CmoCh10G006060 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G006060
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Aspartate racemase
Location	Cmo_Chr10: 2740672 .. 2746475 (+)
RNA-Seq Expression	CmoCh10G006060
Synteny	CmoCh10G006060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGATGGTGGTATGGCTATGTCATTTTGTGCATTGAATTGCCCAGCAGGTGTTCGACGAAATGCCAATGAGAGCATTTTTCGGTTTAGAAGGAGATTAAACCTGTATTTATCTGTACAGATCTTCTCTGTTATTCAAACTGATGAGAATGACAACTTAGCAGCATCCAAGAAGATGTCGAGTTCAGGAAAATCTCTGTCGAAAACTCGAACTCTTAAGCCCCTTCTTGTCCAGCCAAATACTGTGGGTGTCATAGGGGGAGTGTCGGTTTTTTCCACTCTACTTTTCATGGAAAAGCTCGTTTGGTGGAGTAGGAAGGATGGAGAAGAGAGCATACCTTTTGTTGTCTGCAGCGATCCAGTATTAGACAAGGGAATTCCTCATAGTGATGCCATGATCATCGAGAATTTGAAGCAGAAAACGGCGTTTCTCGAGCAGTCGGGAGCTCGATGCCTAATTACACCTTGCCATCTTTCACATAGGTGGCTTGGTGACACATCTGAGAGCTGCAAATTACCTTTCCTTCACGTCGGAGATTGTGTAGCTAGGGAGCTTAATGAGGCTAAGCTTAAGCAACTTGAAGCAGGTAGCAATGTCCGGATTGGCCTGCTTGCAACTGATACATCAACATTAACTGGTTTTTACCACGAGAGGCTACAAAAGCAGGTTTTGTAAATACATTCACTGCTCATGGCTGATACTCTAGTTTTTACCACGAGAGGCTCGACCCCTTCTCTAAAGTTCTCGAATAAAGTACACTCTTTGTTCGACACTTGAGTCACTTTTGAATACACCTTCGAGTTTAAGGGCATGGTTCTGACATCGTGTTATGAATCATGACTCTCCATAATGGTATAATATTGTCGGCTTTGAGTATAAGCTCTCATGGGTTTACTTTGTACTTTCCCAAAAGGCCTCATACCAATGAAGGTGTCGTCGTGTGAGACTCTGTGATGTCCCACATTTGTTGGGGAGGAGAACAAATCACCCTTTTATAAGGGTGTAGAAACCTTCCCCTAGTAGACCGTTTTAAAGCCTTGAGTGAAAGCCTGAAAGGGAAAGCCTAAAGAGGACAATATCTACTAGCGGTAGATTTGGGTCGTTACGAATGGTATCAGAGCCAGACACTGAACGATGTGTCAGCCTTCTCGTTGTTACCTGAAGGGGGGTAGACACGAGGTAGTGTGCCAGTAAGGACGCTGGGCCCCAAAGGGGGGTGGATTTGATGGTGGTCCCACGTTGATTGGAGAAAGGAACGAGTGCCAGCGAGGACGCTGAGCCCTGAAGGGGGTGGATTTTGATGTCCCACATTGGTTGGGGAGGAGAACAAATCTCACCCTTTATAAGGGTGTGGAAACCTTCTCCTAGTAGACGCGTTTTAAAGCCTTGAGGGGAAGCTCGAAAGCTCGAAAGGGAAAGCCCAAAGAGGACAAGTAGACGCGTTTTAAAGCCTTGAGGGGAAGCTCGAAAGGGAAGGCCCAAAGAGGACAATATCTACTAGCGGTGGATCTGGATCGTTACAGACTCCTCCCAACAATCCTCAACATTTTTCTACACTATTTACTAAACGATCCCAAACATTTCTTCTGAATTCCTCGTGTTCTTTCAGGGCTTCGATGTCGTCGTGCCGGACGAGGCAACCATGGAGCATATAGTAATTTCTGCAGTGGAAGCTTTCCATAAAAGGGATCACGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTTCATGTTCTATTGACAAGGGCTGTGAATATGGTAATCCTTGCTTCTGATGAACTCCTTAATCTTCTTCCTCCAGATGACCCCATTCTGGAAAAATGCATTGACCCCATGGATGCGTTGGCCAAAGCAGCCATTAAATGGTCAAGATCTGCGGGACATCTCCATGAGAAAGCTTAGCTCACAAGCTATATACTTTACGTGTGTTAGGAATCACGGCTCTTCACAATGGTATGATATTGCCCACTTTAAGCCCAAGCTCTCATGGTTTTGCTTTGGCCTTCTCCAAAAGGCCTCGTACCAATAGAGAAAGATAGTATTCCTTGGTCATAAACTCATGATCAATCCCAAAATTAGCCAAAATTAGCCAAGGTGGGACTCACTTCCAATAATCTTCGACAATGTGTTGATTGGAGGCATGAATTAAATGGACGCACTCCCAATAATCTTTGACAATGTGTTGATTAGAGGCATGAATTAAATGTCAATGTGGGACTCACTCCCAATAATCCTCGAAAATGTGTTGATTGGAGGCACGAAGGATGAAATATAAACAGGAACCAACATAGACCACAGCATCAAGCTCTCTTTAGAAGAACATGGAAGCCAGTCCACTGTCTAAATTATCATATTTATTTTATTTTTGTCTCTTAATTTTTTTTTATATAATTAGATTTGTAAAAAATAAAAACAAAAAATAAAAAAAATAAAAAAACTGAAATTTATTTTCAGACCTCATACATAATAAAATATTTGCCTATTTTTCAAATAATTTAGAAAAATATGGTGACAAGGACTTAAATGAAATATTTAGAGAAAAAGAAAATAAAGTTCTGAAAATAAAATGAAATAAAGCTGAAATTTATTTATAATGTTTGGATTTTTTTTTTAAACATTTTTTTTTCAGTTTAAACTTAGTCGATATAAAGAATAAATTAAAAAAAATCTAAAATGTTGGGTTTTATGAATATCTAAAAGTTATTATTATTATTATTATTATTATTTGGTTAAAATAAACGGTATAGACATAAAATGGACTATGCTGAGCGAATTGGAAAGGTCATGTTTTCTCGATGCATTTGAAGACTGGAACTCTAGACCTTGGAACGTTGTTCATCATGAATCGTCTGTTGAGTTTAATTTTCGTTTGATTTGGTAATTTTCTTTTTTTTTTAGTATCTTCTCTGACTCTGAATTCCATCTCGTTCTTGTATTTTACAGATGATGAAGTTTGTTTATGAGGCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGCGACGAAAATCGAAAGCGGGAAAGTAATGTAAGAGACGATTCAAATTCATAAAAACTACCGCCATTCAAACTTCGTACATTTAGAACTTGTTCTTGATATGATTTTCGATTTCGTAAAAGTTTTGCAACGAACCTTTTTTCTTTTTTGAAATGTGTAGAGATGGTCTTGGTAGCTATGTGTATTTTGGATCTGTTCTTGTACAAGTTCAGGTGAGGAATTTTCTATGATAGGTGAATCGGAATCCCCAAAGTAAAATAGCCTAATTAGATAATGAAGGCGAATTATGCTACATAATTCACCTGCAAAGGTTCTCTAGAGATTCGAGTTTTTTCTAGGGGACACCAAATCTTCTTTACAGCCACTGATGAAAGTTGGGTTTGACTCGCAATTTGAGCCTAATAATGTTATTAGAAGGGCGTTTTCATTAATGTCCGTTGAAGTGGGGCATCTGGTTCTTATCTATTTTTATACATAAGAATCTATTTCTTTGAGATTTGATGGTTGAAGAACCATAAATTATTGAGCTGAAAGTTGAGTCTATCTTATTAGGAGCTTGCTATTCACACAGATTCTGAATCTTAATCAACACCCCACCCTCTCAACCTTCCCCCTGGTTCAATCTCAAAGCTTCTATATGCTGACATAATAGTTTCCATTTCAATTTGATTCTGTGTTTAAAGCAACCATTGACATTCCAAACAGTATTTGGATATGTTTGTTCTTGTTTTGCGCATCCATTGGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTATCAAGCTATGTTGCAATGCTAAAGAGGGGAAAATGGGCCTCCACCCATGATATCTATATCGAGGAGCATTCTAAGGGCTTAACATTATTGTTGTTAGTCATTACAAAAAGAAAAGGAAAACAAAAGGCAGCATTTGGATAGGGATCGGATGCCAAGAAGACGATATAATCGCATAAGGAGAGCCTTCCAAAATTCCTTCCCGCTTTAAACTGCACCACCTAAAAGATAGAGCACCCAAAATTGAATCACACCCAAGTGACACACGGTAAATTAAACACTTTTTGAGGGGCAGTAGATAACAAAAAGGTGCAAATTATGTTCTTCATTGATATAAACTCACCGAAACCTCTTGGTGTTTTGCATTTAAAACACTCCATCCTGCTTGCATAATTATGTATTCCGCATCCAATTCTGTACAACACAACATTATATGTTTTTTTCTTTCAGTTCAACATTACATGTTAATTAAACACATTGAATACTGGTGCGAGTTTAAACAACATCAACCAATTTTATTGTTCGTTTTCAGCGTGATCTTTTGAGTAAGGAATTTGAAATTCTGTCGCTGAAAGTAATGCAGGTGTGAATTATATTTCCATTTGAATGGCTTTACTGTTTTGATAAACTTTTATTGTAAAGTTTATTGTTGTGTATGTACCTAGGGCAAACCCAGTCTCCAGATTTCCATCCAGGTGGGATGCTTGCATCAGATCCATACTGATCGGAACCCATCATGTAGGCGCCATAATCACCAGGATAGACGGACTTAAATGCACCACATCTAAAGCAGTTCGGGCGGCTGGCGTAATTGTGAGCTCCGCAGCTGACGGCAGTGCAGTACCAGTCTCCGGCCAACACCTCCGTCTTGTTGTAACTGTAAGTTGAAGGGTCTGGGCCTCCATACTTGGGGTAACTGCAACGATGACATGCTTCTCTTTTCTTGAAATTTACGTTCTGGCAAACGTTGCATATCCAGTCTCCTGCTGACCAGCTCATTCCCTTCTATATATCAAAATACCATTATCCATAAGTTGAGAGAGAATCAAATAAAAAACTGCACAAGGGGTCTAAAACTCTGTCATAATCTTCAACAATGTTCAAGCTCTATGAATGCAATTGGAGTGCCAAAAAAAAAAAAGAGAGAGAGAGAGAAGAAACTTAAGACTTCAAAATTTGAGTACCCTTTTCCCCAAATGCCTTGTCGATGGCTAATGTAAACACACATATATTTCTTTTGTGGGGGGTGGGGGAGGGGAGGGGGGAGGTTGAATCCCAAGAGCTTTTTTCTTCCCTAATAACAGAAGGCCAATGGAGAAAAAAAAAAAGAAAAAAAAAAGAAAGGAATTTGACGACTGAAGTAGGAAGCTCACCTTGATGAAGAAAAGATGGATGTAATAAAGAATGGTTCTGTTGGGTAATAGGTGAATTGAATTGGTGGAAGAGAATTCAAAATTGTTAGAAGTGAGTTTGTTGAATTTGTTAGCTGGGGGAGCGGGGGGTTTATATAGTTGGCCAACTTCTCAGTGTCGGGGTCCATTTTATGGTGGTGTTTCTTTTATTCCCTTGCCTTTACATAGATGGTTTCCTCCTCATGTGATTCCCGGAAGTTGATTATCTTTTTATTCTTAACACAGAAAACGTTTGGCCCGACGGGCAACCCGGTTGGTAAGAGCTTGGAGTCTCTTAGGCATACCGGCTTAGATATCCCAAATTTGAATCTTCAGGTGAGCTTAATACTAAATTTTTTTTTATGTTTCTTTTGTTCGGGGCTTGCGTTGGGCATAGGTGCCCCCTATTATCTATAATATACATATATATCTTATTGAAAACTTCACATGGTAGATTAATTTCTTTAAGCAATACAAATCTATTCAGAAAGGTACATTTCATTCCTAGAAAAATAGACATCTCGTGCAATCATATGAGTATTTTAAATCATTATTCCAGTTCTTGTGCTTTTGTTTGTAGGGTAATAACTTTTCTCAAAAGTATTCCGCGTTTACTCTAG

mRNA sequence

ATGCTTGATGGTGGTATGGCTATGTCATTTTGTGCATTGAATTGCCCAGCAGGTGTTCGACGAAATGCCAATGAGAGCATTTTTCGGTTTAGAAGGAGATTAAACCTGTATTTATCTGTACAGATCTTCTCTGTTATTCAAACTGATGAGAATGACAACTTAGCAGCATCCAAGAAGATGTCGAGTTCAGGAAAATCTCTGTCGAAAACTCGAACTCTTAAGCCCCTTCTTGTCCAGCCAAATACTGTGGGTGTCATAGGGGGAGTGTCGGTTTTTTCCACTCTACTTTTCATGGAAAAGCTCGTTTGGTGGAGTAGGAAGGATGGAGAAGAGAGCATACCTTTTGTTGTCTGCAGCGATCCAGTATTAGACAAGGGAATTCCTCATAGTGATGCCATGATCATCGAGAATTTGAAGCAGAAAACGGCGTTTCTCGAGCAGTCGGGAGCTCGATGCCTAATTACACCTTGCCATCTTTCACATAGGTGGCTTGGTGACACATCTGAGAGCTGCAAATTACCTTTCCTTCACGTCGGAGATTGTGTAGCTAGGGAGCTTAATGAGGCTAAGCTTAAGCAACTTGAAGCAGGTAGCAATGGCTTCGATGTCGTCGTGCCGGACGAGGCAACCATGGAGCATATAGTAATTTCTGCAGTGGAAGCTTTCCATAAAAGGGATCACGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTTCATGTTCTATTGACAAGGGCTGTGAATATGATGATGAAGTTTGTTTATGAGGCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGCGACGAAAATCGAAAGCGGGAAAGTAATCGTGATCTTTTGAGTAAGGAATTTGAAATTCTGTCGCTGAAAGTAATGCAGGGCAAACCCAGTCTCCAGATTTCCATCCAGGTGGGATGCTTGCATCAGATCCATACTGATCGGAACCCATCATGTAGGCGCCATAATCACCAGGATAGACGGACTTAAATGCACCACATCTAAAGCAGTTCGGGCGGCTGGCGTAATTGTGAGCTCCGCAGCTGACGGCAGTGCAGTACCAGTCTCCGGCCAACACCTCCGTCTTGTTGTAACTAAAACGTTTGGCCCGACGGGCAACCCGGTTGGTAAGAGCTTGGAGTCTCTTAGGCATACCGGCTTAGATATCCCAAATTTGAATCTTCAGGTGAGCTTAATACTAAATTTTTTTTTATGTTTCTTTTGTTCGGGGCTTGCGTTGGGCATAGGTGCCCCCTATTATCTATAATATACATATATATCTTATTGAAAACTTCACATGGTAGATTAATTTCTTTAAGCAATACAAATCTATTCAGAAAGGTACATTTCATTCCTAGAAAAATAGACATCTCGTGCAATCATATGAGTATTTTAAATCATTATTCCAGTTCTTGTGCTTTTGTTTGTAGGGTAATAACTTTTCTCAAAAGTATTCCGCGTTTACTCTAG

Coding sequence (CDS)

ATGCTTGATGGTGGTATGGCTATGTCATTTTGTGCATTGAATTGCCCAGCAGGTGTTCGACGAAATGCCAATGAGAGCATTTTTCGGTTTAGAAGGAGATTAAACCTGTATTTATCTGTACAGATCTTCTCTGTTATTCAAACTGATGAGAATGACAACTTAGCAGCATCCAAGAAGATGTCGAGTTCAGGAAAATCTCTGTCGAAAACTCGAACTCTTAAGCCCCTTCTTGTCCAGCCAAATACTGTGGGTGTCATAGGGGGAGTGTCGGTTTTTTCCACTCTACTTTTCATGGAAAAGCTCGTTTGGTGGAGTAGGAAGGATGGAGAAGAGAGCATACCTTTTGTTGTCTGCAGCGATCCAGTATTAGACAAGGGAATTCCTCATAGTGATGCCATGATCATCGAGAATTTGAAGCAGAAAACGGCGTTTCTCGAGCAGTCGGGAGCTCGATGCCTAATTACACCTTGCCATCTTTCACATAGGTGGCTTGGTGACACATCTGAGAGCTGCAAATTACCTTTCCTTCACGTCGGAGATTGTGTAGCTAGGGAGCTTAATGAGGCTAAGCTTAAGCAACTTGAAGCAGGTAGCAATGGCTTCGATGTCGTCGTGCCGGACGAGGCAACCATGGAGCATATAGTAATTTCTGCAGTGGAAGCTTTCCATAAAAGGGATCACGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTTCATGTTCTATTGACAAGGGCTGTGAATATGATGATGAAGTTTGTTTATGAGGCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGCGACGAAAATCGAAAGCGGGAAAGTAA

Protein sequence

MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKMSSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSDPVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESCKLPFLHVGDCVARELNEAKLKQLEAGSNGFDVVVPDEATMEHIVISAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMMMKFVYEAMEATLAFPLRLKVLRRKSKAGK

Homology

[Close]

BLAST of CmoCh10G006060 vs. ExPASy TrEMBL
Match: A0A6J1HCW6 (uncharacterized protein LOC111461681 OS=Cucurbita moschata OX=3662 GN=LOC111461681 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.8e-133
Identity = 248/274 (90.51%), Postives = 250/274 (91.24%), Query Frame = 0


Query: 1   MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM 60
           MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM
Sbjct: 1   MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM 60

Query: 61  SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 120
           SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD
Sbjct: 61  SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 120

Query: 121 PVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESCKLPFLHVGD 180
           PVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESCKLPFLHVGD
Sbjct: 121 PVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESCKLPFLHVGD 180

Query: 181 CVARELNEAKLKQLEAGSN------------------------GFDVVVPDEATMEHIVI 240
           CVARELNEAKLKQLEAGSN                        GFDVVVPDEATMEHIVI
Sbjct: 181 CVARELNEAKLKQLEAGSNVRIGLLATDTSTLTGFYHERLQKQGFDVVVPDEATMEHIVI 240

Query: 241 SAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMMM 251
           SAVEAFHKRDHEGARNLLRIAVHVLLTRAVNM++
Sbjct: 241 SAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMVI 274

[Close]

BLAST of CmoCh10G006060 vs. ExPASy TrEMBL
Match: A0A6J1JJU3 (uncharacterized protein LOC111485232 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485232 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.4e-127
Identity = 240/274 (87.59%), Postives = 244/274 (89.05%), Query Frame = 0


Query: 1   MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM 60
           MLDGGMAMSF ALNCPAGVRRNANES+FRFRRRLN YLSVQIFSVIQTDENDNLAASKKM
Sbjct: 2   MLDGGMAMSFYALNCPAGVRRNANESVFRFRRRLNQYLSVQIFSVIQTDENDNLAASKKM 61

Query: 61  SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 120
           SSSGKSL KTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD
Sbjct: 62  SSSGKSLLKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 121

Query: 121 PVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESCKLPFLHVGD 180
           PVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSES KLPFLHVGD
Sbjct: 122 PVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESSKLPFLHVGD 181

Query: 181 CVARELNEAKLKQLEAGSN------------------------GFDVVVPDEATMEHIVI 240
           CVA ELNEAKLKQLEAGSN                        GFDVVVPD+ATMEHIVI
Sbjct: 182 CVASELNEAKLKQLEAGSNVRIGLLATDTATLTGFYHERLQKQGFDVVVPDKATMEHIVI 241

Query: 241 SAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMMM 251
            AVEAFHKRDHEGARNLLRIAVHVLLTRAVNM++
Sbjct: 242 PAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMVI 275

[Close]

BLAST of CmoCh10G006060 vs. ExPASy TrEMBL
Match: A0A6J1JHU3 (uncharacterized protein LOC111485232 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485232 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.4e-127
Identity = 240/272 (88.24%), Postives = 242/272 (88.97%), Query Frame = 0


Query: 1   MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM 60
           MLDGGMAMSF ALNCPAGVRRNANES+FRFRRRLN YLSVQIFSVIQTDENDNLAASKKM
Sbjct: 2   MLDGGMAMSFYALNCPAGVRRNANESVFRFRRRLNQYLSVQIFSVIQTDENDNLAASKKM 61

Query: 61  SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 120
           SSSGKSL KTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD
Sbjct: 62  SSSGKSLLKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 121

Query: 121 PVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESCKLPFLHVGD 180
           PVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSES KLPFLHVGD
Sbjct: 122 PVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESSKLPFLHVGD 181

Query: 181 CVARELNEAKLKQLEAGSN------------------------GFDVVVPDEATMEHIVI 240
           CVA ELNEAKLKQLEAGSN                        GFDVVVPD+ATMEHIVI
Sbjct: 182 CVASELNEAKLKQLEAGSNVRIGLLATDTATLTGFYHERLQKQGFDVVVPDKATMEHIVI 241

Query: 241 SAVEAFHKRDHEGARNLLRIAVHVLLTRAVNM 249
            AVEAFHKRDHEGARNLLRIAVHVLLTRAVNM
Sbjct: 242 PAVEAFHKRDHEGARNLLRIAVHVLLTRAVNM 273

[Close]

BLAST of CmoCh10G006060 vs. ExPASy TrEMBL
Match: A0A5A7TXR8 (Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00390 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 5.8e-102
Identity = 204/289 (70.59%), Postives = 218/289 (75.43%), Query Frame = 0


Query: 1   MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM 60
           ML GGMAM F A  CPA VRRNANE I RFRRR+NLY SVQI SV+QTD NDNL  SKK+
Sbjct: 2   MLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKI 61

Query: 61  SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 120
           SS GKSLSKTRT KPLLVQPNTVGVIGGVSVFSTLLF+EKLVWWS KDG+ESIPFVVCS+
Sbjct: 62  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSE 121

Query: 121 PVLDKGIP----------------HSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWL 180
           P L KGIP                HSDA IIENL +K AFLE SGARCLITPCHL+HRWL
Sbjct: 122 PALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWL 181

Query: 181 GDTSESCKLPFLHVGDCVARELNEAKLKQLEAGSN-----------------------GF 240
            DTSESCKLPFLHVGDCVAREL EA LK LE G N                       GF
Sbjct: 182 SDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDTTVTGIYYERLQNQGF 241

Query: 241 DVVVPDEATMEHIVISAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMMM 251
           DV++PDEATM+HIVI AVEA +KRD EGARNLLRIAVHVLL RAVNM++
Sbjct: 242 DVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVI 290

[Close]

BLAST of CmoCh10G006060 vs. ExPASy TrEMBL
Match: A0A1S3CMU2 (uncharacterized protein LOC103502741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502741 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 5.8e-102
Identity = 204/289 (70.59%), Postives = 218/289 (75.43%), Query Frame = 0


Query: 1   MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM 60
           ML GGMAM F A  CPA VRRNANE I RFRRR+NLY SVQI SV+QTD NDNL  SKK+
Sbjct: 2   MLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKI 61

Query: 61  SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 120
           SS GKSLSKTRT KPLLVQPNTVGVIGGVSVFSTLLF+EKLVWWS KDG+ESIPFVVCS+
Sbjct: 62  SSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSE 121

Query: 121 PVLDKGIP----------------HSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWL 180
           P L KGIP                HSDA IIENL +K AFLE SGARCLITPCHL+HRWL
Sbjct: 122 PALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWL 181

Query: 181 GDTSESCKLPFLHVGDCVARELNEAKLKQLEAGSN-----------------------GF 240
            DTSESCKLPFLHVGDCVAREL EA LK LE G N                       GF
Sbjct: 182 SDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDTTVTGIYYERLQNQGF 241

Query: 241 DVVVPDEATMEHIVISAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMMM 251
           DV++PDEATM+HIVI AVEA +KRD EGARNLLRIAVHVLL RAVNM++
Sbjct: 242 DVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVI 290

[Close]

BLAST of CmoCh10G006060 vs. TAIR 10
Match: AT1G15410.1 (aspartate-glutamate racemase family )

HSP 1 Score: 195.7 bits (496), Expect = 5.0e-50
Identity = 111/266 (41.73%), Postives = 158/266 (59.40%), Query Frame = 0


Query: 31  RRRLNLYLSVQIFSV-IQTDENDNLAASKK---MSSSGKSLSKTRTLKPLLVQPNTVGVI 90
           R RL+  L++   SV +  DE+++L   KK   +S   ++   +     LL Q NTVG+I
Sbjct: 25  RVRLSRVLAMPPSSVLLHMDESNDLPKPKKGFCLSEDSRNSLNSLPADSLLRQANTVGII 84

Query: 91  GGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSDPVLDKGI------------------P 150
           GGVS  STL F++KLV WS  DG+ S+PFV+CSDP L+K +                  P
Sbjct: 85  GGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPALNKELLLYEENSYPSLYHREESTP 144

Query: 151 HSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESCKLPFLHVGDCVARELNE 210
               +I+ENL+ K  +LE+ GA+ ++ PCH++H W  +  E   +P LH+G+C+A+EL E
Sbjct: 145 VDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWYEEVCEGSLVPLLHMGECIAKELQE 204

Query: 211 AKLKQLEAG------------------------SNGFDVVVPDEATMEHIVISAVEAFHK 251
           AK+K LEAG                        SNGF+ V+PD+ATMEH VI ++EA  +
Sbjct: 205 AKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKR 264

The following BLAST results are available for this feature:

BLAST of CmoCh10G006060 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh10G006060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCW6	2.8e-133	90.51	uncharacterized protein LOC111461681 OS=Cucurbita moschata OX=3662 GN=LOC1114616...	[more]
A0A6J1JJU3	1.4e-127	87.59	uncharacterized protein LOC111485232 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JHU3	1.4e-127	88.24	uncharacterized protein LOC111485232 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7TXR8	5.8e-102	70.59	Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3CMU2	5.8e-102	70.59	uncharacterized protein LOC103502741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CmoCh10G006060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15410.1	5.0e-50	41.73	aspartate-glutamate racemase family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.1860		coord: 80..201 e-value: 6.8E-25 score: 89.8
None	No IPR available	PANTHER	PTHR21198	GLUTAMATE RACEMASE	coord: 1..199 coord: 198..250
None	No IPR available	PANTHER	PTHR21198:SF9	ASPARTATE RACEMASE	coord: 1..199 coord: 198..250
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 82..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G006060.1	CmoCh10G006060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006807	nitrogen compound metabolic process
molecular_function	GO:0036361	racemase activity, acting on amino acids and derivatives
molecular_function	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives