CmoCh10G005800 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh10G005800
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
LocationCmo_Chr10: 2645145 .. 2647735 (-)
RNA-Seq ExpressionCmoCh10G005800
SyntenyCmoCh10G005800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCATACTTCCAGAAGAATGCTTCTGAGAAGTGCTTCGACTCCCCTTCTCAATTCATGGTTACACCATTCCAGAGATTCATCTGTAGAGACCGAGATTGTGCACCACATCCCAAAATCGCGTTCCATTGTCTTCTCTGGTTCGCCTAGTTGCTTATCTCCGATAATTGACGATTCTCCCCGGAGGATTACTCGGGCGCTTTCCGAGACGGATCTTCGGGACCTGTCCGTGTCTAGGACGAAACCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGTTGGCCGAAGAGACAGATGCGGTAGGGTTTAGCCCCTCCGAAATGACGTCTTTGAGCTGTGGGTCGATTTCGGAAACGGGAGATGGTGATGGTAGGTTTGTTAATGTTCTTGTTGGAGGTGGAGTTGGTGCTAGTGGTGGAAGTATCCATGGTGGCGGAGGCGGATCCGACGGTGGCGATGATGGGAGTTTTGGGTTTGGAGATTCGAATCATGGGAATGAGAGTACGGATCTGTACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCTCGCTTCTTGAAAGAGGTAAATATATGATCGAAGAACAAATGCTGTTCGATTTCAAACATTCGTACTATTTTTTTTGTATTTATGATTACTTGTTTCGGGTATTAGGTTCGTGGGGATCTTGTAAAAGCTCAAGAGTATTGTGGGAGAGCAATTTTGAGCAATCCGGGTGATGGTAATGTATTGTCCATGTACGCTGACTTGATATGGGAAACTCAAAAGGACTCTCCAAGAGCCGAGAGTTACCATAATCAGGCTGTTAAAGCTGCCCCTGAAGACTGGTAAGCTTTTGGATTTGATGATGAGATTCTTACTGTGGTTGTTTAATGGCATATTCATTGATTGCTTTTATGGTAGCAGTTATGTTCTAGCATCTTACGCACGCTTCCTTTGGGATGCTGAAGAAGAGGAAGAAGAACAAGAAGAACAAGAAGAAGAGAGTCTTAGAGAAGAACCAGCAACGAGGTTCTTCCAAGGAGTTCACCCTCCGCCGCCTATTGCTGCTGCTTCTTAGTTAGTTCTTAGACTTCTTTTGGCTTCATTTCTTTTGTGCTATAGCTTCGAAGATAACAGCTCTGGACCCTGTTTATATTCCCTTCTTGGCCTTAGTATTGATATCATCCATAGATATTGAATTTCCCCCTATGGAGTGAAAGTTGTAGAAAGGAAATAAGATATATGTTAGCTTAATACTTCGCGAGTACTCTATATCTGTTGTTACTGTGCTGCATTTGTTGATCCCGAGGGAAACGAGTGTCAGCGCTCTTGCTGGCATACCACCCTGTGTCCACCCTTTTGGGGTTCAACGTCCTCGCTCACATATCACCTCCTTTTCCTTACAAGCTTCCCTTCAAAGTTTTAAAAATGTGTCTACTGGAGGGAGGTTTCCACACTCTTGTAAAGAATGTTTCGTTCTCTTCTCCAACCAATATGGTCACACCCTTGTAAAGAATGCTTCGTTCTCTTCTCCAACCAATATGGTCACACCCTTGTAAAGAATATTTCGTTTCCCTCTCCAGCTGATGTGACCACACCCTTATAAAGAAAGCTTTGTTCCCTTCTCCAACGGATGTTGCCACACATTTATAACGAATGCTTCGTCCTCTTTTCAAACTAGTGTGGGATTTCCTAGTTACTTTCTTTGTCAGTTTCTTCTTCATGTCTTCCTATTAGGTTTGCTTTTTTCAACAGTCGAACATGGTGGATGGTGGTGGTGGTTCGAATGTTTGACATTTTATCTTGTCTGCTTGCTGTTGAAGATCGTCCAAGTATTCCCTATCCAGACAATTTGGATAAGACAACGATTTATTAGCTTGTAGTACCTCTTTGGCGAACTGCTGTTAACAGGGTACTAAGTAATTTATGGAGTTTGGTTCAACTTCAAAGGGATCCAAAACCAGCCTAGAACAGAGCCAACAACCATGACAGTGGCAGATAACTCTGCCTCAGTACTGATCACGATGACACTTGCCAGTTCGGTTTTCAGCCACCTTGGTTGTAGCTGATCTCTCACAATAGCTTTTTCACCTTCCATTTTCATGTTCAAGTGTTTTTCTGGGTTGTGCTGTTGTTGGGAATTTGAAACTATTCAAAGCTTAGGCTAAGCAGCACTGCCACCGAGGCTGCCAAGATTGGTGACTGTAATTTGTAGACTGTTTGAGCTTTTTGAATGTTTATCACCATTAAAAACACCTTCCCTCAGTCACCACCATGGGAGGGACTCTTTGAAGCTCTTTACTGAAACGACTGGCAGCTCAGTTTGCTTGGATCGCAGATGATTGATGGGATGACCTTGGAACGGATATGACTCATGAAAGTAAGCTTTGTGGGGGCAAGAAAATTGGACTGTATTACTTTTATCGCTTTCGTGACGTATAGTTTCTTTATTGTATTTTCTAGAGGATGATGTTTCGACGGAATCATGTCTCTGTTTGGTAAATCAGAAATGCCTCAGAATGGACTATAAGGAGATACGACTAGTCGTCAATTCTTCCTACTCGGAGTTATATGTTATCTAAGCCGCTG

mRNA sequence

TCCATACTTCCAGAAGAATGCTTCTGAGAAGTGCTTCGACTCCCCTTCTCAATTCATGGTTACACCATTCCAGAGATTCATCTGTAGAGACCGAGATTGTGCACCACATCCCAAAATCGCGTTCCATTGTCTTCTCTGGTTCGCCTAGTTGCTTATCTCCGATAATTGACGATTCTCCCCGGAGGATTACTCGGGCGCTTTCCGAGACGGATCTTCGGGACCTGTCCGTGTCTAGGACGAAACCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGTTGGCCGAAGAGACAGATGCGGTAGGGTTTAGCCCCTCCGAAATGACGTCTTTGAGCTGTGGGTCGATTTCGGAAACGGGAGATGGTGATGGTAGGTTTGTTAATGTTCTTGTTGGAGGTGGAGTTGGTGCTAGTGGTGGAAGTATCCATGGTGGCGGAGGCGGATCCGACGGTGGCGATGATGGGAGTTTTGGGTTTGGAGATTCGAATCATGGGAATGAGAGTACGGATCTGTACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCTCGCTTCTTGAAAGAGGTTCGTGGGGATCTTGTAAAAGCTCAAGAGTATTGTGGGAGAGCAATTTTGAGCAATCCGGGTGATGGTAATGTATTGTCCATGTACGCTGACTTGATATGGGAAACTCAAAAGGACTCTCCAAGAGCCGAGAGTTACCATAATCAGGCTGTTAAAGCTGCCCCTGAAGACTGCAGTTATGTTCTAGCATCTTACGCACGCTTCCTTTGGGATGCTGAAGAAGAGGAAGAAGAACAAGAAGAACAAGAAGAAGAGAGTCTTAGAGAAGAACCAGCAACGAGGTTCTTCCAAGGAGTTCACCCTCCGCCGCCTATTGCTGCTGCTTCTTAGTTAGTTCTTAGACTTCTTTTGGCTTCATTTCTTTTGTGCTATAGCTTCGAAGATAACAGCTCTGGACCCTGTTTATATTCCCTTCTTGGCCTTAGTATTGATATCATCCATAGATATTGAATTTCCCCCTATGGAGTGAAAGTTGTAGAAAGGAAATAAGATATATGTTAGCTTAATACTTCGCGAGTACTCTATATCTGTTGTTACTGTGCTGCATTTGTTGATCCCGAGGGAAACGAGTGTCAGCGCTCTTGCTGGCATACCACCCTGTGTCCACCCTTTTGGGGTTCAACGTCCTCGCTCACATATCACCTCCTTTTCCTTACAAGCTTCCCTTCAAAGTTTTAAAAATGTGTCTACTGGAGGGAGGTTTCCACACTCTTGTAAAGAATGTTTCGTTCTCTTCTCCAACCAATATGGTCACACCCTTGTAAAGAATGCTTCGTTCTCTTCTCCAACCAATATGGTCACACCCTTGTAAAGAATATTTCGTTTCCCTCTCCAGCTGATGTGACCACACCCTTATAAAGAAAGCTTTGTTCCCTTCTCCAACGGATGTTGCCACACATTTATAACGAATGCTTCGTCCTCTTTTCAAACTAGTGTGGGATTTCCTAGTTACTTTCTTTGTCAGTTTCTTCTTCATGTCTTCCTATTAGGTTTGCTTTTTTCAACAGTCGAACATGGTGGATGGTGGTGGTGGTTCGAATGTTTGACATTTTATCTTGTCTGCTTGCTGTTGAAGATCGTCCAAGTATTCCCTATCCAGACAATTTGGATAAGACAACGATTTATTAGCTTGTAGTACCTCTTTGGCGAACTGCTGTTAACAGGGTACTAAGTAATTTATGGAGTTTGGTTCAACTTCAAAGGGATCCAAAACCAGCCTAGAACAGAGCCAACAACCATGACAGTGGCAGATAACTCTGCCTCAGTACTGATCACGATGACACTTGCCAGTTCGGTTTTCAGCCACCTTGGTTGTAGCTGATCTCTCACAATAGCTTTTTCACCTTCCATTTTCATGTTCAAGTGTTTTTCTGGGTTGTGCTGTTGTTGGGAATTTGAAACTATTCAAAGCTTAGGCTAAGCAGCACTGCCACCGAGGCTGCCAAGATTGGTGACTGTAATTTGTAGACTGTTTGAGCTTTTTGAATGTTTATCACCATTAAAAACACCTTCCCTCAGTCACCACCATGGGAGGGACTCTTTGAAGCTCTTTACTGAAACGACTGGCAGCTCAGTTTGCTTGGATCGCAGATGATTGATGGGATGACCTTGGAACGGATATGACTCATGAAAGTAAGCTTTGTGGGGGCAAGAAAATTGGACTGTATTACTTTTATCGCTTTCGTGACGTATAGTTTCTTTATTGTATTTTCTAGAGGATGATGTTTCGACGGAATCATGTCTCTGTTTGGTAAATCAGAAATGCCTCAGAATGGACTATAAGGAGATACGACTAGTCGTCAATTCTTCCTACTCGGAGTTATATGTTATCTAAGCCGCTG

Coding sequence (CDS)

ATGCTTCTGAGAAGTGCTTCGACTCCCCTTCTCAATTCATGGTTACACCATTCCAGAGATTCATCTGTAGAGACCGAGATTGTGCACCACATCCCAAAATCGCGTTCCATTGTCTTCTCTGGTTCGCCTAGTTGCTTATCTCCGATAATTGACGATTCTCCCCGGAGGATTACTCGGGCGCTTTCCGAGACGGATCTTCGGGACCTGTCCGTGTCTAGGACGAAACCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGTTGGCCGAAGAGACAGATGCGGTAGGGTTTAGCCCCTCCGAAATGACGTCTTTGAGCTGTGGGTCGATTTCGGAAACGGGAGATGGTGATGGTAGGTTTGTTAATGTTCTTGTTGGAGGTGGAGTTGGTGCTAGTGGTGGAAGTATCCATGGTGGCGGAGGCGGATCCGACGGTGGCGATGATGGGAGTTTTGGGTTTGGAGATTCGAATCATGGGAATGAGAGTACGGATCTGTACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCTCGCTTCTTGAAAGAGGTTCGTGGGGATCTTGTAAAAGCTCAAGAGTATTGTGGGAGAGCAATTTTGAGCAATCCGGGTGATGGTAATGTATTGTCCATGTACGCTGACTTGATATGGGAAACTCAAAAGGACTCTCCAAGAGCCGAGAGTTACCATAATCAGGCTGTTAAAGCTGCCCCTGAAGACTGCAGTTATGTTCTAGCATCTTACGCACGCTTCCTTTGGGATGCTGAAGAAGAGGAAGAAGAACAAGAAGAACAAGAAGAAGAGAGTCTTAGAGAAGAACCAGCAACGAGGTTCTTCCAAGGAGTTCACCCTCCGCCGCCTATTGCTGCTGCTTCTTAG

Protein sequence

MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRALSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFVNVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAVKAAPEDCSYVLASYARFLWDAEEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS
Homology
BLAST of CmoCh10G005800 vs. ExPASy TrEMBL
Match: A0A6J1H8P6 (uncharacterized protein LOC111461520 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461520 PE=4 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 8.5e-160
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120
           LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120

Query: 121 NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDCSYVLASYARFLWDAEEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS 299
           KAAPEDCSYVLASYARFLWDAEEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS
Sbjct: 241 KAAPEDCSYVLASYARFLWDAEEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS 298

BLAST of CmoCh10G005800 vs. ExPASy TrEMBL
Match: A0A6J1H8I4 (uncharacterized protein LOC111461520 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461520 PE=4 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 6.1e-158
Identity = 297/298 (99.66%), Postives = 297/298 (99.66%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120
           LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120

Query: 121 NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDCSYVLASYARFLWDAEEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS 299
           KAAPEDC YVLASYARFLWDAEEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS
Sbjct: 241 KAAPEDC-YVLASYARFLWDAEEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS 297

BLAST of CmoCh10G005800 vs. ExPASy TrEMBL
Match: A0A6J1JKH9 (uncharacterized protein LOC111485244 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485244 PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 2.7e-150
Identity = 286/299 (95.65%), Postives = 290/299 (96.99%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           MLLRSASTPLLNSWLHHSRDSSVET IVHHIPKS SIV SGSPSCLSPIIDDSPRRITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETGIVHHIPKSSSIVLSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120
           LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAV F+PSE+TSLSCGSISETGD DGRFV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVRFNPSEITSLSCGSISETGDADGRFV 120

Query: 121 NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           NVLVGGGVG SGG IH GGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGGSGGCIH-GGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDCSYVLASYARFLWDA-EEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS 299
           KAAPEDCSYVLASYARFLWDA EEEEEE+EE+EEESLREEPATRFFQGVHPPPPIAAAS
Sbjct: 241 KAAPEDCSYVLASYARFLWDAEEEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS 298

BLAST of CmoCh10G005800 vs. ExPASy TrEMBL
Match: A0A6J1JJW1 (uncharacterized protein LOC111485244 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485244 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 2.0e-148
Identity = 285/299 (95.32%), Postives = 289/299 (96.66%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           MLLRSASTPLLNSWLHHSRDSSVET IVHHIPKS SIV SGSPSCLSPIIDDSPRRITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETGIVHHIPKSSSIVLSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120
           LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAV F+PSE+TSLSCGSISETGD DGRFV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVRFNPSEITSLSCGSISETGDADGRFV 120

Query: 121 NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           NVLVGGGVG SGG IH GGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGGSGGCIH-GGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDCSYVLASYARFLWDA-EEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS 299
           KAAPEDC YVLASYARFLWDA EEEEEE+EE+EEESLREEPATRFFQGVHPPPPIAAAS
Sbjct: 241 KAAPEDC-YVLASYARFLWDAEEEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS 297

BLAST of CmoCh10G005800 vs. ExPASy TrEMBL
Match: A0A5A7U9I5 (Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001190 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.2e-129
Identity = 255/302 (84.44%), Postives = 274/302 (90.73%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60
           M+LRSASTPLLNSWLHHSRDSS+E EIV+ IPKSRSI+ SGSPSCLSPIIDD PRRITR 
Sbjct: 1   MILRSASTPLLNSWLHHSRDSSLEPEIVYQIPKSRSILLSGSPSCLSPIIDDYPRRITRT 60

Query: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120
           LSETDL+DLS+++ KPFSRTLSGFSE+AEET  VGFS S+  SLSCGSISETG+ DG FV
Sbjct: 61  LSETDLQDLSMAKMKPFSRTLSGFSEMAEETHGVGFSCSKTASLSCGSISETGE-DGGFV 120

Query: 121 NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           +VLVGGGVG SGG IH GGGGSDGGDD SFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 SVLVGGGVGGSGGRIH-GGGGSDGGDDWSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAIL+NP DGNVLSMYADLIWETQKDSPRAESY NQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILNNPEDGNVLSMYADLIWETQKDSPRAESYFNQAV 240

Query: 241 KAAPEDCSYVLASYARFLWDAEEEEEEQEEQE----EESLREEPATRFFQGVHPPPPIAA 299
           KAAPEDC YVLASYARFLWDA+EEEEE+EE+E    EE+ RE+PAT FFQGV  PPP+AA
Sbjct: 241 KAAPEDC-YVLASYARFLWDADEEEEEEEEEEEEVGEENFREKPATSFFQGVQSPPPLAA 299

BLAST of CmoCh10G005800 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 237.3 bits (604), Expect = 1.6e-62
Identity = 166/310 (53.55%), Postives = 201/310 (64.84%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHS--RDSSVET-EIVHHIPKSRSIVFSGSPS--CLSPI----ID 60
           MLLRSASTPLLNS +H S  RDS +ET E VH I + RSI  S S S  C SP+     D
Sbjct: 1   MLLRSASTPLLNSLVHVSSPRDSPIETVESVHQIQRHRSITLSASSSSCCYSPMSVHSSD 60

Query: 61  DSPRRITRALSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISE 120
           DS RR+ R  S++DLR L+ S   P S+ LSG + + +  + +GF     +S     IS 
Sbjct: 61  DSSRRMKRTASDSDLRHLT-STKPPVSKFLSGGALMEDVDEGIGFGLIRTSSYD--GISW 120

Query: 121 TGDGDGRFVNVLVGGGVGASGGSIHGGGGGSDGG-DDGSFGFGDSNHGNESTDLYYQKMI 180
             D D     V  GGG    GG  HGGG G  GG  DG  G      G+++TD++Y+KMI
Sbjct: 121 ALDED---TEVAGGGG----GGMFHGGGKGRSGGRSDGGDG------GDDNTDVHYRKMI 180

Query: 181 EANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSP 240
           EANPGN + LSNYA+FLKEVR D +KA+EYCGRAIL +P DGNVL+MYA+L+W+  KDS 
Sbjct: 181 EANPGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDSS 240

Query: 241 RAESYHNQAVKAAPEDCSYVLASYARFLWDAEEEEEEQEEQEEESLREEPATR--FFQGV 299
           RAE+Y NQAV AAPEDC YV ASYARFLWDAEEEEEE++E+  E   E   +R  FF G 
Sbjct: 241 RAENYFNQAVAAAPEDC-YVQASYARFLWDAEEEEEEEKEERHEEELEHQTSRMNFFTG- 290

BLAST of CmoCh10G005800 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 169.9 bits (429), Expect = 3.2e-42
Identity = 134/317 (42.27%), Postives = 180/317 (56.78%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWL--HHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRIT 60
           MLLRS S P+LNSWL  H SR+SS E E      +S S+    S S    I   +  ++ 
Sbjct: 1   MLLRSTSAPILNSWLPQHCSRESSPEPE-SQLWRRSTSLSLFSSKS----IDGHTGEQLH 60

Query: 61  RALSETDLRDLSVSRTKPFS-RTLSGFSELAEETDAVGFSPSEMTSLSCGSI----SETG 120
           +ALS+     +  S++   S +T +   +     D   ++   +   S   +    S +G
Sbjct: 61  QALSDNKEIIILKSKSNEHSYKTPTSSRQRRSSLDETRYTKKTLDRSSPFLVERLFSSSG 120

Query: 121 DGDGRFVN----VLV---GGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYY 180
            GD    N     LV   GGG+G SGG+I  GGGG  G         D     ++TD YY
Sbjct: 121 QGDKASSNDRLETLVSGGGGGMGGSGGNICNGGGGVGGSG------VDGGRSEDATDTYY 180

Query: 181 QKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQ 240
           ++MI++NPGNS+L  NYA+FLKEV+GD+ KA+EYC RAIL N  DGNVLS+YADLI    
Sbjct: 181 REMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYADLILHNH 240

Query: 241 KDSPRAESYHNQAVKAAPEDCSYVLASYARFLWDAEEEEEEQE-EQEEESLREE----PA 299
           +D  RA SY+ QAVK +PEDC YV ASYARFLWD +E+EE++   +EEE+L +E    P 
Sbjct: 241 QDRQRAHSYYKQAVKMSPEDC-YVQASYARFLWDVDEDEEDEALGEEEENLSDETGHVPP 300

BLAST of CmoCh10G005800 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 7.1e-34
Identity = 84/150 (56.00%), Postives = 105/150 (70.00%), Query Frame = 0

Query: 126 GGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLSNYAR 185
           GG G  GG   GGGGG  GG               S D YY++MI+  PG+++LLSNYAR
Sbjct: 89  GGFGGRGGDGAGGGGGGGGG---------------SVDGYYEEMIQRYPGDTLLLSNYAR 148

Query: 186 FLKEVRGDLVKAQEYCGRAILSNPG-DGNVLSMYADLIWETQKDSPRAESYHNQAVKAAP 245
           FLKEV+GD  KA+EYC RA+LS  G DG +LSMY DLIW+   D  RA+SY++QAV+++P
Sbjct: 149 FLKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSP 208

Query: 246 EDCSYVLASYARFLWDAEEEEEEQEEQEEE 275
           +DC+ VLASYARFLWDAEEE EE+E +  E
Sbjct: 209 DDCN-VLASYARFLWDAEEEVEEEESKHHE 222

BLAST of CmoCh10G005800 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 3.6e-30
Identity = 112/286 (39.16%), Postives = 151/286 (52.80%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVH----HIPKSRSIVFSGSPSCLSPIIDDSPRR 60
           +L+R+ S P+L + L     S   T I          S    F+G    +    +   RR
Sbjct: 4   LLMRTGSMPVLQNRLISGGSSRKMTPISRTNSVESLSSYGERFAGGKISIEVKANVGMRR 63

Query: 61  ITRALSETDL----RDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISE- 120
           +   LSE+D+    R L    +KP    +    E  EE   + F+    + +S G   E 
Sbjct: 64  V---LSESDVIRSERMLKRVGSKPSPARIPEDDEAGEE--EIRFADGWGSMISGGLPVEE 123

Query: 121 ---TGDGDGRFVNVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQK 180
              TG G        VGGG G SGG  +G GGG  GG +     GD          YY++
Sbjct: 124 KCFTGGG--------VGGGSGYSGG--YGNGGG--GGYEDKSKIGD----------YYRE 183

Query: 181 MIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKD 240
           M+ +NP NS+LL NY +FL EV  D   A+EY GRAIL NPGDG  LSMY  LIWET++D
Sbjct: 184 MLRSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWETKRD 243

Query: 241 SPRAESYHNQAVKAAPEDCSYVLASYARFLWDAEEEEEEQEEQEEE 275
             RA+ Y +QAV A+P DC  VL SYARF+W+AE+++++ EE+EEE
Sbjct: 244 EKRAQGYFDQAVNASPNDC-MVLGSYARFMWEAEDDDDDDEEEEEE 261

BLAST of CmoCh10G005800 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 2.7e-17
Identity = 52/127 (40.94%), Postives = 82/127 (64.57%), Query Frame = 0

Query: 151 GFGDSNHGNESTDLYYQKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPG 210
           G+ D N G+     YY+ M+E  P + +LL NYA+FL E +GDL  A+EY  +  +  P 
Sbjct: 115 GYDDKNCGD-----YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPS 174

Query: 211 DGNVLSMYADLIWETQKDSPRAESYHNQAVKAAPEDCSYVLASYARFLWD--AEEEEEEQ 270
           DG  L+ Y  L+ +  +D  +A SY  +AV+A+P+D S VLA+YA FLW+  A++++E+ 
Sbjct: 175 DGVALANYGRLVMKLHQDEAKAMSYFERAVQASPDD-SIVLAAYASFLWEINADDDDEDD 234

Query: 271 EEQEEES 276
           +E ++ES
Sbjct: 235 DEDDDES 234

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1H8P68.5e-160100.00uncharacterized protein LOC111461520 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1H8I46.1e-15899.66uncharacterized protein LOC111461520 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JKH92.7e-15095.65uncharacterized protein LOC111485244 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1JJW12.0e-14895.32uncharacterized protein LOC111485244 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A5A7U9I51.2e-12984.44Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. ... [more]
Match NameE-valueIdentityDescription
AT5G20190.11.6e-6253.55Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G80130.13.2e-4242.27Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G32340.17.1e-3456.00Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G17940.13.6e-3039.16Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G04530.12.7e-1740.94Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 254..279
NoneNo IPR availablePFAMPF13431TPR_17coord: 166..199
e-value: 1.2E-4
score: 22.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..275
NoneNo IPR availablePANTHERPTHR26312TETRATRICOPEPTIDE REPEAT PROTEIN 5coord: 1..290
NoneNo IPR availablePANTHERPTHR26312:SF73TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEINcoord: 1..290
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 155..278
e-value: 4.3E-11
score: 44.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 165..263

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G005800.1CmoCh10G005800.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding