CmoCh10G005800 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCATACTTCCAGAAGAATGCTTCTGAGAAGTGCTTCGACTCCCCTTCTCAATTCATGGTTACACCATTCCAGAGATTCATCTGTAGAGACCGAGATTGTGCACCACATCCCAAAATCGCGTTCCATTGTCTTCTCTGGTTCGCCTAGTTGCTTATCTCCGATAATTGACGATTCTCCCCGGAGGATTACTCGGGCGCTTTCCGAGACGGATCTTCGGGACCTGTCCGTGTCTAGGACGAAACCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGTTGGCCGAAGAGACAGATGCGGTAGGGTTTAGCCCCTCCGAAATGACGTCTTTGAGCTGTGGGTCGATTTCGGAAACGGGAGATGGTGATGGTAGGTTTGTTAATGTTCTTGTTGGAGGTGGAGTTGGTGCTAGTGGTGGAAGTATCCATGGTGGCGGAGGCGGATCCGACGGTGGCGATGATGGGAGTTTTGGGTTTGGAGATTCGAATCATGGGAATGAGAGTACGGATCTGTACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCTCGCTTCTTGAAAGAGGTAAATATATGATCGAAGAACAAATGCTGTTCGATTTCAAACATTCGTACTATTTTTTTTGTATTTATGATTACTTGTTTCGGGTATTAGGTTCGTGGGGATCTTGTAAAAGCTCAAGAGTATTGTGGGAGAGCAATTTTGAGCAATCCGGGTGATGGTAATGTATTGTCCATGTACGCTGACTTGATATGGGAAACTCAAAAGGACTCTCCAAGAGCCGAGAGTTACCATAATCAGGCTGTTAAAGCTGCCCCTGAAGACTGGTAAGCTTTTGGATTTGATGATGAGATTCTTACTGTGGTTGTTTAATGGCATATTCATTGATTGCTTTTATGGTAGCAGTTATGTTCTAGCATCTTACGCACGCTTCCTTTGGGATGCTGAAGAAGAGGAAGAAGAACAAGAAGAACAAGAAGAAGAGAGTCTTAGAGAAGAACCAGCAACGAGGTTCTTCCAAGGAGTTCACCCTCCGCCGCCTATTGCTGCTGCTTCTTAGTTAGTTCTTAGACTTCTTTTGGCTTCATTTCTTTTGTGCTATAGCTTCGAAGATAACAGCTCTGGACCCTGTTTATATTCCCTTCTTGGCCTTAGTATTGATATCATCCATAGATATTGAATTTCCCCCTATGGAGTGAAAGTTGTAGAAAGGAAATAAGATATATGTTAGCTTAATACTTCGCGAGTACTCTATATCTGTTGTTACTGTGCTGCATTTGTTGATCCCGAGGGAAACGAGTGTCAGCGCTCTTGCTGGCATACCACCCTGTGTCCACCCTTTTGGGGTTCAACGTCCTCGCTCACATATCACCTCCTTTTCCTTACAAGCTTCCCTTCAAAGTTTTAAAAATGTGTCTACTGGAGGGAGGTTTCCACACTCTTGTAAAGAATGTTTCGTTCTCTTCTCCAACCAATATGGTCACACCCTTGTAAAGAATGCTTCGTTCTCTTCTCCAACCAATATGGTCACACCCTTGTAAAGAATATTTCGTTTCCCTCTCCAGCTGATGTGACCACACCCTTATAAAGAAAGCTTTGTTCCCTTCTCCAACGGATGTTGCCACACATTTATAACGAATGCTTCGTCCTCTTTTCAAACTAGTGTGGGATTTCCTAGTTACTTTCTTTGTCAGTTTCTTCTTCATGTCTTCCTATTAGGTTTGCTTTTTTCAACAGTCGAACATGGTGGATGGTGGTGGTGGTTCGAATGTTTGACATTTTATCTTGTCTGCTTGCTGTTGAAGATCGTCCAAGTATTCCCTATCCAGACAATTTGGATAAGACAACGATTTATTAGCTTGTAGTACCTCTTTGGCGAACTGCTGTTAACAGGGTACTAAGTAATTTATGGAGTTTGGTTCAACTTCAAAGGGATCCAAAACCAGCCTAGAACAGAGCCAACAACCATGACAGTGGCAGATAACTCTGCCTCAGTACTGATCACGATGACACTTGCCAGTTCGGTTTTCAGCCACCTTGGTTGTAGCTGATCTCTCACAATAGCTTTTTCACCTTCCATTTTCATGTTCAAGTGTTTTTCTGGGTTGTGCTGTTGTTGGGAATTTGAAACTATTCAAAGCTTAGGCTAAGCAGCACTGCCACCGAGGCTGCCAAGATTGGTGACTGTAATTTGTAGACTGTTTGAGCTTTTTGAATGTTTATCACCATTAAAAACACCTTCCCTCAGTCACCACCATGGGAGGGACTCTTTGAAGCTCTTTACTGAAACGACTGGCAGCTCAGTTTGCTTGGATCGCAGATGATTGATGGGATGACCTTGGAACGGATATGACTCATGAAAGTAAGCTTTGTGGGGGCAAGAAAATTGGACTGTATTACTTTTATCGCTTTCGTGACGTATAGTTTCTTTATTGTATTTTCTAGAGGATGATGTTTCGACGGAATCATGTCTCTGTTTGGTAAATCAGAAATGCCTCAGAATGGACTATAAGGAGATACGACTAGTCGTCAATTCTTCCTACTCGGAGTTATATGTTATCTAAGCCGCTG TCCATACTTCCAGAAGAATGCTTCTGAGAAGTGCTTCGACTCCCCTTCTCAATTCATGGTTACACCATTCCAGAGATTCATCTGTAGAGACCGAGATTGTGCACCACATCCCAAAATCGCGTTCCATTGTCTTCTCTGGTTCGCCTAGTTGCTTATCTCCGATAATTGACGATTCTCCCCGGAGGATTACTCGGGCGCTTTCCGAGACGGATCTTCGGGACCTGTCCGTGTCTAGGACGAAACCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGTTGGCCGAAGAGACAGATGCGGTAGGGTTTAGCCCCTCCGAAATGACGTCTTTGAGCTGTGGGTCGATTTCGGAAACGGGAGATGGTGATGGTAGGTTTGTTAATGTTCTTGTTGGAGGTGGAGTTGGTGCTAGTGGTGGAAGTATCCATGGTGGCGGAGGCGGATCCGACGGTGGCGATGATGGGAGTTTTGGGTTTGGAGATTCGAATCATGGGAATGAGAGTACGGATCTGTACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCTCGCTTCTTGAAAGAGGTTCGTGGGGATCTTGTAAAAGCTCAAGAGTATTGTGGGAGAGCAATTTTGAGCAATCCGGGTGATGGTAATGTATTGTCCATGTACGCTGACTTGATATGGGAAACTCAAAAGGACTCTCCAAGAGCCGAGAGTTACCATAATCAGGCTGTTAAAGCTGCCCCTGAAGACTGCAGTTATGTTCTAGCATCTTACGCACGCTTCCTTTGGGATGCTGAAGAAGAGGAAGAAGAACAAGAAGAACAAGAAGAAGAGAGTCTTAGAGAAGAACCAGCAACGAGGTTCTTCCAAGGAGTTCACCCTCCGCCGCCTATTGCTGCTGCTTCTTAGTTAGTTCTTAGACTTCTTTTGGCTTCATTTCTTTTGTGCTATAGCTTCGAAGATAACAGCTCTGGACCCTGTTTATATTCCCTTCTTGGCCTTAGTATTGATATCATCCATAGATATTGAATTTCCCCCTATGGAGTGAAAGTTGTAGAAAGGAAATAAGATATATGTTAGCTTAATACTTCGCGAGTACTCTATATCTGTTGTTACTGTGCTGCATTTGTTGATCCCGAGGGAAACGAGTGTCAGCGCTCTTGCTGGCATACCACCCTGTGTCCACCCTTTTGGGGTTCAACGTCCTCGCTCACATATCACCTCCTTTTCCTTACAAGCTTCCCTTCAAAGTTTTAAAAATGTGTCTACTGGAGGGAGGTTTCCACACTCTTGTAAAGAATGTTTCGTTCTCTTCTCCAACCAATATGGTCACACCCTTGTAAAGAATGCTTCGTTCTCTTCTCCAACCAATATGGTCACACCCTTGTAAAGAATATTTCGTTTCCCTCTCCAGCTGATGTGACCACACCCTTATAAAGAAAGCTTTGTTCCCTTCTCCAACGGATGTTGCCACACATTTATAACGAATGCTTCGTCCTCTTTTCAAACTAGTGTGGGATTTCCTAGTTACTTTCTTTGTCAGTTTCTTCTTCATGTCTTCCTATTAGGTTTGCTTTTTTCAACAGTCGAACATGGTGGATGGTGGTGGTGGTTCGAATGTTTGACATTTTATCTTGTCTGCTTGCTGTTGAAGATCGTCCAAGTATTCCCTATCCAGACAATTTGGATAAGACAACGATTTATTAGCTTGTAGTACCTCTTTGGCGAACTGCTGTTAACAGGGTACTAAGTAATTTATGGAGTTTGGTTCAACTTCAAAGGGATCCAAAACCAGCCTAGAACAGAGCCAACAACCATGACAGTGGCAGATAACTCTGCCTCAGTACTGATCACGATGACACTTGCCAGTTCGGTTTTCAGCCACCTTGGTTGTAGCTGATCTCTCACAATAGCTTTTTCACCTTCCATTTTCATGTTCAAGTGTTTTTCTGGGTTGTGCTGTTGTTGGGAATTTGAAACTATTCAAAGCTTAGGCTAAGCAGCACTGCCACCGAGGCTGCCAAGATTGGTGACTGTAATTTGTAGACTGTTTGAGCTTTTTGAATGTTTATCACCATTAAAAACACCTTCCCTCAGTCACCACCATGGGAGGGACTCTTTGAAGCTCTTTACTGAAACGACTGGCAGCTCAGTTTGCTTGGATCGCAGATGATTGATGGGATGACCTTGGAACGGATATGACTCATGAAAGTAAGCTTTGTGGGGGCAAGAAAATTGGACTGTATTACTTTTATCGCTTTCGTGACGTATAGTTTCTTTATTGTATTTTCTAGAGGATGATGTTTCGACGGAATCATGTCTCTGTTTGGTAAATCAGAAATGCCTCAGAATGGACTATAAGGAGATACGACTAGTCGTCAATTCTTCCTACTCGGAGTTATATGTTATCTAAGCCGCTG ATGCTTCTGAGAAGTGCTTCGACTCCCCTTCTCAATTCATGGTTACACCATTCCAGAGATTCATCTGTAGAGACCGAGATTGTGCACCACATCCCAAAATCGCGTTCCATTGTCTTCTCTGGTTCGCCTAGTTGCTTATCTCCGATAATTGACGATTCTCCCCGGAGGATTACTCGGGCGCTTTCCGAGACGGATCTTCGGGACCTGTCCGTGTCTAGGACGAAACCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGTTGGCCGAAGAGACAGATGCGGTAGGGTTTAGCCCCTCCGAAATGACGTCTTTGAGCTGTGGGTCGATTTCGGAAACGGGAGATGGTGATGGTAGGTTTGTTAATGTTCTTGTTGGAGGTGGAGTTGGTGCTAGTGGTGGAAGTATCCATGGTGGCGGAGGCGGATCCGACGGTGGCGATGATGGGAGTTTTGGGTTTGGAGATTCGAATCATGGGAATGAGAGTACGGATCTGTACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCTCGCTTCTTGAAAGAGGTTCGTGGGGATCTTGTAAAAGCTCAAGAGTATTGTGGGAGAGCAATTTTGAGCAATCCGGGTGATGGTAATGTATTGTCCATGTACGCTGACTTGATATGGGAAACTCAAAAGGACTCTCCAAGAGCCGAGAGTTACCATAATCAGGCTGTTAAAGCTGCCCCTGAAGACTGCAGTTATGTTCTAGCATCTTACGCACGCTTCCTTTGGGATGCTGAAGAAGAGGAAGAAGAACAAGAAGAACAAGAAGAAGAGAGTCTTAGAGAAGAACCAGCAACGAGGTTCTTCCAAGGAGTTCACCCTCCGCCGCCTATTGCTGCTGCTTCTTAG MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRALSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFVNVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAVKAAPEDCSYVLASYARFLWDAEEEEEEQEEQEEESLREEPATRFFQGVHPPPPIAAAS Homology
BLAST of CmoCh10G005800 vs. ExPASy TrEMBL
Match: A0A6J1H8P6 (uncharacterized protein LOC111461520 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461520 PE=4 SV=1) HSP 1 Score: 572.8 bits (1475), Expect = 8.5e-160 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
BLAST of CmoCh10G005800 vs. ExPASy TrEMBL
Match: A0A6J1H8I4 (uncharacterized protein LOC111461520 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461520 PE=4 SV=1) HSP 1 Score: 566.6 bits (1459), Expect = 6.1e-158 Identity = 297/298 (99.66%), Postives = 297/298 (99.66%), Query Frame = 0
BLAST of CmoCh10G005800 vs. ExPASy TrEMBL
Match: A0A6J1JKH9 (uncharacterized protein LOC111485244 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485244 PE=4 SV=1) HSP 1 Score: 541.2 bits (1393), Expect = 2.7e-150 Identity = 286/299 (95.65%), Postives = 290/299 (96.99%), Query Frame = 0
BLAST of CmoCh10G005800 vs. ExPASy TrEMBL
Match: A0A6J1JJW1 (uncharacterized protein LOC111485244 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485244 PE=4 SV=1) HSP 1 Score: 535.0 bits (1377), Expect = 2.0e-148 Identity = 285/299 (95.32%), Postives = 289/299 (96.66%), Query Frame = 0
BLAST of CmoCh10G005800 vs. ExPASy TrEMBL
Match: A0A5A7U9I5 (Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001190 PE=4 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 1.2e-129 Identity = 255/302 (84.44%), Postives = 274/302 (90.73%), Query Frame = 0
BLAST of CmoCh10G005800 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 237.3 bits (604), Expect = 1.6e-62 Identity = 166/310 (53.55%), Postives = 201/310 (64.84%), Query Frame = 0
BLAST of CmoCh10G005800 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 169.9 bits (429), Expect = 3.2e-42 Identity = 134/317 (42.27%), Postives = 180/317 (56.78%), Query Frame = 0
BLAST of CmoCh10G005800 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 142.1 bits (357), Expect = 7.1e-34 Identity = 84/150 (56.00%), Postives = 105/150 (70.00%), Query Frame = 0
BLAST of CmoCh10G005800 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 129.8 bits (325), Expect = 3.6e-30 Identity = 112/286 (39.16%), Postives = 151/286 (52.80%), Query Frame = 0
BLAST of CmoCh10G005800 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 87.0 bits (214), Expect = 2.7e-17 Identity = 52/127 (40.94%), Postives = 82/127 (64.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|