMKYLTEMTVGAVEESRPPPPYPFSLFGCGF 283

[Close]

BLAST of CmoCh10G006520 vs. ExPASy TrEMBL
Match: A0A6J1JJX7 (heat stress transcription factor C-1-like OS=Cucurbita maxima OX=3661 GN=LOC111485256 PE=3 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 1.9e-161
Identity = 282/283 (99.65%), Postives = 283/283 (100.00%), Query Frame = 0


Query: 1   MEVNCGNDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNN 60
           MEVNCGNDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPL+FSHTLLPAFFKHNN
Sbjct: 1   MEVNCGNDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLYFSHTLLPAFFKHNN 60

Query: 61  FSSFIRQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAVKLVGVGGDMS 120
           FSSFIRQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAVKLVGVGGDMS
Sbjct: 61  FSSFIRQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAVKLVGVGGDMS 120

Query: 121 DEDLVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIMLHR 180
           DEDLVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIMLHR
Sbjct: 121 DEDLVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIMLHR 180

Query: 181 DPTHRFQIPDKKRRFMTSPSSSSPSTASFDTDEIEDDPTRPEVSGPWFLEDPAAFGVPAV 240
           DPTHRFQIPDKKRRFMTSPSSSSPSTASFDTDEIEDDPTRPEVSGPWFLEDPAAFGVPAV
Sbjct: 181 DPTHRFQIPDKKRRFMTSPSSSSPSTASFDTDEIEDDPTRPEVSGPWFLEDPAAFGVPAV 240

Query: 241 APMDIGISSSGGEMKYLTEMTVGAVEESRPPPPYPFSLFGCGF 284
           APMDIGISSSGGEMKYLTEMTVGAVEESRPPPPYPFSLFGCGF
Sbjct: 241 APMDIGISSSGGEMKYLTEMTVGAVEESRPPPPYPFSLFGCGF 283

[Close]

BLAST of CmoCh10G006520 vs. ExPASy TrEMBL
Match: A0A0A0LWD5 (HSF_DOMAIN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G240590 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.4e-108
Identity = 214/298 (71.81%), Postives = 234/298 (78.52%), Query Frame = 0


Query: 1   MEVNCG-NDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHN 60
           ME N G NDIVAPF+LKTYQMVNDPLTD  I+WGSANNSF+VLDPLHFSHTLLPAFFKHN
Sbjct: 1   MEPNSGNNDIVAPFVLKTYQMVNDPLTDPFISWGSANNSFIVLDPLHFSHTLLPAFFKHN 60

Query: 61  NFSSFIRQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAVKLVGVGGDM 120
           NFSSF+RQLNTYGFRKVDPDRWEFANEWFLRGQ+ LL+NIVRRK   N  +    VG  M
Sbjct: 61  NFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQFQLLKNIVRRKQSCNKYL----VGDQM 120

Query: 121 SDEDLVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIMLH 180
            DE+LV+EIGRLRKEQRALE QL+ MKKRLETTEKRP QMMAFLHKVVEDPEILPRIMLH
Sbjct: 121 GDEELVTEIGRLRKEQRALEEQLEGMKKRLETTEKRPQQMMAFLHKVVEDPEILPRIMLH 180

Query: 181 RDPTHRFQIPDKKRRFMTSPSSSSPSTASF-DTDEIEDDP----------TRPEVSGPWF 240
           +DPT R Q  +KKRR M S SSSSPST +  + DEIE+D           + PEV GPWF
Sbjct: 181 KDPT-RLQFAEKKRRLMISSSSSSPSTTTLTEGDEIEEDSNNQQDFGPNLSSPEVCGPWF 240

Query: 241 L---EDPAAFGVPAVAPMDIGISSSGGEMKYLTEMTVGAVEESRPPPPYPFSLFGCGF 284
           +   E      +P V  +DIGISS+GGE KYLTEMTV   E   PPPPYPFSLFGCGF
Sbjct: 241 IGEAEGNLGIPIPTVQAIDIGISSNGGERKYLTEMTV--EETYPPPPPYPFSLFGCGF 291

[Close]

BLAST of CmoCh10G006520 vs. ExPASy TrEMBL
Match: A0A1S3CJ61 (heat stress transcription factor C-1-like OS=Cucumis melo OX=3656 GN=LOC103501554 PE=3 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 4.2e-108
Identity = 212/298 (71.14%), Postives = 235/298 (78.86%), Query Frame = 0


Query: 1   MEVNCGN-DIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHN 60
           ME N  N DIVAPF+LKTYQMVNDPLTD+ I+WGSANNSF+VLDPLHFSHTLLPAFFKHN
Sbjct: 1   MEPNSSNKDIVAPFVLKTYQMVNDPLTDSFISWGSANNSFIVLDPLHFSHTLLPAFFKHN 60

Query: 61  NFSSFIRQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAVKLVGVGGDM 120
           NFSSF+RQLNTYGFRKVDPDRWEFANEWFLRGQ+ LL+NIVRRK   N  +    +G  M
Sbjct: 61  NFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQFQLLKNIVRRKQSCNKYL----IGDQM 120

Query: 121 SDEDLVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIMLH 180
            DE+LV+EI RLRKEQRALE QL+ MKKRLETTEKRP QMMAFLHKVVEDPEILPRIMLH
Sbjct: 121 GDEELVTEIARLRKEQRALEEQLEGMKKRLETTEKRPQQMMAFLHKVVEDPEILPRIMLH 180

Query: 181 RDPTHRFQIPDKKRRFMTSPSSSSPSTASF-DTDEIEDDP----------TRPEVSGPWF 240
           +DPT R Q+ +KKRR M S SSSSPST +  + DEIE+D           + PEVSGPWF
Sbjct: 181 KDPT-RLQLSEKKRRLMISSSSSSPSTTTLTEGDEIEEDSNNPQDFGPNFSSPEVSGPWF 240

Query: 241 L---EDPAAFGVPAVAPMDIGISSSGGEMKYLTEMTVGAVEESRPPPPYPFSLFGCGF 284
           L   E      +P V  +D+GISS+GGE KYLTEMTV   E   PPPPYPFSLFGCGF
Sbjct: 241 LREAEGNLGIPIPPVPAIDLGISSNGGERKYLTEMTV--EETHPPPPPYPFSLFGCGF 291

[Close]

BLAST of CmoCh10G006520 vs. ExPASy TrEMBL
Match: A0A6J1F4W8 (heat stress transcription factor C-1-like OS=Cucurbita moschata OX=3662 GN=LOC111440859 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.5e-97
Identity = 199/297 (67.00%), Postives = 224/297 (75.42%), Query Frame = 0


Query: 7   NDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNNFSSFIR 66
           NDIVAPF+LKTYQMVNDPLTDT ITWGSANNSF+VLDPLHFSHTLLPA+FKHNNFSSF+R
Sbjct: 9   NDIVAPFVLKTYQMVNDPLTDTFITWGSANNSFLVLDPLHFSHTLLPAYFKHNNFSSFVR 68

Query: 67  QLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAVKLVGVGGDMSDEDLVS 126
           QLNTYGFRKVDPDRWEFAN+WFLR Q+HLLRNIVRRK  +NS+++      +M DE+LV+
Sbjct: 69  QLNTYGFRKVDPDRWEFANQWFLRDQFHLLRNIVRRKQSTNSSLR------EMGDEELVT 128

Query: 127 EIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIMLHRDPTHRF 186
           EI RLRKEQ+ LE +L+ MKKRLETTEKRP QMMAFLHKV EDPEILPR+ML +D     
Sbjct: 129 EIARLRKEQKVLEEELEGMKKRLETTEKRPQQMMAFLHKVAEDPEILPRMMLQKDRPGA- 188

Query: 187 QIPDKKRRFMTSPSSSSPS-----TASFDTDEIEDDP------TRPEVSGP--------- 246
            I DKKRR M S SSSSPS     T S + +EIE++       + PEVSGP         
Sbjct: 189 HIGDKKRRLMISSSSSSPSTTTVTTTSLEAEEIEEEGSWRRNFSSPEVSGPAGFCNHVQG 248

Query: 247 WFLEDPAAFGVPAVAPMDIGISSSGGEMKYLTEMTVGAVEESRPPPPYPFSLFGCGF 284
           W L +  A G      MDI  S SGGEMK  TEM +G VEES P PPYPFSLFGCGF
Sbjct: 249 WNLAEAEAGG------MDISRSRSGGEMKNSTEM-MGTVEESNPAPPYPFSLFGCGF 291

[Close]

BLAST of CmoCh10G006520 vs. TAIR 10
Match: AT3G24520.1 (heat shock transcription factor C1 )

HSP 1 Score: 266.2 bits (679), Expect = 3.1e-71
Identity = 156/334 (46.71%), Postives = 194/334 (58.08%), Query Frame = 0


Query: 4   NCGNDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNNFSS 63
           N  N+++APFI+KTYQMVNDP TD  ITWG A+NSF+V+DPL FS  +LPA+FKHNNFSS
Sbjct: 9   NNNNNVIAPFIVKTYQMVNDPSTDWLITWGPAHNSFIVVDPLDFSQRILPAYFKHNNFSS 68

Query: 64  FIRQLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHCSNSAVKLVGVGGDMSDED 123
           F+RQLNTYGFRKVDPDRWEFANE FLRGQ HLL NI RRKH           G D+ D +
Sbjct: 69  FVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLNNIARRKHARGM------YGQDLEDGE 128

Query: 124 LVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILPRIMLHRDPT 183
           +V EI RL++EQR LE ++Q M +R+E TEKRP QMMAFL+KVVEDP++LPR+ML ++ T
Sbjct: 129 IVREIERLKEEQRELEAEIQRMNRRIEATEKRPEQMMAFLYKVVEDPDLLPRMMLEKERT 188

Query: 184 -HRFQIPDKKRRFMTSPSSSSPSTASFDTDEIEDD------------PTRPEVSGPWFLE 243
             + Q+ DKK+R +T       ST   + +E+E+D            P+       +   
Sbjct: 189 KQQQQVSDKKKRRVTM------STVKSEEEEVEEDEGRVFRVMSSSTPSPSSTENLYRNH 248

Query: 244 DPAAFGVPAV---------------------------------APMDI------GISSSG 284
            P  + VP                                    P  +      G  S  
Sbjct: 249 SPDGWIVPMTQGQFGSYETGLVAKSMLSNSTSSTSSSLTSTFSLPESVNGGGGGGCGSIQ 308

[Close]

BLAST of CmoCh10G006520 vs. TAIR 10
Match: AT2G26150.1 (heat shock transcription factor A2 )

HSP 1 Score: 176.4 bits (446), Expect = 3.2e-44
Identity = 99/208 (47.60%), Postives = 133/208 (63.94%), Query Frame = 0


Query: 12  PFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNNFSSFIRQLNTY 71
           PF+ KTY+MV DP TDT ++W +  NSFVV D   FS TLLP +FKH+NFSSFIRQLNTY
Sbjct: 44  PFLTKTYEMVEDPATDTVVSWSNGRNSFVVWDSHKFSTTLLPRYFKHSNFSSFIRQLNTY 103

Query: 72  GFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHC-------SNSAVKLVGVGGDMSDED- 131
           GFRK+DPDRWEFANE FL GQ HLL+NI RR++          S +  V VG    D + 
Sbjct: 104 GFRKIDPDRWEFANEGFLAGQKHLLKNIKRRRNMGLQNVNQQGSGMSCVEVGQYGFDGEV 163

Query: 132 ---------LVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVVEDPEILP 191
                    LV+E+ RLR++Q + + Q+ AM++RL  TEKR  QMM FL K + +P  + 
Sbjct: 164 ERLKRDHGVLVAEVVRLRQQQHSSKSQVAAMEQRLLVTEKRQQQMMTFLAKALNNPNFVQ 223

Query: 192 RI-MLHRDPTHRFQIP-DKKRRFMTSPS 201
           +  ++ ++    F +   +KRR  ++PS
Sbjct: 224 QFAVMSKEKKSLFGLDVGRKRRLTSTPS 251

[Close]

BLAST of CmoCh10G006520 vs. TAIR 10
Match: AT5G16820.1 (heat shock factor 3 )

HSP 1 Score: 175.6 bits (444), Expect = 5.5e-44
Identity = 101/209 (48.33%), Postives = 133/209 (63.64%), Query Frame = 0


Query: 10  VAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNNFSSFIRQLN 69
           V PF+ KTY MV+DPLT+  ++W S NNSFVV     FS  LLP +FKHNNFSSF+RQLN
Sbjct: 25  VPPFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQLN 84

Query: 70  TYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHC------------SNSAVKLVGVGG 129
           TYGFRKVDPDRWEFANE FLRG+  LL++IVRRK              S+S    V VG 
Sbjct: 85  TYGFRKVDPDRWEFANEGFLRGRKQLLKSIVRRKPSHVQQNQQQTQVQSSSVGACVEVGK 144

Query: 130 DMSDED----------LVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVV 189
              +E+          L+ E+ RLR++Q+A E+QLQ + ++++  E+R  QMM+FL K V
Sbjct: 145 FGIEEEVERLKRDKNVLMQELVRLRQQQQATENQLQNVGQKVQVMEQRQQQMMSFLAKAV 204

Query: 190 EDPEILPRIMLHRDPTHRFQIP--DKKRR 195
           + P  L +++   +     QIP  +KKRR
Sbjct: 205 QSPGFLNQLVQQNNNDGNRQIPGSNKKRR 233

[Close]

BLAST of CmoCh10G006520 vs. TAIR 10
Match: AT5G16820.2 (heat shock factor 3 )

HSP 1 Score: 175.6 bits (444), Expect = 5.5e-44
Identity = 101/209 (48.33%), Postives = 133/209 (63.64%), Query Frame = 0


Query: 10  VAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNNFSSFIRQLN 69
           V PF+ KTY MV+DPLT+  ++W S NNSFVV     FS  LLP +FKHNNFSSF+RQLN
Sbjct: 25  VPPFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQLN 84

Query: 70  TYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRKHC------------SNSAVKLVGVGG 129
           TYGFRKVDPDRWEFANE FLRG+  LL++IVRRK              S+S    V VG 
Sbjct: 85  TYGFRKVDPDRWEFANEGFLRGRKQLLKSIVRRKPSHVQQNQQQTQVQSSSVGACVEVGK 144

Query: 130 DMSDED----------LVSEIGRLRKEQRALEHQLQAMKKRLETTEKRPHQMMAFLHKVV 189
              +E+          L+ E+ RLR++Q+A E+QLQ + ++++  E+R  QMM+FL K V
Sbjct: 145 FGIEEEVERLKRDKNVLMQELVRLRQQQQATENQLQNVGQKVQVMEQRQQQMMSFLAKAV 204

Query: 190 EDPEILPRIMLHRDPTHRFQIP--DKKRR 195
           + P  L +++   +     QIP  +KKRR
Sbjct: 205 QSPGFLNQLVQQNNNDGNRQIPGSNKKRR 233

[Close]

BLAST of CmoCh10G006520 vs. TAIR 10
Match: AT4G17750.1 (heat shock factor 1 )

HSP 1 Score: 171.4 bits (433), Expect = 1.0e-42
Identity = 102/242 (42.15%), Postives = 138/242 (57.02%), Query Frame = 0


Query: 7   NDIVAPFILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNNFSSFIR 66
           N +  PF+ KTY MV DP TD  ++W   NNSF+V DP  FS  LLP +FKHNNFSSF+R
Sbjct: 47  NSLPPPFLSKTYDMVEDPATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVR 106

Query: 67  QLNTYGFRKVDPDRWEFANEWFLRGQYHLLRNIVRRK----HCSNSA------------- 126
           QLNTYGFRKVDPDRWEFANE FLRGQ HLL+ I RRK    H S+S+             
Sbjct: 107 QLNTYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRKSVQGHGSSSSNPQSQQLSQGQGS 166

Query: 127 ----VKLVGVGGDMSDED----------LVSEIGRLRKEQRALEHQLQAMKKRLETTEKR 186
                  V VG    +E+          L+ E+ +LR++Q+  +++LQ + K L+  E+R
Sbjct: 167 MAALSSCVEVGKFGLEEEVEQLKRDKNVLMQELVKLRQQQQTTDNKLQVLVKHLQVMEQR 226

Query: 187 PHQMMAFLHKVVEDPEILPR-IMLHRDPTHRFQIPDKKRRFMTSPSSSSPSTASFDTDEI 217
             Q+M+FL K V++P  L + I    D        +KKRR     ++++ S +   + E 
Sbjct: 227 QQQIMSFLAKAVQNPTFLSQFIQKQTDSNMHVTEANKKRRLREDSTAATESNSHSHSLEA 286

The following BLAST results are available for this feature:

BLAST of CmoCh10G006520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LV52	4.4e-70	46.71	Heat stress transcription factor C-1 OS=Arabidopsis thaliana OX=3702 GN=HSFC1 PE...	[more]
Q6EUG4	3.2e-49	56.02	Heat stress transcription factor C-2a OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0DBL6	1.2e-46	55.56	Heat stress transcription factor C-2b OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q6VBA4	3.7e-45	47.83	Heat stress transcription factor C-1a OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q942D6	8.3e-45	53.41	Heat stress transcription factor C-1b OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of CmoCh10G006520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H8H5	3.9e-162	100.00	heat stress transcription factor C-1-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JJX7	1.9e-161	99.65	heat stress transcription factor C-1-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0LWD5	1.4e-108	71.81	HSF_DOMAIN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G240590 ...	[more]
A0A1S3CJ61	4.2e-108	71.14	heat stress transcription factor C-1-like OS=Cucumis melo OX=3656 GN=LOC10350155...	[more]
A0A6J1F4W8	1.5e-97	67.00	heat stress transcription factor C-1-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of CmoCh10G006520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24520.1	3.1e-71	46.71	heat shock transcription factor C1	[more]
AT2G26150.1	3.2e-44	47.60	heat shock transcription factor A2	[more]
AT5G16820.1	5.5e-44	48.33	heat shock factor 3	[more]
AT5G16820.2	5.5e-44	48.33	heat shock factor 3	[more]
AT4G17750.1	1.0e-42	42.15	heat shock factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 128..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..209
None	No IPR available	PANTHER	PTHR10015:SF332	HEAT STRESS TRANSCRIPTION FACTOR C-1	coord: 11..215
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PRINTS	PR00056	HSFDOMAIN	coord: 64..76 score: 84.18 coord: 51..63 score: 72.31 coord: 13..36 score: 37.86
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 9..102 e-value: 1.6E-47 score: 173.9
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 13..102 e-value: 2.4E-28 score: 98.6
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PROSITE	PS00434	HSF_DOMAIN	coord: 52..76
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 6..103 e-value: 2.2E-33 score: 116.8
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 11..215
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 10..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G006520.1	CmoCh10G006520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034605	cellular response to heat
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding