CmoCh10G006040 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh10G006040
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionzinc finger CCCH domain-containing protein 34-like isoform X1
LocationCmo_Chr10: 2736905 .. 2740248 (-)
RNA-Seq ExpressionCmoCh10G006040
SyntenyCmoCh10G006040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATCTCCGCCATGTAAAATAAAAAAAGGAATTGAAAATTGAATTCCATGGAAGGCCGTCTATGACGATGATTTTGTTGCTGCTCTTCCACTTCTCTTACGCTCTCTCTTCTTCTTCTTCTTCCAATTCCTTCTGAGAAGAACACCAATGGGGGAAGATTTGCGTAAACGTAACACTGATTGCGTCTATTTCTTGGCTTCACCTCTTACCTGCAAGAAGGTCGGCTTTTCTCGCTTAATAAATAACAATCGTACCCCTTTTCACGTTACAATTCCTTCTCGATGTGAACACCGGAGAATTTGGTTCATGCTTCCATTATCTTATCACTACTGTGAGGATCTTGCTCTGCATTTGAAGGATTTTTTGTTGCATTCCGTCGAAATGCATCGGCATGATTATGTGTTTGAATTTACGCTGTCGATCATTAGATTTCTCGGTATTAATGTGGAATCGGGTTTTCGTGTTTATGTTTATGCATCGGCAACTGTTTTTTTTTTTTCAGGGTTTTGATTGTGAGTATCGGCACAGCGAGATTGCTAGGCTGAACCCTAGAGATTGTTACTACTGGCTGGCGGGAAACTGCTTAAATGCAGCCTGTGGTTTTCGGCATCCGGTAAGCTGACTATCTGTTTGTTAATATTCACCTGAGCTTGGTTGCAGTCGATGCCTGATTCATCTACCTTGTTTATACATGTTTAGCAATGAAACTTGTTTGGTCTGAACTCTTTCTTTGAATCTTCCAAGACTAAATTTAGGTTGAATTTACTGCCATTTTGTTGAAATTCTTTTCCTGGTTCTCAAGTTTGCATATGCCCTGTTCTGCTTTTGCTTGAAGGCTCAATCCCCATAGCTTTGGTATCTGTAATCACAAATTTGTGCATGTCAGGATGCAACTAAGAACATAGTTTTTTGTTTTGTAAATTTCATTTTGGAATGTAAGTTGTTTGGAAAGTAAGCAATGTTCTAGAGAATGTATTGTGCTAATTTAAGACATAAATTGAGGAAGTGATACTGTTTTTCGTTACTTTGTCACGCAATAAACAGCGGTGGTTTTCGTTTTTCCAAATATGTATTATAGCTCATCTTTATGGATGGATCCAAGAGCTAAGTATCTACACTGAAGGAGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGGAGAACGAAACATTATTTATAAGGGTGTAGAAACCTCTCCCTAACATGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGTGAAAGCCCAAAGAGAACAATATCTCAGTTAGAATGAAACATTCTTTATAAGGATGTGGAAACCTTTCCCTAACGCGTTTTAAAAACTTTGAGGGGAAGCCTGAAAGTAAAACCCCAAAGAGAACAATATCTCGGTTGGGGAGGAGAATGAAACATTCTTTATAAGGATGTGGAAACCTCTCCCTAGCGTGTTTTAAAAACCTTGAGGGGAAGCCCAAAAGTGAAACCCCAAAGAGAACAATATCAGCTAACGGTGAACTTGGGCCGTTACACAAAGAATCTCATGCATTTCAGTAGATTGTTACAAATGCAAATATTATAATGTTTTGTTGACCTTGTTCTAGGTGGTGAACACAAGTAATAATAAGAACTTGGGCCCTTACCTTGTGATTATCAATTTAAGTTGATGGTCTTCTAGGAACTTTATCATGCTCTCATTATGTAATACCATTGTGTTTAAAATTTTTGTTTTCCTTTTTCTCCTTAGCCAATGGATAGTCCTGCTGGAGCAGTGTTAGAATCTTCTCAATGTTCTGTACCTGTGAACAAGACAATCATTCCCTGTTATTTTTATTTCAATGGCTGCTGCAGTAAAGGTGATACATGCTCTTATTTGCATGCCAATGATATTTCTCTTGCTACAAGATCTACAAAGACAGTATTTCCTAGCGGCAACGCGTCGTCCTCTGAGGATAAAACAGCTTCAGGAAACAAAAAAGGACTAGCCTCTACCGACGCAGATGCATTTCTTCATCCATCGAAGAACGTAGCTGGTCCGAAAATTGATGTTACATTTCAATGCTCGAGTCTCGGTCAACCTTCTGAAAATGTTTCACATCAAAGTGCCTCTGCAAAGATCTTGTTGCTTGAGTGTGAAAAAGTGGCTGTTGATGAGCTTGTCTCCTCGTCTCCAGCTGTGGGATCTAATGACAGTACATCTCATATACATGCTGTTGCAGATCAGAGTTATGAGGAGCCGATGACGGACAGTACTGAGGAAGGCAACCTATCCCCTGGCTTTGACGTCGTCGTAGGTGATGGGTCGGGGAATTTGGCTAGCCACGATGATCCAGAGTACATCCTGTCAACTAATCTGGAACAGAGAGAACAGGATCCCGGATTGTGCAGGGAAAACTTTGAAGACCATATTGCCTATGAGCCAATGCATTCTGATTTAGAACTTCTTTATGAACATGAGATGCACTCATACAACCACTTAGAGACCGAACCTGTTCTTTTCAATGACAGAAACATCATCAGCTGTCCGAGAGGGAAACTCATCAAGTCCATGTTTTCTCAAAAGAAAAGGCTCACCCTCGTGAATCTAGATTCGGAGGAATGGAATCATGCCGACCTTCGAAGCTATCTGCAGAGAGACAGCGTTTCTGGCAACCGTTCGATTGTTAGTTTATCAAGGAGAAGAAATCAATTGTCATGTCGAATGAGTGGAAACTTTGTGAAACCTCGGAAGCCTGGTTTGTATCAACCACCCCTTGGAAGAAGACTAGCATTACAGGTCGGGAAGATTTCTAGAGTATCACCTCCAGAAAACATAACCTTTTCAAATGGTTTTAGTCAATATGGATCGTTCAGACACTCAAGACAACACAGACCCTGCGGTCACTACGACGAGTACGCTCCGACCACACCACAACAAACATTGTCAAACATGTCAAGAAAATCCATCTCGAGGGAACCTGTCGTAAGGGATCGTGGATTGAATCCGAAGTCAGTTCCATTCAAAGGACCGAAAACCCTTTCGCAGATCAAAGAAGAGAAGCGAAAAGTAGAAGAAAATGGAGGGTTCTCAATCGAAAAACGCCGTTCGATCGGAGCTGCATCATCTTCTACCGACTTTAGAGGGCCAAAACCTTTAAGTGATATCCTGAAAGACAAAAGGAAGGTGGAGGAGGAGGAGGAGCTGGTGAAGGAAATGAATAGAAATCATATATTGCTTTAGTTAGTGTTAGCTGAAACAGAAGCTCAACTTGAGTGTCTATGGCGGCCTTGCCATTCTTTTAACGGTCTTCATTCAGTATTTGAATGTATGCATCTGATCCTTAAACTTCCATATTCAGTTTAGGGTAAAATTGTTTTAGGTTGTAAAT

mRNA sequence

TGATCTCCGCCATGTAAAATAAAAAAAGGAATTGAAAATTGAATTCCATGGAAGGCCGTCTATGACGATGATTTTGTTGCTGCTCTTCCACTTCTCTTACGCTCTCTCTTCTTCTTCTTCTTCCAATTCCTTCTGAGAAGAACACCAATGGGGGAAGATTTGCGTAAACGTAACACTGATTGCGTCTATTTCTTGGCTTCACCTCTTACCTGCAAGAAGGGTTTTGATTGTGAGTATCGGCACAGCGAGATTGCTAGGCTGAACCCTAGAGATTGTTACTACTGGCTGGCGGGAAACTGCTTAAATGCAGCCTGTGGTTTTCGGCATCCGCCAATGGATAGTCCTGCTGGAGCAGTGTTAGAATCTTCTCAATGTTCTGTACCTGTGAACAAGACAATCATTCCCTGTTATTTTTATTTCAATGGCTGCTGCAGTAAAGGTGATACATGCTCTTATTTGCATGCCAATGATATTTCTCTTGCTACAAGATCTACAAAGACAGTATTTCCTAGCGGCAACGCGTCGTCCTCTGAGGATAAAACAGCTTCAGGAAACAAAAAAGGACTAGCCTCTACCGACGCAGATGCATTTCTTCATCCATCGAAGAACGTAGCTGGTCCGAAAATTGATGTTACATTTCAATGCTCGAGTCTCGGTCAACCTTCTGAAAATGTTTCACATCAAAGTGCCTCTGCAAAGATCTTGTTGCTTGAGTGTGAAAAAGTGGCTGTTGATGAGCTTGTCTCCTCGTCTCCAGCTGTGGGATCTAATGACAGTACATCTCATATACATGCTGTTGCAGATCAGAGTTATGAGGAGCCGATGACGGACAGTACTGAGGAAGGCAACCTATCCCCTGGCTTTGACGTCGTCGTAGGTGATGGGTCGGGGAATTTGGCTAGCCACGATGATCCAGAGTACATCCTGTCAACTAATCTGGAACAGAGAGAACAGGATCCCGGATTGTGCAGGGAAAACTTTGAAGACCATATTGCCTATGAGCCAATGCATTCTGATTTAGAACTTCTTTATGAACATGAGATGCACTCATACAACCACTTAGAGACCGAACCTGTTCTTTTCAATGACAGAAACATCATCAGCTGTCCGAGAGGGAAACTCATCAAGTCCATGTTTTCTCAAAAGAAAAGGCTCACCCTCGTGAATCTAGATTCGGAGGAATGGAATCATGCCGACCTTCGAAGCTATCTGCAGAGAGACAGCGTTTCTGGCAACCGTTCGATTGTTAGTTTATCAAGGAGAAGAAATCAATTGTCATGTCGAATGAGTGGAAACTTTGTGAAACCTCGGAAGCCTGGTTTGTATCAACCACCCCTTGGAAGAAGACTAGCATTACAGGTCGGGAAGATTTCTAGAGTATCACCTCCAGAAAACATAACCTTTTCAAATGGTTTTAGTCAATATGGATCGTTCAGACACTCAAGACAACACAGACCCTGCGGTCACTACGACGAGTACGCTCCGACCACACCACAACAAACATTGTCAAACATGTCAAGAAAATCCATCTCGAGGGAACCTGTCGTAAGGGATCGTGGATTGAATCCGAAGTCAGTTCCATTCAAAGGACCGAAAACCCTTTCGCAGATCAAAGAAGAGAAGCGAAAAGTAGAAGAAAATGGAGGGTTCTCAATCGAAAAACGCCGTTCGATCGGAGCTGCATCATCTTCTACCGACTTTAGAGGGCCAAAACCTTTAAGTGATATCCTGAAAGACAAAAGGAAGGTGGAGGAGGAGGAGGAGCTGGTGAAGGAAATGAATAGAAATCATATATTGCTTTAGTTAGTGTTAGCTGAAACAGAAGCTCAACTTGAGTGTCTATGGCGGCCTTGCCATTCTTTTAACGGTCTTCATTCAGTATTTGAATGTATGCATCTGATCCTTAAACTTCCATATTCAGTTTAGGGTAAAATTGTTTTAGGTTGTAAAT

Coding sequence (CDS)

ATGGGGGAAGATTTGCGTAAACGTAACACTGATTGCGTCTATTTCTTGGCTTCACCTCTTACCTGCAAGAAGGGTTTTGATTGTGAGTATCGGCACAGCGAGATTGCTAGGCTGAACCCTAGAGATTGTTACTACTGGCTGGCGGGAAACTGCTTAAATGCAGCCTGTGGTTTTCGGCATCCGCCAATGGATAGTCCTGCTGGAGCAGTGTTAGAATCTTCTCAATGTTCTGTACCTGTGAACAAGACAATCATTCCCTGTTATTTTTATTTCAATGGCTGCTGCAGTAAAGGTGATACATGCTCTTATTTGCATGCCAATGATATTTCTCTTGCTACAAGATCTACAAAGACAGTATTTCCTAGCGGCAACGCGTCGTCCTCTGAGGATAAAACAGCTTCAGGAAACAAAAAAGGACTAGCCTCTACCGACGCAGATGCATTTCTTCATCCATCGAAGAACGTAGCTGGTCCGAAAATTGATGTTACATTTCAATGCTCGAGTCTCGGTCAACCTTCTGAAAATGTTTCACATCAAAGTGCCTCTGCAAAGATCTTGTTGCTTGAGTGTGAAAAAGTGGCTGTTGATGAGCTTGTCTCCTCGTCTCCAGCTGTGGGATCTAATGACAGTACATCTCATATACATGCTGTTGCAGATCAGAGTTATGAGGAGCCGATGACGGACAGTACTGAGGAAGGCAACCTATCCCCTGGCTTTGACGTCGTCGTAGGTGATGGGTCGGGGAATTTGGCTAGCCACGATGATCCAGAGTACATCCTGTCAACTAATCTGGAACAGAGAGAACAGGATCCCGGATTGTGCAGGGAAAACTTTGAAGACCATATTGCCTATGAGCCAATGCATTCTGATTTAGAACTTCTTTATGAACATGAGATGCACTCATACAACCACTTAGAGACCGAACCTGTTCTTTTCAATGACAGAAACATCATCAGCTGTCCGAGAGGGAAACTCATCAAGTCCATGTTTTCTCAAAAGAAAAGGCTCACCCTCGTGAATCTAGATTCGGAGGAATGGAATCATGCCGACCTTCGAAGCTATCTGCAGAGAGACAGCGTTTCTGGCAACCGTTCGATTGTTAGTTTATCAAGGAGAAGAAATCAATTGTCATGTCGAATGAGTGGAAACTTTGTGAAACCTCGGAAGCCTGGTTTGTATCAACCACCCCTTGGAAGAAGACTAGCATTACAGGTCGGGAAGATTTCTAGAGTATCACCTCCAGAAAACATAACCTTTTCAAATGGTTTTAGTCAATATGGATCGTTCAGACACTCAAGACAACACAGACCCTGCGGTCACTACGACGAGTACGCTCCGACCACACCACAACAAACATTGTCAAACATGTCAAGAAAATCCATCTCGAGGGAACCTGTCGTAAGGGATCGTGGATTGAATCCGAAGTCAGTTCCATTCAAAGGACCGAAAACCCTTTCGCAGATCAAAGAAGAGAAGCGAAAAGTAGAAGAAAATGGAGGGTTCTCAATCGAAAAACGCCGTTCGATCGGAGCTGCATCATCTTCTACCGACTTTAGAGGGCCAAAACCTTTAAGTGATATCCTGAAAGACAAAAGGAAGGTGGAGGAGGAGGAGGAGCTGGTGAAGGAAATGAATAGAAATCATATATTGCTTTAG

Protein sequence

MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEELVKEMNRNHILL
Homology
BLAST of CmoCh10G006040 vs. ExPASy Swiss-Prot
Match: Q6AT25 (Zinc finger CCCH domain-containing protein 34 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0176400 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.3e-35
Identity = 155/540 (28.70%), Postives = 230/540 (42.59%), Query Frame = 0

Query: 6   RKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMDS 65
           R+ NTDCVYFLASP TC KG  CEYRH++ AR N R+C+YW  GNC+N +C FRHPP+++
Sbjct: 14  RRCNTDCVYFLASPFTCTKGSKCEYRHADGARFNRRNCWYWFKGNCVNPSCTFRHPPLEN 73

Query: 66  ---PAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPS 125
                      S CS  V K   PCYFY+N  CSKGD C YLH                S
Sbjct: 74  LNKTKSLADPLSLCSTSV-KAANPCYFYYNSHCSKGDNCPYLH------------EPLTS 133

Query: 126 GNASSSEDKTASGNKKGLASTDADAFLHPSKN-VAGPKIDVTFQCSSLGQPSENVSHQSA 185
            +A  +  K  + N     S   D  +  SK+ +  P  D +     +   S N     A
Sbjct: 134 NDAVGTSCKATTSNPAVSKSYVGDEMVEESKDTITNPCQDTSCHIKEV-PVSINPEFGEA 193

Query: 186 SAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTE--EGNLSPGF 245
            A    LE     +DE +  S             AV+D +  +   D TE  E + SPGF
Sbjct: 194 EAVSGALE-TSTDIDEYMKCS-------------AVSDLNSGDSTMDHTEQDERDSSPGF 253

Query: 246 DVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEM 305
           DV+V D    L++  D E+ L+T  + +            D + Y+        +Y H+ 
Sbjct: 254 DVLVDD---CLSNKSDLEHQLTTESDNKVLH---AEYGIRDPVLYD--------MYYHDP 313

Query: 306 HSYNHLETEPVLFNDRN---IISCPRGKLIKSMFSQKKRLTLVNL---DSEEWNHADLRS 365
             YN+ E E    +DR     +  P G         +  +TL +L   ++E  +    R 
Sbjct: 314 EYYNY-EPEFCGLDDRQGYLYLCQPNG-----AHEHESEITLGHLLPQNTEVTSDEYDRR 373

Query: 366 YLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSP 425
           +    + + + +  +   +  Q+        +  R+P   +   G++  +   K SR   
Sbjct: 374 FFNPRNFTSSVADTNFVHQHTQI------RHISKRRPENRKGAKGKKDCI---KRSRCLE 433

Query: 426 PENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLN 485
           P+N T      Q      +RQ +     +   P           +    ++ V+  +   
Sbjct: 434 PKNST------QQIESMPTRQRKDYLMGECPQPANHATFRGRRKKNRGKQQHVLSAKSSE 488

Query: 486 PKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRK 534
             +  F GPKTL+QIKEEK K   N  FS     +    S S DF GPK L+++L  K +
Sbjct: 494 HPTADFTGPKTLAQIKEEKCK--SNSSFSHSTACTPNVRSFSDDFEGPKSLTELLMTKSR 488

BLAST of CmoCh10G006040 vs. ExPASy Swiss-Prot
Match: Q6K977 (Zinc finger CCCH domain-containing protein 19 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0831100 PE=2 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 4.1e-32
Identity = 158/571 (27.67%), Postives = 231/571 (40.46%), Query Frame = 0

Query: 3   EDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
           E  R+R+TDC+YFLASPLTCKKG +CEYRHS+ AR+NPRDC+YW  GNC N  C FRHPP
Sbjct: 13  EARRRRSTDCIYFLASPLTCKKGSECEYRHSDAARMNPRDCWYWFNGNCANPKCSFRHPP 72

Query: 63  MDSPAGAVL-------ESSQCSVPVNKTI-----------IPCYFYFNGCCSKGDTCSYL 122
           +D   GA          + Q SVP    +           +PCY++  G C KGD C++L
Sbjct: 73  LDGLVGAPTTPRTSQQSAPQVSVPAQAPVPNPASGTAKQGVPCYYFQKGMCVKGDRCAFL 132

Query: 123 HANDI--SLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDAD--AFLHPSKNVAGPKI 182
           H      S A + T  VF   +    + K +       A  +A    F  P  +    K 
Sbjct: 133 HLPQATGSPAPQHTTKVFAPASVPHPQLKNSWTKPNSSAQQNAPPAIFDKPKDSAHNGKT 192

Query: 183 DVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQ 242
                 ++    S  + H    + +         V +     P+ G  D  +       +
Sbjct: 193 AQKQNLTNRAGHSSGIIHDKKGSYM------PSGVTKNYRPPPSTG--DDLAENGVEMGE 252

Query: 243 SYEEPMTDSTEEGNLSPGFDVVVGDGSGNL--ASHDDPEYILSTNLEQREQDPGLCRENF 302
              EP          SPG DV+ G    N   +  +D      TN    EQ  G+ R+  
Sbjct: 253 FVREP----------SPGSDVLTGGADDNTEQSLREDRGAYRRTN---GEQHIGMLRQT- 312

Query: 303 EDHIAYEPMH--SDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL 362
            D   +E  H  S  +LL E     ++  E  P+  +  ++    R +L+K       R 
Sbjct: 313 HDSYGFERSHRGSAEKLLSESR---FSQREPMPLTADSSDL----RQRLLKQRRLNNPRS 372

Query: 363 TLV----NLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGL 422
             V    N+  E+  H   R   QR     +   VS SR R ++       F    + GL
Sbjct: 373 GQVSDRHNVYPEDERHDRHR---QRGEEQASNDGVSSSRLRGRIRLPAETTF---DRLGL 432

Query: 423 YQPPLGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQT 482
            QP   R      G  +R+SPP                        G   +     P + 
Sbjct: 433 -QPEKER----DRGPRARLSPPSQTDLR------------------GKLHDRLKAKPNED 492

Query: 483 LSNMSRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEK-----RKVEENGGFSIEKRR 536
           +S   + S+S+         + +S+ F GPK+L+++K +K      K   +    +    
Sbjct: 493 VSGNVQSSLSK------ANEDAESLNFAGPKSLAELKAKKVAGSLMKSSRSLTGPVRMTS 519

BLAST of CmoCh10G006040 vs. ExPASy Swiss-Prot
Match: Q0J952 (Zinc finger CCCH domain-containing protein 32 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0671800 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 9.2e-32
Identity = 165/590 (27.97%), Postives = 241/590 (40.85%), Query Frame = 0

Query: 3   EDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
           E+  +RNTDCVYFLASPLTCKKG +C++RHS+ AR+NPRDC+YWL  NCLN  C FRHPP
Sbjct: 28  EEALRRNTDCVYFLASPLTCKKGNECDFRHSDNARMNPRDCWYWLNSNCLNPKCPFRHPP 87

Query: 63  MDSPAGA------VLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRST 122
           +D   GA       + S        K ++PCY++  G C KGD C++ H    S+    +
Sbjct: 88  IDGMFGAPTTGMPAVSSHYAPFNSGKQLVPCYYFKKGNCLKGDRCAFYHGPQ-SVGNNPS 147

Query: 123 KTVFPSGNASSSEDKTAS----GNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQP 182
           + V    +    + +T      G K  + ST++     P  N  G       + +     
Sbjct: 148 EQVVKVSSLPLEQLQTQKNDLLGIKDSVQSTNSIQHGAPITNERGK--TAVDRSTVNSAR 207

Query: 183 SENVSHQSASAKILLLECEKV------AVDELVSSS-----PAVGSNDSTSHIHAVAD-- 242
           +  V+   AS  +   + EKV      A+ E  ++S     P    N        V D  
Sbjct: 208 TATVAIPVASNAMSCPKSEKVKSSTPAALKESFTTSSGGDHPECYQNHFPMDSDPVRDWN 267

Query: 243 QSYEEPMTDSTEE---------GNLSPGFDVVV-GDGSGNLASHDDPEYILSTNLEQREQ 302
           QSYE P  D   +         G  SPGFDV+V  D  G    HD              +
Sbjct: 268 QSYEMPPADDLPQNSREADELLGESSPGFDVLVDNDADGAAYLHD--------------E 327

Query: 303 DPGLCRENFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVL------FNDRNIISCPRG 362
           D G      ED   YE   +D ++   HE   +N ++ +  +      +  +   S  R 
Sbjct: 328 DFGGDMYPVED---YEYAPADFDVRAHHERERFNGMDEQDQMGHMYDGYERKRRRSSERS 387

Query: 363 KLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGN 422
             ++  F  ++R    + D  E + +DLR  L+R  +  N S +++S  RN    R    
Sbjct: 388 --MERPFHSERRFLQRDRDRVEMDGSDLRHRLRRRRI--NESSLAISPERNGEQRRRDER 447

Query: 423 FVKPRKPG------LYQPPLGRRLALQVG---KISRVSPPENITFSNGFSQYGSFR---- 482
           + + R  G       +Q   G  L+ ++    K+   SP    T S         R    
Sbjct: 448 Y-RERAHGHRSHRDHHQSSRGSTLSSRLQGRIKLPGRSPDRVDTRSEKERDRRRLRDRLS 507

Query: 483 -------HSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGPK 534
                     +HR  G ++E       QT    S  ++       D     K VP     
Sbjct: 508 PVRRTEFQGTRHREAGQHEE-------QTQRRSSELALGSRNA--DGQHLTKDVP--DSH 567

BLAST of CmoCh10G006040 vs. ExPASy Swiss-Prot
Match: Q9ZUM0 (Zinc finger CCCH domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=At2g02160 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.6e-31
Identity = 120/377 (31.83%), Postives = 172/377 (45.62%), Query Frame = 0

Query: 3   EDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
           ED  K NTDCVYFLASPLTCKKG +CEYRHSE AR+NPRDCYYWL GNCLN  CGFRHPP
Sbjct: 26  EDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWLNGNCLNPKCGFRHPP 85

Query: 63  MD--------SPAGAV--LESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHA-NDISL 122
           ++        +PA +V  + ++     V K  +PC F+  G C KGD CS+LH  N  + 
Sbjct: 86  LEGLLGNQGGAPAVSVQPIHATAQHPSVAKQPVPCLFFQKGMCMKGDMCSFLHTPNPAAY 145

Query: 123 ATRSTKTVFPSGNASSSEDKTASG-NKKGLASTDADAFLHPSKNV-AGPKIDVTFQCSSL 182
             +      P+ +   S+    +   +K L   +    +    ++ A P++  T    S 
Sbjct: 146 KKQHPVEAKPATDPQCSKKPIENNTEEKKLPDVNLSKVVKGHTDISAAPRVASTGLRDSR 205

Query: 183 GQPSENVSHQSASAKILLLECEKVAVDELVSSSPAV---GSNDSTS-HIHAVADQSYEEP 242
                  +H      +        +  E   S+  +   GS+D+ S H    AD    E 
Sbjct: 206 SVEGYIPNHVGYEPVVQRKGPGFPSFTEGGHSTQLLQKYGSDDNNSFHNGKDADDVLRES 265

Query: 243 MTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYE 302
                     SPGFDV+V + +G     D   Y +     +R Q+ G        +  Y+
Sbjct: 266 ----------SPGFDVLVDNEAG-----DSEYYHVEDRYGRRSQERG--------NSEYD 325

Query: 303 PMHS-----DLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVN 358
           P  S     D E L E    SY+  E     +  R + S    +L + ++++ +R     
Sbjct: 326 PDFSAIADGDKEALREQRFDSYDRREDRG--WGHRRVSSEREDRLDRRVYAEDER----- 370

BLAST of CmoCh10G006040 vs. ExPASy Swiss-Prot
Match: Q5ZJJ1 (Zinc finger CCCH domain-containing protein 11A OS=Gallus gallus OX=9031 GN=ZC3H11A PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 6.0e-07
Identity = 39/134 (29.10%), Postives = 57/134 (42.54%), Query Frame = 0

Query: 5   LRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMD 64
           + K+  DC ++  S  TC KG +C +RH E A  N   C  W  G C    C FRH  +D
Sbjct: 1   MSKQGDDCYFYFYS--TCNKGDNCPFRHCEAALGNETICTLWKEGRCFRNVCRFRHMEID 60

Query: 65  SPAGAVLESSQCSVPVNKTIIPCYFYFN-GCCSKGDTCSYLHAND---ISLATRSTKTVF 124
                            ++ IPC++    G C K + C++ H        L    +KT  
Sbjct: 61  K---------------KRSEIPCFWENQPGGCQKSN-CAFHHTKGRYVDGLFLPPSKTTL 116

Query: 125 PSGNASSSEDKTAS 135
           PS   S+ +D  A+
Sbjct: 121 PSPPESADDDLKAA 116

BLAST of CmoCh10G006040 vs. ExPASy TrEMBL
Match: A0A6J1HAR9 (zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461673 PE=4 SV=1)

HSP 1 Score: 1112.1 bits (2875), Expect = 0.0e+00
Identity = 551/551 (100.00%), Postives = 551/551 (100.00%), Query Frame = 0

Query: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120
           PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420
           SGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEL 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEL
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEL 540

Query: 541 VKEMNRNHILL 552
           VKEMNRNHILL
Sbjct: 541 VKEMNRNHILL 551

BLAST of CmoCh10G006040 vs. ExPASy TrEMBL
Match: A0A6J1JJH0 (zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485142 PE=4 SV=1)

HSP 1 Score: 1048.5 bits (2710), Expect = 9.7e-303
Identity = 524/551 (95.10%), Postives = 531/551 (96.37%), Query Frame = 0

Query: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIAR+NPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARVNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120
           PPMDSPAG VLESS CSVPVNKTIIPCYFYFNGCCSKGDTCS+LHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGTVLESSLCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGL STDADAFLHPSK VA PKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLDSTDADAFLHPSKKVACPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDEL+SSSPAVGSNDSTSH+HAVADQ YEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELLSSSPAVGSNDSTSHVHAVADQRYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHDDPEY+LSTNLEQRE D GLCRENFEDHIAYE MHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYVLSTNLEQRELDTGLCRENFEDHIAYESMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPR KLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRRKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420
           SGNRSIVSLSRRRN LSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISR SPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNGLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPT PQQTL +MSRKSI REPVVRDRG N KSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLDMSRKSILREPVVRDRGFNLKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEL 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSS DFRGPK LSDILKDKRKV EEEEL
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSADFRGPKALSDILKDKRKV-EEEEL 540

Query: 541 VKEMNRNHILL 552
           VKEMNR+HILL
Sbjct: 541 VKEMNRHHILL 550

BLAST of CmoCh10G006040 vs. ExPASy TrEMBL
Match: A0A6J1JK29 (zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485142 PE=4 SV=1)

HSP 1 Score: 1007.7 bits (2604), Expect = 1.9e-290
Identity = 524/646 (81.11%), Postives = 531/646 (82.20%), Query Frame = 0

Query: 1   MGEDLRKRNTDCVYFLASPLTCKK------------------------------------ 60
           MGEDLRKRNTDCVYFLASPLTCKK                                    
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKVSFSCLINNNRTSFHVTIPSRCEHRGIWLMLPLSYH 60

Query: 61  -----------------------------------------------------------G 120
                                                                      G
Sbjct: 61  YCEDLALHLKDFLLHSLEMHRRDYVFEFTLSIIRFLGFNVESAFRVYVYVMNMATIFFQG 120

Query: 121 FDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMDSPAGAVLESSQCSVPVNKTII 180
           FDCEYRHSEIAR+NPRDCYYWLAGNCLNAACGFRHPPMDSPAG VLESS CSVPVNKTII
Sbjct: 121 FDCEYRHSEIARVNPRDCYYWLAGNCLNAACGFRHPPMDSPAGTVLESSLCSVPVNKTII 180

Query: 181 PCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDA 240
           PCYFYFNGCCSKGDTCS+LHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGL STDA
Sbjct: 181 PCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLDSTDA 240

Query: 241 DAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAV 300
           DAFLHPSK VA PKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDEL+SSSPAV
Sbjct: 241 DAFLHPSKKVACPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELLSSSPAV 300

Query: 301 GSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLE 360
           GSNDSTSH+HAVADQ YEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEY+LSTNLE
Sbjct: 301 GSNDSTSHVHAVADQRYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYVLSTNLE 360

Query: 361 QREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKL 420
           QRE D GLCRENFEDHIAYE MHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPR KL
Sbjct: 361 QRELDTGLCRENFEDHIAYESMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRRKL 420

Query: 421 IKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFV 480
           IKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRN LSCRMSGNFV
Sbjct: 421 IKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNGLSCRMSGNFV 480

Query: 481 KPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYA 540
           KPRKPGLYQPPLGRRLALQVGKISR SPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYA
Sbjct: 481 KPRKPGLYQPPLGRRLALQVGKISRGSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYA 540

Query: 541 PTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEK 552
           PT PQQTL +MSRKSI REPVVRDRG N KSVPFKGPKTLSQIKEEKRKVEENGGFSIEK
Sbjct: 541 PTRPQQTLLDMSRKSILREPVVRDRGFNLKSVPFKGPKTLSQIKEEKRKVEENGGFSIEK 600

BLAST of CmoCh10G006040 vs. ExPASy TrEMBL
Match: A0A6J1HCV5 (zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461673 PE=4 SV=1)

HSP 1 Score: 968.8 bits (2503), Expect = 9.8e-279
Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0

Query: 63  MDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPS 122
           MDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPS
Sbjct: 1   MDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPS 60

Query: 123 GNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSAS 182
           GNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSAS
Sbjct: 61  GNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSAS 120

Query: 183 AKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFDVV 242
           AKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFDVV
Sbjct: 121 AKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFDVV 180

Query: 243 VGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMHSY 302
           VGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMHSY
Sbjct: 181 VGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMHSY 240

Query: 303 NHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSG 362
           NHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSG
Sbjct: 241 NHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSG 300

Query: 363 NRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNG 422
           NRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNG
Sbjct: 301 NRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNG 360

Query: 423 FSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGP 482
           FSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGP
Sbjct: 361 FSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGP 420

Query: 483 KTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEELVK 542
           KTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEELVK
Sbjct: 421 KTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEELVK 480

Query: 543 EMNRNHILL 552
           EMNRNHILL
Sbjct: 481 EMNRNHILL 489

BLAST of CmoCh10G006040 vs. ExPASy TrEMBL
Match: A0A6J1HAV5 (uncharacterized protein LOC111461673 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111461673 PE=4 SV=1)

HSP 1 Score: 896.0 bits (2314), Expect = 8.1e-257
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0

Query: 97  KGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVA 156
           KGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVA
Sbjct: 10  KGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVA 69

Query: 157 GPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHA 216
           GPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHA
Sbjct: 70  GPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHA 129

Query: 217 VADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRE 276
           VADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRE
Sbjct: 130 VADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRE 189

Query: 277 NFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL 336
           NFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL
Sbjct: 190 NFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL 249

Query: 337 TLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPP 396
           TLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPP
Sbjct: 250 TLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPP 309

Query: 397 LGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNM 456
           LGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNM
Sbjct: 310 LGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNM 369

Query: 457 SRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST 516
           SRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST
Sbjct: 370 SRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST 429

Query: 517 DFRGPKPLSDILKDKRKVEEEEELVKEMNRNHILL 552
           DFRGPKPLSDILKDKRKVEEEEELVKEMNRNHILL
Sbjct: 430 DFRGPKPLSDILKDKRKVEEEEELVKEMNRNHILL 464

BLAST of CmoCh10G006040 vs. TAIR 10
Match: AT2G02160.1 (CCCH-type zinc finger family protein )

HSP 1 Score: 137.5 bits (345), Expect = 3.2e-32
Identity = 120/377 (31.83%), Postives = 172/377 (45.62%), Query Frame = 0

Query: 3   EDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
           ED  K NTDCVYFLASPLTCKKG +CEYRHSE AR+NPRDCYYWL GNCLN  CGFRHPP
Sbjct: 26  EDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWLNGNCLNPKCGFRHPP 85

Query: 63  MD--------SPAGAV--LESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHA-NDISL 122
           ++        +PA +V  + ++     V K  +PC F+  G C KGD CS+LH  N  + 
Sbjct: 86  LEGLLGNQGGAPAVSVQPIHATAQHPSVAKQPVPCLFFQKGMCMKGDMCSFLHTPNPAAY 145

Query: 123 ATRSTKTVFPSGNASSSEDKTASG-NKKGLASTDADAFLHPSKNV-AGPKIDVTFQCSSL 182
             +      P+ +   S+    +   +K L   +    +    ++ A P++  T    S 
Sbjct: 146 KKQHPVEAKPATDPQCSKKPIENNTEEKKLPDVNLSKVVKGHTDISAAPRVASTGLRDSR 205

Query: 183 GQPSENVSHQSASAKILLLECEKVAVDELVSSSPAV---GSNDSTS-HIHAVADQSYEEP 242
                  +H      +        +  E   S+  +   GS+D+ S H    AD    E 
Sbjct: 206 SVEGYIPNHVGYEPVVQRKGPGFPSFTEGGHSTQLLQKYGSDDNNSFHNGKDADDVLRES 265

Query: 243 MTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYE 302
                     SPGFDV+V + +G     D   Y +     +R Q+ G        +  Y+
Sbjct: 266 ----------SPGFDVLVDNEAG-----DSEYYHVEDRYGRRSQERG--------NSEYD 325

Query: 303 PMHS-----DLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVN 358
           P  S     D E L E    SY+  E     +  R + S    +L + ++++ +R     
Sbjct: 326 PDFSAIADGDKEALREQRFDSYDRREDRG--WGHRRVSSEREDRLDRRVYAEDER----- 370

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q6AT252.3e-3528.70Zinc finger CCCH domain-containing protein 34 OS=Oryza sativa subsp. japonica OX... [more]
Q6K9774.1e-3227.67Zinc finger CCCH domain-containing protein 19 OS=Oryza sativa subsp. japonica OX... [more]
Q0J9529.2e-3227.97Zinc finger CCCH domain-containing protein 32 OS=Oryza sativa subsp. japonica OX... [more]
Q9ZUM04.6e-3131.83Zinc finger CCCH domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q5ZJJ16.0e-0729.10Zinc finger CCCH domain-containing protein 11A OS=Gallus gallus OX=9031 GN=ZC3H1... [more]
Match NameE-valueIdentityDescription
A0A6J1HAR90.0e+00100.00zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita mosch... [more]
A0A6J1JJH09.7e-30395.10zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita maxim... [more]
A0A6J1JK291.9e-29081.11zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita maxim... [more]
A0A6J1HCV59.8e-279100.00zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita mosch... [more]
A0A6J1HAV58.1e-257100.00uncharacterized protein LOC111461673 isoform X3 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
AT2G02160.13.2e-3231.83CCCH-type zinc finger family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 527..547
NoneNo IPR availableGENE3D4.10.1000.10coord: 3..64
e-value: 1.7E-9
score: 39.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..525
NoneNo IPR availablePANTHERPTHR15725:SF0ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32-LIKEcoord: 1..533
NoneNo IPR availablePANTHERPTHR15725ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAININGcoord: 1..533
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 7..34
e-value: 0.097
score: 21.8
coord: 39..62
e-value: 0.14
score: 21.3
coord: 82..107
e-value: 0.69
score: 17.6
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 81..108
score: 12.783824
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 37..63
score: 9.751145
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 6..35
score: 10.511662
IPR041686Zinc-finger CCCH domainPFAMPF15663zf-CCCH_3coord: 6..63
e-value: 9.0E-11
score: 42.0
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 81..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G006040.1CmoCh10G006040.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding