Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATCTCCGCCATGTAAAATAAAAAAAGGAATTGAAAATTGAATTCCATGGAAGGCCGTCTATGACGATGATTTTGTTGCTGCTCTTCCACTTCTCTTACGCTCTCTCTTCTTCTTCTTCTTCCAATTCCTTCTGAGAAGAACACCAATGGGGGAAGATTTGCGTAAACGTAACACTGATTGCGTCTATTTCTTGGCTTCACCTCTTACCTGCAAGAAGGTCGGCTTTTCTCGCTTAATAAATAACAATCGTACCCCTTTTCACGTTACAATTCCTTCTCGATGTGAACACCGGAGAATTTGGTTCATGCTTCCATTATCTTATCACTACTGTGAGGATCTTGCTCTGCATTTGAAGGATTTTTTGTTGCATTCCGTCGAAATGCATCGGCATGATTATGTGTTTGAATTTACGCTGTCGATCATTAGATTTCTCGGTATTAATGTGGAATCGGGTTTTCGTGTTTATGTTTATGCATCGGCAACTGTTTTTTTTTTTTCAGGGTTTTGATTGTGAGTATCGGCACAGCGAGATTGCTAGGCTGAACCCTAGAGATTGTTACTACTGGCTGGCGGGAAACTGCTTAAATGCAGCCTGTGGTTTTCGGCATCCGGTAAGCTGACTATCTGTTTGTTAATATTCACCTGAGCTTGGTTGCAGTCGATGCCTGATTCATCTACCTTGTTTATACATGTTTAGCAATGAAACTTGTTTGGTCTGAACTCTTTCTTTGAATCTTCCAAGACTAAATTTAGGTTGAATTTACTGCCATTTTGTTGAAATTCTTTTCCTGGTTCTCAAGTTTGCATATGCCCTGTTCTGCTTTTGCTTGAAGGCTCAATCCCCATAGCTTTGGTATCTGTAATCACAAATTTGTGCATGTCAGGATGCAACTAAGAACATAGTTTTTTGTTTTGTAAATTTCATTTTGGAATGTAAGTTGTTTGGAAAGTAAGCAATGTTCTAGAGAATGTATTGTGCTAATTTAAGACATAAATTGAGGAAGTGATACTGTTTTTCGTTACTTTGTCACGCAATAAACAGCGGTGGTTTTCGTTTTTCCAAATATGTATTATAGCTCATCTTTATGGATGGATCCAAGAGCTAAGTATCTACACTGAAGGAGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGGAGAACGAAACATTATTTATAAGGGTGTAGAAACCTCTCCCTAACATGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGTGAAAGCCCAAAGAGAACAATATCTCAGTTAGAATGAAACATTCTTTATAAGGATGTGGAAACCTTTCCCTAACGCGTTTTAAAAACTTTGAGGGGAAGCCTGAAAGTAAAACCCCAAAGAGAACAATATCTCGGTTGGGGAGGAGAATGAAACATTCTTTATAAGGATGTGGAAACCTCTCCCTAGCGTGTTTTAAAAACCTTGAGGGGAAGCCCAAAAGTGAAACCCCAAAGAGAACAATATCAGCTAACGGTGAACTTGGGCCGTTACACAAAGAATCTCATGCATTTCAGTAGATTGTTACAAATGCAAATATTATAATGTTTTGTTGACCTTGTTCTAGGTGGTGAACACAAGTAATAATAAGAACTTGGGCCCTTACCTTGTGATTATCAATTTAAGTTGATGGTCTTCTAGGAACTTTATCATGCTCTCATTATGTAATACCATTGTGTTTAAAATTTTTGTTTTCCTTTTTCTCCTTAGCCAATGGATAGTCCTGCTGGAGCAGTGTTAGAATCTTCTCAATGTTCTGTACCTGTGAACAAGACAATCATTCCCTGTTATTTTTATTTCAATGGCTGCTGCAGTAAAGGTGATACATGCTCTTATTTGCATGCCAATGATATTTCTCTTGCTACAAGATCTACAAAGACAGTATTTCCTAGCGGCAACGCGTCGTCCTCTGAGGATAAAACAGCTTCAGGAAACAAAAAAGGACTAGCCTCTACCGACGCAGATGCATTTCTTCATCCATCGAAGAACGTAGCTGGTCCGAAAATTGATGTTACATTTCAATGCTCGAGTCTCGGTCAACCTTCTGAAAATGTTTCACATCAAAGTGCCTCTGCAAAGATCTTGTTGCTTGAGTGTGAAAAAGTGGCTGTTGATGAGCTTGTCTCCTCGTCTCCAGCTGTGGGATCTAATGACAGTACATCTCATATACATGCTGTTGCAGATCAGAGTTATGAGGAGCCGATGACGGACAGTACTGAGGAAGGCAACCTATCCCCTGGCTTTGACGTCGTCGTAGGTGATGGGTCGGGGAATTTGGCTAGCCACGATGATCCAGAGTACATCCTGTCAACTAATCTGGAACAGAGAGAACAGGATCCCGGATTGTGCAGGGAAAACTTTGAAGACCATATTGCCTATGAGCCAATGCATTCTGATTTAGAACTTCTTTATGAACATGAGATGCACTCATACAACCACTTAGAGACCGAACCTGTTCTTTTCAATGACAGAAACATCATCAGCTGTCCGAGAGGGAAACTCATCAAGTCCATGTTTTCTCAAAAGAAAAGGCTCACCCTCGTGAATCTAGATTCGGAGGAATGGAATCATGCCGACCTTCGAAGCTATCTGCAGAGAGACAGCGTTTCTGGCAACCGTTCGATTGTTAGTTTATCAAGGAGAAGAAATCAATTGTCATGTCGAATGAGTGGAAACTTTGTGAAACCTCGGAAGCCTGGTTTGTATCAACCACCCCTTGGAAGAAGACTAGCATTACAGGTCGGGAAGATTTCTAGAGTATCACCTCCAGAAAACATAACCTTTTCAAATGGTTTTAGTCAATATGGATCGTTCAGACACTCAAGACAACACAGACCCTGCGGTCACTACGACGAGTACGCTCCGACCACACCACAACAAACATTGTCAAACATGTCAAGAAAATCCATCTCGAGGGAACCTGTCGTAAGGGATCGTGGATTGAATCCGAAGTCAGTTCCATTCAAAGGACCGAAAACCCTTTCGCAGATCAAAGAAGAGAAGCGAAAAGTAGAAGAAAATGGAGGGTTCTCAATCGAAAAACGCCGTTCGATCGGAGCTGCATCATCTTCTACCGACTTTAGAGGGCCAAAACCTTTAAGTGATATCCTGAAAGACAAAAGGAAGGTGGAGGAGGAGGAGGAGCTGGTGAAGGAAATGAATAGAAATCATATATTGCTTTAGTTAGTGTTAGCTGAAACAGAAGCTCAACTTGAGTGTCTATGGCGGCCTTGCCATTCTTTTAACGGTCTTCATTCAGTATTTGAATGTATGCATCTGATCCTTAAACTTCCATATTCAGTTTAGGGTAAAATTGTTTTAGGTTGTAAAT
mRNA sequence
TGATCTCCGCCATGTAAAATAAAAAAAGGAATTGAAAATTGAATTCCATGGAAGGCCGTCTATGACGATGATTTTGTTGCTGCTCTTCCACTTCTCTTACGCTCTCTCTTCTTCTTCTTCTTCCAATTCCTTCTGAGAAGAACACCAATGGGGGAAGATTTGCGTAAACGTAACACTGATTGCGTCTATTTCTTGGCTTCACCTCTTACCTGCAAGAAGGGTTTTGATTGTGAGTATCGGCACAGCGAGATTGCTAGGCTGAACCCTAGAGATTGTTACTACTGGCTGGCGGGAAACTGCTTAAATGCAGCCTGTGGTTTTCGGCATCCGCCAATGGATAGTCCTGCTGGAGCAGTGTTAGAATCTTCTCAATGTTCTGTACCTGTGAACAAGACAATCATTCCCTGTTATTTTTATTTCAATGGCTGCTGCAGTAAAGGTGATACATGCTCTTATTTGCATGCCAATGATATTTCTCTTGCTACAAGATCTACAAAGACAGTATTTCCTAGCGGCAACGCGTCGTCCTCTGAGGATAAAACAGCTTCAGGAAACAAAAAAGGACTAGCCTCTACCGACGCAGATGCATTTCTTCATCCATCGAAGAACGTAGCTGGTCCGAAAATTGATGTTACATTTCAATGCTCGAGTCTCGGTCAACCTTCTGAAAATGTTTCACATCAAAGTGCCTCTGCAAAGATCTTGTTGCTTGAGTGTGAAAAAGTGGCTGTTGATGAGCTTGTCTCCTCGTCTCCAGCTGTGGGATCTAATGACAGTACATCTCATATACATGCTGTTGCAGATCAGAGTTATGAGGAGCCGATGACGGACAGTACTGAGGAAGGCAACCTATCCCCTGGCTTTGACGTCGTCGTAGGTGATGGGTCGGGGAATTTGGCTAGCCACGATGATCCAGAGTACATCCTGTCAACTAATCTGGAACAGAGAGAACAGGATCCCGGATTGTGCAGGGAAAACTTTGAAGACCATATTGCCTATGAGCCAATGCATTCTGATTTAGAACTTCTTTATGAACATGAGATGCACTCATACAACCACTTAGAGACCGAACCTGTTCTTTTCAATGACAGAAACATCATCAGCTGTCCGAGAGGGAAACTCATCAAGTCCATGTTTTCTCAAAAGAAAAGGCTCACCCTCGTGAATCTAGATTCGGAGGAATGGAATCATGCCGACCTTCGAAGCTATCTGCAGAGAGACAGCGTTTCTGGCAACCGTTCGATTGTTAGTTTATCAAGGAGAAGAAATCAATTGTCATGTCGAATGAGTGGAAACTTTGTGAAACCTCGGAAGCCTGGTTTGTATCAACCACCCCTTGGAAGAAGACTAGCATTACAGGTCGGGAAGATTTCTAGAGTATCACCTCCAGAAAACATAACCTTTTCAAATGGTTTTAGTCAATATGGATCGTTCAGACACTCAAGACAACACAGACCCTGCGGTCACTACGACGAGTACGCTCCGACCACACCACAACAAACATTGTCAAACATGTCAAGAAAATCCATCTCGAGGGAACCTGTCGTAAGGGATCGTGGATTGAATCCGAAGTCAGTTCCATTCAAAGGACCGAAAACCCTTTCGCAGATCAAAGAAGAGAAGCGAAAAGTAGAAGAAAATGGAGGGTTCTCAATCGAAAAACGCCGTTCGATCGGAGCTGCATCATCTTCTACCGACTTTAGAGGGCCAAAACCTTTAAGTGATATCCTGAAAGACAAAAGGAAGGTGGAGGAGGAGGAGGAGCTGGTGAAGGAAATGAATAGAAATCATATATTGCTTTAGTTAGTGTTAGCTGAAACAGAAGCTCAACTTGAGTGTCTATGGCGGCCTTGCCATTCTTTTAACGGTCTTCATTCAGTATTTGAATGTATGCATCTGATCCTTAAACTTCCATATTCAGTTTAGGGTAAAATTGTTTTAGGTTGTAAAT
Coding sequence (CDS)
ATGGGGGAAGATTTGCGTAAACGTAACACTGATTGCGTCTATTTCTTGGCTTCACCTCTTACCTGCAAGAAGGGTTTTGATTGTGAGTATCGGCACAGCGAGATTGCTAGGCTGAACCCTAGAGATTGTTACTACTGGCTGGCGGGAAACTGCTTAAATGCAGCCTGTGGTTTTCGGCATCCGCCAATGGATAGTCCTGCTGGAGCAGTGTTAGAATCTTCTCAATGTTCTGTACCTGTGAACAAGACAATCATTCCCTGTTATTTTTATTTCAATGGCTGCTGCAGTAAAGGTGATACATGCTCTTATTTGCATGCCAATGATATTTCTCTTGCTACAAGATCTACAAAGACAGTATTTCCTAGCGGCAACGCGTCGTCCTCTGAGGATAAAACAGCTTCAGGAAACAAAAAAGGACTAGCCTCTACCGACGCAGATGCATTTCTTCATCCATCGAAGAACGTAGCTGGTCCGAAAATTGATGTTACATTTCAATGCTCGAGTCTCGGTCAACCTTCTGAAAATGTTTCACATCAAAGTGCCTCTGCAAAGATCTTGTTGCTTGAGTGTGAAAAAGTGGCTGTTGATGAGCTTGTCTCCTCGTCTCCAGCTGTGGGATCTAATGACAGTACATCTCATATACATGCTGTTGCAGATCAGAGTTATGAGGAGCCGATGACGGACAGTACTGAGGAAGGCAACCTATCCCCTGGCTTTGACGTCGTCGTAGGTGATGGGTCGGGGAATTTGGCTAGCCACGATGATCCAGAGTACATCCTGTCAACTAATCTGGAACAGAGAGAACAGGATCCCGGATTGTGCAGGGAAAACTTTGAAGACCATATTGCCTATGAGCCAATGCATTCTGATTTAGAACTTCTTTATGAACATGAGATGCACTCATACAACCACTTAGAGACCGAACCTGTTCTTTTCAATGACAGAAACATCATCAGCTGTCCGAGAGGGAAACTCATCAAGTCCATGTTTTCTCAAAAGAAAAGGCTCACCCTCGTGAATCTAGATTCGGAGGAATGGAATCATGCCGACCTTCGAAGCTATCTGCAGAGAGACAGCGTTTCTGGCAACCGTTCGATTGTTAGTTTATCAAGGAGAAGAAATCAATTGTCATGTCGAATGAGTGGAAACTTTGTGAAACCTCGGAAGCCTGGTTTGTATCAACCACCCCTTGGAAGAAGACTAGCATTACAGGTCGGGAAGATTTCTAGAGTATCACCTCCAGAAAACATAACCTTTTCAAATGGTTTTAGTCAATATGGATCGTTCAGACACTCAAGACAACACAGACCCTGCGGTCACTACGACGAGTACGCTCCGACCACACCACAACAAACATTGTCAAACATGTCAAGAAAATCCATCTCGAGGGAACCTGTCGTAAGGGATCGTGGATTGAATCCGAAGTCAGTTCCATTCAAAGGACCGAAAACCCTTTCGCAGATCAAAGAAGAGAAGCGAAAAGTAGAAGAAAATGGAGGGTTCTCAATCGAAAAACGCCGTTCGATCGGAGCTGCATCATCTTCTACCGACTTTAGAGGGCCAAAACCTTTAAGTGATATCCTGAAAGACAAAAGGAAGGTGGAGGAGGAGGAGGAGCTGGTGAAGGAAATGAATAGAAATCATATATTGCTTTAG
Protein sequence
MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEELVKEMNRNHILL
Homology
BLAST of CmoCh10G006040 vs. ExPASy Swiss-Prot
Match:
Q6AT25 (Zinc finger CCCH domain-containing protein 34 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0176400 PE=2 SV=1)
HSP 1 Score: 151.8 bits (382), Expect = 2.3e-35
Identity = 155/540 (28.70%), Postives = 230/540 (42.59%), Query Frame = 0
Query: 6 RKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMDS 65
R+ NTDCVYFLASP TC KG CEYRH++ AR N R+C+YW GNC+N +C FRHPP+++
Sbjct: 14 RRCNTDCVYFLASPFTCTKGSKCEYRHADGARFNRRNCWYWFKGNCVNPSCTFRHPPLEN 73
Query: 66 ---PAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPS 125
S CS V K PCYFY+N CSKGD C YLH S
Sbjct: 74 LNKTKSLADPLSLCSTSV-KAANPCYFYYNSHCSKGDNCPYLH------------EPLTS 133
Query: 126 GNASSSEDKTASGNKKGLASTDADAFLHPSKN-VAGPKIDVTFQCSSLGQPSENVSHQSA 185
+A + K + N S D + SK+ + P D + + S N A
Sbjct: 134 NDAVGTSCKATTSNPAVSKSYVGDEMVEESKDTITNPCQDTSCHIKEV-PVSINPEFGEA 193
Query: 186 SAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTE--EGNLSPGF 245
A LE +DE + S AV+D + + D TE E + SPGF
Sbjct: 194 EAVSGALE-TSTDIDEYMKCS-------------AVSDLNSGDSTMDHTEQDERDSSPGF 253
Query: 246 DVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEM 305
DV+V D L++ D E+ L+T + + D + Y+ +Y H+
Sbjct: 254 DVLVDD---CLSNKSDLEHQLTTESDNKVLH---AEYGIRDPVLYD--------MYYHDP 313
Query: 306 HSYNHLETEPVLFNDRN---IISCPRGKLIKSMFSQKKRLTLVNL---DSEEWNHADLRS 365
YN+ E E +DR + P G + +TL +L ++E + R
Sbjct: 314 EYYNY-EPEFCGLDDRQGYLYLCQPNG-----AHEHESEITLGHLLPQNTEVTSDEYDRR 373
Query: 366 YLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSP 425
+ + + + + + + Q+ + R+P + G++ + K SR
Sbjct: 374 FFNPRNFTSSVADTNFVHQHTQI------RHISKRRPENRKGAKGKKDCI---KRSRCLE 433
Query: 426 PENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLN 485
P+N T Q +RQ + + P + ++ V+ +
Sbjct: 434 PKNST------QQIESMPTRQRKDYLMGECPQPANHATFRGRRKKNRGKQQHVLSAKSSE 488
Query: 486 PKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRK 534
+ F GPKTL+QIKEEK K N FS + S S DF GPK L+++L K +
Sbjct: 494 HPTADFTGPKTLAQIKEEKCK--SNSSFSHSTACTPNVRSFSDDFEGPKSLTELLMTKSR 488
BLAST of CmoCh10G006040 vs. ExPASy Swiss-Prot
Match:
Q6K977 (Zinc finger CCCH domain-containing protein 19 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0831100 PE=2 SV=2)
HSP 1 Score: 141.0 bits (354), Expect = 4.1e-32
Identity = 158/571 (27.67%), Postives = 231/571 (40.46%), Query Frame = 0
Query: 3 EDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
E R+R+TDC+YFLASPLTCKKG +CEYRHS+ AR+NPRDC+YW GNC N C FRHPP
Sbjct: 13 EARRRRSTDCIYFLASPLTCKKGSECEYRHSDAARMNPRDCWYWFNGNCANPKCSFRHPP 72
Query: 63 MDSPAGAVL-------ESSQCSVPVNKTI-----------IPCYFYFNGCCSKGDTCSYL 122
+D GA + Q SVP + +PCY++ G C KGD C++L
Sbjct: 73 LDGLVGAPTTPRTSQQSAPQVSVPAQAPVPNPASGTAKQGVPCYYFQKGMCVKGDRCAFL 132
Query: 123 HANDI--SLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDAD--AFLHPSKNVAGPKI 182
H S A + T VF + + K + A +A F P + K
Sbjct: 133 HLPQATGSPAPQHTTKVFAPASVPHPQLKNSWTKPNSSAQQNAPPAIFDKPKDSAHNGKT 192
Query: 183 DVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQ 242
++ S + H + + V + P+ G D + +
Sbjct: 193 AQKQNLTNRAGHSSGIIHDKKGSYM------PSGVTKNYRPPPSTG--DDLAENGVEMGE 252
Query: 243 SYEEPMTDSTEEGNLSPGFDVVVGDGSGNL--ASHDDPEYILSTNLEQREQDPGLCRENF 302
EP SPG DV+ G N + +D TN EQ G+ R+
Sbjct: 253 FVREP----------SPGSDVLTGGADDNTEQSLREDRGAYRRTN---GEQHIGMLRQT- 312
Query: 303 EDHIAYEPMH--SDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL 362
D +E H S +LL E ++ E P+ + ++ R +L+K R
Sbjct: 313 HDSYGFERSHRGSAEKLLSESR---FSQREPMPLTADSSDL----RQRLLKQRRLNNPRS 372
Query: 363 TLV----NLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGL 422
V N+ E+ H R QR + VS SR R ++ F + GL
Sbjct: 373 GQVSDRHNVYPEDERHDRHR---QRGEEQASNDGVSSSRLRGRIRLPAETTF---DRLGL 432
Query: 423 YQPPLGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQT 482
QP R G +R+SPP G + P +
Sbjct: 433 -QPEKER----DRGPRARLSPPSQTDLR------------------GKLHDRLKAKPNED 492
Query: 483 LSNMSRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEK-----RKVEENGGFSIEKRR 536
+S + S+S+ + +S+ F GPK+L+++K +K K + +
Sbjct: 493 VSGNVQSSLSK------ANEDAESLNFAGPKSLAELKAKKVAGSLMKSSRSLTGPVRMTS 519
BLAST of CmoCh10G006040 vs. ExPASy Swiss-Prot
Match:
Q0J952 (Zinc finger CCCH domain-containing protein 32 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0671800 PE=2 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 9.2e-32
Identity = 165/590 (27.97%), Postives = 241/590 (40.85%), Query Frame = 0
Query: 3 EDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
E+ +RNTDCVYFLASPLTCKKG +C++RHS+ AR+NPRDC+YWL NCLN C FRHPP
Sbjct: 28 EEALRRNTDCVYFLASPLTCKKGNECDFRHSDNARMNPRDCWYWLNSNCLNPKCPFRHPP 87
Query: 63 MDSPAGA------VLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRST 122
+D GA + S K ++PCY++ G C KGD C++ H S+ +
Sbjct: 88 IDGMFGAPTTGMPAVSSHYAPFNSGKQLVPCYYFKKGNCLKGDRCAFYHGPQ-SVGNNPS 147
Query: 123 KTVFPSGNASSSEDKTAS----GNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQP 182
+ V + + +T G K + ST++ P N G + +
Sbjct: 148 EQVVKVSSLPLEQLQTQKNDLLGIKDSVQSTNSIQHGAPITNERGK--TAVDRSTVNSAR 207
Query: 183 SENVSHQSASAKILLLECEKV------AVDELVSSS-----PAVGSNDSTSHIHAVAD-- 242
+ V+ AS + + EKV A+ E ++S P N V D
Sbjct: 208 TATVAIPVASNAMSCPKSEKVKSSTPAALKESFTTSSGGDHPECYQNHFPMDSDPVRDWN 267
Query: 243 QSYEEPMTDSTEE---------GNLSPGFDVVV-GDGSGNLASHDDPEYILSTNLEQREQ 302
QSYE P D + G SPGFDV+V D G HD +
Sbjct: 268 QSYEMPPADDLPQNSREADELLGESSPGFDVLVDNDADGAAYLHD--------------E 327
Query: 303 DPGLCRENFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVL------FNDRNIISCPRG 362
D G ED YE +D ++ HE +N ++ + + + + S R
Sbjct: 328 DFGGDMYPVED---YEYAPADFDVRAHHERERFNGMDEQDQMGHMYDGYERKRRRSSERS 387
Query: 363 KLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGN 422
++ F ++R + D E + +DLR L+R + N S +++S RN R
Sbjct: 388 --MERPFHSERRFLQRDRDRVEMDGSDLRHRLRRRRI--NESSLAISPERNGEQRRRDER 447
Query: 423 FVKPRKPG------LYQPPLGRRLALQVG---KISRVSPPENITFSNGFSQYGSFR---- 482
+ + R G +Q G L+ ++ K+ SP T S R
Sbjct: 448 Y-RERAHGHRSHRDHHQSSRGSTLSSRLQGRIKLPGRSPDRVDTRSEKERDRRRLRDRLS 507
Query: 483 -------HSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGPK 534
+HR G ++E QT S ++ D K VP
Sbjct: 508 PVRRTEFQGTRHREAGQHEE-------QTQRRSSELALGSRNA--DGQHLTKDVP--DSH 567
BLAST of CmoCh10G006040 vs. ExPASy Swiss-Prot
Match:
Q9ZUM0 (Zinc finger CCCH domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=At2g02160 PE=1 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 4.6e-31
Identity = 120/377 (31.83%), Postives = 172/377 (45.62%), Query Frame = 0
Query: 3 EDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
ED K NTDCVYFLASPLTCKKG +CEYRHSE AR+NPRDCYYWL GNCLN CGFRHPP
Sbjct: 26 EDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWLNGNCLNPKCGFRHPP 85
Query: 63 MD--------SPAGAV--LESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHA-NDISL 122
++ +PA +V + ++ V K +PC F+ G C KGD CS+LH N +
Sbjct: 86 LEGLLGNQGGAPAVSVQPIHATAQHPSVAKQPVPCLFFQKGMCMKGDMCSFLHTPNPAAY 145
Query: 123 ATRSTKTVFPSGNASSSEDKTASG-NKKGLASTDADAFLHPSKNV-AGPKIDVTFQCSSL 182
+ P+ + S+ + +K L + + ++ A P++ T S
Sbjct: 146 KKQHPVEAKPATDPQCSKKPIENNTEEKKLPDVNLSKVVKGHTDISAAPRVASTGLRDSR 205
Query: 183 GQPSENVSHQSASAKILLLECEKVAVDELVSSSPAV---GSNDSTS-HIHAVADQSYEEP 242
+H + + E S+ + GS+D+ S H AD E
Sbjct: 206 SVEGYIPNHVGYEPVVQRKGPGFPSFTEGGHSTQLLQKYGSDDNNSFHNGKDADDVLRES 265
Query: 243 MTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYE 302
SPGFDV+V + +G D Y + +R Q+ G + Y+
Sbjct: 266 ----------SPGFDVLVDNEAG-----DSEYYHVEDRYGRRSQERG--------NSEYD 325
Query: 303 PMHS-----DLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVN 358
P S D E L E SY+ E + R + S +L + ++++ +R
Sbjct: 326 PDFSAIADGDKEALREQRFDSYDRREDRG--WGHRRVSSEREDRLDRRVYAEDER----- 370
BLAST of CmoCh10G006040 vs. ExPASy Swiss-Prot
Match:
Q5ZJJ1 (Zinc finger CCCH domain-containing protein 11A OS=Gallus gallus OX=9031 GN=ZC3H11A PE=2 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 6.0e-07
Identity = 39/134 (29.10%), Postives = 57/134 (42.54%), Query Frame = 0
Query: 5 LRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMD 64
+ K+ DC ++ S TC KG +C +RH E A N C W G C C FRH +D
Sbjct: 1 MSKQGDDCYFYFYS--TCNKGDNCPFRHCEAALGNETICTLWKEGRCFRNVCRFRHMEID 60
Query: 65 SPAGAVLESSQCSVPVNKTIIPCYFYFN-GCCSKGDTCSYLHAND---ISLATRSTKTVF 124
++ IPC++ G C K + C++ H L +KT
Sbjct: 61 K---------------KRSEIPCFWENQPGGCQKSN-CAFHHTKGRYVDGLFLPPSKTTL 116
Query: 125 PSGNASSSEDKTAS 135
PS S+ +D A+
Sbjct: 121 PSPPESADDDLKAA 116
BLAST of CmoCh10G006040 vs. ExPASy TrEMBL
Match:
A0A6J1HAR9 (zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461673 PE=4 SV=1)
HSP 1 Score: 1112.1 bits (2875), Expect = 0.0e+00
Identity = 551/551 (100.00%), Postives = 551/551 (100.00%), Query Frame = 0
Query: 1 MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH
Sbjct: 1 MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
Query: 61 PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120
PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF
Sbjct: 61 PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120
Query: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFD 240
ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFD 240
Query: 241 VVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
VVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
Query: 361 SGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420
SGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420
Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFK 480
NGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFK 480
Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEL 540
GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEL
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEL 540
Query: 541 VKEMNRNHILL 552
VKEMNRNHILL
Sbjct: 541 VKEMNRNHILL 551
BLAST of CmoCh10G006040 vs. ExPASy TrEMBL
Match:
A0A6J1JJH0 (zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485142 PE=4 SV=1)
HSP 1 Score: 1048.5 bits (2710), Expect = 9.7e-303
Identity = 524/551 (95.10%), Postives = 531/551 (96.37%), Query Frame = 0
Query: 1 MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIAR+NPRDCYYWLAGNCLNAACGFRH
Sbjct: 1 MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARVNPRDCYYWLAGNCLNAACGFRH 60
Query: 61 PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120
PPMDSPAG VLESS CSVPVNKTIIPCYFYFNGCCSKGDTCS+LHANDISLATRSTKTVF
Sbjct: 61 PPMDSPAGTVLESSLCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120
Query: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
PSGNASSSEDKTASGNKKGL STDADAFLHPSK VA PKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLDSTDADAFLHPSKKVACPKIDVTFQCSSLGQPSENVSHQS 180
Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFD 240
ASAKILLLECEKVAVDEL+SSSPAVGSNDSTSH+HAVADQ YEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELLSSSPAVGSNDSTSHVHAVADQRYEEPMTDSTEEGNLSPGFD 240
Query: 241 VVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
VVVGDGSGNLASHDDPEY+LSTNLEQRE D GLCRENFEDHIAYE MHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYVLSTNLEQRELDTGLCRENFEDHIAYESMHSDLELLYEHEMH 300
Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
SYNHLETEPVLFNDRNIISCPR KLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRRKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
Query: 361 SGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420
SGNRSIVSLSRRRN LSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISR SPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNGLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420
Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFK 480
NGFSQYGSFRHSRQHRPCGHYDEYAPT PQQTL +MSRKSI REPVVRDRG N KSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLDMSRKSILREPVVRDRGFNLKSVPFK 480
Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEL 540
GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSS DFRGPK LSDILKDKRKV EEEEL
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSADFRGPKALSDILKDKRKV-EEEEL 540
Query: 541 VKEMNRNHILL 552
VKEMNR+HILL
Sbjct: 541 VKEMNRHHILL 550
BLAST of CmoCh10G006040 vs. ExPASy TrEMBL
Match:
A0A6J1JK29 (zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485142 PE=4 SV=1)
HSP 1 Score: 1007.7 bits (2604), Expect = 1.9e-290
Identity = 524/646 (81.11%), Postives = 531/646 (82.20%), Query Frame = 0
Query: 1 MGEDLRKRNTDCVYFLASPLTCKK------------------------------------ 60
MGEDLRKRNTDCVYFLASPLTCKK
Sbjct: 1 MGEDLRKRNTDCVYFLASPLTCKKVSFSCLINNNRTSFHVTIPSRCEHRGIWLMLPLSYH 60
Query: 61 -----------------------------------------------------------G 120
G
Sbjct: 61 YCEDLALHLKDFLLHSLEMHRRDYVFEFTLSIIRFLGFNVESAFRVYVYVMNMATIFFQG 120
Query: 121 FDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMDSPAGAVLESSQCSVPVNKTII 180
FDCEYRHSEIAR+NPRDCYYWLAGNCLNAACGFRHPPMDSPAG VLESS CSVPVNKTII
Sbjct: 121 FDCEYRHSEIARVNPRDCYYWLAGNCLNAACGFRHPPMDSPAGTVLESSLCSVPVNKTII 180
Query: 181 PCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDA 240
PCYFYFNGCCSKGDTCS+LHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGL STDA
Sbjct: 181 PCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLDSTDA 240
Query: 241 DAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAV 300
DAFLHPSK VA PKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDEL+SSSPAV
Sbjct: 241 DAFLHPSKKVACPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELLSSSPAV 300
Query: 301 GSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLE 360
GSNDSTSH+HAVADQ YEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEY+LSTNLE
Sbjct: 301 GSNDSTSHVHAVADQRYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYVLSTNLE 360
Query: 361 QREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKL 420
QRE D GLCRENFEDHIAYE MHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPR KL
Sbjct: 361 QRELDTGLCRENFEDHIAYESMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRRKL 420
Query: 421 IKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFV 480
IKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRN LSCRMSGNFV
Sbjct: 421 IKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNGLSCRMSGNFV 480
Query: 481 KPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYA 540
KPRKPGLYQPPLGRRLALQVGKISR SPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYA
Sbjct: 481 KPRKPGLYQPPLGRRLALQVGKISRGSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYA 540
Query: 541 PTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEK 552
PT PQQTL +MSRKSI REPVVRDRG N KSVPFKGPKTLSQIKEEKRKVEENGGFSIEK
Sbjct: 541 PTRPQQTLLDMSRKSILREPVVRDRGFNLKSVPFKGPKTLSQIKEEKRKVEENGGFSIEK 600
BLAST of CmoCh10G006040 vs. ExPASy TrEMBL
Match:
A0A6J1HCV5 (zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461673 PE=4 SV=1)
HSP 1 Score: 968.8 bits (2503), Expect = 9.8e-279
Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0
Query: 63 MDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPS 122
MDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPS
Sbjct: 1 MDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPS 60
Query: 123 GNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSAS 182
GNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSAS
Sbjct: 61 GNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSAS 120
Query: 183 AKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFDVV 242
AKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFDVV
Sbjct: 121 AKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFDVV 180
Query: 243 VGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMHSY 302
VGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMHSY
Sbjct: 181 VGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMHSY 240
Query: 303 NHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSG 362
NHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSG
Sbjct: 241 NHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSG 300
Query: 363 NRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNG 422
NRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNG
Sbjct: 301 NRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNG 360
Query: 423 FSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGP 482
FSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGP
Sbjct: 361 FSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGP 420
Query: 483 KTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEELVK 542
KTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEELVK
Sbjct: 421 KTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEELVK 480
Query: 543 EMNRNHILL 552
EMNRNHILL
Sbjct: 481 EMNRNHILL 489
BLAST of CmoCh10G006040 vs. ExPASy TrEMBL
Match:
A0A6J1HAV5 (uncharacterized protein LOC111461673 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111461673 PE=4 SV=1)
HSP 1 Score: 896.0 bits (2314), Expect = 8.1e-257
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0
Query: 97 KGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVA 156
KGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVA
Sbjct: 10 KGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVA 69
Query: 157 GPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHA 216
GPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHA
Sbjct: 70 GPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHA 129
Query: 217 VADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRE 276
VADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRE
Sbjct: 130 VADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRE 189
Query: 277 NFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL 336
NFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL
Sbjct: 190 NFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL 249
Query: 337 TLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPP 396
TLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPP
Sbjct: 250 TLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPP 309
Query: 397 LGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNM 456
LGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNM
Sbjct: 310 LGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNM 369
Query: 457 SRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST 516
SRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST
Sbjct: 370 SRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST 429
Query: 517 DFRGPKPLSDILKDKRKVEEEEELVKEMNRNHILL 552
DFRGPKPLSDILKDKRKVEEEEELVKEMNRNHILL
Sbjct: 430 DFRGPKPLSDILKDKRKVEEEEELVKEMNRNHILL 464
BLAST of CmoCh10G006040 vs. TAIR 10
Match:
AT2G02160.1 (CCCH-type zinc finger family protein )
HSP 1 Score: 137.5 bits (345), Expect = 3.2e-32
Identity = 120/377 (31.83%), Postives = 172/377 (45.62%), Query Frame = 0
Query: 3 EDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
ED K NTDCVYFLASPLTCKKG +CEYRHSE AR+NPRDCYYWL GNCLN CGFRHPP
Sbjct: 26 EDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWLNGNCLNPKCGFRHPP 85
Query: 63 MD--------SPAGAV--LESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHA-NDISL 122
++ +PA +V + ++ V K +PC F+ G C KGD CS+LH N +
Sbjct: 86 LEGLLGNQGGAPAVSVQPIHATAQHPSVAKQPVPCLFFQKGMCMKGDMCSFLHTPNPAAY 145
Query: 123 ATRSTKTVFPSGNASSSEDKTASG-NKKGLASTDADAFLHPSKNV-AGPKIDVTFQCSSL 182
+ P+ + S+ + +K L + + ++ A P++ T S
Sbjct: 146 KKQHPVEAKPATDPQCSKKPIENNTEEKKLPDVNLSKVVKGHTDISAAPRVASTGLRDSR 205
Query: 183 GQPSENVSHQSASAKILLLECEKVAVDELVSSSPAV---GSNDSTS-HIHAVADQSYEEP 242
+H + + E S+ + GS+D+ S H AD E
Sbjct: 206 SVEGYIPNHVGYEPVVQRKGPGFPSFTEGGHSTQLLQKYGSDDNNSFHNGKDADDVLRES 265
Query: 243 MTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYE 302
SPGFDV+V + +G D Y + +R Q+ G + Y+
Sbjct: 266 ----------SPGFDVLVDNEAG-----DSEYYHVEDRYGRRSQERG--------NSEYD 325
Query: 303 PMHS-----DLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVN 358
P S D E L E SY+ E + R + S +L + ++++ +R
Sbjct: 326 PDFSAIADGDKEALREQRFDSYDRREDRG--WGHRRVSSEREDRLDRRVYAEDER----- 370
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q6AT25 | 2.3e-35 | 28.70 | Zinc finger CCCH domain-containing protein 34 OS=Oryza sativa subsp. japonica OX... | [more] |
Q6K977 | 4.1e-32 | 27.67 | Zinc finger CCCH domain-containing protein 19 OS=Oryza sativa subsp. japonica OX... | [more] |
Q0J952 | 9.2e-32 | 27.97 | Zinc finger CCCH domain-containing protein 32 OS=Oryza sativa subsp. japonica OX... | [more] |
Q9ZUM0 | 4.6e-31 | 31.83 | Zinc finger CCCH domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Q5ZJJ1 | 6.0e-07 | 29.10 | Zinc finger CCCH domain-containing protein 11A OS=Gallus gallus OX=9031 GN=ZC3H1... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HAR9 | 0.0e+00 | 100.00 | zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita mosch... | [more] |
A0A6J1JJH0 | 9.7e-303 | 95.10 | zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita maxim... | [more] |
A0A6J1JK29 | 1.9e-290 | 81.11 | zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita maxim... | [more] |
A0A6J1HCV5 | 9.8e-279 | 100.00 | zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita mosch... | [more] |
A0A6J1HAV5 | 8.1e-257 | 100.00 | uncharacterized protein LOC111461673 isoform X3 OS=Cucurbita moschata OX=3662 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT2G02160.1 | 3.2e-32 | 31.83 | CCCH-type zinc finger family protein | [more] |