CmoCh10G003130 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh10G003130
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr10: 1401153 .. 1402298 (+)
RNA-Seq ExpressionCmoCh10G003130
SyntenyCmoCh10G003130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGATGATTAGTTCTCACAAAGTACGTGGCCATATTTTTAAGATTGGTTCACATGGTTATTTGCTATATAGTAGTTCATCATCCGCTGCCATATTTGGATAACCGTTGCTTGTCTTGCAAGATTAGAAGAGCCTTTTATCCCCTCTACACATTTCATTAGTTTCATGTTTCTTTGTGGCAAATTTTGAAAACTAATCCGGTGAGTACATATTCACCGTTTTTCATAAAGATATTTTCTTGTAGTTGTAGGTTACGAGCATACAGAGAATATTTAGAGATACACAGCTAGAAATCCAGTTTACTCTAGCCAATACATTGCCCTGTATTTTGTAATTTTTTGAAACTTTTACTGCTGGTAGCTGAAATCTATTTCTGACATGGGGATGGAAGATTCGTAGCACGATGTTATGACAAGGATGTAGTTTGATTCATTTAGGACACTTTTGCAATGTACTTCGACGATTATGAAGATTAAATCTGAACTCTGCAATGCTTGGTTATCTCACATATCTTTGGATTTATGGGTTATCTCTGCAAAGCTATCTGACTTATATGCTATACTTCCATCTCTCTCTTAAATTTCTTTGTTCAGGTTTTGAGTTCAAGACATTATATATAGAAGCTCTCGTCAGCAGGAATTTGATTTGTTCTGTTGATGTAAAAGTGAAGAATTCCTGAATATTCCAACTCATTGCAGGCTTTTGCATATGATACCAAGAAATATTGATTCTGTGGTTTCTACCACAATTACCCAGGTGGGTGGCTTGCCATCAAAAGAAGGGTTCAGCCCTGCAAGAGCTTCCTCTCTTCAAACAGGGAAAAAATTCATCCCAAGCTCATATTCGATGCTGTAAATGAGATACTTATCGAAAAATTAGCTCTTTCTGAGGGGGTGCTCCTGAGCCATTGTTGACACCAACAAAGATCGCAAAGAAAGCCCTTGGTGGGCAAAATATTTTGAAACAAATGTTATGAAATAGAACAGTTTCAAGCTTAAGAAGTTTGAATGCAACAACTTCGACCAAGACAAGGATGGCTCAAAAAGCATTCTGCATGCGTCAATCAAGGAGTTGGACAGATTATCGGGGTAACGTTTATGATATTGTGTTAGATGTCGAGCAATCGATGTCAAATACTTGGTGA

mRNA sequence

ATGCTGATGATTAGTTCTCACAAAGTTACGAGCATACAGAGAATATTTAGAGATACACAGCTAGAAATCCAGTTTACTCTAGCCAATACATTGCCCTGTATTTTGCTTTTGCATATGATACCAAGAAATATTGATTCTGTGGTTTCTACCACAATTACCCAGGTGGGTGGCTTGCCATCAAAAGAAGGGTTCAGCCCTGCAAGAGCTTCCTCTCTTCAAACAGGGAAAAAATTCATCCCAAGCTCATATTCGATGCTAACAGTTTCAAGCTTAAGAAGTTTGAATGCAACAACTTCGACCAAGACAAGGATGGCTCAAAAAGCATTCTGCATGCGTCAATCAAGGAGTTGGACAGATTATCGGGGTAACGTTTATGATATTGTGTTAGATGTCGAGCAATCGATGTCAAATACTTGGTGA

Coding sequence (CDS)

ATGCTGATGATTAGTTCTCACAAAGTTACGAGCATACAGAGAATATTTAGAGATACACAGCTAGAAATCCAGTTTACTCTAGCCAATACATTGCCCTGTATTTTGCTTTTGCATATGATACCAAGAAATATTGATTCTGTGGTTTCTACCACAATTACCCAGGTGGGTGGCTTGCCATCAAAAGAAGGGTTCAGCCCTGCAAGAGCTTCCTCTCTTCAAACAGGGAAAAAATTCATCCCAAGCTCATATTCGATGCTAACAGTTTCAAGCTTAAGAAGTTTGAATGCAACAACTTCGACCAAGACAAGGATGGCTCAAAAAGCATTCTGCATGCGTCAATCAAGGAGTTGGACAGATTATCGGGGTAACGTTTATGATATTGTGTTAGATGTCGAGCAATCGATGTCAAATACTTGGTGA

Protein sequence

MLMISSHKVTSIQRIFRDTQLEIQFTLANTLPCILLLHMIPRNIDSVVSTTITQVGGLPSKEGFSPARASSLQTGKKFIPSSYSMLTVSSLRSLNATTSTKTRMAQKAFCMRQSRSWTDYRGNVYDIVLDVEQSMSNTW
Homology
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BLAST of CmoCh10G003130 vs. NCBI nr
Match: KAG7023290.1 (hypothetical protein SDJN02_14315, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 68.6 bits (166), Expect = 5.0e-08
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 104 MAQKAFCMRQSRSWTDYRGNVYDIVLDVEQSM 136
           MAQKAFCMRQSRSWTDYRGNVYDIVLDVEQS+
Sbjct: 1   MAQKAFCMRQSRSWTDYRGNVYDIVLDVEQSI 32

The following BLAST results are available for this feature:
BLAST of CmoCh10G003130 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh10G003130 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh10G003130 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7023290.15.0e-0896.88hypothetical protein SDJN02_14315, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmoCh10G003130 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G003130.1CmoCh10G003130.1mRNA