Homology
BLAST of CmoCh10G006080 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 976.5 bits (2523), Expect = 1.7e-283
Identity = 466/740 (62.97%), Postives = 591/740 (79.86%), Query Frame = 0
Query: 1 MATSAPSLVLSPTSP------SSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGL 60
M + +P V S + P SSDPPY +++HPSL L+ C+++++LR IHAQ+IK GL
Sbjct: 2 MLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGL 61
Query: 61 HNTQFALSKLIEFSAVS-RYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVF 120
HNT +ALSKLIEF +S + + YA+S+F +I+EPNL IWN+M RG ++S PV AL
Sbjct: 62 HNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKL 121
Query: 121 FVRMIHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQ 180
+V MI G+ PNSYTFPF+LKSCAK + +EG+QIH HVLKLG D+++HTSLI+MY Q
Sbjct: 122 YVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQ 181
Query: 181 SGEINYAQLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGY 240
+G + A VFD+S RD +S+TALI GY GY++ A+KLFDE+PV+DVVSWNAMI+GY
Sbjct: 182 NGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGY 241
Query: 241 AQTGRSKEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNL 300
A+TG KEAL LF++M K NV P+EST+V+V+SACAQS +++LG + WI+D G SNL
Sbjct: 242 AETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNL 301
Query: 301 KLVNALIDMYSKCGDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLAS 360
K+VNALID+YSKCG+L+TA LF+ +P +DVISWN +IGGYTHM YKEAL LF+EML S
Sbjct: 302 KIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361
Query: 361 GIEPTDITFLNVLPSCACLGAIDVGKWIHAYINKNFNSA--STSLWTSLIDMYAKCGNID 420
G P D+T L++LP+CA LGAID+G+WIH YI+K ++SL TSLIDMYAKCG+I+
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 421
Query: 421 AARQVFNGMNFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACK 480
AA QVFN + KSL+SWNAMI G AMHG+A+ + +LFS+M GI+P++ITFVG+LSAC
Sbjct: 422 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 481
Query: 481 HAGFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIW 540
H+G +DLGR F +M QDYK++PK +HYGCMIDLLG +GLF+EAE +I MEM+PDG IW
Sbjct: 482 HSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIW 541
Query: 541 GSLLGACRDHGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDK 600
SLL AC+ HG VELGE AE L ++EP+NPG+YVLLSNIYA AG+W++VA+ R LNDK
Sbjct: 542 CSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDK 601
Query: 601 GMKKVPGCTTIEVDNVVHEFLVGDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDM 660
GMKKVPGC++IE+D+VVHEF++GDK H ++ IY MLEE++ L++ GFVPDTSEVL +M
Sbjct: 602 GMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEM 661
Query: 661 DEEWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIA 720
+EEWKEGAL HHSEKLAIAFGLISTKPGT +TI+KNLRVCRNCH ATKLISKI+ REIIA
Sbjct: 662 EEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIA 721
Query: 721 RDRNRFHHFKDGSCSCNDYW 732
RDR RFHHF+DG CSCNDYW
Sbjct: 722 RDRTRFHHFRDGVCSCNDYW 741
BLAST of CmoCh10G006080 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 598.6 bits (1542), Expect = 9.6e-170
Identity = 305/765 (39.87%), Postives = 458/765 (59.87%), Query Frame = 0
Query: 2 ATSAP-SLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 61
+T+ P SL P + + P + + LI +C S+R L+Q H +I+TG + ++
Sbjct: 5 STAQPLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYS 64
Query: 62 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMI-H 121
SKL +A+S +A + YA +F+ I +PN F WN++IR + PVL++ F+ M+
Sbjct: 65 ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE 124
Query: 122 AGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEINY 181
+ PN YTFPFL+K+ A+++S G+ +H +K SDVF+ SLI+ Y G+
Sbjct: 125 SQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD--- 184
Query: 182 AQLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGYAQTGRS 241
+D A K+F + +DVVSWN+MI G+ Q G
Sbjct: 185 ----------------------------LDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 244
Query: 242 KEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNAL 301
+AL LF++M +V + T+V VLSACA+ L+ G + S+IE+ + NL L NA+
Sbjct: 245 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 304
Query: 302 IDMYSKCGDLQTARELFD-------------------------------EMPERDVISWN 361
+DMY+KCG ++ A+ LFD MP++D+++WN
Sbjct: 305 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 364
Query: 362 VMIGGYTHMCSYKEALALFREM-LASGIEPTDITFLNVLPSCACLGAIDVGKWIHAYINK 421
+I Y EAL +F E+ L ++ IT ++ L +CA +GA+++G+WIH+YI K
Sbjct: 365 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 424
Query: 422 NFNSASTSLWTSLIDMYAKCGNIDAARQVFNGMNFKSLASWNAMICGLAMHGQANEALEL 481
+ + + ++LI MY+KCG+++ +R+VFN + + + W+AMI GLAMHG NEA+++
Sbjct: 425 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 484
Query: 482 FSKMSSDGIEPNEITFVGVLSACKHAGFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLG 541
F KM ++PN +TF V AC H G VD F M +Y I P+ +HY C++D+LG
Sbjct: 485 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLG 544
Query: 542 RAGLFEEAESLIQNMEMKPDGAIWGSLLGACRDHGRVELGEIVAERLFELEPDNPGAYVL 601
R+G E+A I+ M + P ++WG+LLGAC+ H + L E+ RL ELEP N GA+VL
Sbjct: 545 RSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVL 604
Query: 602 LSNIYAGAGKWDDVARIRTKLNDKGMKKVPGCTTIEVDNVVHEFLVGDKVHLQSENIYKM 661
LSNIYA GKW++V+ +R + G+KK PGC++IE+D ++HEFL GD H SE +Y
Sbjct: 605 LSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGK 664
Query: 662 LEEVDRQLKEFGFVPDTSEVLYDM-DEEWKEGALSHHSEKLAIAFGLISTKPGTPITIIK 721
L EV +LK G+ P+ S+VL + +EE KE +L+ HSEKLAI +GLIST+ I +IK
Sbjct: 665 LHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIK 724
Query: 722 NLRVCRNCHAATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 732
NLRVC +CH+ KLIS++++REII RDR RFHHF++G CSCND+W
Sbjct: 725 NLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of CmoCh10G006080 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 568.2 bits (1463), Expect = 1.4e-160
Identity = 288/700 (41.14%), Postives = 430/700 (61.43%), Query Frame = 0
Query: 32 LISKCRSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSAVSRYADISYAVSLFNSIEEPNL 91
LI L+QIHA+++ GL + F ++KLI A S + DI++A +F+ + P +
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQI 86
Query: 92 FIWNSMIRGLSISLSPVLALVFFVRMIHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAH 151
F WN++IRG S + AL+ + M A V P+S+TFP LLK+C+ L+ + G+ +HA
Sbjct: 87 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 146
Query: 152 VLKLGFVSDVFIHTSLINMYAQSGEINYAQLVFDQSNFRDAISFTALIAGYVLWGYMDRA 211
V +LGF +DVF+ LI +YA+ + A+ VF+
Sbjct: 147 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL------------------------ 206
Query: 212 RKLFDEMPVRDVVSWNAMIAGYAQTGRSKEALLLFEEMRKANVPPNESTIVSVLSACAQS 271
+P R +VSW A+++ YAQ G EAL +F +MRK +V P+ +VSVL+A
Sbjct: 207 -----PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 266
Query: 272 NALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDEMPERDVISWNVMI 331
L G S+ + + GL L+ +L MY+KCG + TA+ LFD+M ++I WN MI
Sbjct: 267 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 326
Query: 332 GGYTHMCSYKEALALFREMLASGIEPTDITFLNVLPSCACLGAIDVGKWIHAYINKNFNS 391
GY +EA+ +F EM+ + P I+ + + +CA +G+++ + ++ Y+ ++
Sbjct: 327 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 386
Query: 392 ASTSLWTSLIDMYAKCGNIDAARQVFNGMNFKSLASWNAMICGLAMHGQANEALELFSKM 451
+ ++LIDM+AKCG+++ AR VF+ + + W+AMI G +HG+A EA+ L+ M
Sbjct: 387 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 446
Query: 452 SSDGIEPNEITFVGVLSACKHAGFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGL 511
G+ PN++TF+G+L AC H+G V G FF+ M D+KI+P+ QHY C+IDLLGRAG
Sbjct: 447 ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGH 506
Query: 512 FEEAESLIQNMEMKPDGAIWGSLLGACRDHGRVELGEIVAERLFELEPDNPGAYVLLSNI 571
++A +I+ M ++P +WG+LL AC+ H VELGE A++LF ++P N G YV LSN+
Sbjct: 507 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 566
Query: 572 YAGAGKWDDVARIRTKLNDKGMKKVPGCTTIEVDNVVHEFLVGDKVHLQSENIYKMLEEV 631
YA A WD VA +R ++ +KG+ K GC+ +EV + F VGDK H + E I + +E +
Sbjct: 567 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 626
Query: 632 DRQLKEFGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVC 691
+ +LKE GFV + L+D+++E E L HSE++AIA+GLIST GTP+ I KNLR C
Sbjct: 627 ESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRAC 686
Query: 692 RNCHAATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 732
NCHAATKLISK+ +REI+ RD NRFHHFKDG CSC DYW
Sbjct: 687 VNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
BLAST of CmoCh10G006080 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 563.9 bits (1452), Expect = 2.6e-159
Identity = 291/804 (36.19%), Postives = 450/804 (55.97%), Query Frame = 0
Query: 33 ISKCRSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSA-VSRYADISYAVSLF-NSIEEPN 92
+ C++I L+ H + K GL N ++KL+ S + +S+A +F NS
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 93 LFIWNSMIRGLSISLSPVLALVFFVRMIHAGVEPNSYTFPFLLKSCAKLASAREGKQIHA 152
F++NS+IRG + S A++ F+RM+++G+ P+ YTFPF L +CAK + G QIH
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 153 HVLKLGFVSDVFIHTSLINMYAQSGEINYAQLVFDQSNFRDAISFTALIAGYVLWGY--- 212
++K+G+ D+F+ SL++ YA+ GE++ A+ VFD+ + R+ +S+T++I GY +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 213 ------------------------------------------------------------ 272
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 273 --------MDRARKLFDEMPVRDVVSWNAMIAGYAQTGRSKEALLLFEEMRKANVPPNES 332
+D A++LFDE ++ NAM + Y + G ++EAL +F M + V P+
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 333 TIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKC------------- 392
+++S +S+C+Q + G S ++ G S + NALIDMY KC
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 393 ------------------GDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFR 452
G++ A E F+ MPE++++SWN +I G ++EA+ +F
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 453 EMLA-SGIEPTDITFLNVLPSCACLGAIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKC 512
M + G+ +T +++ +C LGA+D+ KWI+ YI KN L T+L+DM+++C
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 513 GNIDAARQVFNGMNFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVL 572
G+ ++A +FN + + +++W A I +AM G A A+ELF M G++P+ + FVG L
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 573 SACKHAGFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPD 632
+AC H G V G+ F SM++ + +SP+ HYGCM+DLLGRAGL EEA LI++M M+P+
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 633 GAIWGSLLGACRDHGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTK 692
IW SLL ACR G VE+ AE++ L P+ G+YVLLSN+YA AG+W+D+A++R
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 693 LNDKGMKKVPGCTTIEVDNVVHEFLVGDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEV 732
+ +KG++K PG ++I++ HEF GD+ H + NI ML+EV ++ G VPD S V
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
BLAST of CmoCh10G006080 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 563.9 bits (1452), Expect = 2.6e-159
Identity = 284/724 (39.23%), Postives = 446/724 (61.60%), Query Frame = 0
Query: 19 PPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSAVSRYADISY 78
PP + L+ +S C+S+ ++Q+HA I++T +++ S L S S ++SY
Sbjct: 5 PPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHK--LNSFLFNLSVSSSSINLSY 64
Query: 79 AVSLFNSI-EEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHAGVEPNSYTFPFLLKSCA 138
A+++F+SI P ++N +R LS S P ++F+ R+ H G + ++F +LK+ +
Sbjct: 65 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 124
Query: 139 KLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEINYAQLVFDQSNFRDAISFTA 198
K+++ EG ++H K+ + D F+ T ++MYA G INYA+ VFD+ + RD +++
Sbjct: 125 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 184
Query: 199 LIAGYVLWGYMDRARKLFDEMPVRDVVSWNA----MIAGYAQTGRSKEALLLFEEMRKAN 258
+I Y +G +D A KLF+EM +V+ +++ +TG + ++E + + +
Sbjct: 185 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 244
Query: 259 VPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTAR 318
V + + ++++ A + +D+ + R NL + A++ YSKCG L A+
Sbjct: 245 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR----NLFVSTAMVSGYSKCGRLDDAQ 304
Query: 319 ELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLASGIEPTDITFLNVLPSCACLG 378
+FD+ ++D++ W MI Y +EAL +F EM SGI+P ++ +V+ +CA LG
Sbjct: 305 VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLG 364
Query: 379 AIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIDAARQVFNGMNFKSLASWNAMIC 438
+D KW+H+ I+ N + S+ +LI+MYAKCG +DA R VF M +++ SW++MI
Sbjct: 365 ILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMIN 424
Query: 439 GLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACKHAGFVDLGRLFFSSMIQDYKIS 498
L+MHG+A++AL LF++M + +EPNE+TFVGVL C H+G V+ G+ F+SM +Y I+
Sbjct: 425 ALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT 484
Query: 499 PKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLGACRDHGRVELGEIVAER 558
PK +HYGCM+DL GRA L EA +I++M + + IWGSL+ ACR HG +ELG+ A+R
Sbjct: 485 PKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKR 544
Query: 559 LFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDKGMKKVPGCTTIEVDNVVHEFLV 618
+ ELEPD+ GA VL+SNIYA +W+DV IR + +K + K G + I+ + HEFL+
Sbjct: 545 ILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLI 604
Query: 619 GDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAFGL 678
GDK H QS IY L+EV +LK G+VPD VL D++EE K+ + HSEKLA+ FGL
Sbjct: 605 GDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGL 664
Query: 679 ISTKPGTP------ITIIKNLRVCRNCHAATKLISKIFNREIIARDRNRFHHFKDGSCSC 732
++ + I I+KNLRVC +CH KL+SK++ REII RDR RFH +K+G CSC
Sbjct: 665 MNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSC 722
BLAST of CmoCh10G006080 vs. ExPASy TrEMBL
Match:
A0A6J1HAU9 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111461670 PE=3 SV=1)
HSP 1 Score: 1480.3 bits (3831), Expect = 0.0e+00
Identity = 731/731 (100.00%), Postives = 731/731 (100.00%), Query Frame = 0
Query: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA
Sbjct: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
Query: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA 120
LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA
Sbjct: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA 120
Query: 121 GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEINYA 180
GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEINYA
Sbjct: 121 GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEINYA 180
Query: 181 QLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGYAQTGRSK 240
QLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGYAQTGRSK
Sbjct: 181 QLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGYAQTGRSK 240
Query: 241 EALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALI 300
EALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALI
Sbjct: 241 EALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALI 300
Query: 301 DMYSKCGDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLASGIEPTDI 360
DMYSKCGDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLASGIEPTDI
Sbjct: 301 DMYSKCGDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLASGIEPTDI 360
Query: 361 TFLNVLPSCACLGAIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIDAARQVFNGM 420
TFLNVLPSCACLGAIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIDAARQVFNGM
Sbjct: 361 TFLNVLPSCACLGAIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIDAARQVFNGM 420
Query: 421 NFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACKHAGFVDLGR 480
NFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACKHAGFVDLGR
Sbjct: 421 NFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACKHAGFVDLGR 480
Query: 481 LFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLGACRD 540
LFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLGACRD
Sbjct: 481 LFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLGACRD 540
Query: 541 HGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDKGMKKVPGCT 600
HGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDKGMKKVPGCT
Sbjct: 541 HGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDKGMKKVPGCT 600
Query: 601 TIEVDNVVHEFLVGDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDEEWKEGAL 660
TIEVDNVVHEFLVGDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDEEWKEGAL
Sbjct: 601 TIEVDNVVHEFLVGDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDEEWKEGAL 660
Query: 661 SHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARDRNRFHHF 720
SHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARDRNRFHHF
Sbjct: 661 SHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARDRNRFHHF 720
Query: 721 KDGSCSCNDYW 732
KDGSCSCNDYW
Sbjct: 721 KDGSCSCNDYW 731
BLAST of CmoCh10G006080 vs. ExPASy TrEMBL
Match:
A0A6J1JHE6 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111485125 PE=3 SV=1)
HSP 1 Score: 1457.6 bits (3772), Expect = 0.0e+00
Identity = 720/731 (98.50%), Postives = 725/731 (99.18%), Query Frame = 0
Query: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA
Sbjct: 1 MATSAPSLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 60
Query: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHA 120
LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFF RMIHA
Sbjct: 61 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFARMIHA 120
Query: 121 GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEINYA 180
GVEPNSYTFPFLLKSCA+LASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEINYA
Sbjct: 121 GVEPNSYTFPFLLKSCARLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEINYA 180
Query: 181 QLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGYAQTGRSK 240
QLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGYAQTGRSK
Sbjct: 181 QLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGYAQTGRSK 240
Query: 241 EALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALI 300
EALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGL SNLKLVNALI
Sbjct: 241 EALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNLKLVNALI 300
Query: 301 DMYSKCGDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLASGIEPTDI 360
DMYSKCG LQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLASGIEPTDI
Sbjct: 301 DMYSKCGALQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLASGIEPTDI 360
Query: 361 TFLNVLPSCACLGAIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIDAARQVFNGM 420
TFLNVLPSCACLGAID+GKWIHAYINKNFNSASTSLWTSLIDMYAKCGNI+AARQVFNGM
Sbjct: 361 TFLNVLPSCACLGAIDLGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIEAARQVFNGM 420
Query: 421 NFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACKHAGFVDLGR 480
N KSLASWNAMICGLAMHGQANEALELFSK++SDGIEPNEITFVGVLSACKHAGFVDLGR
Sbjct: 421 NIKSLASWNAMICGLAMHGQANEALELFSKLTSDGIEPNEITFVGVLSACKHAGFVDLGR 480
Query: 481 LFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLGACRD 540
LFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLGACRD
Sbjct: 481 LFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLGACRD 540
Query: 541 HGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDKGMKKVPGCT 600
HGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVA IRTKLNDKGMKKVPGCT
Sbjct: 541 HGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVATIRTKLNDKGMKKVPGCT 600
Query: 601 TIEVDNVVHEFLVGDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDEEWKEGAL 660
TIEVDNVVHEFLVGDKVH QSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDEEWKEGAL
Sbjct: 601 TIEVDNVVHEFLVGDKVHPQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDEEWKEGAL 660
Query: 661 SHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARDRNRFHHF 720
SHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARDRNRFHHF
Sbjct: 661 SHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARDRNRFHHF 720
Query: 721 KDGSCSCNDYW 732
KDGSCSCNDYW
Sbjct: 721 KDGSCSCNDYW 731
BLAST of CmoCh10G006080 vs. ExPASy TrEMBL
Match:
A0A0A0LU28 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G306800 PE=3 SV=1)
HSP 1 Score: 1360.9 bits (3521), Expect = 0.0e+00
Identity = 667/734 (90.87%), Postives = 704/734 (95.91%), Query Frame = 0
Query: 1 MATSAPSLVLSPT---SPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNT 60
MA S+PSL+LSP+ PSSDPPYR+LQ+HPSLKL+SKC+SIRT +QIHA IIKTGLHNT
Sbjct: 1 MALSSPSLLLSPSFHVLPSSDPPYRVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNT 60
Query: 61 QFALSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRM 120
FALSKLIEFSAVSR DISYA+SLFNSIEEPNLFIWNSMIRGLS+SLSP LALVFFVRM
Sbjct: 61 LFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRM 120
Query: 121 IHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEI 180
I++GVEPNSYTFPFLLKSCAKLASA EGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGE+
Sbjct: 121 IYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEM 180
Query: 181 NYAQLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGYAQTG 240
N AQLVFDQSNFRDAISFTALIAGY LWGYMDRAR+LFDEMPV+DVVSWNAMIAGYAQ G
Sbjct: 181 NNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMG 240
Query: 241 RSKEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVN 300
RSKEALLLFE+MRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVN
Sbjct: 241 RSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVN 300
Query: 301 ALIDMYSKCGDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLASGIEP 360
ALIDMYSKCGDLQTARELFD+M ERDVISWNVMIGGYTHMCSYKEALALFREMLASG+EP
Sbjct: 301 ALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEP 360
Query: 361 TDITFLNVLPSCACLGAIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIDAARQVF 420
T+ITFL++LPSCA LGAID+GKWIHAYINKNFNS STSL TSLID+YAKCGNI AARQVF
Sbjct: 361 TEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVF 420
Query: 421 NGMNFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACKHAGFVD 480
+GM KSLASWNAMICGLAMHGQA++A ELFSKMSSDGIEPNEITFVG+LSACKHAG VD
Sbjct: 421 DGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVD 480
Query: 481 LGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLGA 540
LG+ FFSSM+QDYKISPKSQHYGCMIDLLGRAGLFEEAESL+QNME+KPDGAIWGSLLGA
Sbjct: 481 LGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGA 540
Query: 541 CRDHGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDKGMKKVP 600
CRDHGRVELGE+VAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRT+LND+GMKKVP
Sbjct: 541 CRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVP 600
Query: 601 GCTTIEVDNVVHEFLVGDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDEEWKE 660
GCTTIEVDNVVHEFLVGDKVH QSE+IY+MLEEVD QLK FGFV DTSEVLYDMDEEWKE
Sbjct: 601 GCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKE 660
Query: 661 GALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARDRNRF 720
GALSHHSEKLAIAFGLISTKPGTPI IIKNLRVCRNCH+ATKLISKIFNREIIARDRNRF
Sbjct: 661 GALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRF 720
Query: 721 HHFKDGSCSCNDYW 732
HHFKDGSCSCNDYW
Sbjct: 721 HHFKDGSCSCNDYW 734
BLAST of CmoCh10G006080 vs. ExPASy TrEMBL
Match:
A0A5A7TTJ1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00470 PE=3 SV=1)
HSP 1 Score: 1357.0 bits (3511), Expect = 0.0e+00
Identity = 665/734 (90.60%), Postives = 703/734 (95.78%), Query Frame = 0
Query: 1 MATSAPSLVLSPT---SPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNT 60
MA S+PSL+LSP+ PSSDPPYR+LQ+HP+LKL+SKC++IRT +QIHA IIKTGLHNT
Sbjct: 1 MALSSPSLLLSPSFHVLPSSDPPYRVLQEHPALKLLSKCQNIRTFKQIHAHIIKTGLHNT 60
Query: 61 QFALSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRM 120
FALSKLIEFSAVSR DISYA+SLF+SIE+PNLFIWNSMIRGLS+SLSPVLALVFFVRM
Sbjct: 61 HFALSKLIEFSAVSRSGDISYAISLFSSIEDPNLFIWNSMIRGLSMSLSPVLALVFFVRM 120
Query: 121 IHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEI 180
I++GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGE+
Sbjct: 121 IYSGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEM 180
Query: 181 NYAQLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGYAQTG 240
N AQL+FDQSNFRDAISFTALIAGY LWGYMDRAR+LFDEMPV+DVVSWNAMIAGYAQ G
Sbjct: 181 NNAQLIFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMG 240
Query: 241 RSKEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVN 300
RSKEALLLFE+MRK NVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGL SNLKLVN
Sbjct: 241 RSKEALLLFEDMRKENVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNLKLVN 300
Query: 301 ALIDMYSKCGDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLASGIEP 360
ALIDMYSKCGDL TARELFD+MPERDVISWNVMIGGYTHMCSYKEALALFREMLASG+EP
Sbjct: 301 ALIDMYSKCGDLPTARELFDDMPERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEP 360
Query: 361 TDITFLNVLPSCACLGAIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIDAARQVF 420
T+ITFL++LPSCA LGAID+GKWIHAYINKNFNS STSL TSLID+YAKCGNI AARQVF
Sbjct: 361 TEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVF 420
Query: 421 NGMNFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACKHAGFVD 480
+GMN KSLASWNAMICGLAMHGQA+EA ELFSKMSSDGIEPNEITFVGVLSACKHAG VD
Sbjct: 421 DGMNIKSLASWNAMICGLAMHGQADEAFELFSKMSSDGIEPNEITFVGVLSACKHAGLVD 480
Query: 481 LGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLGA 540
LG FSSM+QDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNME+KPDGAIWGSLLGA
Sbjct: 481 LGHQIFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEVKPDGAIWGSLLGA 540
Query: 541 CRDHGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDKGMKKVP 600
CRDHGRVELGE+VAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRT+LND+GMKKVP
Sbjct: 541 CRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVP 600
Query: 601 GCTTIEVDNVVHEFLVGDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDEEWKE 660
GCTTIEVDNVVHEFLVGDKVH QSE+IYKMLEEVD+QLK FGFV DTSEVLYDMDEEWKE
Sbjct: 601 GCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKVFGFVADTSEVLYDMDEEWKE 660
Query: 661 GALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIARDRNRF 720
G LSHHSEKLAIAFGLISTKPGTPI IIKNLRVCRNCH+ATKLISKIFNREIIARDRNRF
Sbjct: 661 GTLSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRF 720
Query: 721 HHFKDGSCSCNDYW 732
HHFKDGSCSCNDYW
Sbjct: 721 HHFKDGSCSCNDYW 734
BLAST of CmoCh10G006080 vs. ExPASy TrEMBL
Match:
A0A1S3CMX0 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502738 PE=3 SV=1)
HSP 1 Score: 1246.5 bits (3224), Expect = 0.0e+00
Identity = 614/681 (90.16%), Postives = 651/681 (95.59%), Query Frame = 0
Query: 1 MATSAPSLVLSPT---SPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNT 60
MA S+PSL+LSP+ PSSDPPYR+LQ+HP+LKL+SKC++IRT +QIHA IIKTGLHNT
Sbjct: 1 MALSSPSLLLSPSFHVLPSSDPPYRVLQEHPALKLLSKCQNIRTFKQIHAHIIKTGLHNT 60
Query: 61 QFALSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRM 120
FALSKLIEFSAVSR DISYA+SLF+SIE+PNLFIWNSMIRGLS+SLSPVLALVFFVRM
Sbjct: 61 HFALSKLIEFSAVSRSGDISYAISLFSSIEDPNLFIWNSMIRGLSMSLSPVLALVFFVRM 120
Query: 121 IHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEI 180
I++GVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGE+
Sbjct: 121 IYSGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEM 180
Query: 181 NYAQLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGYAQTG 240
N AQL+FDQSNFRDAISFTALIAGY LWGYMDRAR+LFDEMPV+DVVSWNAMIAGYAQ G
Sbjct: 181 NNAQLIFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMG 240
Query: 241 RSKEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVN 300
RSKEALLLFE+MRK NVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGL SNLKLVN
Sbjct: 241 RSKEALLLFEDMRKENVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLRSNLKLVN 300
Query: 301 ALIDMYSKCGDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLASGIEP 360
ALIDMYSKCGDL TARELFD+MPERDVISWNVMIGGYTHMCSYKEALALFREMLASG+EP
Sbjct: 301 ALIDMYSKCGDLPTARELFDDMPERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEP 360
Query: 361 TDITFLNVLPSCACLGAIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIDAARQVF 420
T+ITFL++LPSCA LGAID+GKWIHAYINKNFNS STSL TSLID+YAKCGNI AARQVF
Sbjct: 361 TEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVF 420
Query: 421 NGMNFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACKHAGFVD 480
+GMN KSLASWNAMICGLAMHGQA+EA ELFSKMSSDGIEPNEITFVGVLSACKHAG VD
Sbjct: 421 DGMNIKSLASWNAMICGLAMHGQADEAFELFSKMSSDGIEPNEITFVGVLSACKHAGLVD 480
Query: 481 LGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLGA 540
LG FSSM+QDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNME+KPDGAIWGSLLGA
Sbjct: 481 LGHQIFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEVKPDGAIWGSLLGA 540
Query: 541 CRDHGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDKGMKKVP 600
CRDHGRVELGE+VAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRT+LND+GMKKVP
Sbjct: 541 CRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVP 600
Query: 601 GCTTIEVDNVVHEFLVGDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDEEWKE 660
GCTTIEVDNVVHEFLVGDKVH QSE+IYKMLEEVD+QLK FGFV DTSEVLYDMDEEWKE
Sbjct: 601 GCTTIEVDNVVHEFLVGDKVHPQSEDIYKMLEEVDKQLKVFGFVADTSEVLYDMDEEWKE 660
Query: 661 GALSHHSEKLAIAFGLISTKP 679
G LSHHSEKLAIAFGLISTKP
Sbjct: 661 GTLSHHSEKLAIAFGLISTKP 681
BLAST of CmoCh10G006080 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 976.5 bits (2523), Expect = 1.2e-284
Identity = 466/740 (62.97%), Postives = 591/740 (79.86%), Query Frame = 0
Query: 1 MATSAPSLVLSPTSP------SSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGL 60
M + +P V S + P SSDPPY +++HPSL L+ C+++++LR IHAQ+IK GL
Sbjct: 2 MLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGL 61
Query: 61 HNTQFALSKLIEFSAVS-RYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVF 120
HNT +ALSKLIEF +S + + YA+S+F +I+EPNL IWN+M RG ++S PV AL
Sbjct: 62 HNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKL 121
Query: 121 FVRMIHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQ 180
+V MI G+ PNSYTFPF+LKSCAK + +EG+QIH HVLKLG D+++HTSLI+MY Q
Sbjct: 122 YVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQ 181
Query: 181 SGEINYAQLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGY 240
+G + A VFD+S RD +S+TALI GY GY++ A+KLFDE+PV+DVVSWNAMI+GY
Sbjct: 182 NGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGY 241
Query: 241 AQTGRSKEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNL 300
A+TG KEAL LF++M K NV P+EST+V+V+SACAQS +++LG + WI+D G SNL
Sbjct: 242 AETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNL 301
Query: 301 KLVNALIDMYSKCGDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLAS 360
K+VNALID+YSKCG+L+TA LF+ +P +DVISWN +IGGYTHM YKEAL LF+EML S
Sbjct: 302 KIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361
Query: 361 GIEPTDITFLNVLPSCACLGAIDVGKWIHAYINKNFNSA--STSLWTSLIDMYAKCGNID 420
G P D+T L++LP+CA LGAID+G+WIH YI+K ++SL TSLIDMYAKCG+I+
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 421
Query: 421 AARQVFNGMNFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACK 480
AA QVFN + KSL+SWNAMI G AMHG+A+ + +LFS+M GI+P++ITFVG+LSAC
Sbjct: 422 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 481
Query: 481 HAGFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIW 540
H+G +DLGR F +M QDYK++PK +HYGCMIDLLG +GLF+EAE +I MEM+PDG IW
Sbjct: 482 HSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIW 541
Query: 541 GSLLGACRDHGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDK 600
SLL AC+ HG VELGE AE L ++EP+NPG+YVLLSNIYA AG+W++VA+ R LNDK
Sbjct: 542 CSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDK 601
Query: 601 GMKKVPGCTTIEVDNVVHEFLVGDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDM 660
GMKKVPGC++IE+D+VVHEF++GDK H ++ IY MLEE++ L++ GFVPDTSEVL +M
Sbjct: 602 GMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEM 661
Query: 661 DEEWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVCRNCHAATKLISKIFNREIIA 720
+EEWKEGAL HHSEKLAIAFGLISTKPGT +TI+KNLRVCRNCH ATKLISKI+ REIIA
Sbjct: 662 EEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIA 721
Query: 721 RDRNRFHHFKDGSCSCNDYW 732
RDR RFHHF+DG CSCNDYW
Sbjct: 722 RDRTRFHHFRDGVCSCNDYW 741
BLAST of CmoCh10G006080 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 598.6 bits (1542), Expect = 6.8e-171
Identity = 305/765 (39.87%), Postives = 458/765 (59.87%), Query Frame = 0
Query: 2 ATSAP-SLVLSPTSPSSDPPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFA 61
+T+ P SL P + + P + + LI +C S+R L+Q H +I+TG + ++
Sbjct: 5 STAQPLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYS 64
Query: 62 LSKLIEFSAVSRYADISYAVSLFNSIEEPNLFIWNSMIRGLSISLSPVLALVFFVRMI-H 121
SKL +A+S +A + YA +F+ I +PN F WN++IR + PVL++ F+ M+
Sbjct: 65 ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE 124
Query: 122 AGVEPNSYTFPFLLKSCAKLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEINY 181
+ PN YTFPFL+K+ A+++S G+ +H +K SDVF+ SLI+ Y G+
Sbjct: 125 SQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD--- 184
Query: 182 AQLVFDQSNFRDAISFTALIAGYVLWGYMDRARKLFDEMPVRDVVSWNAMIAGYAQTGRS 241
+D A K+F + +DVVSWN+MI G+ Q G
Sbjct: 185 ----------------------------LDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 244
Query: 242 KEALLLFEEMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNAL 301
+AL LF++M +V + T+V VLSACA+ L+ G + S+IE+ + NL L NA+
Sbjct: 245 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 304
Query: 302 IDMYSKCGDLQTARELFD-------------------------------EMPERDVISWN 361
+DMY+KCG ++ A+ LFD MP++D+++WN
Sbjct: 305 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 364
Query: 362 VMIGGYTHMCSYKEALALFREM-LASGIEPTDITFLNVLPSCACLGAIDVGKWIHAYINK 421
+I Y EAL +F E+ L ++ IT ++ L +CA +GA+++G+WIH+YI K
Sbjct: 365 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 424
Query: 422 NFNSASTSLWTSLIDMYAKCGNIDAARQVFNGMNFKSLASWNAMICGLAMHGQANEALEL 481
+ + + ++LI MY+KCG+++ +R+VFN + + + W+AMI GLAMHG NEA+++
Sbjct: 425 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 484
Query: 482 FSKMSSDGIEPNEITFVGVLSACKHAGFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLG 541
F KM ++PN +TF V AC H G VD F M +Y I P+ +HY C++D+LG
Sbjct: 485 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLG 544
Query: 542 RAGLFEEAESLIQNMEMKPDGAIWGSLLGACRDHGRVELGEIVAERLFELEPDNPGAYVL 601
R+G E+A I+ M + P ++WG+LLGAC+ H + L E+ RL ELEP N GA+VL
Sbjct: 545 RSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVL 604
Query: 602 LSNIYAGAGKWDDVARIRTKLNDKGMKKVPGCTTIEVDNVVHEFLVGDKVHLQSENIYKM 661
LSNIYA GKW++V+ +R + G+KK PGC++IE+D ++HEFL GD H SE +Y
Sbjct: 605 LSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGK 664
Query: 662 LEEVDRQLKEFGFVPDTSEVLYDM-DEEWKEGALSHHSEKLAIAFGLISTKPGTPITIIK 721
L EV +LK G+ P+ S+VL + +EE KE +L+ HSEKLAI +GLIST+ I +IK
Sbjct: 665 LHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIK 724
Query: 722 NLRVCRNCHAATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 732
NLRVC +CH+ KLIS++++REII RDR RFHHF++G CSCND+W
Sbjct: 725 NLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of CmoCh10G006080 vs. TAIR 10
Match:
AT3G12770.1 (mitochondrial editing factor 22 )
HSP 1 Score: 568.2 bits (1463), Expect = 9.8e-162
Identity = 288/700 (41.14%), Postives = 430/700 (61.43%), Query Frame = 0
Query: 32 LISKCRSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSAVSRYADISYAVSLFNSIEEPNL 91
LI L+QIHA+++ GL + F ++KLI A S + DI++A +F+ + P +
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQI 86
Query: 92 FIWNSMIRGLSISLSPVLALVFFVRMIHAGVEPNSYTFPFLLKSCAKLASAREGKQIHAH 151
F WN++IRG S + AL+ + M A V P+S+TFP LLK+C+ L+ + G+ +HA
Sbjct: 87 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 146
Query: 152 VLKLGFVSDVFIHTSLINMYAQSGEINYAQLVFDQSNFRDAISFTALIAGYVLWGYMDRA 211
V +LGF +DVF+ LI +YA+ + A+ VF+
Sbjct: 147 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL------------------------ 206
Query: 212 RKLFDEMPVRDVVSWNAMIAGYAQTGRSKEALLLFEEMRKANVPPNESTIVSVLSACAQS 271
+P R +VSW A+++ YAQ G EAL +F +MRK +V P+ +VSVL+A
Sbjct: 207 -----PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 266
Query: 272 NALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDEMPERDVISWNVMI 331
L G S+ + + GL L+ +L MY+KCG + TA+ LFD+M ++I WN MI
Sbjct: 267 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 326
Query: 332 GGYTHMCSYKEALALFREMLASGIEPTDITFLNVLPSCACLGAIDVGKWIHAYINKNFNS 391
GY +EA+ +F EM+ + P I+ + + +CA +G+++ + ++ Y+ ++
Sbjct: 327 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 386
Query: 392 ASTSLWTSLIDMYAKCGNIDAARQVFNGMNFKSLASWNAMICGLAMHGQANEALELFSKM 451
+ ++LIDM+AKCG+++ AR VF+ + + W+AMI G +HG+A EA+ L+ M
Sbjct: 387 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 446
Query: 452 SSDGIEPNEITFVGVLSACKHAGFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGL 511
G+ PN++TF+G+L AC H+G V G FF+ M D+KI+P+ QHY C+IDLLGRAG
Sbjct: 447 ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGH 506
Query: 512 FEEAESLIQNMEMKPDGAIWGSLLGACRDHGRVELGEIVAERLFELEPDNPGAYVLLSNI 571
++A +I+ M ++P +WG+LL AC+ H VELGE A++LF ++P N G YV LSN+
Sbjct: 507 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 566
Query: 572 YAGAGKWDDVARIRTKLNDKGMKKVPGCTTIEVDNVVHEFLVGDKVHLQSENIYKMLEEV 631
YA A WD VA +R ++ +KG+ K GC+ +EV + F VGDK H + E I + +E +
Sbjct: 567 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 626
Query: 632 DRQLKEFGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPITIIKNLRVC 691
+ +LKE GFV + L+D+++E E L HSE++AIA+GLIST GTP+ I KNLR C
Sbjct: 627 ESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRAC 686
Query: 692 RNCHAATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 732
NCHAATKLISK+ +REI+ RD NRFHHFKDG CSC DYW
Sbjct: 687 VNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
BLAST of CmoCh10G006080 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 563.9 bits (1452), Expect = 1.9e-160
Identity = 291/804 (36.19%), Postives = 450/804 (55.97%), Query Frame = 0
Query: 33 ISKCRSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSA-VSRYADISYAVSLF-NSIEEPN 92
+ C++I L+ H + K GL N ++KL+ S + +S+A +F NS
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 93 LFIWNSMIRGLSISLSPVLALVFFVRMIHAGVEPNSYTFPFLLKSCAKLASAREGKQIHA 152
F++NS+IRG + S A++ F+RM+++G+ P+ YTFPF L +CAK + G QIH
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 153 HVLKLGFVSDVFIHTSLINMYAQSGEINYAQLVFDQSNFRDAISFTALIAGYVLWGY--- 212
++K+G+ D+F+ SL++ YA+ GE++ A+ VFD+ + R+ +S+T++I GY +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 213 ------------------------------------------------------------ 272
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 273 --------MDRARKLFDEMPVRDVVSWNAMIAGYAQTGRSKEALLLFEEMRKANVPPNES 332
+D A++LFDE ++ NAM + Y + G ++EAL +F M + V P+
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 333 TIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKC------------- 392
+++S +S+C+Q + G S ++ G S + NALIDMY KC
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 393 ------------------GDLQTARELFDEMPERDVISWNVMIGGYTHMCSYKEALALFR 452
G++ A E F+ MPE++++SWN +I G ++EA+ +F
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 453 EMLA-SGIEPTDITFLNVLPSCACLGAIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKC 512
M + G+ +T +++ +C LGA+D+ KWI+ YI KN L T+L+DM+++C
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 513 GNIDAARQVFNGMNFKSLASWNAMICGLAMHGQANEALELFSKMSSDGIEPNEITFVGVL 572
G+ ++A +FN + + +++W A I +AM G A A+ELF M G++P+ + FVG L
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 573 SACKHAGFVDLGRLFFSSMIQDYKISPKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPD 632
+AC H G V G+ F SM++ + +SP+ HYGCM+DLLGRAGL EEA LI++M M+P+
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 633 GAIWGSLLGACRDHGRVELGEIVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTK 692
IW SLL ACR G VE+ AE++ L P+ G+YVLLSN+YA AG+W+D+A++R
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 693 LNDKGMKKVPGCTTIEVDNVVHEFLVGDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEV 732
+ +KG++K PG ++I++ HEF GD+ H + NI ML+EV ++ G VPD S V
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
BLAST of CmoCh10G006080 vs. TAIR 10
Match:
AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 563.9 bits (1452), Expect = 1.9e-160
Identity = 284/724 (39.23%), Postives = 446/724 (61.60%), Query Frame = 0
Query: 19 PPYRLLQDHPSLKLISKCRSIRTLRQIHAQIIKTGLHNTQFALSKLIEFSAVSRYADISY 78
PP + L+ +S C+S+ ++Q+HA I++T +++ S L S S ++SY
Sbjct: 5 PPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHK--LNSFLFNLSVSSSSINLSY 64
Query: 79 AVSLFNSI-EEPNLFIWNSMIRGLSISLSPVLALVFFVRMIHAGVEPNSYTFPFLLKSCA 138
A+++F+SI P ++N +R LS S P ++F+ R+ H G + ++F +LK+ +
Sbjct: 65 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 124
Query: 139 KLASAREGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEINYAQLVFDQSNFRDAISFTA 198
K+++ EG ++H K+ + D F+ T ++MYA G INYA+ VFD+ + RD +++
Sbjct: 125 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 184
Query: 199 LIAGYVLWGYMDRARKLFDEMPVRDVVSWNA----MIAGYAQTGRSKEALLLFEEMRKAN 258
+I Y +G +D A KLF+EM +V+ +++ +TG + ++E + + +
Sbjct: 185 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 244
Query: 259 VPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTAR 318
V + + ++++ A + +D+ + R NL + A++ YSKCG L A+
Sbjct: 245 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR----NLFVSTAMVSGYSKCGRLDDAQ 304
Query: 319 ELFDEMPERDVISWNVMIGGYTHMCSYKEALALFREMLASGIEPTDITFLNVLPSCACLG 378
+FD+ ++D++ W MI Y +EAL +F EM SGI+P ++ +V+ +CA LG
Sbjct: 305 VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLG 364
Query: 379 AIDVGKWIHAYINKNFNSASTSLWTSLIDMYAKCGNIDAARQVFNGMNFKSLASWNAMIC 438
+D KW+H+ I+ N + S+ +LI+MYAKCG +DA R VF M +++ SW++MI
Sbjct: 365 ILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMIN 424
Query: 439 GLAMHGQANEALELFSKMSSDGIEPNEITFVGVLSACKHAGFVDLGRLFFSSMIQDYKIS 498
L+MHG+A++AL LF++M + +EPNE+TFVGVL C H+G V+ G+ F+SM +Y I+
Sbjct: 425 ALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT 484
Query: 499 PKSQHYGCMIDLLGRAGLFEEAESLIQNMEMKPDGAIWGSLLGACRDHGRVELGEIVAER 558
PK +HYGCM+DL GRA L EA +I++M + + IWGSL+ ACR HG +ELG+ A+R
Sbjct: 485 PKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKR 544
Query: 559 LFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTKLNDKGMKKVPGCTTIEVDNVVHEFLV 618
+ ELEPD+ GA VL+SNIYA +W+DV IR + +K + K G + I+ + HEFL+
Sbjct: 545 ILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLI 604
Query: 619 GDKVHLQSENIYKMLEEVDRQLKEFGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAFGL 678
GDK H QS IY L+EV +LK G+VPD VL D++EE K+ + HSEKLA+ FGL
Sbjct: 605 GDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGL 664
Query: 679 ISTKPGTP------ITIIKNLRVCRNCHAATKLISKIFNREIIARDRNRFHHFKDGSCSC 732
++ + I I+KNLRVC +CH KL+SK++ REII RDR RFH +K+G CSC
Sbjct: 665 MNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSC 722
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9LN01 | 1.7e-283 | 62.97 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
| O82380 | 9.6e-170 | 39.87 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
| Q9LTV8 | 1.4e-160 | 41.14 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
| Q9LUJ2 | 2.6e-159 | 36.19 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
| O23337 | 2.6e-159 | 39.23 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1HAU9 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucurbit... | [more] |
| A0A6J1JHE6 | 0.0e+00 | 98.50 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucurbit... | [more] |
| A0A0A0LU28 | 0.0e+00 | 90.87 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G3068... | [more] |
| A0A5A7TTJ1 | 0.0e+00 | 90.60 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S3CMX0 | 0.0e+00 | 90.16 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Cucumis ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G08070.1 | 1.2e-284 | 62.97 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G29760.1 | 6.8e-171 | 39.87 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G12770.1 | 9.8e-162 | 41.14 | mitochondrial editing factor 22 | [more] |
| AT3G22690.2 | 1.9e-160 | 36.19 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
| AT4G14820.1 | 1.9e-160 | 39.23 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
