CmoCh10G002550 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh10G002550
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
LocationCmo_Chr10: 1131405 .. 1132147 (-)
RNA-Seq ExpressionCmoCh10G002550
SyntenyCmoCh10G002550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCTCTTCCATATCTCCCATGCCTAACCTTGCTCTTTCTCCTGCACGTTCTTCTACCGATTGCTGTTTCACAAGATCCGACCCTCTCGAGCCCCACCATAGCTCAATGCACCGCTAGTCTTCTTCCATTGGCATCGTGTGCGCCTTTCATGCAAGGTATGGCGTCAATGCCACCAATGACATGCTGTGGTAACCTGAAACAACTCTACACCAGTGTCCCCAGCTGCCTTTGCCTCTTGCTGAATGGCACTACCTTGAGTTCTTTCCCTATCAACACTACTAGAGCTACCCAGCTGCCTGATCTTTGCAGCCTTCAAGTTAACATCTCTACATGTTCAGGTATCACTATAATCCTGTCATCCTAAAGCCTCTTAAGTATCTTCTTCTACTTCGTTCTAACATTTATAACTCTCTGAATGGTCATTTGAAGCTCTCCTTGAGCCACCAAGTCCTCCAAGTTCTCATGTTTCTCCTAGAGTAGACACCAACACCACAATTACCAATGCTACGGTTCTAGGTATAGTTTTTGGTTCAGCTCTACTACAAGCACGACATGTTATACATTGTGACACTACTTTTATGGATTTCAGCTACTCCAGTGGGTCAACCAACGCCAAAACCTAGCATGGTGGGGTTAGGATTGGGCAGCATCAGTGCTAGTTTCAAGCCAAGGGCGGGAATTCAGCTCACAGTAGTGATTGCTATGAAGACTTTTCTGTTTCTTCTAGTTCTTCATTGA

mRNA sequence

ATGGCATCTCTTCCATATCTCCCATGCCTAACCTTGCTCTTTCTCCTGCACGTTCTTCTACCGATTGCTGTTTCACAAGATCCGACCCTCTCGAGCCCCACCATAGCTCAATGCACCGCTAGTCTTCTTCCATTGGCATCGTGTGCGCCTTTCATGCAAGGTATGGCGTCAATGCCACCAATGACATGCTGTGGTAACCTGAAACAACTCTACACCAGTGTCCCCAGCTGCCTTTGCCTCTTGCTGAATGGCACTACCTTGAGTTCTTTCCCTATCAACACTACTAGAGCTACCCAGCTGCCTGATCTTTGCAGCCTTCAAGTTAACATCTCTACATGTTCAGCTCTCCTTGAGCCACCAAGTCCTCCAAGTTCTCATGTTTCTCCTAGAGTAGACACCAACACCACAATTACCAATGCTACGGTTCTAGCTACTCCAGTGGGTCAACCAACGCCAAAACCTAGCATGGTGGGGTTAGGATTGGGCAGCATCAGTGCTAGTTTCAAGCCAAGGGCGGGAATTCAGCTCACAGTAGTGATTGCTATGAAGACTTTTCTGTTTCTTCTAGTTCTTCATTGA

Coding sequence (CDS)

ATGGCATCTCTTCCATATCTCCCATGCCTAACCTTGCTCTTTCTCCTGCACGTTCTTCTACCGATTGCTGTTTCACAAGATCCGACCCTCTCGAGCCCCACCATAGCTCAATGCACCGCTAGTCTTCTTCCATTGGCATCGTGTGCGCCTTTCATGCAAGGTATGGCGTCAATGCCACCAATGACATGCTGTGGTAACCTGAAACAACTCTACACCAGTGTCCCCAGCTGCCTTTGCCTCTTGCTGAATGGCACTACCTTGAGTTCTTTCCCTATCAACACTACTAGAGCTACCCAGCTGCCTGATCTTTGCAGCCTTCAAGTTAACATCTCTACATGTTCAGCTCTCCTTGAGCCACCAAGTCCTCCAAGTTCTCATGTTTCTCCTAGAGTAGACACCAACACCACAATTACCAATGCTACGGTTCTAGCTACTCCAGTGGGTCAACCAACGCCAAAACCTAGCATGGTGGGGTTAGGATTGGGCAGCATCAGTGCTAGTTTCAAGCCAAGGGCGGGAATTCAGCTCACAGTAGTGATTGCTATGAAGACTTTTCTGTTTCTTCTAGTTCTTCATTGA

Protein sequence

MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPPMTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPPSPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVVIAMKTFLFLLVLH
Homology
BLAST of CmoCh10G002550 vs. ExPASy Swiss-Prot
Match: Q9C9B1 (Non-specific lipid transfer protein GPI-anchored 10 OS=Arabidopsis thaliana OX=3702 GN=LTPG10 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.3e-21
Identity = 71/155 (45.81%), Postives = 90/155 (58.06%), Query Frame = 0

Query: 36  AQCTASLLPLASCAPFMQGMASMPPMTCCGNLKQLYTSVPSCLCLLLNGT-TLS-SFPIN 95
           A C + LL LA C PF+QG A +P   CC +L Q+Y+   +CLCL LN T TLS +FPIN
Sbjct: 28  ATCASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQIYSQEATCLCLFLNNTSTLSPAFPIN 87

Query: 96  TTRATQLPDLCSLQVNISTCSALL--EPPS-------PPSSHVSPRVDTNTTITNATVLA 155
            T A QLP LC++  N STCS+    E PS       PPSS    ++       N+ V A
Sbjct: 88  QTLALQLPPLCNIPANSSTCSSSFPGEAPSDSSSVAPPPSSSTGSQISQGAK-NNSRVAA 147

Query: 156 TPVGQPTPKP-SMVGLGLGSISASFKPRAGIQLTV 179
           TPV Q  P+P S +GLG G  S+  K  + IQLT+
Sbjct: 148 TPVAQMAPRPTSFMGLGYGLKSSGSK--SEIQLTI 179

BLAST of CmoCh10G002550 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.5e-08
Identity = 40/121 (33.06%), Postives = 62/121 (51.24%), Query Frame = 0

Query: 11  TLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPPMTCCGNLKQL 70
           T + L+ V + +A + D T       +CT  L+ +A+C P++QG A  P   CC  LKQ+
Sbjct: 11  TAIALIVVAMVVAAADDKTKDK---EECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQV 70

Query: 71  YTSVPSCLCLLL---NGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLE-PPSPPSSH 128
             S   CLC+++   N   L    IN + A  LP +C    +++ C ALL   P+ P + 
Sbjct: 71  LNSNKKCLCVIIQDRNDPDL-GLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQ 127

BLAST of CmoCh10G002550 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.2e-08
Identity = 44/135 (32.59%), Postives = 68/135 (50.37%), Query Frame = 0

Query: 37  QCTASLLPLASCAPFMQGMASMPPMTCCGNLKQLYTSVPSCLCLLL---NGTTLSSFPIN 96
           +CTA L+ +A+C P++QG A  P   CC  LKQ+  S   CLC+++   N   L    +N
Sbjct: 35  ECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERNDPDL-GLQVN 94

Query: 97  TTRATQLPDLCSLQVNISTCSALLE-PPSPPSSHVSPRV--DTNTTITNATVLATPVGQP 156
            + A  LP +C    +I+ C ALL   P+ P + V  ++    N T+ +A+       +P
Sbjct: 95  VSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQLAKGLNETV-SASAPTGSASEP 154

Query: 157 TPKPSMVGLGLGSIS 166
           T   S  G   G+ S
Sbjct: 155 TSMSSTPGSSAGNNS 167

BLAST of CmoCh10G002550 vs. ExPASy Swiss-Prot
Match: Q9LJ85 (Non-specific lipid transfer protein GPI-anchored 20 OS=Arabidopsis thaliana OX=3702 GN=LTPG20 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-05
Identity = 45/155 (29.03%), Postives = 68/155 (43.87%), Query Frame = 0

Query: 10  LTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLAS-CAPFMQGMAS---MPPMTCCG 69
           L +  +  + LPI   Q P      ++QCT S++   S C  F+   +S    P   CC 
Sbjct: 7   LVVAMIAVLALPIRGQQQP------LSQCTPSMMTTVSPCMGFITNSSSNGTSPSSDCCN 66

Query: 70  NLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPPSPP-- 129
           +L+ L T    CLCL++ GT   + PIN T A  LP  C++      C A + P + P  
Sbjct: 67  SLRSLTTGGMGCLCLIVTGTVPFNIPINRTTAVSLPRACNMPRVPLQCQANIAPAAAPGP 126

Query: 130 ----SSHVSPRVDTNTTITNATVLATPVGQPTPKP 155
                  +SP  +T+  +   T  A      T +P
Sbjct: 127 AATFGPSMSPGPETDPIVPEPTPAAQTPQSDTTRP 155

BLAST of CmoCh10G002550 vs. ExPASy Swiss-Prot
Match: Q1G2Y5 (Non-specific lipid transfer protein GPI-anchored 21 OS=Arabidopsis thaliana OX=3702 GN=LTPG21 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 7.4e-05
Identity = 43/143 (30.07%), Postives = 58/143 (40.56%), Query Frame = 0

Query: 38  CTASLL-PLASCAPFMQGMASMPPMTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTR 97
           C+ S+L  +  C  F+ G  S P   CCG LK L  +   CLCL++      S PIN T 
Sbjct: 33  CSPSMLSSVTGCTSFLTGGGSFPTSDCCGALKSLTGTGMDCLCLIVTAGVPISIPINRTL 92

Query: 98  ATQLPDLCSLQVNISTCSALLEP-PSPPSSHVSPR---VDTNTTITNATVLATPVGQPTP 157
           A  LP  C +      C A   P P+P  +   P     D+ T+    +    P   PT 
Sbjct: 93  AISLPRACGIPGVPVQCKASAAPLPTPGPASFGPTTSPTDSQTSDPEGSASFRPPTSPTT 152

Query: 158 KPS-----MVGLGLGSISASFKP 171
             +     + G G G     F P
Sbjct: 153 SQTPNDKDLSGSGNGGDPMGFAP 175

BLAST of CmoCh10G002550 vs. ExPASy TrEMBL
Match: A0A6J1E230 (protein YLS3 OS=Cucurbita moschata OX=3662 GN=LOC111430130 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0

Query: 1   MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPP 60
           MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPP
Sbjct: 1   MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPP 60

Query: 61  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP 120
           MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP
Sbjct: 61  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP 120

Query: 121 SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVVI 180
           SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVVI
Sbjct: 121 SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVVI 180

Query: 181 AMKTFLFLLVLH 193
           AMKTFLFLLVLH
Sbjct: 181 AMKTFLFLLVLH 192

BLAST of CmoCh10G002550 vs. ExPASy TrEMBL
Match: A0A6J1JIC4 (protein YLS3 OS=Cucurbita maxima OX=3661 GN=LOC111484860 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.6e-90
Identity = 180/192 (93.75%), Postives = 184/192 (95.83%), Query Frame = 0

Query: 1   MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPP 60
           MASLPYLPCLTLL LLHV LPIAVSQDPT SSPTIAQCT SLL LASCAPF+QGMAS PP
Sbjct: 1   MASLPYLPCLTLLLLLHVTLPIAVSQDPTPSSPTIAQCTTSLLQLASCAPFVQGMASTPP 60

Query: 61  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP 120
           MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNIS CSALLEPP
Sbjct: 61  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISACSALLEPP 120

Query: 121 SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVVI 180
           SPPSSHVSPRV+TN+TITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTV I
Sbjct: 121 SPPSSHVSPRVNTNSTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVAI 180

Query: 181 AMKTFLFLLVLH 193
           AMKTFLFL+VLH
Sbjct: 181 AMKTFLFLVVLH 192

BLAST of CmoCh10G002550 vs. ExPASy TrEMBL
Match: A0A5A7TH96 (Protein YLS3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00390 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.0e-70
Identity = 151/199 (75.88%), Postives = 166/199 (83.42%), Query Frame = 0

Query: 1   MASLPYLPC-------LTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQ 60
           MASLPYLP        L+LLFLLHV LPI +SQ PT+S+PTIAQCT S+LPLASCAPF+Q
Sbjct: 1   MASLPYLPLPQLAISYLSLLFLLHV-LPITISQGPTISTPTIAQCTTSILPLASCAPFVQ 60

Query: 61  GMASMPPMTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTC 120
           G+   PPM CC NLKQLY  VP+CLCLLLN T LSSFPINTTRA QLPDLCSLQVNISTC
Sbjct: 61  GVTPTPPMGCCDNLKQLYNIVPNCLCLLLNDTNLSSFPINTTRALQLPDLCSLQVNISTC 120

Query: 121 SALLEPPSPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAG 180
           SALL  PSPPSSHV PRV  N+TI+NATVLA+PV QPTPKPS+VGLGLG ISASFK R G
Sbjct: 121 SALLGSPSPPSSHVPPRVHINSTISNATVLASPVTQPTPKPSIVGLGLGKISASFKLRGG 180

Query: 181 IQLTVVIAMKTFLFLLVLH 193
           IQLT VIA+ TFLFL+VL+
Sbjct: 181 IQLTAVIAITTFLFLVVLY 198

BLAST of CmoCh10G002550 vs. ExPASy TrEMBL
Match: A0A1S3BVJ6 (protein YLS3 OS=Cucumis melo OX=3656 GN=LOC103494119 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.0e-70
Identity = 151/199 (75.88%), Postives = 166/199 (83.42%), Query Frame = 0

Query: 1   MASLPYLPC-------LTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQ 60
           MASLPYLP        L+LLFLLHV LPI +SQ PT+S+PTIAQCT S+LPLASCAPF+Q
Sbjct: 1   MASLPYLPLPQLAISYLSLLFLLHV-LPITISQGPTISTPTIAQCTTSILPLASCAPFVQ 60

Query: 61  GMASMPPMTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTC 120
           G+   PPM CC NLKQLY  VP+CLCLLLN T LSSFPINTTRA QLPDLCSLQVNISTC
Sbjct: 61  GVTPTPPMGCCDNLKQLYNIVPNCLCLLLNDTNLSSFPINTTRALQLPDLCSLQVNISTC 120

Query: 121 SALLEPPSPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAG 180
           SALL  PSPPSSHV PRV  N+TI+NATVLA+PV QPTPKPS+VGLGLG ISASFK R G
Sbjct: 121 SALLGSPSPPSSHVPPRVHINSTISNATVLASPVTQPTPKPSIVGLGLGKISASFKLRGG 180

Query: 181 IQLTVVIAMKTFLFLLVLH 193
           IQLT VIA+ TFLFL+VL+
Sbjct: 181 IQLTAVIAITTFLFLVVLY 198

BLAST of CmoCh10G002550 vs. ExPASy TrEMBL
Match: A0A0A0LSN1 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G022510 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 3.5e-66
Identity = 143/197 (72.59%), Postives = 162/197 (82.23%), Query Frame = 0

Query: 1   MASLPYLPC-------LTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQ 60
           MASLP+LP        L+LLFLLHV LPI +SQ PT+S+PTIAQCT S+LPLASCAPF+Q
Sbjct: 1   MASLPHLPLPQQAISYLSLLFLLHV-LPITISQGPTISTPTIAQCTTSILPLASCAPFVQ 60

Query: 61  GMASMPPMTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTC 120
           G+   PPM CC NLKQLY  VP+CLCLLLNGT LSSFPINTTRA QLPD+CSLQVNISTC
Sbjct: 61  GVTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTC 120

Query: 121 SALLEPPSPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAG 180
           SALL PPSPPSSHV PRV  N+TI+NATVLA+P+ QPTPKPS+VGLGLG ISASFK + G
Sbjct: 121 SALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISASFKLKGG 180

Query: 181 IQLTVVIAMKTFLFLLV 191
           IQLT +  M  F+ LL+
Sbjct: 181 IQLTQLAVMFFFIRLLL 196

BLAST of CmoCh10G002550 vs. NCBI nr
Match: XP_022922067.1 (protein YLS3 [Cucurbita moschata])

HSP 1 Score: 365.5 bits (937), Expect = 2.7e-97
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0

Query: 1   MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPP 60
           MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPP
Sbjct: 1   MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPP 60

Query: 61  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP 120
           MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP
Sbjct: 61  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP 120

Query: 121 SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVVI 180
           SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVVI
Sbjct: 121 SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVVI 180

Query: 181 AMKTFLFLLVLH 193
           AMKTFLFLLVLH
Sbjct: 181 AMKTFLFLLVLH 192

BLAST of CmoCh10G002550 vs. NCBI nr
Match: KAG6589554.1 (Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362.5 bits (929), Expect = 2.3e-96
Identity = 190/192 (98.96%), Postives = 191/192 (99.48%), Query Frame = 0

Query: 1   MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPP 60
           MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPF+QGMASMPP
Sbjct: 1   MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFVQGMASMPP 60

Query: 61  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP 120
           MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP
Sbjct: 61  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP 120

Query: 121 SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVVI 180
           SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTV I
Sbjct: 121 SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVAI 180

Query: 181 AMKTFLFLLVLH 193
           AMKTFLFLLVLH
Sbjct: 181 AMKTFLFLLVLH 192

BLAST of CmoCh10G002550 vs. NCBI nr
Match: KAG7023240.1 (Protein YLS3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362.5 bits (929), Expect = 2.3e-96
Identity = 190/192 (98.96%), Postives = 191/192 (99.48%), Query Frame = 0

Query: 1   MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPP 60
           MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPF+QGMASMPP
Sbjct: 30  MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFVQGMASMPP 89

Query: 61  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP 120
           MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP
Sbjct: 90  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP 149

Query: 121 SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVVI 180
           SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTV I
Sbjct: 150 SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVAI 209

Query: 181 AMKTFLFLLVLH 193
           AMKTFLFLLVLH
Sbjct: 210 AMKTFLFLLVLH 221

BLAST of CmoCh10G002550 vs. NCBI nr
Match: XP_023515373.1 (protein YLS3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.1 bits (915), Expect = 9.7e-95
Identity = 187/192 (97.40%), Postives = 190/192 (98.96%), Query Frame = 0

Query: 1   MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPP 60
           MASLPYLPCLTLLFLLHV LPIAVSQDPTLSSPTIAQCTASLLPLASCAPF+QGMASMPP
Sbjct: 1   MASLPYLPCLTLLFLLHVTLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFVQGMASMPP 60

Query: 61  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP 120
           MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPD+CSLQVNISTCSALLEPP
Sbjct: 61  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDICSLQVNISTCSALLEPP 120

Query: 121 SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVVI 180
           SPPSSHVSPRV+TNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQL VVI
Sbjct: 121 SPPSSHVSPRVNTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLKVVI 180

Query: 181 AMKTFLFLLVLH 193
           AMKTFLFLLVLH
Sbjct: 181 AMKTFLFLLVLH 192

BLAST of CmoCh10G002550 vs. NCBI nr
Match: XP_022987249.1 (protein YLS3 [Cucurbita maxima])

HSP 1 Score: 342.0 bits (876), Expect = 3.2e-90
Identity = 180/192 (93.75%), Postives = 184/192 (95.83%), Query Frame = 0

Query: 1   MASLPYLPCLTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPP 60
           MASLPYLPCLTLL LLHV LPIAVSQDPT SSPTIAQCT SLL LASCAPF+QGMAS PP
Sbjct: 1   MASLPYLPCLTLLLLLHVTLPIAVSQDPTPSSPTIAQCTTSLLQLASCAPFVQGMASTPP 60

Query: 61  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPP 120
           MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNIS CSALLEPP
Sbjct: 61  MTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISACSALLEPP 120

Query: 121 SPPSSHVSPRVDTNTTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVVI 180
           SPPSSHVSPRV+TN+TITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTV I
Sbjct: 121 SPPSSHVSPRVNTNSTITNATVLATPVGQPTPKPSMVGLGLGSISASFKPRAGIQLTVAI 180

Query: 181 AMKTFLFLLVLH 193
           AMKTFLFL+VLH
Sbjct: 181 AMKTFLFLVVLH 192

BLAST of CmoCh10G002550 vs. TAIR 10
Match: AT1G73890.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-22
Identity = 71/155 (45.81%), Postives = 90/155 (58.06%), Query Frame = 0

Query: 36  AQCTASLLPLASCAPFMQGMASMPPMTCCGNLKQLYTSVPSCLCLLLNGT-TLS-SFPIN 95
           A C + LL LA C PF+QG A +P   CC +L Q+Y+   +CLCL LN T TLS +FPIN
Sbjct: 28  ATCASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQIYSQEATCLCLFLNNTSTLSPAFPIN 87

Query: 96  TTRATQLPDLCSLQVNISTCSALL--EPPS-------PPSSHVSPRVDTNTTITNATVLA 155
            T A QLP LC++  N STCS+    E PS       PPSS    ++       N+ V A
Sbjct: 88  QTLALQLPPLCNIPANSSTCSSSFPGEAPSDSSSVAPPPSSSTGSQISQGAK-NNSRVAA 147

Query: 156 TPVGQPTPKP-SMVGLGLGSISASFKPRAGIQLTV 179
           TPV Q  P+P S +GLG G  S+  K  + IQLT+
Sbjct: 148 TPVAQMAPRPTSFMGLGYGLKSSGSK--SEIQLTI 179

BLAST of CmoCh10G002550 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.9e-09
Identity = 40/121 (33.06%), Postives = 62/121 (51.24%), Query Frame = 0

Query: 11  TLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLASCAPFMQGMASMPPMTCCGNLKQL 70
           T + L+ V + +A + D T       +CT  L+ +A+C P++QG A  P   CC  LKQ+
Sbjct: 11  TAIALIVVAMVVAAADDKTKDK---EECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQV 70

Query: 71  YTSVPSCLCLLL---NGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLE-PPSPPSSH 128
             S   CLC+++   N   L    IN + A  LP +C    +++ C ALL   P+ P + 
Sbjct: 71  LNSNKKCLCVIIQDRNDPDL-GLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQ 127

BLAST of CmoCh10G002550 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 5.1e-09
Identity = 44/135 (32.59%), Postives = 68/135 (50.37%), Query Frame = 0

Query: 37  QCTASLLPLASCAPFMQGMASMPPMTCCGNLKQLYTSVPSCLCLLL---NGTTLSSFPIN 96
           +CTA L+ +A+C P++QG A  P   CC  LKQ+  S   CLC+++   N   L    +N
Sbjct: 35  ECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERNDPDL-GLQVN 94

Query: 97  TTRATQLPDLCSLQVNISTCSALLE-PPSPPSSHVSPRV--DTNTTITNATVLATPVGQP 156
            + A  LP +C    +I+ C ALL   P+ P + V  ++    N T+ +A+       +P
Sbjct: 95  VSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQLAKGLNETV-SASAPTGSASEP 154

Query: 157 TPKPSMVGLGLGSIS 166
           T   S  G   G+ S
Sbjct: 155 TSMSSTPGSSAGNNS 167

BLAST of CmoCh10G002550 vs. TAIR 10
Match: AT3G22620.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06
Identity = 45/155 (29.03%), Postives = 68/155 (43.87%), Query Frame = 0

Query: 10  LTLLFLLHVLLPIAVSQDPTLSSPTIAQCTASLLPLAS-CAPFMQGMAS---MPPMTCCG 69
           L +  +  + LPI   Q P      ++QCT S++   S C  F+   +S    P   CC 
Sbjct: 7   LVVAMIAVLALPIRGQQQP------LSQCTPSMMTTVSPCMGFITNSSSNGTSPSSDCCN 66

Query: 70  NLKQLYTSVPSCLCLLLNGTTLSSFPINTTRATQLPDLCSLQVNISTCSALLEPPSPP-- 129
           +L+ L T    CLCL++ GT   + PIN T A  LP  C++      C A + P + P  
Sbjct: 67  SLRSLTTGGMGCLCLIVTGTVPFNIPINRTTAVSLPRACNMPRVPLQCQANIAPAAAPGP 126

Query: 130 ----SSHVSPRVDTNTTITNATVLATPVGQPTPKP 155
                  +SP  +T+  +   T  A      T +P
Sbjct: 127 AATFGPSMSPGPETDPIVPEPTPAAQTPQSDTTRP 155

BLAST of CmoCh10G002550 vs. TAIR 10
Match: AT1G05450.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 5.3e-06
Identity = 43/143 (30.07%), Postives = 58/143 (40.56%), Query Frame = 0

Query: 38  CTASLL-PLASCAPFMQGMASMPPMTCCGNLKQLYTSVPSCLCLLLNGTTLSSFPINTTR 97
           C+ S+L  +  C  F+ G  S P   CCG LK L  +   CLCL++      S PIN T 
Sbjct: 33  CSPSMLSSVTGCTSFLTGGGSFPTSDCCGALKSLTGTGMDCLCLIVTAGVPISIPINRTL 92

Query: 98  ATQLPDLCSLQVNISTCSALLEP-PSPPSSHVSPR---VDTNTTITNATVLATPVGQPTP 157
           A  LP  C +      C A   P P+P  +   P     D+ T+    +    P   PT 
Sbjct: 93  AISLPRACGIPGVPVQCKASAAPLPTPGPASFGPTTSPTDSQTSDPEGSASFRPPTSPTT 152

Query: 158 KPS-----MVGLGLGSISASFKP 171
             +     + G G G     F P
Sbjct: 153 SQTPNDKDLSGSGNGGDPMGFAP 175

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9C9B13.3e-2145.81Non-specific lipid transfer protein GPI-anchored 10 OS=Arabidopsis thaliana OX=3... [more]
O648655.5e-0833.06Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3... [more]
O648647.2e-0832.59Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3... [more]
Q9LJ851.5e-0529.03Non-specific lipid transfer protein GPI-anchored 20 OS=Arabidopsis thaliana OX=3... [more]
Q1G2Y57.4e-0530.07Non-specific lipid transfer protein GPI-anchored 21 OS=Arabidopsis thaliana OX=3... [more]
Match NameE-valueIdentityDescription
A0A6J1E2301.3e-97100.00protein YLS3 OS=Cucurbita moschata OX=3662 GN=LOC111430130 PE=4 SV=1[more]
A0A6J1JIC41.6e-9093.75protein YLS3 OS=Cucurbita maxima OX=3661 GN=LOC111484860 PE=4 SV=1[more]
A0A5A7TH964.0e-7075.88Protein YLS3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00390 P... [more]
A0A1S3BVJ64.0e-7075.88protein YLS3 OS=Cucumis melo OX=3656 GN=LOC103494119 PE=4 SV=1[more]
A0A0A0LSN13.5e-6672.59AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G022510 PE=4 SV... [more]
Match NameE-valueIdentityDescription
XP_022922067.12.7e-97100.00protein YLS3 [Cucurbita moschata][more]
KAG6589554.12.3e-9698.96Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7023240.12.3e-9698.96Protein YLS3, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023515373.19.7e-9597.40protein YLS3 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022987249.13.2e-9093.75protein YLS3 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT1G73890.12.4e-2245.81Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G44300.13.9e-0933.06Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G44290.15.1e-0932.59Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT3G22620.11.1e-0629.03Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G05450.25.3e-0630.07Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 38..113
e-value: 0.002
score: 27.4
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 22..113
e-value: 1.6E-14
score: 53.8
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 34..113
e-value: 4.9E-14
score: 53.9
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 37..113
IPR043325Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) ProteinPANTHERPTHR33044BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATEDcoord: 14..155
NoneNo IPR availablePANTHERPTHR33044:SF11BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEINcoord: 14..155
NoneNo IPR availableCDDcd00010AAI_LTSScoord: 45..106
e-value: 2.55115E-13
score: 60.1331

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G002550.1CmoCh10G002550.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane