CmoCh10G003640 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh10G003640
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionzinc finger CCHC domain-containing protein 7-like isoform X1
LocationCmo_Chr10: 1651572 .. 1654092 (+)
RNA-Seq ExpressionCmoCh10G003640
SyntenyCmoCh10G003640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGGAGAGGCAAGCAGAGGAAGTTCGAATTCGAGGACGACGAAGACGAACTTCAGGGTGTGAAACCCGGGGATTCGAATTCTGCCAAGTCGGTGAGCAGTGATGATGAGGCCAATGAAGATCTTAGCCTCAATGTTGTCGAGAAGGCTTTGCGATTGCGCGCTGGAATGTTGGTTATCGATGCAGGCAATAATAAGGATGGTAACTGTGAACAAGATGGTAATGGCGCTATTGTTGCCATTGGTGCTATTGAATTGTTTGCATCGTCGTTGGAGGATGCTGATGCCGAAGCCGGAACTAGCGGAGCCAGCGGCGATGGCATCACCGCTGCTTCTGAGGGGCGCGAACTGGAGAGTGAGAAGACAGTGAAGCAGAGGAAGACGAACGTTAAGAATCTGGGAACTGAAGAGAGCAATGTGAGTATTTTACTACTTTCGCTTTCATTTCTTGTTGATAGAAAGCAAAAATATAACTCTATTTTCAAAGTATAAACCATTTTATAATTCGAGCAAGATATTATAACCTTTCCTGTATCTGATGAAAAGATCATGGGGTATGTCTACTAGAGCTTTGTATTTCTCATTGTCTTGTTGTTTCCTTTCATTTTAGATGGTTGTCACAGAAGGAGAGAAGTTCGGAACGACTGGAATGATAGATCAAGGGGTTTCGGTGGAATCAAACTCTCCTGAGACAACTGATAATAACGTGTTCAGGAAGCTTCTCGTGAGTCCCTTTAACTGGTCTGAACTACCATTATGGAAAAATTAGTGTTTGTGGATGCATAGTGTTGTATCTCTCATATATTGTTCTACCAGCGTGGACCAAGATATTTTGATCCTCCAGACAGTTGGGGAACGTGCTATACTTGTGGCGAGGAAGGTCATAATGCAGTGAATTGCTCATCAGCTAAACGAAAGAGATCGTGTTTTGTCTGTGGAAGTGTGGAGCACAATGCAAGGAGTTGCTCGAAGGTTGGGAAGAAATATTTTTAATATCTTCGTCGTCTCTGAGTTTGCAATTCCTAATTCTAATCTAGAGACTATGTTGATTGGCTTTCCTATGTGAGTGGTTATTGACCCAATCTATTCCAATCGGCCTGAGTGTCGCACGATGATGGAGTGTTGCCTTTTAAAATGTTCTCTTGTTTCTTGCTCATTTGGATATATTGAAAATTGAAAGCCTACTCCTTACTATTCTCAGGCACGGGACTGCTATATTTGCAAGAAAGGTGGGCATCATGCAAAAGACTGTCCAGAGAAGCACATGGATGTTTCTTCAATCTTAAAATTATGTTTAAAATGTAGAGATTCTGGTCATGATATGTTTTCTTGTCAGAATCTTTATCCAGATGACGATCTTAAGGTCTTCTTCTCCTTCGTATTGTAGTGTACTTTCTTGGTTCTTTCCAGAAGTTATTTTGCACGCCGTATCATTTTTCTCGACTTGACTTGTAAAACATTTTTTTTTTCAGAATATACAATGCTACATTTGCAAGAAATTTGGTCATTTATGTTGCGTGGATTCCACCAGCGACACTACCATAGTTTCCTGCTATAAATGTGGGCAGACTGGACATACGGGTCTGGTAAGTCGTCTATGCAACCGACTGTATACAATGTTCACATGATACTCATATCACCTTTCATTTGAGACGTTCTCTTGTTTTGTTTTTGCCTTACTTTTATATGCAACTGTCTACTTGATTCGCTTTCACACCAGTTGGCAGTATCCATCCAAAAATCTGAGTTTTGCTGATTCTTGAGCATTGAAAAGTTTTAGATTCCTGGACTTATTTAACGACGGCGTATATTCTTATGCTGATCGAATAGTTGGGTTTGATGAGAGGCTAACATTTGTTTGTAATCATATTGTTCAATATTTAGTGAGTCAACTCGTGAGGAAGTAGGTGAGGATTAATAATGACGGGGTCTAAAATGTTGCTTTCACTTAGCACTGCTAGACGCCTCATTACTCATTAGGATACTTGAACCTTGTGGACAAGAGAGCTCGTTCCTTTAAGATTGAACTTCCTTGCTTCTAAGTTTATTGCACGTGGATGGTTAATTTTTTTTTGTCCTGTGTATCTGAATCTACAGTCATGCTCAAGATTACGCGGTGCTGTATCGCCCAGCACATGCTATAGATGTCGTGAAGAAGGGCATTTTGCCCGTGAGTGCACGAGTGCCACCAAGGTAGATAAAAGAGCTTGCAACTGGTTTGATTTATTAGCGAAAAATTAGGTGGAGAAGGTGTTCATTTTGTTATGTATTTACTTATATTTCCTGTCAAAATGTGATTCTAATCTTACACTTCATGGAGCTTGCTCAGGTCGGCAAGAGGAGTCGTCGGTTATCAAATCCGAAATCAATGTCGCAAATAGAAGAAACTAACCATATGGGGTCAAAATCTGCACCTCATGATCTTGCAAAGGCTCATAATAATGAGAAAAAGATAAGCCATGAAGATAAAACACTGACTAGCCTAGAAAGTCAGGAAGGGTCGCTGGGTATCAAATGA

mRNA sequence

ATGGGGAGGAGAGGCAAGCAGAGGAAGTTCGAATTCGAGGACGACGAAGACGAACTTCAGGGTGTGAAACCCGGGGATTCGAATTCTGCCAAGTCGGTGAGCAGTGATGATGAGGCCAATGAAGATCTTAGCCTCAATGTTGTCGAGAAGGCTTTGCGATTGCGCGCTGGAATGTTGGTTATCGATGCAGGCAATAATAAGGATGGTAACTGTGAACAAGATGGTAATGGCGCTATTGTTGCCATTGGTGCTATTGAATTGTTTGCATCGTCGTTGGAGGATGCTGATGCCGAAGCCGGAACTAGCGGAGCCAGCGGCGATGGCATCACCGCTGCTTCTGAGGGGCGCGAACTGGAGAGTGAGAAGACAGTGAAGCAGAGGAAGACGAACGTTAAGAATCTGGGAACTGAAGAGAGCAATATGGTTGTCACAGAAGGAGAGAAGTTCGGAACGACTGGAATGATAGATCAAGGGGTTTCGGTGGAATCAAACTCTCCTGAGACAACTGATAATAACGTGTTCAGGAAGCTTCTCCGTGGACCAAGATATTTTGATCCTCCAGACAGTTGGGGAACGTGCTATACTTGTGGCGAGGAAGGTCATAATGCAGTGAATTGCTCATCAGCTAAACGAAAGAGATCGTGTTTTGTCTGTGGAAGTGTGGAGCACAATGCAAGGAGTTGCTCGAAGGCACGGGACTGCTATATTTGCAAGAAAGGTGGGCATCATGCAAAAGACTGTCCAGAGAAGCACATGGATGTTTCTTCAATCTTAAAATTATGTTTAAAATGTAGAGATTCTGGTCATGATATGTTTTCTTGTCAGAATCTTTATCCAGATGACGATCTTAAGAATATACAATGCTACATTTGCAAGAAATTTGGTCATTTATGTTGCGTGGATTCCACCAGCGACACTACCATAGTTTCCTGCTATAAATGTGGGCAGACTGGACATACGGGTCTGTCATGCTCAAGATTACGCGGTGCTGTATCGCCCAGCACATGCTATAGATGTCGTGAAGAAGGGCATTTTGCCCGTGAGTGCACGAGTGCCACCAAGGTCGGCAAGAGGAGTCGTCGGTTATCAAATCCGAAATCAATGTCGCAAATAGAAGAAACTAACCATATGGGGTCAAAATCTGCACCTCATGATCTTGCAAAGGCTCATAATAATGAGAAAAAGATAAGCCATGAAGATAAAACACTGACTAGCCTAGAAAGTCAGGAAGGGTCGCTGGGTATCAAATGA

Coding sequence (CDS)

ATGGGGAGGAGAGGCAAGCAGAGGAAGTTCGAATTCGAGGACGACGAAGACGAACTTCAGGGTGTGAAACCCGGGGATTCGAATTCTGCCAAGTCGGTGAGCAGTGATGATGAGGCCAATGAAGATCTTAGCCTCAATGTTGTCGAGAAGGCTTTGCGATTGCGCGCTGGAATGTTGGTTATCGATGCAGGCAATAATAAGGATGGTAACTGTGAACAAGATGGTAATGGCGCTATTGTTGCCATTGGTGCTATTGAATTGTTTGCATCGTCGTTGGAGGATGCTGATGCCGAAGCCGGAACTAGCGGAGCCAGCGGCGATGGCATCACCGCTGCTTCTGAGGGGCGCGAACTGGAGAGTGAGAAGACAGTGAAGCAGAGGAAGACGAACGTTAAGAATCTGGGAACTGAAGAGAGCAATATGGTTGTCACAGAAGGAGAGAAGTTCGGAACGACTGGAATGATAGATCAAGGGGTTTCGGTGGAATCAAACTCTCCTGAGACAACTGATAATAACGTGTTCAGGAAGCTTCTCCGTGGACCAAGATATTTTGATCCTCCAGACAGTTGGGGAACGTGCTATACTTGTGGCGAGGAAGGTCATAATGCAGTGAATTGCTCATCAGCTAAACGAAAGAGATCGTGTTTTGTCTGTGGAAGTGTGGAGCACAATGCAAGGAGTTGCTCGAAGGCACGGGACTGCTATATTTGCAAGAAAGGTGGGCATCATGCAAAAGACTGTCCAGAGAAGCACATGGATGTTTCTTCAATCTTAAAATTATGTTTAAAATGTAGAGATTCTGGTCATGATATGTTTTCTTGTCAGAATCTTTATCCAGATGACGATCTTAAGAATATACAATGCTACATTTGCAAGAAATTTGGTCATTTATGTTGCGTGGATTCCACCAGCGACACTACCATAGTTTCCTGCTATAAATGTGGGCAGACTGGACATACGGGTCTGTCATGCTCAAGATTACGCGGTGCTGTATCGCCCAGCACATGCTATAGATGTCGTGAAGAAGGGCATTTTGCCCGTGAGTGCACGAGTGCCACCAAGGTCGGCAAGAGGAGTCGTCGGTTATCAAATCCGAAATCAATGTCGCAAATAGAAGAAACTAACCATATGGGGTCAAAATCTGCACCTCATGATCTTGCAAAGGCTCATAATAATGAGAAAAAGATAAGCCATGAAGATAAAACACTGACTAGCCTAGAAAGTCAGGAAGGGTCGCTGGGTATCAAATGA

Protein sequence

MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLVIDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELESEKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLRGPRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKGGHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCVDSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSRRLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKISHEDKTLTSLESQEGSLGIK
Homology
[Close]
BLAST of CmoCh10G003640 vs. ExPASy Swiss-Prot
Match: Q3T0Q6 (Cellular nucleic acid-binding protein OS=Bos taurus OX=9913 GN=CNBP PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.8e-22
Identity = 64/178 (35.96%), Postives = 79/178 (44.38%), Query Frame = 0 

Query: 193 CYTCGEEGHNAVNCSS------AKRKRS-------------CFVCGSVEHNARSCSKARD 252
           C+ CG  GH A  C +        R R              C+ CG   H A+ C    D
Sbjct: 6   CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65

Query: 253 -CYICKKGGHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICK 312
            CY C +GGH AKDC E   +     + C  C   GH    C      D     +CY C 
Sbjct: 66  ACYNCGRGGHIAKDCKEPKRERE---QCCYNCGKPGHLARDC------DHADEQKCYSCG 125

Query: 313 KFGHLCCVDSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECT 351
           +FGH+       D T V CY+CG+TGH  ++CS+     S   CYRC E GH ARECT
Sbjct: 126 EFGHI-----QKDCTKVKCYRCGETGHVAINCSK----TSEVNCYRCGESGHLARECT 165

[Close]
BLAST of CmoCh10G003640 vs. ExPASy Swiss-Prot
Match: O42395 (Cellular nucleic acid-binding protein OS=Gallus gallus OX=9031 GN=CNBP PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.5e-22
Identity = 64/180 (35.56%), Postives = 80/180 (44.44%), Query Frame = 0 

Query: 193 CYTCGEEGHNAVNCSSA--------KRKRS------------CFVCGSVEHNARSCSKAR 252
           C+ CG  GH A  C +          R R+            C+ CG   H A+ C    
Sbjct: 6   CFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQE 65

Query: 253 D--CYICKKGGHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYI 312
           D  CY C +GGH AKDC E   +     + C  C   GH    C      D     +CY 
Sbjct: 66  DKACYNCGRGGHIAKDCKEPKRERE---QCCYNCGKPGHLARDC------DHADEQKCYS 125

Query: 313 CKKFGHLCCVDSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECT 351
           C +FGH+       D T V CY+CG+TGH  ++CS+     S   CYRC E GH ARECT
Sbjct: 126 CGEFGHI-----QKDCTKVKCYRCGETGHVAINCSK----TSEVNCYRCGESGHLARECT 167

[Close]
BLAST of CmoCh10G003640 vs. ExPASy Swiss-Prot
Match: P62633 (Cellular nucleic acid-binding protein OS=Homo sapiens OX=9606 GN=CNBP PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.5e-21
Identity = 64/185 (34.59%), Postives = 79/185 (42.70%), Query Frame = 0 

Query: 193 CYTCGEEGHNAVNCSS------AKRKRS--------------------CFVCGSVEHNAR 252
           C+ CG  GH A  C +        R R                     C+ CG   H A+
Sbjct: 6   CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65

Query: 253 SCSKARD-CYICKKGGHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKN 312
            C    D CY C +GGH AKDC E   +     + C  C   GH    C      D    
Sbjct: 66  DCDLQEDACYNCGRGGHIAKDCKEPKRERE---QCCYNCGKPGHLARDC------DHADE 125

Query: 313 IQCYICKKFGHLCCVDSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHF 351
            +CY C +FGH+       D T V CY+CG+TGH  ++CS+     S   CYRC E GH 
Sbjct: 126 QKCYSCGEFGHI-----QKDCTKVKCYRCGETGHVAINCSK----TSEVNCYRCGESGHL 172

[Close]
BLAST of CmoCh10G003640 vs. ExPASy Swiss-Prot
Match: Q5R5R5 (Cellular nucleic acid-binding protein OS=Pongo abelii OX=9601 GN=CNBP PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.5e-21
Identity = 64/185 (34.59%), Postives = 79/185 (42.70%), Query Frame = 0 

Query: 193 CYTCGEEGHNAVNCSS------AKRKRS--------------------CFVCGSVEHNAR 252
           C+ CG  GH A  C +        R R                     C+ CG   H A+
Sbjct: 6   CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65

Query: 253 SCSKARD-CYICKKGGHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKN 312
            C    D CY C +GGH AKDC E   +     + C  C   GH    C      D    
Sbjct: 66  DCDLQEDACYNCGRGGHIAKDCKEPKRERE---QCCYNCGKPGHLARDC------DHADE 125

Query: 313 IQCYICKKFGHLCCVDSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHF 351
            +CY C +FGH+       D T V CY+CG+TGH  ++CS+     S   CYRC E GH 
Sbjct: 126 QKCYSCGEFGHI-----QKDCTKVKCYRCGETGHVAINCSK----TSEVNCYRCGESGHL 172

[Close]
BLAST of CmoCh10G003640 vs. ExPASy Swiss-Prot
Match: P62634 (Cellular nucleic acid-binding protein OS=Rattus norvegicus OX=10116 GN=Cnbp PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.5e-21
Identity = 64/185 (34.59%), Postives = 79/185 (42.70%), Query Frame = 0 

Query: 193 CYTCGEEGHNAVNCSS------AKRKRS--------------------CFVCGSVEHNAR 252
           C+ CG  GH A  C +        R R                     C+ CG   H A+
Sbjct: 6   CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65

Query: 253 SCSKARD-CYICKKGGHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKN 312
            C    D CY C +GGH AKDC E   +     + C  C   GH    C      D    
Sbjct: 66  DCDLQEDACYNCGRGGHIAKDCKEPKRERE---QCCYNCGKPGHLARDC------DHADE 125

Query: 313 IQCYICKKFGHLCCVDSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHF 351
            +CY C +FGH+       D T V CY+CG+TGH  ++CS+     S   CYRC E GH 
Sbjct: 126 QKCYSCGEFGHI-----QKDCTKVKCYRCGETGHVAINCSK----TSEVNCYRCGESGHL 172

[Close]
BLAST of CmoCh10G003640 vs. ExPASy TrEMBL
Match: A0A6J1E5C6 (LOW QUALITY PROTEIN: zinc finger CCHC domain-containing protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111430085 PE=4 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 3.8e-235
Identity = 410/411 (99.76%), Postives = 411/411 (100.00%), Query Frame = 0 

Query: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLV 60
           MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLV
Sbjct: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLV 60

Query: 61  IDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES 120
           IDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES
Sbjct: 61  IDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES 120

Query: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLRG 180
           EKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLRG
Sbjct: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLRG 180

Query: 181 PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG 240
           PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG
Sbjct: 181 PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG 240

Query: 241 GHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCV 300
           GHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCV
Sbjct: 241 GHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCV 300

Query: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR 360
           DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR
Sbjct: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR 360

Query: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKISHEDKTLTSLESQEG 412
           RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKISHEDKTLTSLESQ+G
Sbjct: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKISHEDKTLTSLESQKG 411

[Close]
BLAST of CmoCh10G003640 vs. ExPASy TrEMBL
Match: A0A6J1JJQ3 (zinc finger CCHC domain-containing protein 7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485720 PE=4 SV=1)

HSP 1 Score: 801.2 bits (2068), Expect = 2.0e-228
Identity = 401/417 (96.16%), Postives = 408/417 (97.84%), Query Frame = 0 

Query: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLV 60
           MGRRGKQRKFEFEDDEDELQGVKPGD NSA SVSSDDEANEDLSLNVVEKAL+LRAGMLV
Sbjct: 1   MGRRGKQRKFEFEDDEDELQGVKPGDLNSANSVSSDDEANEDLSLNVVEKALQLRAGMLV 60

Query: 61  IDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES 120
           IDAGNNKDGNCEQDGNG IVAIGAIELF+SSLEDADAEAGTSGASGDGITAASEGRELES
Sbjct: 61  IDAGNNKDGNCEQDGNGDIVAIGAIELFSSSLEDADAEAGTSGASGDGITAASEGRELES 120

Query: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLRG 180
           EKTVKQRKTNVKNLGTEESNMVVTEGEKF TTGMIDQGVSVESNS ETTDNNVFRKLLRG
Sbjct: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFETTGMIDQGVSVESNSTETTDNNVFRKLLRG 180

Query: 181 PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG 240
           PRYFDPP+SWGTCYTCGEEGHNAVNCSSAKRKRSCFVC SVEHNARSCSKARDCYICKKG
Sbjct: 181 PRYFDPPESWGTCYTCGEEGHNAVNCSSAKRKRSCFVCRSVEHNARSCSKARDCYICKKG 240

Query: 241 GHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCV 300
           GHHAKDCPEKHMDVSS LKLCLKCR+SGHDMFSCQNLYPDDDLKNIQCY+CKKFGHLCCV
Sbjct: 241 GHHAKDCPEKHMDVSSSLKLCLKCRNSGHDMFSCQNLYPDDDLKNIQCYVCKKFGHLCCV 300

Query: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR 360
           DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTS TKVGKRSR
Sbjct: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSTTKVGKRSR 360

Query: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKISHEDKTLTSLESQE-GSLGIK 417
           RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKI+HEDKTLTSLESQ+ GSLGIK
Sbjct: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKINHEDKTLTSLESQDKGSLGIK 417

[Close]
BLAST of CmoCh10G003640 vs. ExPASy TrEMBL
Match: A0A6J1JHC2 (zinc finger CCHC domain-containing protein 7-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485720 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 5.6e-186
Identity = 349/417 (83.69%), Postives = 355/417 (85.13%), Query Frame = 0 

Query: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLV 60
           MGRRGKQRKFEFEDDEDELQGVKPGD NSA SVSSDDEANEDLSLNVVEKAL+LRAGMLV
Sbjct: 1   MGRRGKQRKFEFEDDEDELQGVKPGDLNSANSVSSDDEANEDLSLNVVEKALQLRAGMLV 60

Query: 61  IDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES 120
           IDAGNNKDGNCEQDGNG IVAIGAIELF+SSLEDADAEAGTSGASGDGITAASEGRELES
Sbjct: 61  IDAGNNKDGNCEQDGNGDIVAIGAIELFSSSLEDADAEAGTSGASGDGITAASEGRELES 120

Query: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLRG 180
           EKTVKQRKTNVKNLGTEESNMVVTEGEKF TTGMIDQGVSVESNS ETTDNNVFRKLLRG
Sbjct: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFETTGMIDQGVSVESNSTETTDNNVFRKLLRG 180

Query: 181 PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG 240
           PRYFDPP+SWGTCYTCGEEGHNAVNCSSAKRKRSCFVC SVEHNARSCS           
Sbjct: 181 PRYFDPPESWGTCYTCGEEGHNAVNCSSAKRKRSCFVCRSVEHNARSCS----------- 240

Query: 241 GHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCV 300
                                                      KNIQCY+CKKFGHLCCV
Sbjct: 241 -------------------------------------------KNIQCYVCKKFGHLCCV 300

Query: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR 360
           DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTS TKVGKRSR
Sbjct: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSTTKVGKRSR 360

Query: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKISHEDKTLTSLESQE-GSLGIK 417
           RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKI+HEDKTLTSLESQ+ GSLGIK
Sbjct: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKINHEDKTLTSLESQDKGSLGIK 363

[Close]
BLAST of CmoCh10G003640 vs. ExPASy TrEMBL
Match: A0A1S3BVV3 (zinc finger CCHC domain-containing protein 7 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103494199 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 1.2e-156
Identity = 302/491 (61.51%), Postives = 342/491 (69.65%), Query Frame = 0 

Query: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSS-DDEANEDLSLNVVEKALRLRAGML 60
           MGRR KQ+KF+FEDD+DELQ +K      AKS+SS DDEANEDLSL +VEKA++LR+G L
Sbjct: 1   MGRRIKQKKFKFEDDDDELQVLKTVAPKFAKSLSSDDDEANEDLSLKIVEKAMQLRSGKL 60

Query: 61  VIDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELE 120
           V DAG NKDG CEQ GNG + A+GAIEL  SSLE ADA+AGTS AS D I  A       
Sbjct: 61  VTDAGVNKDGKCEQSGNGDVAAVGAIELVPSSLEGADADAGTSKASADSIATA------- 120

Query: 121 SEKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLR 180
           S+KTVK+RK  VK LGTEE + VVTEGEK  TTG+IDQ  SVE NS  TTDNNVFRKLLR
Sbjct: 121 SKKTVKKRKKKVKKLGTEERDAVVTEGEKIETTGVIDQVDSVEPNSTATTDNNVFRKLLR 180

Query: 181 GPRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKK 240
           GPRYFDPPDSWGTCY CGEEGHNAVNC+SAKRKR CFVCGS+EHNA+SCSKARDC+ICKK
Sbjct: 181 GPRYFDPPDSWGTCYNCGEEGHNAVNCTSAKRKRPCFVCGSLEHNAKSCSKARDCFICKK 240

Query: 241 GGHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCC 300
           GGH A  CPEKH +VSS LK+CLKC DSGHDMFSCQN Y DDDLK IQCYICKKFGHLCC
Sbjct: 241 GGHRANVCPEKHKNVSSSLKICLKCGDSGHDMFSCQNHYADDDLKKIQCYICKKFGHLCC 300

Query: 301 VDSTSDTTIVSCYKCGQTGHTGLSCSRLR------------------------------- 360
           V+STSDT++VSCYKCGQTGHTGLSCSRLR                               
Sbjct: 301 VNSTSDTSVVSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGEEGHFARECTSSTKS 360

Query: 361 ---------------------------------------------GAVSPSTCYRCREEG 415
                                                        GA SPS+CYRC E+G
Sbjct: 361 GKRNREEASGAASPSPCYKCGEEGHFARECTSSTKGGKRILEETSGAASPSSCYRCGEQG 420

[Close]
BLAST of CmoCh10G003640 vs. ExPASy TrEMBL
Match: A0A1S3BXL1 (zinc finger CCHC domain-containing protein 7 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494199 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 3.6e-156
Identity = 305/494 (61.74%), Postives = 343/494 (69.43%), Query Frame = 0 

Query: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSS-DDEANEDLSLNVVEKALRLRAGML 60
           MGRR KQ+KF+FEDD+DELQ +K      AKS+SS DDEANEDLSL +VEKA++LR+G L
Sbjct: 1   MGRRIKQKKFKFEDDDDELQVLKTVAPKFAKSLSSDDDEANEDLSLKIVEKAMQLRSGKL 60

Query: 61  VIDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELE 120
           V DAG NKDG CEQ GNG + A+GAIEL  SSLE ADA+AGTS AS D I  A       
Sbjct: 61  VTDAGVNKDGKCEQSGNGDVAAVGAIELVPSSLEGADADAGTSKASADSIATA------- 120

Query: 121 SEKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLR 180
           S+KTVK+RK  VK LGTEE + VVTEGEK  TTG+IDQ  SVE NS  TTDNNVFRKLLR
Sbjct: 121 SKKTVKKRKKKVKKLGTEERDAVVTEGEKIETTGVIDQVDSVEPNSTATTDNNVFRKLLR 180

Query: 181 GPRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKK 240
           GPRYFDPPDSWGTCY CGEEGHNAVNC+SAKRKR CFVCGS+EHNA+SCSKARDC+ICKK
Sbjct: 181 GPRYFDPPDSWGTCYNCGEEGHNAVNCTSAKRKRPCFVCGSLEHNAKSCSKARDCFICKK 240

Query: 241 GGHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCC 300
           GGH A  CPEKH +VSS LK+CLKC DSGHDMFSCQN Y DDDLK IQCYICKKFGHLCC
Sbjct: 241 GGHRANVCPEKHKNVSSSLKICLKCGDSGHDMFSCQNHYADDDLKKIQCYICKKFGHLCC 300

Query: 301 VDSTSDTTIVSCYKCGQTGHTGLSCSRLR------------------------------- 360
           V+STSDT++VSCYKCGQTGHTGLSCSRLR                               
Sbjct: 301 VNSTSDTSVVSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGEEGHFARECTSSTKS 360

Query: 361 ---------GAVSPSTCYRCREEGHFARECTSATK------------------------- 415
                    GA SPS CY+C EEGHFARECTS+TK                         
Sbjct: 361 GKRNREEASGAASPSPCYKCGEEGHFARECTSSTKGGKRILEETSGAASPSSCYRCGEQG 420

[Close]
BLAST of CmoCh10G003640 vs. NCBI nr
Match: XP_022921998.1 (LOW QUALITY PROTEIN: zinc finger CCHC domain-containing protein 7-like [Cucurbita moschata])

HSP 1 Score: 823.5 bits (2126), Expect = 7.9e-235
Identity = 410/411 (99.76%), Postives = 411/411 (100.00%), Query Frame = 0 

Query: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLV 60
           MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLV
Sbjct: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLV 60

Query: 61  IDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES 120
           IDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES
Sbjct: 61  IDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES 120

Query: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLRG 180
           EKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLRG
Sbjct: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLRG 180

Query: 181 PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG 240
           PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG
Sbjct: 181 PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG 240

Query: 241 GHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCV 300
           GHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCV
Sbjct: 241 GHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCV 300

Query: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR 360
           DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR
Sbjct: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR 360

Query: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKISHEDKTLTSLESQEG 412
           RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKISHEDKTLTSLESQ+G
Sbjct: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKISHEDKTLTSLESQKG 411

[Close]
BLAST of CmoCh10G003640 vs. NCBI nr
Match: KAG6589643.1 (Cellular nucleic acid-binding protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 812.4 bits (2097), Expect = 1.8e-231
Identity = 407/417 (97.60%), Postives = 410/417 (98.32%), Query Frame = 0 

Query: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLV 60
           MGRRGKQRKFEFEDDEDELQGVKPGDSNSA SVSSDDEANEDLSLNVVEKALRLRAGMLV
Sbjct: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSANSVSSDDEANEDLSLNVVEKALRLRAGMLV 60

Query: 61  IDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES 120
           IDAGNNKDGNCEQDGNG IVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES
Sbjct: 61  IDAGNNKDGNCEQDGNGDIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES 120

Query: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLRG 180
           EKTVKQRKTNVKNLGTEESNMVVTEGEKF TTGMIDQGVSVESN  ETTDNNVFRKLLRG
Sbjct: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFETTGMIDQGVSVESNCTETTDNNVFRKLLRG 180

Query: 181 PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG 240
           PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG
Sbjct: 181 PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG 240

Query: 241 GHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCV 300
           GHHAKDCPEKHMDVSS LKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCY+CKKFGHLCCV
Sbjct: 241 GHHAKDCPEKHMDVSSSLKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYVCKKFGHLCCV 300

Query: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR 360
           DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR
Sbjct: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR 360

Query: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKISHEDKTLTSLESQE-GSLGIK 417
           RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKI+HEDKTLTSLESQ+ GSLGIK
Sbjct: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKINHEDKTLTSLESQDKGSLGIK 417

[Close]
BLAST of CmoCh10G003640 vs. NCBI nr
Match: XP_023516900.1 (zinc finger CCHC domain-containing protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 803.9 bits (2075), Expect = 6.5e-229
Identity = 401/417 (96.16%), Postives = 409/417 (98.08%), Query Frame = 0 

Query: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLV 60
           MGRRGKQRKFEFEDDEDELQGVKPGDSNSA SVSSDDEANEDLSLNVVEKALRLRAGMLV
Sbjct: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSANSVSSDDEANEDLSLNVVEKALRLRAGMLV 60

Query: 61  IDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES 120
           IDAGNNKDGNCEQDGNG IVAIGAIELF+SSLEDADAEAGTSGASGDGITAASEGRELES
Sbjct: 61  IDAGNNKDGNCEQDGNGDIVAIGAIELFSSSLEDADAEAGTSGASGDGITAASEGRELES 120

Query: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLRG 180
           EKTVKQRKTN KNLGTEESNMV+T+GEKF TTGMIDQGVSVESNS ETTDNNVFRKLLRG
Sbjct: 121 EKTVKQRKTNAKNLGTEESNMVITKGEKFKTTGMIDQGVSVESNSTETTDNNVFRKLLRG 180

Query: 181 PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG 240
           PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG
Sbjct: 181 PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG 240

Query: 241 GHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCV 300
           GHHAKDCPEKHMDVSS LKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCY+CK+FGHLCCV
Sbjct: 241 GHHAKDCPEKHMDVSSSLKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYVCKEFGHLCCV 300

Query: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR 360
           DSTSDTTIVSCYKCGQTGHTGLSCSRL GAVSPSTCYRCREEGHFARECTSATKVGKRSR
Sbjct: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLCGAVSPSTCYRCREEGHFARECTSATKVGKRSR 360

Query: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKISHEDKTLTSLESQE-GSLGIK 417
           RLSNPKSMSQIEETNHMGS+SAPHDLAKAHNNEKKI+HEDKTLTSLESQ+ GSLGIK
Sbjct: 361 RLSNPKSMSQIEETNHMGSRSAPHDLAKAHNNEKKINHEDKTLTSLESQDKGSLGIK 417

[Close]
BLAST of CmoCh10G003640 vs. NCBI nr
Match: XP_022988495.1 (zinc finger CCHC domain-containing protein 7-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 801.2 bits (2068), Expect = 4.2e-228
Identity = 401/417 (96.16%), Postives = 408/417 (97.84%), Query Frame = 0 

Query: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLV 60
           MGRRGKQRKFEFEDDEDELQGVKPGD NSA SVSSDDEANEDLSLNVVEKAL+LRAGMLV
Sbjct: 1   MGRRGKQRKFEFEDDEDELQGVKPGDLNSANSVSSDDEANEDLSLNVVEKALQLRAGMLV 60

Query: 61  IDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES 120
           IDAGNNKDGNCEQDGNG IVAIGAIELF+SSLEDADAEAGTSGASGDGITAASEGRELES
Sbjct: 61  IDAGNNKDGNCEQDGNGDIVAIGAIELFSSSLEDADAEAGTSGASGDGITAASEGRELES 120

Query: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLRG 180
           EKTVKQRKTNVKNLGTEESNMVVTEGEKF TTGMIDQGVSVESNS ETTDNNVFRKLLRG
Sbjct: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFETTGMIDQGVSVESNSTETTDNNVFRKLLRG 180

Query: 181 PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG 240
           PRYFDPP+SWGTCYTCGEEGHNAVNCSSAKRKRSCFVC SVEHNARSCSKARDCYICKKG
Sbjct: 181 PRYFDPPESWGTCYTCGEEGHNAVNCSSAKRKRSCFVCRSVEHNARSCSKARDCYICKKG 240

Query: 241 GHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCV 300
           GHHAKDCPEKHMDVSS LKLCLKCR+SGHDMFSCQNLYPDDDLKNIQCY+CKKFGHLCCV
Sbjct: 241 GHHAKDCPEKHMDVSSSLKLCLKCRNSGHDMFSCQNLYPDDDLKNIQCYVCKKFGHLCCV 300

Query: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR 360
           DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTS TKVGKRSR
Sbjct: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSTTKVGKRSR 360

Query: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKISHEDKTLTSLESQE-GSLGIK 417
           RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKI+HEDKTLTSLESQ+ GSLGIK
Sbjct: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKINHEDKTLTSLESQDKGSLGIK 417

[Close]
BLAST of CmoCh10G003640 vs. NCBI nr
Match: KAG7023332.1 (Cellular nucleic acid-binding protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 726.9 bits (1875), Expect = 1.0e-205
Identity = 373/417 (89.45%), Postives = 378/417 (90.65%), Query Frame = 0 

Query: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLV 60
           MGRRGKQRKFEFEDDEDELQGVKPGDSNSA SVSSDDEANEDLSLNVVEKALRLRAGMLV
Sbjct: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSANSVSSDDEANEDLSLNVVEKALRLRAGMLV 60

Query: 61  IDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES 120
           IDAGNNKDGNCEQDGNG IVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES
Sbjct: 61  IDAGNNKDGNCEQDGNGDIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES 120

Query: 121 EKTVKQRKTNVKNLGTEESNMVVTEGEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLRG 180
           EKTVKQRKTNVKNLGTEESNMVVT+GEKF TTGMIDQGVSVESN  ETTDNNVFRKLLRG
Sbjct: 121 EKTVKQRKTNVKNLGTEESNMVVTDGEKFETTGMIDQGVSVESNCTETTDNNVFRKLLRG 180

Query: 181 PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG 240
           PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG
Sbjct: 181 PRYFDPPDSWGTCYTCGEEGHNAVNCSSAKRKRSCFVCGSVEHNARSCSKARDCYICKKG 240

Query: 241 GHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCV 300
           GHHAK+CPEKHMDVSS LKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCY+CKKFGHLCCV
Sbjct: 241 GHHAKECPEKHMDVSSSLKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYVCKKFGHLCCV 300

Query: 301 DSTSDTTIVSCYKCGQTGHTGLSCSRLRGAVSPSTCYRCREEGHFARECTSATKVGKRSR 360
           DSTSDTTIVSCYKCGQTGHTGL                                VGKRSR
Sbjct: 301 DSTSDTTIVSCYKCGQTGHTGL--------------------------------VGKRSR 360

Query: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKISHEDKTLTSLESQE-GSLGIK 417
           RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKI+HEDKTLTSLESQ+ GSLGIK
Sbjct: 361 RLSNPKSMSQIEETNHMGSKSAPHDLAKAHNNEKKINHEDKTLTSLESQDKGSLGIK 385

[Close]
BLAST of CmoCh10G003640 vs. TAIR 10
Match: AT3G43590.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 252.3 bits (643), Expect = 6.8e-67
Identity = 158/390 (40.51%), Postives = 214/390 (54.87%), Query Frame = 0 

Query: 1   MGRRGKQRKFEFED--DEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGM 60
           M R+ K  KF F+D  DED    V   + ++ +    DDEANEDLSL ++EKAL  R   
Sbjct: 1   MPRQNKDEKFVFDDGEDEDREDPVAITEVDNGEE-EDDDEANEDLSLKILEKALSRR--- 60

Query: 61  LVIDAGNNKDGNCEQD-GNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRE 120
              D GN  D +   D G  + V +  ++                          S+ ++
Sbjct: 61  ---DVGNKLDSDLSSDSGVVSTVMVNGVK--------------------------SKVKK 120

Query: 121 LESEKTVKQRKTNVKN-----LGTEESNMVVTEGEK-FGTTGMIDQGVSVESNSPETTDN 180
            ES K +K+ K    +        ++   VV E  K  G    +++  S E  + ET  N
Sbjct: 121 SESSKKMKRNKLEADHEIPIVWNDQDEEKVVEEIVKGEGEDDEVER--SDEPKTEETASN 180

Query: 181 NVFRKLLRGPRYFDPPDS-WGTCYTCGEEGHNAVNC-SSAKRKRSCFVCGSVEHNARSCS 240
            V +KLLRG RYFDPPD+ W +CY+CGE+GH + NC +  KR++ CF+CGS+EH A+ CS
Sbjct: 181 LVLKKLLRGARYFDPPDAGWVSCYSCGEQGHTSFNCPTPTKRRKPCFICGSLEHGAKQCS 240

Query: 241 KARDCYICKKGGHHAKDCPEKHMDVSSILKLCLKCRDSGHDMFSCQNLYPDDDLKNIQCY 300
           K  DCYICKK GH AKDCP+K+ +  S   +CL+C D GHDM  C+  Y  +DLK++QCY
Sbjct: 241 KGHDCYICKKTGHRAKDCPDKYKN-GSKGAVCLRCGDFGHDMILCKYEYSKEDLKDVQCY 300

Query: 301 ICKKFGHLCCVD-STSDTTIVSCYKCGQTGHTGLSC---------------SRLRGAVSP 360
           ICK FGHLCCV+   S +  VSCY+CGQ GH+GL+C                RL  +   
Sbjct: 301 ICKSFGHLCCVEPGNSLSWAVSCYRCGQLGHSGLACGRHYEESNENDSATPERLFNSREA 354

Query: 361 STCYRCREEGHFARECTSATKVGKRSRRLS 364
           S CYRC EEGHFAREC +++ +     R S
Sbjct: 361 SECYRCGEEGHFARECPNSSSISTSHGRES 354

[Close]
BLAST of CmoCh10G003640 vs. TAIR 10
Match: AT5G36240.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 106.3 bits (264), Expect = 6.0e-23
Identity = 48/99 (48.48%), Postives = 66/99 (66.67%), Query Frame = 0 

Query: 259 KLCLKCRDSGHDMFSCQNLYPDDDLKNIQCYICKKFGHLCCVD-STSDTTIVSCYKCGQT 318
           ++CL+C   GHDM  C+  Y  +DLKNI+CY+C   GHLCC++   + +  VSCY+CGQ 
Sbjct: 26  EVCLRCGGFGHDMTLCKYEYSHEDLKNIKCYVCNSLGHLCCIEPGHTQSWTVSCYRCGQL 85

Query: 319 GHTGLSCSR-LRGAVSPSTCYRCREEGHFARECTSATKV 356
           GHTGL+C R    +VSPS C+ C  EGHF  +C ++  V
Sbjct: 86  GHTGLACGRHYDDSVSPS-CFICGREGHFEHQCHNSFSV 123

[Close]
BLAST of CmoCh10G003640 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 )

HSP 1 Score: 92.4 bits (228), Expect = 9.0e-19
Identity = 61/196 (31.12%), Postives = 85/196 (43.37%), Query Frame = 0 

Query: 193 CYTCGEEGHNAVNC-------SSAKRKR---SCFVCGSVEHNARSCSKARD--------- 252
           CY CGE GH + +C          +R R    C+ CG   H AR C+ A +         
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKG 161

Query: 253 ----CYICKKGGHHAKDCPEKHM---DVSSILK----LCLKCRDSGHDMFSCQNLYPDDD 312
               CY C   GH A+DC +K +   D    +K     C  C D GH    C       +
Sbjct: 162 GNDGCYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGN 221

Query: 313 LK-----NIQCYICKKFGHLCCVDSTSDTTIVSCYKCGQTGHTGLSCSR--LRGAVSPST 352
           ++     +  CY C   GH+    +T       CY+CG +GH    C +    G  + + 
Sbjct: 222 VRSGGGGSGTCYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDCDQRGSGGGGNDNA 281

[Close]
BLAST of CmoCh10G003640 vs. TAIR 10
Match: AT3G43490.1 (Zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 91.3 bits (225), Expect = 2.0e-18
Identity = 75/236 (31.78%), Postives = 106/236 (44.92%), Query Frame = 0 

Query: 1   MGRRGKQRKFEFEDDEDELQGVKPGDSNSAKSVSSDDEANEDLSLNVVEKALRLRAGMLV 60
           M  + K   F F+D ED +  +             DDEANEDL L ++EKA   R     
Sbjct: 1   MPPKRKDINFLFDDGEDTVAII-------------DDEANEDLRLKILEKAFSRR----- 60

Query: 61  IDAGNNKDGNCEQDGNGAIVAIGAIELFASSLEDADAEAGTSGASGDGITAASEGRELES 120
            +  N  D +   D                            G     +    +  E+++
Sbjct: 61  -NVDNKLDSDLSFD---------------------------PGVVSTVMVNGGKSEEVKN 120

Query: 121 EKTVKQRKTNVKNLGTEESNMVVTE-GEKFGTTGMIDQGVSVESNSPETTDNNVFRKLLR 180
            K+ K+ K N      E +N +VT   E+     M++  V  E    ETT N+V  KLLR
Sbjct: 121 SKSNKKMKRN----KLEAANEIVTHCVERQDEDNMVEDVVRGEEEDGETTSNSVMTKLLR 180

Query: 181 GPRYFDPPDS-WGTCYTCGEEGHNAVNCSSAKR-KRSCFVCGSVEHNARSCSKARD 234
           G RYFDP D+ W TCY+CGE+ H  V+C +    ++SCF+C S+EH AR C+K  D
Sbjct: 181 GARYFDPLDAGWVTCYSCGEKDHITVSCPTLTNCRKSCFICASLEHGARQCTKVWD 186

[Close]
BLAST of CmoCh10G003640 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 )

HSP 1 Score: 84.3 bits (207), Expect = 2.5e-16
Identity = 68/209 (32.54%), Postives = 85/209 (40.67%), Query Frame = 0 

Query: 189 SWGTCYTCGEEGHNAVNCSSAKRKRS--------------CFVCGSVEHNARSCSKA--- 248
           S G C+ CGE GH A +C      +S              C++CG V H AR C ++   
Sbjct: 92  SGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGG 151

Query: 249 ---------RDCYICKKGGHHAKDCPEKH--------MDVSSILKLCLKCRDSGHDMFSC 308
                    R CY C + GH AKDC                S    C  C   GH    C
Sbjct: 152 NSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMCGGVGHFARDC 211

Query: 309 -QNLYPDDDLKNIQCYICKKFGHLC--C---VDSTSDTTIVSCYKCGQTGHTGLSCSRLR 352
            QN   +       CY C   GH+   C   + S       +CY+CG TGH    C R R
Sbjct: 212 RQNGGGNVGGGGSTCYTCGGVGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDCDR-R 271

The following BLAST results are available for this feature:
BLAST of CmoCh10G003640 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3T0Q63.8e-2235.96Cellular nucleic acid-binding protein OS=Bos taurus OX=9913 GN=CNBP PE=2 SV=1[more]
O423958.5e-2235.56Cellular nucleic acid-binding protein OS=Gallus gallus OX=9031 GN=CNBP PE=2 SV=1[more]
P626332.5e-2134.59Cellular nucleic acid-binding protein OS=Homo sapiens OX=9606 GN=CNBP PE=1 SV=1[more]
Q5R5R52.5e-2134.59Cellular nucleic acid-binding protein OS=Pongo abelii OX=9601 GN=CNBP PE=2 SV=1[more]
P626342.5e-2134.59Cellular nucleic acid-binding protein OS=Rattus norvegicus OX=10116 GN=Cnbp PE=2... [more]
BLAST of CmoCh10G003640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E5C63.8e-23599.76LOW QUALITY PROTEIN: zinc finger CCHC domain-containing protein 7-like OS=Cucurb... [more]
A0A6J1JJQ32.0e-22896.16zinc finger CCHC domain-containing protein 7-like isoform X1 OS=Cucurbita maxima... [more]
A0A6J1JHC25.6e-18683.69zinc finger CCHC domain-containing protein 7-like isoform X2 OS=Cucurbita maxima... [more]
A0A1S3BVV31.2e-15661.51zinc finger CCHC domain-containing protein 7 isoform X4 OS=Cucumis melo OX=3656 ... [more]
A0A1S3BXL13.6e-15661.74zinc finger CCHC domain-containing protein 7 isoform X3 OS=Cucumis melo OX=3656 ... [more]
BLAST of CmoCh10G003640 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022921998.17.9e-23599.76LOW QUALITY PROTEIN: zinc finger CCHC domain-containing protein 7-like [Cucurbit... [more]
KAG6589643.11.8e-23197.60Cellular nucleic acid-binding protein, partial [Cucurbita argyrosperma subsp. so... [more]
XP_023516900.16.5e-22996.16zinc finger CCHC domain-containing protein 7-like [Cucurbita pepo subsp. pepo][more]
XP_022988495.14.2e-22896.16zinc finger CCHC domain-containing protein 7-like isoform X1 [Cucurbita maxima][more]
KAG7023332.11.0e-20589.45Cellular nucleic acid-binding protein, partial [Cucurbita argyrosperma subsp. ar... [more]
BLAST of CmoCh10G003640 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G43590.16.8e-6740.51zinc knuckle (CCHC-type) family protein [more]
AT5G36240.16.0e-2348.48zinc knuckle (CCHC-type) family protein [more]
AT4G36020.19.0e-1931.12cold shock domain protein 1 [more]
AT3G43490.12.0e-1831.78Zinc knuckle (CCHC-type) family protein [more]
AT2G17870.12.5e-1632.54cold shock domain protein 3 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 192..208
e-value: 0.0038
score: 26.1
coord: 260..276
e-value: 2.7
score: 8.6
coord: 233..249
e-value: 0.0063
score: 24.8
coord: 287..300
e-value: 48.0
score: 0.9
coord: 214..230
e-value: 0.055
score: 19.0
coord: 335..351
e-value: 5.6E-5
score: 32.5
coord: 310..326
e-value: 0.16
score: 16.1
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 234..249
e-value: 0.0015
score: 18.6
coord: 335..351
e-value: 4.6E-7
score: 29.6
coord: 191..207
e-value: 4.9E-4
score: 20.1
coord: 310..320
e-value: 0.005
score: 16.9
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 336..351
score: 10.097754
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 193..206
score: 9.702167
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 234..249
score: 9.817547
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 311..324
score: 9.356029
NoneNo IPR availableGENE3D4.10.60.10coord: 113..232
e-value: 7.3E-11
score: 43.7
NoneNo IPR availableGENE3D4.10.60.10coord: 280..325
e-value: 3.5E-6
score: 28.8
NoneNo IPR availableGENE3D4.10.60.10coord: 233..277
e-value: 1.5E-7
score: 33.2
NoneNo IPR availableGENE3D4.10.60.10coord: 326..364
e-value: 3.2E-7
score: 31.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..377
NoneNo IPR availablePANTHERPTHR46978ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 1..405
NoneNo IPR availablePANTHERPTHR46978:SF1ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 1..405
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 302..352
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 231..277
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 186..231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G003640.1CmoCh10G003640.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding