CmoCh10G002910 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G002910
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	suppressor of phytochrome b 5
Location	Cmo_Chr10: 1291459 .. 1296434 (+)
RNA-Seq Expression	CmoCh10G002910
Synteny	CmoCh10G002910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGAACTCTCCCATCCCATATATCTTTGGAGGTTTCGCCATTGTTTTTGGAATCACTTCTGCTGTTCTTTTTTTCCTTGCTTGCTCTCACCAAATGCAGATGCGAAATTCTCCTATCAACGACGACAAAGAAAAACCAAGCAAGAACACAGGAAACGAGCAGTTTGATACTACTCCAAATATAGCCGTAATCATGGCTGGGGATGATCATCCCAGGTACATGGCAAAGCCTGTCTCTTTTGTTGGGAATTAGTGAGTTGATGAGCGTTGAAGAAAGAAAAGTAGAAACTGTTTGGTTATAGTGAGATTCATAGAGAAATGTATGGAAAGTAGTGTCATAAAGAAGTGAGATAAATTTTCAACTACTTGACCTAAGAACTGAGCTCTTACTACAAGAAACTTTCTTCAGTTTTGTTGTACTAATCTATTTCTGATTAAAAAAAAAAAGTGATCTTCTTTAGGATTAGTTCATCTCTTACTCGAAAATTAAGTCCCATAGACCTGAAATCAGATGGCAACCGTAGTTTACAGAGAAACATACTACATGCTCATGAGAACCCAGAAGGTAACTTGTGTCAGACAAACTAGTAAGTGCAGGGGCCAAGTGGCCTTTGCAAGGTCCTCCCATCCCTAGAAGCAGATATCTAGGCAGCAGTAGCGACCCAAGCCAGCACGACTATAAATTCAAACGGGGTGGGGATTGTGTGTGTGTGTGTGTGGTTGGGGGAGAAAGAGAAAGGGAGAGGGAACTTACAATCCTCTGCAAAACCCATCACCTCTAGACTTGGTTTCCCCTTGAGGAGGTACAATTGGAGGGTATGGCTGATATTGACCATGTTGCATTGGATCACACACAGGTGGGGCAACGGCTGGTCCAGTATCTTTAAAAGTATACTACGGACAATAAATTCAGAACAAACTTTCCTACAATAATTGGTATCTTCCCTTTTTTCTTCCTTCAAAGATAACTACTGTAAACAAGAATAAGTAGAGATGAAGAGTTGAAAAGTTACCCATTGCTTGTCTGAAAATCAAATTCATCTGGCATGAATAGTTCTTTACTTTAAGTGGATTTCTATCCTTTGAGCATCTTATCTTGCAAAAGCAGCTACAACTAATGAACAATCATTGGAGGTTGAATGTGCATTGAATTATGCAGGACATAGAACAGGGTGAGGATTCAAGTTGTTCACTTTTGCATATAAAAACTACGATTGCTTATGAAGTGGTTGCTTTGCATTGTGAATTTCTACATCTACTGACAGAAGGATACAATGTGAGCAGTTGTTTGTGAGGAAAGAAAATAGGCAGTTGTGCAGCAAGACACCACCAAACTTAACTCCAACTGCATAACAACAAGCTACATTCGGAATACTGCTGCCTCAAGGAGAATATGTGTGAGGAGCGATACGAACATCGACACGTCTTTAGGGGAAATCCCGATTTTCACCTCGGCAATGGTACCACCCATAGCCTTAAATATGTCTAGTTGATATATTTGTAGTGTTTTGTTCAGATTTATGGCATATATTATAAACTTGTTTGTGGAGTAGTACGTTTATAGAGATGGGAATAGGGCAAATCTATGAGCAGGAAGGACAGGTTTGAATTTAGGTCTATTCTTGTACATGCCTATGTTGAATAATCCAAGCCCTTTAGAATAAATTAAGTAGCCACTCTCCGTATAAGAATGGATTGTATCCAAGAAAACACAAGGGTAGGGGGTTGGGAACTACTTAGAACTATGAGCTAGTTCGGTGAAAAATGACAGAACAGACATATTTGGAGAGACATAAGATCATAGTTAAAGATACAATTGTTGGCCATGAGCTTTTAAAAAGTAACTATTGGCCCAAAGAGAACATTATTATAATGAATATCCAAAGATTTGGACAACTTTGAATTGTCTTTTTCAGTTCTTCAACTGCAGCCATTAAGGGCAGAAAGTTCCAACTTGCATGTGGTGCTAAGCTACTATTATAAGGTACGGCTTGTATATTCATTAACAAAATACTAAAAATGGGCCTTCTCAGGTACACTATTTGTTTCCCCTCCTCTCTCTGTACTCACAGAAAAAGATGAAGTAAAAAGGGAAAAAGAAAAGTTCCTGTTCATTATAATTTAAAACAGCTTGAGTTCTGAACACTTCTCTGTTATATTTGAACTGAGATTTTCCTTGCGTTACGTGAATTTTTAGCCATATTTTAGTATTAGAAAAGAAAAACTTGGTAAAGATGACATGAAGATATAAAGGGGGAGTAAATGTCGAGCTTTCGAAAAAAAATGAATGGGGCTCCCGTAATGTGCCAGCGATATGAAGATAATAACACCAGGCGGTGTGCCAGCTAGGACACTGGGCTCCGAAAGGGGATGGATTGTGAGATCACACATCGATTGGAGAGATGAACGAGTGCAAGTGAGGACAATGGGTCTCGAAAGGGGGGTGGATTGTGAGATCCCACATCAATTGGAGAAGAGAATGAAACATTGTTTATAAAGGTGTGGAAACCTCTCCCTAGCAGACTCATTTTGAGAGAAAACCAGAAACGGAAAGTCCAAAAAGGACAATATCTACCCGCGGTGGGATTGGGTTGGGTTGTTACACGAATAGTGTTTGACGACATTGTGTTGATTACATAACCATATCTTGGATTCTCACGTGGAGGCTGTGTGCGAAGGGCAAGGTGCAAAAAAGGACAAACACCAAGAATGATACATGGGCCAAACACTGTCTAGTGAGTCTGCATAACAAGTCATGGTGAAAGGGGAAGAGAGTGGGGAACAACTAAGCCATGTTTACGAGTGAGGGGGGCAAGGGATGGCCAAACCATCTGGATTTTTGAACTCTTAACTTTGTTTTGTTCCTGTCCTTCCTATCAATGAGGTCCCCATTAATAGGACTACTCACTTACCTCAGCCAAATGATGTGCAACAAAAAACCAGCTATTCTTTTGTCTAAACTCCAAAACTTCAAACGGACCCTTGAATGCAACATTTGAGTTGTTTTTGTTGGTTTAATCTTGAAAACCAACCAAGTTTTCTCTGATACAACACAAGAAAATGATACCCATTTGTTCATGTTTATTGATTCTTTACATTCTTTTCACATGGAAGAGAGAGAGAGAGAGGAAAGCATGAAAAAAGAAAACTGGTCATTTCAAGAGTGAATGCAGAAGTAAATTATGGGAGCTGTCTGTCTGATAACAGTTATTTCACTTATGAACACTGTTTCAGAAGGAAGTAGCAACAATAGCAAAAGGACATTTGCTTCCTTTCCAGTTCATTTCATTAAAGCTTTAATTAATCCTTGAAACTAGAAATGACATTTTCCAAGGAGCTGGATTGCCAATTGGGCTATGGCACACCCATTTTTATGGAACCAAATAATTGAGCTGAAAAAAAAAAAAAACACAACCAAACAAACAAACAAACAGGAAAACAGCCACGTTCATCAACCTGAAACATGAGTCACAATCCTGCTTTCTGAGGCCCTGAACCTGCAAATACAAAGAAGACAGAAAAACCAAAAAAAACAGGCAGATTTTTCTTTTCTCTTCTTTTTCTTTCTTGTATGTGACAAATTTTCTGAGTTGTTTGCTCTGTAAACCTAACTCCTTGTTGGGTTTGTTGCATTTTGTTCTTCCTCAGGGTGAAAATACATTAAACAGGAAAAGAAAACAAATGGAAGAACCAAAAGACAGAAAGGAATAAGAATTCTGAAGGTGAGATAGGTAATGTAAGGGTTATGCAGATGTCCATTTCCATGCTATTTAAGAACATGAGTCTTATATTCTCTCTAGTTTTGTAGGGCTGAGCTAACCCATCTCTCTGCATTTAAAGCTACCTCTTCTAATAATGACAGAATGCAGAGAAGAGTTAAGATGATTGCCATCTTCTGTGATGAACCAACCCCCCCATGTCCTTTCAAATTCAAGAAACTTTAGCATGTTTGTATATCTTTTGCAATTGGAAGGATTTCTCTTTCATGGACACCTTCTAGCTGTCTTCTGCTCAGTGAAAAAGTCAGAGAATTTATTTGCCTTTGGATTTCCAGGTGGTGCAGTGAGGGTTTTTATCTCTACCCACTAAGAACTTGTGTGTTTTTTTTCATGTTTTTTTAAAAAAATTGGGCTTTGTAGCTTTCATATAATTAGAGAAGCCTGTTTGGTCAGAGAGGTAGCAAAAGGGTATGAATGGTTTCCTCAGGTGTCTAAATTCAGCCTTCCCCAATTCTGTTCTTGTTCTTGTTCTTGTTCTGTGTGTTTCTTAAACTCCTCGAATTGCTTGTGTCCAGTTATGGAGCCATCCCAAATGTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCCCCTGCAGCTGCTGATGGTTCCAGTGATGTTGATACTGGTGCAGCTTCTGATGAAGAAGAAGATGAAGAACACAAAGGCTATTATGATATTAACCAAGATGACAGCGATGACTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAAGACGCCACCCATTTGGAGGGATGAAGAATCCCCCCCATGCTTTGCTGCCTCTCTTCACCCACCAGAACAAGCCAAACTCTTGCTTCGAAACCAAACCCAAACCCAAGCCCAAACCCAAGAAGCCATTAAAGAAGAAGCAAAGAGCTGAAAGAAAAGAAGTGAAAGAGCCAAAGAGCTCAGTTCAGAGCAGCTCCAAGGCAAGAAAGTGCATCTGGATGGGTAAAAGAAACTAAGGGGAAGAAGCTCAGTTCTTCTCTTCATTGGGTATTTCATTTATGTTTGTTCCTATGTTTTCCTCTACTTATGTTCTGTGGTTCCTGTTCTTTTTGTGTAACAAGCAGCCATTTATTTACAACAATCCAGACAAACAAACTACAGTGATCCATATGAGCTTCACATTAGCCATTAATGGATGTTTTTCCTTACAGAAACCGAGCTTCTAAAGAAC

mRNA sequence

AGGGAACTCTCCCATCCCATATATCTTTGGAGGTTTCGCCATTGTTTTTGGAATCACTTCTGCTGTTCTTTTTTTCCTTGCTTGCTCTCACCAAATGCAGATGCGAAATTCTCCTATCAACGACGACAAAGAAAAACCAAGCAAGAACACAGGAAACGAGCAGTTTGATACTACTCCAAATATAGCCGTAATCATGGCTGGGGATGATCATCCCAGGATTAGTTCATCTCTTACTCGAAAATTAAGTCCCATAGACCTGAAATCAGATGGCAACCGTAGTTTACAGAGAAACATACTACATGCTCATGAGAACCCAGAAGTTATGGAGCCATCCCAAATGTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCCCCTGCAGCTGCTGATGGTTCCAGTGATGTTGATACTGGTGCAGCTTCTGATGAAGAAGAAGATGAAGAACACAAAGGCTATTATGATATTAACCAAGATGACAGCGATGACTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAAGACGCCACCCATTTGGAGGGATGAAGAATCCCCCCCATGCTTTGCTGCCTCTCTTCACCCACCAGAACAAGCCAAACTCTTGCTTCGAAACCAAACCCAAACCCAAGCCCAAACCCAAGAAGCCATTAAAGAAGAAGCAAAGAGCTGAAAGAAAAGAAGTGAAAGAGCCAAAGAGCTCAGTTCAGAGCAGCTCCAAGGCAAGAAAGTGCATCTGGATGGGTAAAAGAAACTAAGGGGAAGAAGCTCAGTTCTTCTCTTCATTGGGTATTTCATTTATGTTTGTTCCTATGTTTTCCTCTACTTATGTTCTGTGGTTCCTGTTCTTTTTGTGTAACAAGCAGCCATTTATTTACAACAATCCAGACAAACAAACTACAGTGATCCATATGAGCTTCACATTAGCCATTAATGGATGTTTTTCCTTACAGAAACCGAGCTTCTAAAGAAC

Coding sequence (CDS)

ATGCAGATGCGAAATTCTCCTATCAACGACGACAAAGAAAAACCAAGCAAGAACACAGGAAACGAGCAGTTTGATACTACTCCAAATATAGCCGTAATCATGGCTGGGGATGATCATCCCAGGATTAGTTCATCTCTTACTCGAAAATTAAGTCCCATAGACCTGAAATCAGATGGCAACCGTAGTTTACAGAGAAACATACTACATGCTCATGAGAACCCAGAAGTTATGGAGCCATCCCAAATGTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCCCCTGCAGCTGCTGATGGTTCCAGTGATGTTGATACTGGTGCAGCTTCTGATGAAGAAGAAGATGAAGAACACAAAGGCTATTATGATATTAACCAAGATGACAGCGATGACTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAAGACGCCACCCATTTGGAGGGATGAAGAATCCCCCCCATGCTTTGCTGCCTCTCTTCACCCACCAGAACAAGCCAAACTCTTGCTTCGAAACCAAACCCAAACCCAAGCCCAAACCCAAGAAGCCATTAAAGAAGAAGCAAAGAGCTGAAAGAAAAGAAGTGAAAGAGCCAAAGAGCTCAGTTCAGAGCAGCTCCAAGGCAAGAAAGTGCATCTGGATGGGTAAAAGAAACTAA

Protein sequence

MQMRNSPINDDKEKPSKNTGNEQFDTTPNIAVIMAGDDHPRISSSLTRKLSPIDLKSDGNRSLQRNILHAHENPEVMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN

Homology

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BLAST of CmoCh10G002910 vs. ExPASy Swiss-Prot
Match: Q9FKQ9 (Protein SOB FIVE-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=SOFL4 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.1e-05
Identity = 36/78 (46.15%), Postives = 42/78 (53.85%), Query Frame = 0


Query: 87  EECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDIN-----------QD 146
           EEC SSESGWT Y+ SP   D    VD        ED  ++GY   N             
Sbjct: 4   EECSSSESGWTTYLSSPIKVDEDEVVD--------EDYYYEGYNIYNYSSKVEHEEERNK 63

Query: 147 DSDDSMASDASSGPSHQQ 154
           DSDDSMASDASSGP++Q+
Sbjct: 64  DSDDSMASDASSGPNYQR 73

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BLAST of CmoCh10G002910 vs. ExPASy Swiss-Prot
Match: Q9LEZ1 (Protein SUPPRESSOR OF PHYTOCHROME B 5 OS=Arabidopsis thaliana OX=3702 GN=SOB5 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.4e-04
Identity = 32/73 (43.84%), Postives = 40/73 (54.79%), Query Frame = 0


Query: 77  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDD 136
           ME + +FG  E+C S ESGWTMY+   A+     D D     D+EE+E+          D
Sbjct: 1   MESANIFGSDEDCRSCESGWTMYL---ASQSHDRDDDCYYGDDDEEEED---------SD 60

Query: 137 SDDSMASDASSGP 150
             DSM SDASSGP
Sbjct: 61  GGDSMDSDASSGP 61

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BLAST of CmoCh10G002910 vs. ExPASy TrEMBL
Match: A0A6J1E405 (uncharacterized protein LOC111429737 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429737 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.8e-78
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 76  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD 135
           VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD
Sbjct: 23  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD 82

Query: 136 DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP 195
           DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP
Sbjct: 83  DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP 142

Query: 196 LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 231
           LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
Sbjct: 143 LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 177

[Close]

BLAST of CmoCh10G002910 vs. ExPASy TrEMBL
Match: A0A6J1E0K6 (uncharacterized protein LOC111429737 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429737 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.8e-78
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 76  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD 135
           VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD
Sbjct: 5   VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD 64

Query: 136 DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP 195
           DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP
Sbjct: 65  DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP 124

Query: 196 LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 231
           LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
Sbjct: 125 LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 159

[Close]

BLAST of CmoCh10G002910 vs. ExPASy TrEMBL
Match: A0A6J1E0K4 (uncharacterized protein LOC111429737 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111429737 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.1e-77
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 77  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDD 136
           MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDD
Sbjct: 1   MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDD 60

Query: 137 SDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKPL 196
           SDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKPL
Sbjct: 61  SDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKPL 120

Query: 197 KKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 231
           KKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
Sbjct: 121 KKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 154

[Close]

BLAST of CmoCh10G002910 vs. ExPASy TrEMBL
Match: A0A6J1JKS2 (uncharacterized protein LOC111485335 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485335 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.5e-71
Identity = 149/155 (96.13%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 76  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD 135
           VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASD EEDEEHKGYYDINQD
Sbjct: 23  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASD-EEDEEHKGYYDINQD 82

Query: 136 DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP 195
           DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSC ET  KPKPKPKKP
Sbjct: 83  DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCLET--KPKPKPKKP 142

Query: 196 LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 231
           LKKKQRAERKEVKEPKSSVQSSSKARK IWMGKR+
Sbjct: 143 LKKKQRAERKEVKEPKSSVQSSSKARKSIWMGKRS 174

[Close]

BLAST of CmoCh10G002910 vs. ExPASy TrEMBL
Match: A0A6J1JFR5 (uncharacterized protein LOC111485335 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485335 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.5e-71
Identity = 149/155 (96.13%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 76  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD 135
           VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASD EEDEEHKGYYDINQD
Sbjct: 5   VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASD-EEDEEHKGYYDINQD 64

Query: 136 DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP 195
           DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSC ET  KPKPKPKKP
Sbjct: 65  DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCLET--KPKPKPKKP 124

Query: 196 LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 231
           LKKKQRAERKEVKEPKSSVQSSSKARK IWMGKR+
Sbjct: 125 LKKKQRAERKEVKEPKSSVQSSSKARKSIWMGKRS 156

[Close]

BLAST of CmoCh10G002910 vs. NCBI nr
Match: XP_022921472.1 (uncharacterized protein LOC111429737 isoform X1 [Cucurbita moschata] >XP_022921473.1 uncharacterized protein LOC111429737 isoform X1 [Cucurbita moschata])

HSP 1 Score: 301.6 bits (771), Expect = 5.8e-78
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 76  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD 135
           VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD
Sbjct: 23  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD 82

Query: 136 DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP 195
           DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP
Sbjct: 83  DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP 142

Query: 196 LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 231
           LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
Sbjct: 143 LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 177

[Close]

BLAST of CmoCh10G002910 vs. NCBI nr
Match: XP_022921474.1 (uncharacterized protein LOC111429737 isoform X2 [Cucurbita moschata])

HSP 1 Score: 301.6 bits (771), Expect = 5.8e-78
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 76  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD 135
           VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD
Sbjct: 5   VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQD 64

Query: 136 DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP 195
           DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP
Sbjct: 65  DSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKP 124

Query: 196 LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 231
           LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
Sbjct: 125 LKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 159

[Close]

BLAST of CmoCh10G002910 vs. NCBI nr
Match: XP_022921475.1 (uncharacterized protein LOC111429737 isoform X3 [Cucurbita moschata] >XP_022921476.1 uncharacterized protein LOC111429737 isoform X3 [Cucurbita moschata] >XP_022921477.1 uncharacterized protein LOC111429737 isoform X3 [Cucurbita moschata])

HSP 1 Score: 299.7 bits (766), Expect = 2.2e-77
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 77  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDD 136
           MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDD
Sbjct: 1   MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDD 60

Query: 137 SDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKPL 196
           SDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKPL
Sbjct: 61  SDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKPL 120

Query: 197 KKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 231
           KKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
Sbjct: 121 KKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 154

[Close]

BLAST of CmoCh10G002910 vs. NCBI nr
Match: KAG6589579.1 (hypothetical protein SDJN03_15002, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023268.1 hypothetical protein SDJN02_14293, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.8 bits (730), Expect = 3.3e-73
Identity = 150/154 (97.40%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 77  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDD 136
           MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDD
Sbjct: 1   MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDD 60

Query: 137 SDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKPL 196
           SDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCF+T  KPKPKPKKPL
Sbjct: 61  SDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFQT--KPKPKPKKPL 120

Query: 197 KKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 231
           KKKQRAERKEVKEPKSSVQSSSKARK IWMGKRN
Sbjct: 121 KKKQRAERKEVKEPKSSVQSSSKARKSIWMGKRN 152

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BLAST of CmoCh10G002910 vs. NCBI nr
Match: XP_023516938.1 (uncharacterized protein LOC111780698 [Cucurbita pepo subsp. pepo] >XP_023516939.1 uncharacterized protein LOC111780698 [Cucurbita pepo subsp. pepo] >XP_023516941.1 uncharacterized protein LOC111780698 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.6 bits (714), Expect = 2.4e-71
Identity = 150/156 (96.15%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 77  MEPSQMFGVSEECHSSESGWTMYIGSP--AAADGSSDVDTGAASDEEEDEEHKGYYDINQ 136
           MEPSQMFGVSEECHSSESGWTMYIGSP  AAADGSSDVDTGAASDEEEDEEHKGYYDINQ
Sbjct: 1   MEPSQMFGVSEECHSSESGWTMYIGSPAAAAADGSSDVDTGAASDEEEDEEHKGYYDINQ 60

Query: 137 DDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKK 196
           DDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSC ET  KPKPKPKK
Sbjct: 61  DDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCLET--KPKPKPKK 120

Query: 197 PLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN 231
           PLKKKQRAERKEVKEPKSSVQSSSKARK IWMGKRN
Sbjct: 121 PLKKKQRAERKEVKEPKSSVQSSSKARKSIWMGKRN 154

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BLAST of CmoCh10G002910 vs. TAIR 10
Match: AT5G38790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G30580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 2.2e-06
Identity = 36/78 (46.15%), Postives = 42/78 (53.85%), Query Frame = 0


Query: 87  EECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDIN-----------QD 146
           EEC SSESGWT Y+ SP   D    VD        ED  ++GY   N             
Sbjct: 4   EECSSSESGWTTYLSSPIKVDEDEVVD--------EDYYYEGYNIYNYSSKVEHEEERNK 63

Query: 147 DSDDSMASDASSGPSHQQ 154
           DSDDSMASDASSGP++Q+
Sbjct: 64  DSDDSMASDASSGPNYQR 73

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BLAST of CmoCh10G002910 vs. TAIR 10
Match: AT5G08150.1 (suppressor of phytochrome b 5 )

HSP 1 Score: 46.6 bits (109), Expect = 3.1e-05
Identity = 32/73 (43.84%), Postives = 40/73 (54.79%), Query Frame = 0


Query: 77  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDD 136
           ME + +FG  E+C S ESGWTMY+   A+     D D     D+EE+E+          D
Sbjct: 1   MESANIFGSDEDCRSCESGWTMYL---ASQSHDRDDDCYYGDDDEEEED---------SD 60

Query: 137 SDDSMASDASSGP 150
             DSM SDASSGP
Sbjct: 61  GGDSMDSDASSGP 61

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BLAST of CmoCh10G002910 vs. TAIR 10
Match: AT1G26210.1 (SOB five-like 1 )

HSP 1 Score: 45.1 bits (105), Expect = 9.1e-05
Identity = 34/79 (43.04%), Postives = 41/79 (51.90%), Query Frame = 0


Query: 87  EECHSSESGWTMYI---------GSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDS 146
           EE  S ESGWTMYI          S    D   D     A D  E+++     D   ++S
Sbjct: 13  EEYSSCESGWTMYIEDAFHGNDQSSVVVDDDDDDTQVKEADDGYENDDGDTSDDGGDEES 72

Query: 147 DDSMASDASSGPSHQQRRH 157
           DDSMASDASSGPS+Q  +H
Sbjct: 73  DDSMASDASSGPSNQLPKH 91

The following BLAST results are available for this feature:

BLAST of CmoCh10G002910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKQ9	3.1e-05	46.15	Protein SOB FIVE-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=SOFL4 PE=2 SV=1	[more]
Q9LEZ1	4.4e-04	43.84	Protein SUPPRESSOR OF PHYTOCHROME B 5 OS=Arabidopsis thaliana OX=3702 GN=SOB5 PE...	[more]

BLAST of CmoCh10G002910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E405	2.8e-78	100.00	uncharacterized protein LOC111429737 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1E0K6	2.8e-78	100.00	uncharacterized protein LOC111429737 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1E0K4	1.1e-77	100.00	uncharacterized protein LOC111429737 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JKS2	2.5e-71	96.13	uncharacterized protein LOC111485335 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JFR5	2.5e-71	96.13	uncharacterized protein LOC111485335 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CmoCh10G002910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921472.1	5.8e-78	100.00	uncharacterized protein LOC111429737 isoform X1 [Cucurbita moschata] >XP_0229214...	[more]
XP_022921474.1	5.8e-78	100.00	uncharacterized protein LOC111429737 isoform X2 [Cucurbita moschata]	[more]
XP_022921475.1	2.2e-77	100.00	uncharacterized protein LOC111429737 isoform X3 [Cucurbita moschata] >XP_0229214...	[more]
KAG6589579.1	3.3e-73	97.40	hypothetical protein SDJN03_15002, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023516938.1	2.4e-71	96.15	uncharacterized protein LOC111780698 [Cucurbita pepo subsp. pepo] >XP_023516939....	[more]

BLAST of CmoCh10G002910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38790.1	2.2e-06	46.15	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G08150.1	3.1e-05	43.84	suppressor of phytochrome b 5	[more]
AT1G26210.1	9.1e-05	43.04	SOB five-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..230
None	No IPR available	PANTHER	PTHR33347:SF31	OS08G0486700 PROTEIN	coord: 77..214
IPR044670	SOB-five-Like (SOFL) family	PANTHER	PTHR33347	OSJNBA0091C07.3 PROTEIN	coord: 77..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G002910.1	CmoCh10G002910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009691	cytokinin biosynthetic process
biological_process	GO:0009690	cytokinin metabolic process