CmoCh10G003090 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh10G003090
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat
LocationCmo_Chr10: 1374059 .. 1375648 (-)
RNA-Seq ExpressionCmoCh10G003090
SyntenyCmoCh10G003090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCCATTACCGTACCTGCAACTTCGAAGGATTTTAATTCGATCTCTAGCATCGTCTTCTTCGTTATCTGCTGGTTCGTCTTCGAATTTTTTGAATGGATCTGCGAGGAGCTTTCTTTTACATCGGAATTTGACGCCTCTCATCCACCATTTCCGTCATCATGGGGCGGCAGGGAGGCTATCTTATCCTTTGCAGCTCTCACTTTCTCATTCGTTCTCCACCGAATCCGGGGAGAATGACGTGGATCAAACATCGCAGTCACTTGCAACCGAGCTTCTCAAGGACCCTGATTTGGATCCTCTTCCCATTACGAAGCGCCTTCAGGTTAGCTTTTCGCATGTTAAACCGAATCCGGTGTTAGTCCTCAATACGCTCAATCTCTCCTCGGAAGCTGGACGGACGGTGTTGGGGTTTAATGAGTGGTTAGTATCGAATCCTGATTTTCATCACACGGATGAGACTATCTCGTATTTTGTTGATTATTTTGGTCGTAGAAAGGATTTCAATGCGATTCATGAAGTTCTTGTGAAAGGTTTAGGTATCAGTGGGGCTAAAACCCTGCGGTCGTCTATTGATCGGTTCGCTCGTGCCGGGCGACCGACAAAGCTGATCTCATTTTTTGAGACGATGGAGAAAAATTACGGGCTTAAGAGGGATAAAGAGTCACTTAGAACGGTGGTGGAGAAGCTTTGTGAAAACGGCTACACGAGCCATGCTGTAAAGATAGTCAAAGACTTGGCGAACGAGTTTTTCCCTGACGAAGCAATATGCGATTCTCTGATCAAAGGATGGTGCGTCAATGGGAAACTAGATGAAGCAAAAAGGCTGGCGGGTGAGATGTACAGGGGAGGGTTTGAGTTAGGGACAACGGCATATAATGATCTACTTGACTGTGCTAGCAAGCTCCGTAGGAAAAAGGATCCGTTCAGGCTTCATTCTGAAGCTGAGGAAATTCTGGTGGAAATGGATTATCGTGGGGTTCCACGAAATGTGGAAACATTCAATGTGCTGATCAATAATTTGTGCAAGATCAGGAAAACTACCGATGCATTAGATTTGTTTCATCGAATGGGGGAGTGGGGATGCCATCCTAATGCTGAAACGTTCATTATTTTGACTAAAAGTCTGTATCAAGCAGCAAGGACGGGAGAGGGGGATGAAATGATTGACAGGATGAGGTCTGCAGGACATGGTGATGCACTTGATAAGAAGACTTACTATGAGTTTCTTAACATTTTGTGTGGGATCGAGAGGATTGATCATGCCTTGACTGTCTTTGAAAAAATGAAGAAGGAGGGGTGTGAACCTGGGATTAAGACATATGAGCTATTAATGGGAAATCTCTGTGCTCATAATCATCTGGACAAAGCAAATTCACTCTTTAATGAAGCTCAAAAACGGGGAGTGCCAGTTACTCCAAAAGCATATCAGGTGGATCCAGGATATGTGAAGAAGCCAAAGGTAAAGAACCTCGAGAAGAAGAGGGAGACGTTGCCCGAAAAAATGGCGAGGAAGAGGAGGCGACTGAAGCAAATTCGACTTAGTTTTGTTAAGAAACCGAAAAAAGGCATGCGCAGAGCATTTTGA

mRNA sequence

ATGCCGCCATTACCGTACCTGCAACTTCGAAGGATTTTAATTCGATCTCTAGCATCGTCTTCTTCGTTATCTGCTGGTTCGTCTTCGAATTTTTTGAATGGATCTGCGAGGAGCTTTCTTTTACATCGGAATTTGACGCCTCTCATCCACCATTTCCGTCATCATGGGGCGGCAGGGAGGCTATCTTATCCTTTGCAGCTCTCACTTTCTCATTCGTTCTCCACCGAATCCGGGGAGAATGACGTGGATCAAACATCGCAGTCACTTGCAACCGAGCTTCTCAAGGACCCTGATTTGGATCCTCTTCCCATTACGAAGCGCCTTCAGGTTAGCTTTTCGCATGTTAAACCGAATCCGGTGTTAGTCCTCAATACGCTCAATCTCTCCTCGGAAGCTGGACGGACGGTGTTGGGGTTTAATGAGTGGTTAGTATCGAATCCTGATTTTCATCACACGGATGAGACTATCTCGTATTTTGTTGATTATTTTGGTCGTAGAAAGGATTTCAATGCGATTCATGAAGTTCTTGTGAAAGGTTTAGGTATCAGTGGGGCTAAAACCCTGCGGTCGTCTATTGATCGGTTCGCTCGTGCCGGGCGACCGACAAAGCTGATCTCATTTTTTGAGACGATGGAGAAAAATTACGGGCTTAAGAGGGATAAAGAGTCACTTAGAACGGTGGTGGAGAAGCTTTGTGAAAACGGCTACACGAGCCATGCTGTAAAGATAGTCAAAGACTTGGCGAACGAGTTTTTCCCTGACGAAGCAATATGCGATTCTCTGATCAAAGGATGGTGCGTCAATGGGAAACTAGATGAAGCAAAAAGGCTGGCGGGTGAGATGTACAGGGGAGGGTTTGAGTTAGGGACAACGGCATATAATGATCTACTTGACTGTGCTAGCAAGCTCCGTAGGAAAAAGGATCCGTTCAGGCTTCATTCTGAAGCTGAGGAAATTCTGGTGGAAATGGATTATCGTGGGGTTCCACGAAATGTGGAAACATTCAATGTGCTGATCAATAATTTGTGCAAGATCAGGAAAACTACCGATGCATTAGATTTGTTTCATCGAATGGGGGAGTGGGGATGCCATCCTAATGCTGAAACGTTCATTATTTTGACTAAAAGTCTGTATCAAGCAGCAAGGACGGGAGAGGGGGATGAAATGATTGACAGGATGAGGTCTGCAGGACATGGTGATGCACTTGATAAGAAGACTTACTATGAGTTTCTTAACATTTTGTGTGGGATCGAGAGGATTGATCATGCCTTGACTGTCTTTGAAAAAATGAAGAAGGAGGGGTGTGAACCTGGGATTAAGACATATGAGCTATTAATGGGAAATCTCTGTGCTCATAATCATCTGGACAAAGCAAATTCACTCTTTAATGAAGCTCAAAAACGGGGAGTGCCAGTTACTCCAAAAGCATATCAGGTGGATCCAGGATATGTGAAGAAGCCAAAGGTAAAGAACCTCGAGAAGAAGAGGGAGACGTTGCCCGAAAAAATGGCGAGGAAGAGGAGGCGACTGAAGCAAATTCGACTTAGTTTTGTTAAGAAACCGAAAAAAGGCATGCGCAGAGCATTTTGA

Coding sequence (CDS)

ATGCCGCCATTACCGTACCTGCAACTTCGAAGGATTTTAATTCGATCTCTAGCATCGTCTTCTTCGTTATCTGCTGGTTCGTCTTCGAATTTTTTGAATGGATCTGCGAGGAGCTTTCTTTTACATCGGAATTTGACGCCTCTCATCCACCATTTCCGTCATCATGGGGCGGCAGGGAGGCTATCTTATCCTTTGCAGCTCTCACTTTCTCATTCGTTCTCCACCGAATCCGGGGAGAATGACGTGGATCAAACATCGCAGTCACTTGCAACCGAGCTTCTCAAGGACCCTGATTTGGATCCTCTTCCCATTACGAAGCGCCTTCAGGTTAGCTTTTCGCATGTTAAACCGAATCCGGTGTTAGTCCTCAATACGCTCAATCTCTCCTCGGAAGCTGGACGGACGGTGTTGGGGTTTAATGAGTGGTTAGTATCGAATCCTGATTTTCATCACACGGATGAGACTATCTCGTATTTTGTTGATTATTTTGGTCGTAGAAAGGATTTCAATGCGATTCATGAAGTTCTTGTGAAAGGTTTAGGTATCAGTGGGGCTAAAACCCTGCGGTCGTCTATTGATCGGTTCGCTCGTGCCGGGCGACCGACAAAGCTGATCTCATTTTTTGAGACGATGGAGAAAAATTACGGGCTTAAGAGGGATAAAGAGTCACTTAGAACGGTGGTGGAGAAGCTTTGTGAAAACGGCTACACGAGCCATGCTGTAAAGATAGTCAAAGACTTGGCGAACGAGTTTTTCCCTGACGAAGCAATATGCGATTCTCTGATCAAAGGATGGTGCGTCAATGGGAAACTAGATGAAGCAAAAAGGCTGGCGGGTGAGATGTACAGGGGAGGGTTTGAGTTAGGGACAACGGCATATAATGATCTACTTGACTGTGCTAGCAAGCTCCGTAGGAAAAAGGATCCGTTCAGGCTTCATTCTGAAGCTGAGGAAATTCTGGTGGAAATGGATTATCGTGGGGTTCCACGAAATGTGGAAACATTCAATGTGCTGATCAATAATTTGTGCAAGATCAGGAAAACTACCGATGCATTAGATTTGTTTCATCGAATGGGGGAGTGGGGATGCCATCCTAATGCTGAAACGTTCATTATTTTGACTAAAAGTCTGTATCAAGCAGCAAGGACGGGAGAGGGGGATGAAATGATTGACAGGATGAGGTCTGCAGGACATGGTGATGCACTTGATAAGAAGACTTACTATGAGTTTCTTAACATTTTGTGTGGGATCGAGAGGATTGATCATGCCTTGACTGTCTTTGAAAAAATGAAGAAGGAGGGGTGTGAACCTGGGATTAAGACATATGAGCTATTAATGGGAAATCTCTGTGCTCATAATCATCTGGACAAAGCAAATTCACTCTTTAATGAAGCTCAAAAACGGGGAGTGCCAGTTACTCCAAAAGCATATCAGGTGGATCCAGGATATGTGAAGAAGCCAAAGGTAAAGAACCTCGAGAAGAAGAGGGAGACGTTGCCCGAAAAAATGGCGAGGAAGAGGAGGCGACTGAAGCAAATTCGACTTAGTTTTGTTAAGAAACCGAAAAAAGGCATGCGCAGAGCATTTTGA

Protein sequence

MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGRLSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPVLVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGLGISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHAVKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCASKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGEWGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERIDHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVDPGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF
Homology
BLAST of CmoCh10G003090 vs. ExPASy Swiss-Prot
Match: Q9FME4 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 1.3e-171
Identity = 311/531 (58.57%), Postives = 392/531 (73.82%), Query Frame = 0

Query: 1   MPP-LPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAG 60
           MPP LP LQLRR+L+RS  SSSS++   S   +  S           PL        ++ 
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQPRIISS----------KPLFSPLPPSRSSI 60

Query: 61  RLSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNP 120
             ++P +   S   + ES   D ++ + S + EL  +PD +   I++R  +SFSH+ PNP
Sbjct: 61  FSTFPSRF-FSSETNAESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPNP 120

Query: 121 VLVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKG 180
            L+L TLNLS EAGR  LGFNEWL SN +F HTDET+S+FVDYFGRRKDF  + E++ K 
Sbjct: 121 DLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKY 180

Query: 181 LGISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSH 240
            GI+G KTL S+IDR  RAGRP ++  FFE ME +YGLKRDKESL  VV+KLCE G+ S 
Sbjct: 181 KGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASI 240

Query: 241 AVKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDC 300
           A K+VK+ ANE FPDE ICD LI GWC+  KLDEA RLAGEM RGGFE+GT AYN +LDC
Sbjct: 241 AEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDC 300

Query: 301 ASKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMG 360
             KL RKKDPF+L  E E++L+EM++RGVPRN ETFNVLINNLCKIR+T +A+ LF RMG
Sbjct: 301 VCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMG 360

Query: 361 EWGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIER 420
           EWGC P+AET+++L +SLYQAAR GEGDEMID+M+SAG+G+ L+KK YY FL ILCGIER
Sbjct: 361 EWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIER 420

Query: 421 IDHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQV 480
           ++HA++VF+ MK  GC+PGIKTY+LLMG +CA+N L +AN L+ EA K+G+ V+PK Y+V
Sbjct: 421 LEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRV 480

Query: 481 DPGYVKKPKVKNLE---KKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRR 528
           DP ++KK K K ++   KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 DPRFMKK-KTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

BLAST of CmoCh10G003090 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.6e-33
Identity = 96/369 (26.02%), Postives = 167/369 (45.26%), Query Frame = 0

Query: 108 LQVSFSHVKPNPVLVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRK 167
           L ++ S +   P L++  L+   +AG     F  W    P + H+ E     V    + +
Sbjct: 86  LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145

Query: 168 DFNAIHEVLVKGLGISGAKTLRSSI-----DRFARAGRPTKLISFFETMEKNYGLKRDKE 227
            F A+   L++ +  +  + +   +      RFA A    K +   + M K YGL+ D+ 
Sbjct: 146 QFGAVWG-LIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEY 205

Query: 228 SLRTVVEKLCENGYTSHAVKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMY 287
               +++ LC+NG    A K+ +D+  +F P+     SL+ GWC  GKL EAK +  +M 
Sbjct: 206 VFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMK 265

Query: 288 RGGFELGTTAYNDLLDCASKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNL 347
             G E     + +LL   +   +  D       A +++ +M  RG   NV  + VLI  L
Sbjct: 266 EAGLEPDIVVFTNLLSGYAHAGKMAD-------AYDLMNDMRKRGFEPNVNCYTVLIQAL 325

Query: 348 CKIRKTTD-ALDLFHRMGEWGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDA 407
           C+  K  D A+ +F  M  +GC  +  T+  L     +     +G  ++D MR  G   +
Sbjct: 326 CRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS 385

Query: 408 LDKKTYYEFLNILCGIERIDHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSL 467
             + TY + +      E+ +  L + EKMK+ GC P +  Y +++   C    + +A  L
Sbjct: 386 --QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRL 443

Query: 468 FNEAQKRGV 471
           +NE +  G+
Sbjct: 446 WNEMEANGL 443

BLAST of CmoCh10G003090 vs. ExPASy Swiss-Prot
Match: Q9FLJ6 (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 5.2e-32
Identity = 95/417 (22.78%), Postives = 192/417 (46.04%), Query Frame = 0

Query: 115 VKPNPVLVLNTLN--LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAI 174
           V P+  LV   +    +  + R +L F  W   +      D+  +Y +     +KD  A+
Sbjct: 63  VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122

Query: 175 HEVLV---KGLGISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVE 234
             +L    K       +T     +   + G+    I  F+ ++K +   +D  ++  ++ 
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIIS 182

Query: 235 KLCENGYTSHAVKIVKDLANEFFPDE-AICDSLIKGWCVNGKLDEAKRLAGEMYRGGFEL 294
            LC  G+   A+ ++    +    +E ++  SL+ GW V   + EA+R+  +M   G   
Sbjct: 183 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 242

Query: 295 GTTAYNDLLDCASKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKT 354
               +N LL C  +    ++P  L  EA  I++EM    +     ++N+L++ L + R+ 
Sbjct: 243 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 302

Query: 355 TDALDLFHRMGEWGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYY 414
            ++  +  +M   GC P+  ++  + + LY   R G+G++++D M   G     ++K YY
Sbjct: 303 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP--ERKFYY 362

Query: 415 EFLNILCGIERIDHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKR 474
           + + +LCG+ER++ AL +FEKMK+       + Y+LL+  LC   + +K   L+ EA   
Sbjct: 363 DLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSI 422

Query: 475 GVPVTPKAYQVDPGYVKKPKVKNLEKKRETLPEKMARKR--RRLKQIRLSFVKKPKK 524
            V ++     +DP   +  K   ++++   +  +    +   R+ + +     KPK+
Sbjct: 423 DVTLSCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKR 476

BLAST of CmoCh10G003090 vs. ExPASy Swiss-Prot
Match: Q0WP85 (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g13420 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.6e-28
Identity = 103/430 (23.95%), Postives = 190/430 (44.19%), Query Frame = 0

Query: 40  LLHRNLTPLIHHFRHHGAAGRLSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDL 99
           LL + ++P  H    H    R+S  +    + +       +D +  SQ L T      + 
Sbjct: 2   LLLKQISPPFH---LHQLRRRISTIISAGFTLNLPKLEPSSDAELISQMLIT------NH 61

Query: 100 DPLP-ITKRLQVSFSHVKPNPVLVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISY 159
           +P   +   LQ++   + PN  L+  TL       +  L F ++L S P    T  + + 
Sbjct: 62  NPFHFMESSLQLNGISLTPN--LIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNL 121

Query: 160 FVDYFGRRKDFNAIHEVLVKGLGISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLK 219
            +D  GR + F+ + +++V+ +  +  +T    + R   AG   + +  F+        +
Sbjct: 122 IIDILGRVRQFDVVRQLIVE-MDQTSPETFLILVKRLIAAGLTRQAVRAFDDAPCFLENR 181

Query: 220 RDK-ESLRTVVEKLCENGYTSHAVKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRL 279
           R +      +++ LC+ GYT  AV +  +   EF  DE +   LI GWC   ++D A++ 
Sbjct: 182 RFRLVEFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKF 241

Query: 280 AGEMYRGGFELGTTAYNDLLD--CASKLRRKKDPF-RLHSEAEEILVEMDYRGVPRNVET 339
             EM   G E     YN LL+  C +     ++ F R    AE++  EM  RG+  +V +
Sbjct: 242 LVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTS 301

Query: 340 FNVLINNLCKIRKTTDALDLFHRMGEWGCHPNAETFIILTKSLYQAARTGEGDEMIDRMR 399
           F+++++   +  K    LD    M   G  P  ET+  + K L    R  E +E+++ M 
Sbjct: 302 FSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMV 361

Query: 400 SAGHGDALDKKTYYEFLNILCGIERIDHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNH 459
            +G   +    TY  F     G +  + A+ ++ KMK   C+P  +TY +L+G       
Sbjct: 362 ESGISPS--SATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGK 417

Query: 460 LDKANSLFNE 465
           ++    ++++
Sbjct: 422 METVKEIWDD 417

BLAST of CmoCh10G003090 vs. ExPASy Swiss-Prot
Match: P0C8R0 (Putative pentatricopeptide repeat-containing protein At5g43820 OS=Arabidopsis thaliana OX=3702 GN=At5g43820 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 7.7e-28
Identity = 102/415 (24.58%), Postives = 177/415 (42.65%), Query Frame = 0

Query: 70  SHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSH--VKPNPVLVLNTLN 129
           S S    S +N V   S   A + L+   L  L     +Q S S   +  +  +V + LN
Sbjct: 66  SVSKEDSSSKNQVAIDSFLSAEDKLRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLN 125

Query: 130 LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGLGISGA-- 189
             + +G  ++ F +W V  P       + S  +   GRRK F+ + +VL KG+   G   
Sbjct: 126 RGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVL-KGMVCEGVNP 185

Query: 190 --KTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHAVKI 249
             + L  ++D F R     + I  FE  E ++G+K   ES   ++  LCE  + S A  +
Sbjct: 186 DLECLTIAMDSFVRVHYVRRAIELFEESE-SFGVKCSTESFNALLRCLCERSHVSAAKSV 245

Query: 250 VKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCASKL 309
                     D    + +I GW   G+++E +++  EM   GF     +Y+ L++   + 
Sbjct: 246 FNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRT 305

Query: 310 RRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGEWGC 369
            R  D       + EI   + ++G   +   +N +I N    R   +++  + RM +  C
Sbjct: 306 GRIND-------SVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEEC 365

Query: 370 HPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERIDHA 429
            PN ET+  L   L +  +  +  E+ + M S G        T   FL  LC       A
Sbjct: 366 EPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT--SFLKPLCSYGPPHAA 425

Query: 430 LTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQ 479
           + +++K +K GC      Y+LL+  L          ++++E Q+ G P   + Y+
Sbjct: 426 MVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYE 469

BLAST of CmoCh10G003090 vs. ExPASy TrEMBL
Match: A0A6J1E592 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111430060 PE=4 SV=1)

HSP 1 Score: 1058.5 bits (2736), Expect = 9.0e-306
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0

Query: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR 60
           MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR
Sbjct: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR 60

Query: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV 120
           LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV
Sbjct: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180
           LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180

Query: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240
           GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA
Sbjct: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240

Query: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300
           VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA
Sbjct: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300

Query: 301 SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360
           SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE
Sbjct: 301 SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360

Query: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420
           WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI
Sbjct: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420

Query: 421 DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD
Sbjct: 421 DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 530
           PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF
Sbjct: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 529

BLAST of CmoCh10G003090 vs. ExPASy TrEMBL
Match: A0A6J1JII6 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111484763 PE=4 SV=1)

HSP 1 Score: 971.8 bits (2511), Expect = 1.1e-279
Identity = 489/513 (95.32%), Postives = 496/513 (96.69%), Query Frame = 0

Query: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR 60
           M PLPYLQLRRILIRSLASSSSLSAGSSSNFLN SARSFLLHRNLTPLIHHFRHHGAAGR
Sbjct: 1   MLPLPYLQLRRILIRSLASSSSLSAGSSSNFLNESARSFLLHRNLTPLIHHFRHHGAAGR 60

Query: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV 120
           LSYPLQLSLSHSFS+ESGENDVDQ+SQSLATELLKDPDL PLPITKRLQ+SFSHVKPNP 
Sbjct: 61  LSYPLQLSLSHSFSSESGENDVDQSSQSLATELLKDPDLVPLPITKRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180
           LVLNTLNLSSEAGRTVLGFN+WLVSNPDFHHTDETISYFVDYFGR KDFNAIHEVL KGL
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNDWLVSNPDFHHTDETISYFVDYFGRIKDFNAIHEVLAKGL 180

Query: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240
           GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLR VVEKLCENGY SHA
Sbjct: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGYASHA 240

Query: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300
           VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLA EMYRGGFELGTTAYNDLLDCA
Sbjct: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLASEMYRGGFELGTTAYNDLLDCA 300

Query: 301 SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360
            KL RKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360

Query: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420
           WGCHPN+ETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLN LCGIERI
Sbjct: 361 WGCHPNSETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNTLCGIERI 420

Query: 421 DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHALTVFEKMK+EGCEPGIKTYELLM NLCAHNHLDKANSLF EAQKRGVPV PKA QVD
Sbjct: 421 DHALTVFEKMKEEGCEPGIKTYELLMANLCAHNHLDKANSLFIEAQKRGVPV-PKACQVD 480

Query: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQI 514
           PGYVK PKVKN+EKKRETLPEKMARKRRRLKQI
Sbjct: 481 PGYVKMPKVKNVEKKRETLPEKMARKRRRLKQI 512

BLAST of CmoCh10G003090 vs. ExPASy TrEMBL
Match: A0A5A7UTF6 (Pentatricopeptide repeat-containing protein PNM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00020 PE=4 SV=1)

HSP 1 Score: 910.6 bits (2352), Expect = 3.0e-261
Identity = 455/529 (86.01%), Postives = 482/529 (91.12%), Query Frame = 0

Query: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR 60
           MPPLPYLQLR + +RSL+S       SS+N LN SAR+ LLHRNLT L HHFRHHGAA R
Sbjct: 1   MPPLPYLQLRSLFLRSLSS-------SSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60

Query: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV 120
            S PL LSLSHSFS+ESG NDVDQTSQSLA+ELLKDPD DPLPIT+RLQ+SFSHVKPNP 
Sbjct: 61  FSSPLYLSLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180
           LV NTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNA+HEVL KGL
Sbjct: 121 LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGL 180

Query: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240
           GI+G KTL SSI RFARAGRPTKLISFFETMEKNYGLKRDK+SLR VVEKL ENG+ SHA
Sbjct: 181 GINGPKTLESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHA 240

Query: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300
            K+VKDLANEFFPDEAICD+LIKGWCVN KLDEAKRLAGEMYRGGFELGTTAYN LLDC 
Sbjct: 241 EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360
            KL RKKDPFRLHSEAEEILVEMD RGVPRNVETFNVLINNLCKIR+TTDA++LFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGE 360

Query: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420
           WGCHPNAETF+IL +SLYQAARTGEGDEMIDRM+S G+GDALDKK YYEF+ ILCGIERI
Sbjct: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERI 420

Query: 421 DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHAL VF KMKK+GCEPGIKTY+LLMG LCAHN LDKANSLFNEAQKRGVPVTPKAYQVD
Sbjct: 421 DHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 530
           P Y+KKPKVK + KKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF
Sbjct: 481 PKYMKKPKVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

BLAST of CmoCh10G003090 vs. ExPASy TrEMBL
Match: A0A1S3BVC3 (pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494058 PE=4 SV=1)

HSP 1 Score: 910.6 bits (2352), Expect = 3.0e-261
Identity = 455/529 (86.01%), Postives = 482/529 (91.12%), Query Frame = 0

Query: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR 60
           MPPLPYLQLR + +RSL+S       SS+N LN SAR+ LLHRNLT L HHFRHHGAA R
Sbjct: 1   MPPLPYLQLRSLFLRSLSS-------SSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60

Query: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV 120
            S PL LSLSHSFS+ESG NDVDQTSQSLA+ELLKDPD DPLPIT+RLQ+SFSHVKPNP 
Sbjct: 61  FSSPLYLSLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180
           LV NTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNA+HEVL KGL
Sbjct: 121 LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGL 180

Query: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240
           GI+G KTL SSI RFARAGRPTKLISFFETMEKNYGLKRDK+SLR VVEKL ENG+ SHA
Sbjct: 181 GINGPKTLESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHA 240

Query: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300
            K+VKDLANEFFPDEAICD+LIKGWCVN KLDEAKRLAGEMYRGGFELGTTAYN LLDC 
Sbjct: 241 EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360
            KL RKKDPFRLHSEAEEILVEMD RGVPRNVETFNVLINNLCKIR+TTDA++LFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGE 360

Query: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420
           WGCHPNAETF+IL +SLYQAARTGEGDEMIDRM+S G+GDALDKK YYEF+ ILCGIERI
Sbjct: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERI 420

Query: 421 DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHAL VF KMKK+GCEPGIKTY+LLMG LCAHN LDKANSLFNEAQKRGVPVTPKAYQVD
Sbjct: 421 DHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 530
           P Y+KKPKVK + KKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF
Sbjct: 481 PKYMKKPKVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

BLAST of CmoCh10G003090 vs. ExPASy TrEMBL
Match: A0A6J1HLZ2 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111465769 PE=4 SV=1)

HSP 1 Score: 903.3 bits (2333), Expect = 4.9e-259
Identity = 451/529 (85.26%), Postives = 480/529 (90.74%), Query Frame = 0

Query: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR 60
           MPPLPYL LRR  IRSL+SSS LSA SSS+ LN +++S +L R+LT + HHFR  G A  
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60

Query: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV 120
            SY  QLSLSHSF +ESGENDVDQ+SQSLA ELLKDPDLDPLPITKRLQ+ FSHVKPNP 
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180
           L+LNTLN SSEAGRTVLGFNEWL+SNPDFHHTDETISYFVDYFGRRKDFN+IHEVL KG 
Sbjct: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240
           GISGAKTLRS+IDRFARAGRPTKL+SFFETMEKNYG KRDKES+R VVEKLCENGY SHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300
            K+VKDLA+EFFPDEAICD+LIKGWCVN KLDEAKRLAGEMYRGGFELGTTAYN LLDC 
Sbjct: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360
            KL RKKDPF+L SEAEEILVEMD RGVPRNVETFNVLINNLCKIRKTTDAL+LFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420
           WGCHPNAETF+IL KSLYQAARTGEGDEMIDRMRSAG+ DALDKK YYEFL ILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHAL VF KMKK+GCEPGIKTY+LLMG LCAHN LD+ANSLFNEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 530
           P Y KKPKVK +EKKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

BLAST of CmoCh10G003090 vs. NCBI nr
Match: XP_022921958.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1058.5 bits (2736), Expect = 1.9e-305
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0

Query: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR 60
           MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR
Sbjct: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR 60

Query: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV 120
           LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV
Sbjct: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180
           LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180

Query: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240
           GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA
Sbjct: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240

Query: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300
           VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA
Sbjct: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300

Query: 301 SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360
           SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE
Sbjct: 301 SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360

Query: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420
           WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI
Sbjct: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420

Query: 421 DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD
Sbjct: 421 DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 530
           PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF
Sbjct: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 529

BLAST of CmoCh10G003090 vs. NCBI nr
Match: KAG6589597.1 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023285.1 Pentatricopeptide repeat-containing protein PNM1, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1036.2 bits (2678), Expect = 9.9e-299
Identity = 517/529 (97.73%), Postives = 522/529 (98.68%), Query Frame = 0

Query: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR 60
           MPPLPYLQLRRILIRSLASSSSLSA SSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAG 
Sbjct: 1   MPPLPYLQLRRILIRSLASSSSLSASSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGM 60

Query: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV 120
           LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQ+SFSHVKPNP 
Sbjct: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180
           LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180

Query: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240
           GISGAKTLRSSIDRFAR GRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA
Sbjct: 181 GISGAKTLRSSIDRFARTGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240

Query: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300
           VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA
Sbjct: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300

Query: 301 SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360
            K+ RKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFH+MGE
Sbjct: 301 CKVCRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHQMGE 360

Query: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420
           WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI
Sbjct: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420

Query: 421 DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHALTVFEKMKKEGCEPGI TYELL+GNLCAHNHLDKANSLFNE+QKRGVPVTPKAYQVD
Sbjct: 421 DHALTVFEKMKKEGCEPGIMTYELLIGNLCAHNHLDKANSLFNESQKRGVPVTPKAYQVD 480

Query: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 530
           PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF
Sbjct: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 529

BLAST of CmoCh10G003090 vs. NCBI nr
Match: XP_023515592.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1020.4 bits (2637), Expect = 5.6e-294
Identity = 510/529 (96.41%), Postives = 522/529 (98.68%), Query Frame = 0

Query: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR 60
           MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLN SARSFLLHRNLTPLIHHFRHHGAAGR
Sbjct: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNRSARSFLLHRNLTPLIHHFRHHGAAGR 60

Query: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV 120
           LSYPLQLSLSHSFS+ES E+DVDQTSQSLATELLKDPDLDPLPITKRLQ+SFSHVKPNP 
Sbjct: 61  LSYPLQLSLSHSFSSESVEDDVDQTSQSLATELLKDPDLDPLPITKRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180
           LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAI+EVLVKGL
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIYEVLVKGL 180

Query: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240
           GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGL+RDKESLR VVEKLCENG+TSHA
Sbjct: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLRRDKESLRMVVEKLCENGFTSHA 240

Query: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300
           VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA
Sbjct: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300

Query: 301 SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360
            KL RKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDA++LFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGE 360

Query: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420
           WGC+PNAETFIILTKSLYQAARTGEGDEMIDRMRSAGH DALDKKTYYEFLNILCGIERI
Sbjct: 361 WGCNPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHDDALDKKTYYEFLNILCGIERI 420

Query: 421 DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHALTVFEKMKKEGCEPGIKTYELL+GNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD
Sbjct: 421 DHALTVFEKMKKEGCEPGIKTYELLIGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 530
           PGYVKKPKVKN+EKKR+TLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF
Sbjct: 481 PGYVKKPKVKNVEKKRDTLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 529

BLAST of CmoCh10G003090 vs. NCBI nr
Match: XP_022987113.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 971.8 bits (2511), Expect = 2.3e-279
Identity = 489/513 (95.32%), Postives = 496/513 (96.69%), Query Frame = 0

Query: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR 60
           M PLPYLQLRRILIRSLASSSSLSAGSSSNFLN SARSFLLHRNLTPLIHHFRHHGAAGR
Sbjct: 1   MLPLPYLQLRRILIRSLASSSSLSAGSSSNFLNESARSFLLHRNLTPLIHHFRHHGAAGR 60

Query: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV 120
           LSYPLQLSLSHSFS+ESGENDVDQ+SQSLATELLKDPDL PLPITKRLQ+SFSHVKPNP 
Sbjct: 61  LSYPLQLSLSHSFSSESGENDVDQSSQSLATELLKDPDLVPLPITKRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180
           LVLNTLNLSSEAGRTVLGFN+WLVSNPDFHHTDETISYFVDYFGR KDFNAIHEVL KGL
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNDWLVSNPDFHHTDETISYFVDYFGRIKDFNAIHEVLAKGL 180

Query: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240
           GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLR VVEKLCENGY SHA
Sbjct: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGYASHA 240

Query: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300
           VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLA EMYRGGFELGTTAYNDLLDCA
Sbjct: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLASEMYRGGFELGTTAYNDLLDCA 300

Query: 301 SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360
            KL RKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360

Query: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420
           WGCHPN+ETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLN LCGIERI
Sbjct: 361 WGCHPNSETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNTLCGIERI 420

Query: 421 DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHALTVFEKMK+EGCEPGIKTYELLM NLCAHNHLDKANSLF EAQKRGVPV PKA QVD
Sbjct: 421 DHALTVFEKMKEEGCEPGIKTYELLMANLCAHNHLDKANSLFIEAQKRGVPV-PKACQVD 480

Query: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQI 514
           PGYVK PKVKN+EKKRETLPEKMARKRRRLKQI
Sbjct: 481 PGYVKMPKVKNVEKKRETLPEKMARKRRRLKQI 512

BLAST of CmoCh10G003090 vs. NCBI nr
Match: XP_038880042.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial [Benincasa hispida])

HSP 1 Score: 923.3 bits (2385), Expect = 9.4e-265
Identity = 461/529 (87.15%), Postives = 486/529 (91.87%), Query Frame = 0

Query: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR 60
           MPPLPYLQLR + IRSL+S SS S       LN  +R+ LLHRNLT L HHFRHH AA R
Sbjct: 1   MPPLPYLQLRTLFIRSLSSPSSTS-------LNDCSRNVLLHRNLTSLFHHFRHHEAALR 60

Query: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV 120
            S PL LSLSHSF +ESG+ND+DQTSQSLA+ELLKDPDLDPLPIT+RLQ+SFSHVKPNP 
Sbjct: 61  YSSPLYLSLSHSFFSESGDNDLDQTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180
           LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYF+DYFGRRKDFNA+HEVL KGL
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFIDYFGRRKDFNAVHEVLAKGL 180

Query: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240
           GISGAKTLRSSIDRFARAGR TKLISFFETMEKNYGLKRDKESLR VVEKLCENG+ SHA
Sbjct: 181 GISGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRLVVEKLCENGFASHA 240

Query: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300
            K+VKDLANEFFPDEAICD+L+KGWCV+GKLDEAKRLAGEMYRGGFELGTTAYN LLDC 
Sbjct: 241 EKMVKDLANEFFPDEAICDTLVKGWCVDGKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360
            KL RKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKT+DA++LFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGE 360

Query: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420
           WGCHPNAETF+IL KSLYQAARTGEGDEMIDRMRSAG+GDALDKK YYEFL ILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420

Query: 421 DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHAL VF KMKK+GCEPGIKTY+LLMG LCAHN LDKANSLFNEAQKRGVPVTPKAYQVD
Sbjct: 421 DHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 530
           P YVKKPKV  +EKKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PRYVKKPKVNKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 522

BLAST of CmoCh10G003090 vs. TAIR 10
Match: AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 604.4 bits (1557), Expect = 9.0e-173
Identity = 311/531 (58.57%), Postives = 392/531 (73.82%), Query Frame = 0

Query: 1   MPP-LPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAG 60
           MPP LP LQLRR+L+RS  SSSS++   S   +  S           PL        ++ 
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQPRIISS----------KPLFSPLPPSRSSI 60

Query: 61  RLSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNP 120
             ++P +   S   + ES   D ++ + S + EL  +PD +   I++R  +SFSH+ PNP
Sbjct: 61  FSTFPSRF-FSSETNAESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPNP 120

Query: 121 VLVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKG 180
            L+L TLNLS EAGR  LGFNEWL SN +F HTDET+S+FVDYFGRRKDF  + E++ K 
Sbjct: 121 DLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKY 180

Query: 181 LGISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSH 240
            GI+G KTL S+IDR  RAGRP ++  FFE ME +YGLKRDKESL  VV+KLCE G+ S 
Sbjct: 181 KGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASI 240

Query: 241 AVKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDC 300
           A K+VK+ ANE FPDE ICD LI GWC+  KLDEA RLAGEM RGGFE+GT AYN +LDC
Sbjct: 241 AEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDC 300

Query: 301 ASKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMG 360
             KL RKKDPF+L  E E++L+EM++RGVPRN ETFNVLINNLCKIR+T +A+ LF RMG
Sbjct: 301 VCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMG 360

Query: 361 EWGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIER 420
           EWGC P+AET+++L +SLYQAAR GEGDEMID+M+SAG+G+ L+KK YY FL ILCGIER
Sbjct: 361 EWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIER 420

Query: 421 IDHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQV 480
           ++HA++VF+ MK  GC+PGIKTY+LLMG +CA+N L +AN L+ EA K+G+ V+PK Y+V
Sbjct: 421 LEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRV 480

Query: 481 DPGYVKKPKVKNLE---KKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRR 528
           DP ++KK K K ++   KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 DPRFMKK-KTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

BLAST of CmoCh10G003090 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 1.1e-34
Identity = 96/369 (26.02%), Postives = 167/369 (45.26%), Query Frame = 0

Query: 108 LQVSFSHVKPNPVLVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRK 167
           L ++ S +   P L++  L+   +AG     F  W    P + H+ E     V    + +
Sbjct: 86  LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145

Query: 168 DFNAIHEVLVKGLGISGAKTLRSSI-----DRFARAGRPTKLISFFETMEKNYGLKRDKE 227
            F A+   L++ +  +  + +   +      RFA A    K +   + M K YGL+ D+ 
Sbjct: 146 QFGAVWG-LIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEY 205

Query: 228 SLRTVVEKLCENGYTSHAVKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMY 287
               +++ LC+NG    A K+ +D+  +F P+     SL+ GWC  GKL EAK +  +M 
Sbjct: 206 VFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMK 265

Query: 288 RGGFELGTTAYNDLLDCASKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNL 347
             G E     + +LL   +   +  D       A +++ +M  RG   NV  + VLI  L
Sbjct: 266 EAGLEPDIVVFTNLLSGYAHAGKMAD-------AYDLMNDMRKRGFEPNVNCYTVLIQAL 325

Query: 348 CKIRKTTD-ALDLFHRMGEWGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDA 407
           C+  K  D A+ +F  M  +GC  +  T+  L     +     +G  ++D MR  G   +
Sbjct: 326 CRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS 385

Query: 408 LDKKTYYEFLNILCGIERIDHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSL 467
             + TY + +      E+ +  L + EKMK+ GC P +  Y +++   C    + +A  L
Sbjct: 386 --QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRL 443

Query: 468 FNEAQKRGV 471
           +NE +  G+
Sbjct: 446 WNEMEANGL 443

BLAST of CmoCh10G003090 vs. TAIR 10
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 3.7e-33
Identity = 95/417 (22.78%), Postives = 192/417 (46.04%), Query Frame = 0

Query: 115 VKPNPVLVLNTLN--LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAI 174
           V P+  LV   +    +  + R +L F  W   +      D+  +Y +     +KD  A+
Sbjct: 63  VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122

Query: 175 HEVLV---KGLGISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVE 234
             +L    K       +T     +   + G+    I  F+ ++K +   +D  ++  ++ 
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIIS 182

Query: 235 KLCENGYTSHAVKIVKDLANEFFPDE-AICDSLIKGWCVNGKLDEAKRLAGEMYRGGFEL 294
            LC  G+   A+ ++    +    +E ++  SL+ GW V   + EA+R+  +M   G   
Sbjct: 183 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 242

Query: 295 GTTAYNDLLDCASKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKT 354
               +N LL C  +    ++P  L  EA  I++EM    +     ++N+L++ L + R+ 
Sbjct: 243 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 302

Query: 355 TDALDLFHRMGEWGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYY 414
            ++  +  +M   GC P+  ++  + + LY   R G+G++++D M   G     ++K YY
Sbjct: 303 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP--ERKFYY 362

Query: 415 EFLNILCGIERIDHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKR 474
           + + +LCG+ER++ AL +FEKMK+       + Y+LL+  LC   + +K   L+ EA   
Sbjct: 363 DLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSI 422

Query: 475 GVPVTPKAYQVDPGYVKKPKVKNLEKKRETLPEKMARKR--RRLKQIRLSFVKKPKK 524
            V ++     +DP   +  K   ++++   +  +    +   R+ + +     KPK+
Sbjct: 423 DVTLSCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKR 476

BLAST of CmoCh10G003090 vs. TAIR 10
Match: AT5G43820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 5.5e-29
Identity = 102/415 (24.58%), Postives = 177/415 (42.65%), Query Frame = 0

Query: 70  SHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSH--VKPNPVLVLNTLN 129
           S S    S +N V   S   A + L+   L  L     +Q S S   +  +  +V + LN
Sbjct: 66  SVSKEDSSSKNQVAIDSFLSAEDKLRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLN 125

Query: 130 LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGLGISGA-- 189
             + +G  ++ F +W V  P       + S  +   GRRK F+ + +VL KG+   G   
Sbjct: 126 RGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVL-KGMVCEGVNP 185

Query: 190 --KTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHAVKI 249
             + L  ++D F R     + I  FE  E ++G+K   ES   ++  LCE  + S A  +
Sbjct: 186 DLECLTIAMDSFVRVHYVRRAIELFEESE-SFGVKCSTESFNALLRCLCERSHVSAAKSV 245

Query: 250 VKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCASKL 309
                     D    + +I GW   G+++E +++  EM   GF     +Y+ L++   + 
Sbjct: 246 FNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRT 305

Query: 310 RRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGEWGC 369
            R  D       + EI   + ++G   +   +N +I N    R   +++  + RM +  C
Sbjct: 306 GRIND-------SVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEEC 365

Query: 370 HPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERIDHA 429
            PN ET+  L   L +  +  +  E+ + M S G        T   FL  LC       A
Sbjct: 366 EPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT--SFLKPLCSYGPPHAA 425

Query: 430 LTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQ 479
           + +++K +K GC      Y+LL+  L          ++++E Q+ G P   + Y+
Sbjct: 426 MVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYE 469

BLAST of CmoCh10G003090 vs. TAIR 10
Match: AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-28
Identity = 90/331 (27.19%), Postives = 141/331 (42.60%), Query Frame = 0

Query: 144 VSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGLGIS---GAKTLRSSIDRFARAGR 203
           + N    H   T S  ++ F RR   +    VL K + +       TL S ++ F    R
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166

Query: 204 PTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHAVKIV-KDLANEFFPDEAICD 263
            +  +S    M +  G + D  +  T++  L  +   S AV +V + +     PD     
Sbjct: 167 ISDAVSLVGQMVE-MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 226

Query: 264 SLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCASKLRRKKDPFRLHSEAEEI 323
            ++ G C  G +D A  L  +M +G  E G   YN ++D     +   D       A  +
Sbjct: 227 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND-------ALNL 286

Query: 324 LVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGEWGCHPNAETFIILTKSLYQ 383
             EMD +G+  NV T+N LI  LC   + +DA  L   M E   +PN  TF  L  +  +
Sbjct: 287 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 346

Query: 384 AARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERIDHALTVFEKMKKEGCEPGI 443
             +  E +++ D M         D  TY   +N  C  +R+D A  +FE M  + C P +
Sbjct: 347 EGKLVEAEKLYDEMIKRSIDP--DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 406

Query: 444 KTYELLMGNLCAHNHLDKANSLFNEAQKRGV 471
            TY  L+   C    +D+   LF E  +RG+
Sbjct: 407 VTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FME41.3e-17158.57Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t... [more]
P0C8A01.6e-3326.02Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX... [more]
Q9FLJ65.2e-3222.78Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop... [more]
Q0WP851.6e-2823.95Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidop... [more]
P0C8R07.7e-2824.58Putative pentatricopeptide repeat-containing protein At5g43820 OS=Arabidopsis th... [more]
Match NameE-valueIdentityDescription
A0A6J1E5929.0e-306100.00pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbit... [more]
A0A6J1JII61.1e-27995.32pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbit... [more]
A0A5A7UTF63.0e-26186.01Pentatricopeptide repeat-containing protein PNM1 OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3BVC33.0e-26186.01pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Cucumis melo ... [more]
A0A6J1HLZ24.9e-25985.26pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
XP_022921958.11.9e-305100.00pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ... [more]
KAG6589597.19.9e-29997.73Pentatricopeptide repeat-containing protein PNM1, mitochondrial, partial [Cucurb... [more]
XP_023515592.15.6e-29496.41pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ... [more]
XP_022987113.12.3e-27995.32pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ... [more]
XP_038880042.19.4e-26587.15pentatricopeptide repeat-containing protein PNM1, mitochondrial [Benincasa hispi... [more]
Match NameE-valueIdentityDescription
AT5G60960.19.0e-17358.57Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G49730.11.1e-3426.02Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G61370.13.7e-3322.78Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G43820.15.5e-2924.58Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G63130.11.2e-2827.19Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 489..509
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 60..528
NoneNo IPR availablePANTHERPTHR47932:SF13PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PNM1, MITOCHONDRIALcoord: 60..528
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 334..367
e-value: 6.7E-9
score: 33.4
coord: 257..288
e-value: 0.0021
score: 16.1
coord: 406..438
e-value: 2.4E-5
score: 22.2
coord: 441..472
e-value: 0.001
score: 17.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 260..285
e-value: 0.01
score: 16.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 331..377
e-value: 1.5E-11
score: 44.3
coord: 406..450
e-value: 8.7E-8
score: 32.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 331..365
score: 12.057487
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 438..472
score: 8.944478
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 254..288
score: 10.172144
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 403..437
score: 10.764054
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 398..522
e-value: 6.1E-13
score: 50.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 145..283
e-value: 2.9E-12
score: 48.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 284..397
e-value: 6.0E-17
score: 63.8

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G003090.1CmoCh10G003090.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding