CmoCh10G003140 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G003140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor TCP5-like
Location	Cmo_Chr10: 1404121 .. 1405059 (-)
RNA-Seq Expression	CmoCh10G003140
Synteny	CmoCh10G003140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGAAACTCAAAAGAAAAGGGTTTTGAATCAAAAGAAGAAGGAAAATATAGGTTCCCCAAGGCTCCAACAAGCTCTAGGCAATGGTCAGGGTTTAGAAACCCAAGAATTGTGAGAGTTTCTCGTTCATTTGGTGGCAAAGATAGACATAGCAAAGTTTGTACCATTAGGGGCTTGAGAGATAGAAGGATAAGGCTATCAGTGCCTACCGCCATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATCGACTGGCTCCCCGACGTCACCAAGCTCGATATCGACAAGCTCCCGCCGTTGCAAATCCCAACCGGGTTCTCTCCGTTTCACCAACAGATGCTTTTCCCTCCATATGATCATCATCATCATTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCAATTTTGTAACTCGCTCCCTCCGCCCTTCGCCGTCGACATGAAAGGCGATTCTATCGAGAAAACGAAGATTTGGGATATGGATTTAGCGTTACAAGGAAAAGCTTCTTCATTAACCAAAGGGAAGTGGATTGATGGAAGTAGTAATCAACATGTAGAAGATTACAATTTTACACCTTACAATACTTACAATTCTTCTCAATTTGGGAACAATAATGGAGTTTTTCCATCACAAATTGAGGCTCCAACGAGTTCATCTTCTGCTTCTGCACTCTTCTTTACACCCTATGCTTCATATATTACCAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCCCATGCTTTGTCCAATCCCTTTGTGCCTTCAGCTCTCCACCCTTTTGCTTCACAGAACTTGAAACCCTTTTCAGCTGCAAGCTTCAACTTCAAGCAGCTTCTTCATGCAGCTGACGGTAATGGCACCGACCGCTCCAATAAAGATGGGACGGCTGGTGACTCATAG

mRNA sequence

ATGTTGAGAAACTCAAAAGAAAAGGGTTTTGAATCAAAAGAAGAAGGAAAATATAGGTTCCCCAAGGCTCCAACAAGCTCTAGGCAATGGTCAGGGTTTAGAAACCCAAGAATTGTGAGAGTTTCTCGTTCATTTGGTGGCAAAGATAGACATAGCAAAGTTTGTACCATTAGGGGCTTGAGAGATAGAAGGATAAGGCTATCAGTGCCTACCGCCATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATCGACTGGCTCCCCGACGTCACCAAGCTCGATATCGACAAGCTCCCGCCGTTGCAAATCCCAACCGGGTTCTCTCCGTTTCACCAACAGATGCTTTTCCCTCCATATGATCATCATCATCATTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCAATTTTGTAACTCGCTCCCTCCGCCCTTCGCCGTCGACATGAAAGGCGATTCTATCGAGAAAACGAAGATTTGGGATATGGATTTAGCGTTACAAGGAAAAGCTTCTTCATTAACCAAAGGGAAGTGGATTGATGGAAGTAGTAATCAACATGTAGAAGATTACAATTTTACACCTTACAATACTTACAATTCTTCTCAATTTGGGAACAATAATGGAGTTTTTCCATCACAAATTGAGGCTCCAACGAGTTCATCTTCTGCTTCTGCACTCTTCTTTACACCCTATGCTTCATATATTACCAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCCCATGCTTTGTCCAATCCCTTTGTGCCTTCAGCTCTCCACCCTTTTGCTTCACAGAACTTGAAACCCTTTTCAGCTGCAAGCTTCAACTTCAAGCAGCTTCTTCATGCAGCTGACGGTAATGGCACCGACCGCTCCAATAAAGATGGGACGGCTGGTGACTCATAG

Coding sequence (CDS)

ATGTTGAGAAACTCAAAAGAAAAGGGTTTTGAATCAAAAGAAGAAGGAAAATATAGGTTCCCCAAGGCTCCAACAAGCTCTAGGCAATGGTCAGGGTTTAGAAACCCAAGAATTGTGAGAGTTTCTCGTTCATTTGGTGGCAAAGATAGACATAGCAAAGTTTGTACCATTAGGGGCTTGAGAGATAGAAGGATAAGGCTATCAGTGCCTACCGCCATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATCGACTGGCTCCCCGACGTCACCAAGCTCGATATCGACAAGCTCCCGCCGTTGCAAATCCCAACCGGGTTCTCTCCGTTTCACCAACAGATGCTTTTCCCTCCATATGATCATCATCATCATTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCAATTTTGTAACTCGCTCCCTCCGCCCTTCGCCGTCGACATGAAAGGCGATTCTATCGAGAAAACGAAGATTTGGGATATGGATTTAGCGTTACAAGGAAAAGCTTCTTCATTAACCAAAGGGAAGTGGATTGATGGAAGTAGTAATCAACATGTAGAAGATTACAATTTTACACCTTACAATACTTACAATTCTTCTCAATTTGGGAACAATAATGGAGTTTTTCCATCACAAATTGAGGCTCCAACGAGTTCATCTTCTGCTTCTGCACTCTTCTTTACACCCTATGCTTCATATATTACCAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCCCATGCTTTGTCCAATCCCTTTGTGCCTTCAGCTCTCCACCCTTTTGCTTCACAGAACTTGAAACCCTTTTCAGCTGCAAGCTTCAACTTCAAGCAGCTTCTTCATGCAGCTGACGGTAATGGCACCGACCGCTCCAATAAAGATGGGACGGCTGGTGACTCATAG

Protein sequence

MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGTDRSNKDGTAGDS

Homology

[Close]

BLAST of CmoCh10G003140 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.2e-42
Identity = 122/273 (44.69%), Postives = 160/273 (58.61%), Query Frame = 0


Query: 21  PKAPTSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQ 80
           P + +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQ
Sbjct: 36  PSSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQ 95

Query: 81  DKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYSSSSSSS 140
           D+L L QPSKVIDWL +  K D+DKLPPLQ P GF+  +  ++F     +  +  S SS+
Sbjct: 96  DRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIF----GNSGFGESPSST 155

Query: 141 SSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWI--DGSSNQHVED 200
           +S++    +L      D+ G S  + ++ D     Q ++  L KGKWI  D +SNQ  + 
Sbjct: 156 TSTTFPGTNLGFLENWDLGGSSRTRARLTD-TTTTQRESFDLDKGKWIKNDENSNQDHQG 215

Query: 201 YN------FTPYNTYNSS--------------QFGNNNGVFPSQIEA---------PTSS 260
           +N      F   N YN++              Q GNN  V  S + A         P SS
Sbjct: 216 FNTNHQQQFPLTNPYNNTSAYYNLGHLQQSLDQSGNNVTVAISNVAANNNNNLNLHPPSS 275

[Close]

BLAST of CmoCh10G003140 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.4e-31
Identity = 71/113 (62.83%), Postives = 83/113 (73.45%), Query Frame = 0


Query: 16  GKYRFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPT 75
           GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPT
Sbjct: 39  GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPT 98

Query: 76  AIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQI-PTGFSPFHQQMLF 124
           AIQLYDLQ++L + QPSK +DWL D  K +ID+LPPL I P  FS F+    F
Sbjct: 99  AIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSF 151

[Close]

BLAST of CmoCh10G003140 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-29
Identity = 78/157 (49.68%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 33  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 92
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 93  WLPDVTKLDIDKLPPLQIPTGFSPFHQQM------------------------------- 148
           WL +V K D+D LPPLQ P GF   +  +                               
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGFHQLNPNLTGLGESFPGVFDLGRTQREALDLEKRKWVNL 138

[Close]

BLAST of CmoCh10G003140 vs. ExPASy Swiss-Prot
Match: Q9C758 (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.5e-18
Identity = 95/305 (31.15%), Postives = 140/305 (45.90%), Query Frame = 0


Query: 7   EKGFESKEEGKYRFPKAPTS-SRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRI 66
           +K  E +     RF +  T   R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRI
Sbjct: 10  QKHQEQQSRKLQRFSEDNTGLMRNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRI 69

Query: 67  RLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQMLFPP 126
           RLSV TAIQ YDLQD+L   QPSK ++WL +     I  LP              +L   
Sbjct: 70  RLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLP--------------LLNTN 129

Query: 127 YDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTK---IWDMDLALQGKASSLT 186
           +DH     + + S+ SS    +SL      +++G + E+ +     D D  LQ   SS T
Sbjct: 130 FDHLDQNQNQTKSACSSGTSESSLLSLSRTEIRGKARERARERTAKDRDKDLQNAHSSFT 189

Query: 187 KGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSS-------------- 246
             + + G  +Q   + N+T          G ++   P Q++ P SS              
Sbjct: 190 --QLLTGGFDQQPSNRNWT----------GGSDCFNPVQLQIPNSSSQEPMNHPFSFVPD 249

Query: 247 -----SSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSA 289
                SS+S+     Y+S  T    S   FL++N++      + S     +S +  P  +
Sbjct: 250 YNFGISSSSSAINGGYSSRGTLQSNSQSLFLNNNNNITQRSSISS-----SSSSSSPMDS 282

[Close]

BLAST of CmoCh10G003140 vs. ExPASy Swiss-Prot
Match: Q93V43 (Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.8e-16
Identity = 53/109 (48.62%), Postives = 67/109 (61.47%), Query Frame = 0


Query: 37  RIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPD 96
           RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV TA+Q YDLQD+L   QPSK ++WL  
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 97  VTKLDIDKLPPL---QIPTGFSPFHQQMLFPPYDHHHHYSSSSSSSSSS 143
             +  I +LP L     PT       Q L     +    S+ SS+S +S
Sbjct: 92  AAEDSISELPSLNNTHFPTDDENHQNQTLTTVAANSLSKSACSSNSDTS 140

[Close]

BLAST of CmoCh10G003140 vs. ExPASy TrEMBL
Match: A0A6J1E797 (transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430066 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 7.5e-175
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQ 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQ
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQ 120

Query: 121 MLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASS 180
           MLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASS
Sbjct: 121 MLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASS 180

Query: 181 LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA 240
           LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA
Sbjct: 181 LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA 240

Query: 241 SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGT 300
           SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGT
Sbjct: 241 SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGT 300

Query: 301 DRSNKDGTAGDS 313
           DRSNKDGTAGDS
Sbjct: 301 DRSNKDGTAGDS 312

[Close]

BLAST of CmoCh10G003140 vs. ExPASy TrEMBL
Match: A0A6J1E2U7 (transcription factor TCP5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430066 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 9.8e-167
Identity = 297/298 (99.66%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 15  EGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQ 74
           +GKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQ
Sbjct: 3   KGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQ 62

Query: 75  LYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYSS 134
           LYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYSS
Sbjct: 63  LYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYSS 122

Query: 135 SSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQH 194
           SSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQH
Sbjct: 123 SSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQH 182

Query: 195 VEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFL 254
           VEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFL
Sbjct: 183 VEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFL 242

Query: 255 SSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGTDRSNKDGTAGDS 313
           SSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGTDRSNKDGTAGDS
Sbjct: 243 SSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGTDRSNKDGTAGDS 300

[Close]

BLAST of CmoCh10G003140 vs. ExPASy TrEMBL
Match: A0A6J1JE53 (transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 4.3e-162
Identity = 297/318 (93.40%), Postives = 302/318 (94.97%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSS QWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSSQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQ 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWL DVTKLDIDKLPPLQIPTGFSPFHQQ
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120

Query: 121 MLFPPYD--HHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDS----IEKTKIWDMDLAL 180
           M FPPYD  HHHH+     SSSSSSQFCNSLPPPFAV++KGDS    +EKTKIWDMDLAL
Sbjct: 121 MFFPPYDDQHHHHH----HSSSSSSQFCNSLPPPFAVNVKGDSSSTAVEKTKIWDMDLAL 180

Query: 181 QGKASSLTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASAL 240
           QGKASSLTKGKWIDGSSNQHVEDYNFTPYN+YNSSQFGNNNGVFPSQIEAPTSSSSASAL
Sbjct: 181 QGKASSLTKGKWIDGSSNQHVEDYNFTPYNSYNSSQFGNNNGVFPSQIEAPTSSSSASAL 240

Query: 241 FFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHA 300
           FFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHA
Sbjct: 241 FFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHA 300

Query: 301 ADGNGTDRSNKDGTAGDS 313
           ADGNG DRSNKDG AGDS
Sbjct: 301 ADGNGADRSNKDGAAGDS 314

[Close]

BLAST of CmoCh10G003140 vs. ExPASy TrEMBL
Match: A0A0A0LRU6 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 3.0e-115
Identity = 263/408 (64.46%), Postives = 280/408 (68.63%), Query Frame = 0


Query: 1   MLRNSK--EKGFESKEE-------------GKYRFPKAPT-SSRQWSGFRNPRIVRVSRS 60
           MLRN+   +KG E+KEE             GKY FPKAPT SSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDK 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWL DVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPTGFSPFHQQMLFPPY-DHHHHY----SSSSSSSSSSSQFCNSLPPPFAVDMKG 180
           LPPLQIP GFSPFHQQMLFP Y D HHHY    SSSSSSSSSSS+FCNSLPPPF +D+K 
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 180

Query: 181 D-------SIEKTKIWDMDLA-LQGKASS------LTKGKWIDGSSN-----QHVEDY-- 240
                   ++EKTK+WDMDLA LQ KA S       TKGKWIDGS+N     Q VEDY  
Sbjct: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240

Query: 241 ------------------------NFTPYNTYNS---------------SQFGNN---NG 300
                                   N TPYN YNS               SQFGNN   NG
Sbjct: 241 QISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNG 300

Query: 301 VFPSQI-----EAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALH 313
           VFPSQ+     +   SSSS+S+LFFTPYASYITNPFESHIHFLSSNSHALSNPF+ S+LH
Sbjct: 301 VFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360

[Close]

BLAST of CmoCh10G003140 vs. ExPASy TrEMBL
Match: A0A1S3BX07 (transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 3.4e-111
Identity = 255/408 (62.50%), Postives = 278/408 (68.14%), Query Frame = 0


Query: 1   MLRNSK---EKGFESKEE-------------GKYRFPKAPT-SSRQWSGFRNPRIVRVSR 60
           MLRNS    +KG E+KEE             GKY FPKAPT SSRQWSGFRNPRIVRVSR
Sbjct: 9   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 68

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWL DVTKLDID
Sbjct: 69  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 128

Query: 121 KLPPLQIPTGFSPFHQQMLFPPY-DHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGD-- 180
            LPPLQIP GFSPFHQQMLFP Y D HHHY  +SSSSSSSS+FCNS PPPF +D+K    
Sbjct: 129 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHY-YTSSSSSSSSRFCNSQPPPFMLDVKSTDA 188

Query: 181 -----SIEKTKIWDMDLALQGK-------ASSLTKGKWIDGSSN-----QHVEDY----- 240
                ++EKTK+WDMDLA+  +       A++ TKGKWIDGS+N     Q VEDY     
Sbjct: 189 YQTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNEQIS 248

Query: 241 ---------------------NFTPYNTYNS----------------SQFGNN---NGVF 300
                                N TPYN YNS                SQFGNN   NG+F
Sbjct: 249 SQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFGNNNNSNGIF 308

Query: 301 PSQI-----EAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALS-NPFVPSALHP 313
           PSQ+      + +SSSS+S+LFFTPYASYITNPFESHIHFLSSNSHALS NPF+ S+LHP
Sbjct: 309 PSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSSSLHP 368

[Close]

BLAST of CmoCh10G003140 vs. NCBI nr
Match: XP_022921970.1 (transcription factor TCP5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 622.9 bits (1605), Expect = 1.5e-174
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQ 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQ
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQ 120

Query: 121 MLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASS 180
           MLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASS
Sbjct: 121 MLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASS 180

Query: 181 LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA 240
           LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA
Sbjct: 181 LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA 240

Query: 241 SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGT 300
           SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGT
Sbjct: 241 SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGT 300

Query: 301 DRSNKDGTAGDS 313
           DRSNKDGTAGDS
Sbjct: 301 DRSNKDGTAGDS 312

[Close]

BLAST of CmoCh10G003140 vs. NCBI nr
Match: KAG7023291.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 613.2 bits (1580), Expect = 1.2e-171
Identity = 309/312 (99.04%), Postives = 309/312 (99.04%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQ 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWL DVTKLDIDKLPPLQIPTGFSPFHQQ
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120

Query: 121 MLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASS 180
           MLFPPYDHHHHYSSSSSSSSSSSQFCNSLP PFAVDMKGDSIEKTKIWDMDLALQGKASS
Sbjct: 121 MLFPPYDHHHHYSSSSSSSSSSSQFCNSLPLPFAVDMKGDSIEKTKIWDMDLALQGKASS 180

Query: 181 LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA 240
           LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA
Sbjct: 181 LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA 240

Query: 241 SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGT 300
           SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNG 
Sbjct: 241 SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGA 300

Query: 301 DRSNKDGTAGDS 313
           DRSNKDGTAGDS
Sbjct: 301 DRSNKDGTAGDS 312

[Close]

BLAST of CmoCh10G003140 vs. NCBI nr
Match: KAG6589600.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 606.3 bits (1562), Expect = 1.5e-169
Identity = 307/312 (98.40%), Postives = 307/312 (98.40%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQ 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWL DVTKLDIDKLPPLQIPTGFSPFHQQ
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120

Query: 121 MLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASS 180
           MLFPPYDHHHHY SSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASS
Sbjct: 121 MLFPPYDHHHHY-SSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASS 180

Query: 181 LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA 240
           LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA
Sbjct: 181 LTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYA 240

Query: 241 SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGT 300
           SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAAD NG 
Sbjct: 241 SYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADANGA 300

Query: 301 DRSNKDGTAGDS 313
           D SNKDGTAGDS
Sbjct: 301 DPSNKDGTAGDS 311

[Close]

BLAST of CmoCh10G003140 vs. NCBI nr
Match: XP_022921971.1 (transcription factor TCP5-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 595.9 bits (1535), Expect = 2.0e-166
Identity = 297/298 (99.66%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 15  EGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQ 74
           +GKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQ
Sbjct: 3   KGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQ 62

Query: 75  LYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYSS 134
           LYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYSS
Sbjct: 63  LYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYSS 122

Query: 135 SSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQH 194
           SSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQH
Sbjct: 123 SSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWIDGSSNQH 182

Query: 195 VEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFL 254
           VEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFL
Sbjct: 183 VEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFL 242

Query: 255 SSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGTDRSNKDGTAGDS 313
           SSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGTDRSNKDGTAGDS
Sbjct: 243 SSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGTDRSNKDGTAGDS 300

[Close]

BLAST of CmoCh10G003140 vs. NCBI nr
Match: XP_023516672.1 (transcription factor TCP5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 594.3 bits (1531), Expect = 5.9e-166
Identity = 303/314 (96.50%), Postives = 305/314 (97.13%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQ 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWL DVTKLDIDKLPPLQIPTGFSPFHQQ
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120

Query: 121 MLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDS--IEKTKIWDMDLALQGKA 180
           MLFPPYDHHHHY  SSSSSSSSSQFCNSLP PFAVD+KGDS  IEKTKIWDMDLALQGKA
Sbjct: 121 MLFPPYDHHHHY-YSSSSSSSSSQFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKA 180

Query: 181 SSLTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP 240
           SSLTKGKW+DGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP
Sbjct: 181 SSLTKGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP 240

Query: 241 YASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN 300
           YASYITNPFESHIHFLSSN HALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN
Sbjct: 241 YASYITNPFESHIHFLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN 300

Query: 301 GTDRSNKDGTAGDS 313
           G DRSNKDG AGDS
Sbjct: 301 GADRSNKDGAAGDS 313

[Close]

BLAST of CmoCh10G003140 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 172.6 bits (436), Expect = 5.1e-43
Identity = 122/273 (44.69%), Postives = 160/273 (58.61%), Query Frame = 0


Query: 21  PKAPTSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQ 80
           P + +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQ
Sbjct: 36  PSSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQ 95

Query: 81  DKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYSSSSSSS 140
           D+L L QPSKVIDWL +  K D+DKLPPLQ P GF+  +  ++F     +  +  S SS+
Sbjct: 96  DRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIF----GNSGFGESPSST 155

Query: 141 SSSSQFCNSLPPPFAVDMKGDSIEKTKIWDMDLALQGKASSLTKGKWI--DGSSNQHVED 200
           +S++    +L      D+ G S  + ++ D     Q ++  L KGKWI  D +SNQ  + 
Sbjct: 156 TSTTFPGTNLGFLENWDLGGSSRTRARLTD-TTTTQRESFDLDKGKWIKNDENSNQDHQG 215

Query: 201 YN------FTPYNTYNSS--------------QFGNNNGVFPSQIEA---------PTSS 260
           +N      F   N YN++              Q GNN  V  S + A         P SS
Sbjct: 216 FNTNHQQQFPLTNPYNNTSAYYNLGHLQQSLDQSGNNVTVAISNVAANNNNNLNLHPPSS 275

[Close]

BLAST of CmoCh10G003140 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 136.7 bits (343), Expect = 3.1e-32
Identity = 71/113 (62.83%), Postives = 83/113 (73.45%), Query Frame = 0


Query: 16  GKYRFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPT 75
           GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPT
Sbjct: 39  GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPT 98

Query: 76  AIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQI-PTGFSPFHQQMLF 124
           AIQLYDLQ++L + QPSK +DWL D  K +ID+LPPL I P  FS F+    F
Sbjct: 99  AIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSF 151

[Close]

BLAST of CmoCh10G003140 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 136.7 bits (343), Expect = 3.1e-32
Identity = 71/113 (62.83%), Postives = 83/113 (73.45%), Query Frame = 0


Query: 16  GKYRFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPT 75
           GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPT
Sbjct: 39  GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPT 98

Query: 76  AIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQI-PTGFSPFHQQMLF 124
           AIQLYDLQ++L + QPSK +DWL D  K +ID+LPPL I P  FS F+    F
Sbjct: 99  AIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSF 151

[Close]

BLAST of CmoCh10G003140 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-30
Identity = 78/157 (49.68%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 33  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 92
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 93  WLPDVTKLDIDKLPPLQIPTGFSPFHQQM------------------------------- 148
           WL +V K D+D LPPLQ P GF   +  +                               
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGFHQLNPNLTGLGESFPGVFDLGRTQREALDLEKRKWVNL 138

[Close]

BLAST of CmoCh10G003140 vs. TAIR 10
Match: AT1G30210.1 (TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 )

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-19
Identity = 95/305 (31.15%), Postives = 140/305 (45.90%), Query Frame = 0


Query: 7   EKGFESKEEGKYRFPKAPTS-SRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRI 66
           +K  E +     RF +  T   R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRI
Sbjct: 10  QKHQEQQSRKLQRFSEDNTGLMRNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRI 69

Query: 67  RLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQMLFPP 126
           RLSV TAIQ YDLQD+L   QPSK ++WL +     I  LP              +L   
Sbjct: 70  RLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLP--------------LLNTN 129

Query: 127 YDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDSIEKTK---IWDMDLALQGKASSLT 186
           +DH     + + S+ SS    +SL      +++G + E+ +     D D  LQ   SS T
Sbjct: 130 FDHLDQNQNQTKSACSSGTSESSLLSLSRTEIRGKARERARERTAKDRDKDLQNAHSSFT 189

Query: 187 KGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSS-------------- 246
             + + G  +Q   + N+T          G ++   P Q++ P SS              
Sbjct: 190 --QLLTGGFDQQPSNRNWT----------GGSDCFNPVQLQIPNSSSQEPMNHPFSFVPD 249

Query: 247 -----SSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSA 289
                SS+S+     Y+S  T    S   FL++N++      + S     +S +  P  +
Sbjct: 250 YNFGISSSSSAINGGYSSRGTLQSNSQSLFLNNNNNITQRSSISS-----SSSSSSPMDS 282

The following BLAST results are available for this feature:

BLAST of CmoCh10G003140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FME3	7.2e-42	44.69	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
Q9S7W5	4.4e-31	62.83	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
Q9LEZ9	1.8e-29	49.68	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
Q9C758	2.5e-18	31.15	Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1	[more]
Q93V43	1.8e-16	48.62	Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1	[more]

BLAST of CmoCh10G003140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E797	7.5e-175	100.00	transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1E2U7	9.8e-167	99.66	transcription factor TCP5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JE53	4.3e-162	93.40	transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 ...	[more]
A0A0A0LRU6	3.0e-115	64.46	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV...	[more]
A0A1S3BX07	3.4e-111	62.50	transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1	[more]

BLAST of CmoCh10G003140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921970.1	1.5e-174	100.00	transcription factor TCP5-like isoform X1 [Cucurbita moschata]	[more]
KAG7023291.1	1.2e-171	99.04	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589600.1	1.5e-169	98.40	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022921971.1	2.0e-166	99.66	transcription factor TCP5-like isoform X2 [Cucurbita moschata]	[more]
XP_023516672.1	5.9e-166	96.50	transcription factor TCP5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh10G003140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60970.1	5.1e-43	44.69	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT3G02150.1	3.1e-32	62.83	plastid transcription factor 1	[more]
AT3G02150.2	3.1e-32	62.83	plastid transcription factor 1	[more]
AT5G08070.1	1.3e-30	49.68	TCP domain protein 17	[more]
AT1G30210.1	1.8e-19	31.15	TEOSINTE BRANCHED 1, cycloidea, and PCF family 24	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 47..165 e-value: 7.8E-23 score: 81.7
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 47..105 score: 25.584452
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR31072:SF168	TRANSCRIPTION FACTOR TCP5	coord: 18..312
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 18..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G003140.1	CmoCh10G003140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity