CmoCh10G006190 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACTAATCTCTTCACTTTTGCCCCCACCAGCATCCGTGCCTGTGCCTCCTCCGCCGACCATAACCGCCGAAAAGCCTCCTCCTCCTCCTCCTCCTCCTCCAATTGGTGGGCCCCGGTCTTCGGATGGTCCTCCGAACCGGACTACATCGACTCCGGCAACAAATCCAACCCTAAAAACCTAGCCGACGGAGTTTCAAAATCAGATCCAGAGACGAAATCGTCGAGAAATCGATTTTCCCCCGGCTGCTTCACGGAGTCGAAGGCACGACAGCTTCGCCTGATGACGATGGAAACGGAATCATTTCACGATGTTATGTACCACTCAGCAATCGCATCTCGCCTCGCTACCGACTTCAAAAGTCGCGGCGATTCCTGA ATGGCGACTAATCTCTTCACTTTTGCCCCCACCAGCATCCGTGCCTGTGCCTCCTCCGCCGACCATAACCGCCGAAAAGCCTCCTCCTCCTCCTCCTCCTCCTCCAATTGGTGGGCCCCGGTCTTCGGATGGTCCTCCGAACCGGACTACATCGACTCCGGCAACAAATCCAACCCTAAAAACCTAGCCGACGGAGTTTCAAAATCAGATCCAGAGACGAAATCGTCGAGAAATCGATTTTCCCCCGGCTGCTTCACGGAGTCGAAGGCACGACAGCTTCGCCTGATGACGATGGAAACGGAATCATTTCACGATGTTATGTACCACTCAGCAATCGCATCTCGCCTCGCTACCGACTTCAAAAGTCGCGGCGATTCCTGA ATGGCGACTAATCTCTTCACTTTTGCCCCCACCAGCATCCGTGCCTGTGCCTCCTCCGCCGACCATAACCGCCGAAAAGCCTCCTCCTCCTCCTCCTCCTCCTCCAATTGGTGGGCCCCGGTCTTCGGATGGTCCTCCGAACCGGACTACATCGACTCCGGCAACAAATCCAACCCTAAAAACCTAGCCGACGGAGTTTCAAAATCAGATCCAGAGACGAAATCGTCGAGAAATCGATTTTCCCCCGGCTGCTTCACGGAGTCGAAGGCACGACAGCTTCGCCTGATGACGATGGAAACGGAATCATTTCACGATGTTATGTACCACTCAGCAATCGCATCTCGCCTCGCTACCGACTTCAAAAGTCGCGGCGATTCCTGA MATNLFTFAPTSIRACASSADHNRRKASSSSSSSSNWWAPVFGWSSEPDYIDSGNKSNPKNLADGVSKSDPETKSSRNRFSPGCFTESKARQLRLMTMETESFHDVMYHSAIASRLATDFKSRGDS Homology
BLAST of CmoCh10G006190 vs. ExPASy TrEMBL
Match: A0A6J1HBD8 (uncharacterized protein LOC111461308 OS=Cucurbita moschata OX=3662 GN=LOC111461308 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 2.6e-62 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CmoCh10G006190 vs. ExPASy TrEMBL
Match: A0A6J1JBM9 (uncharacterized protein LOC111485309 OS=Cucurbita maxima OX=3661 GN=LOC111485309 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 9.7e-57 Identity = 118/126 (93.65%), Postives = 120/126 (95.24%), Query Frame = 0
BLAST of CmoCh10G006190 vs. ExPASy TrEMBL
Match: A0A0A0LTN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G303705 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 5.0e-45 Identity = 98/126 (77.78%), Postives = 105/126 (83.33%), Query Frame = 0
BLAST of CmoCh10G006190 vs. ExPASy TrEMBL
Match: A0A5D3CSV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00250 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.7e-43 Identity = 100/131 (76.34%), Postives = 107/131 (81.68%), Query Frame = 0
BLAST of CmoCh10G006190 vs. ExPASy TrEMBL
Match: A0A1S4E4Y4 (uncharacterized protein LOC103502747 OS=Cucumis melo OX=3656 GN=LOC103502747 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.7e-43 Identity = 100/131 (76.34%), Postives = 107/131 (81.68%), Query Frame = 0
BLAST of CmoCh10G006190 vs. TAIR 10
Match: AT1G52720.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 86.3 bits (212), Expect = 2.0e-17 Identity = 55/127 (43.31%), Postives = 71/127 (55.91%), Query Frame = 0
BLAST of CmoCh10G006190 vs. TAIR 10
Match: AT3G15630.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 83.6 bits (205), Expect = 1.3e-16 Identity = 61/121 (50.41%), Postives = 76/121 (62.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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