CmoCh10G002530 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G002530
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr10: 1128584 .. 1129201 (+)
RNA-Seq Expression	CmoCh10G002530
Synteny	CmoCh10G002530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCCTGCGTTGACAGCAGGAAGCGGCTACGGGATGAATCCAATGATTCTCTCTTCAATTTTATCGGATCCAACTCTAAGTTCGTCCGACTTGATTCCGCTAACTTGGATGTGGATGATGCGCCGATTGCTTCCGTTTCATCGGATGCGAAATCGATCGATTCGTTTCAGGCAAACTTAATTCAGGATGACCTGCTGAAGATTCTCGACGACGTCGATGCTTACATAGATCGCGAGTCGGAGATTCAAGATCTCGACTCGGTGATTAGAAGCTTCGAGAAGGAAATTCAGGTGCCGGTTCCTTCTGGTCAGCCCGAACTTGGCTTCCTTTTGGAAGCGTCGGACGATGAATTAGGGCTTCCGCCGGCTGGTGAGAAAGAGGAGACCGAGGCCGTTAACTTCGCGGCAGAGTTTTTAGGTAGCGGCGATATGAAAGGAATTTTAGGGCTTGAGGATGAAACTGTTCCGAATTACTGTTGGCTTGAGAATTTGAGGAGTGAGAACGAATGGAATCGAGAGGAGGAGGAAGAGGTGGTGGTGTTGGGTGGATTGTTCGATCATACAGACGTGGCGACGGAATTGGCGTATCGATCGGAGACCATGCCTTGTTTATAA

mRNA sequence

ATGGAAGCCTGCGTTGACAGCAGGAAGCGGCTACGGGATGAATCCAATGATTCTCTCTTCAATTTTATCGGATCCAACTCTAAGTTCGTCCGACTTGATTCCGCTAACTTGGATGTGGATGATGCGCCGATTGCTTCCGTTTCATCGGATGCGAAATCGATCGATTCGTTTCAGGCAAACTTAATTCAGGATGACCTGCTGAAGATTCTCGACGACGTCGATGCTTACATAGATCGCGAGTCGGAGATTCAAGATCTCGACTCGGTGATTAGAAGCTTCGAGAAGGAAATTCAGGTGCCGGTTCCTTCTGGTCAGCCCGAACTTGGCTTCCTTTTGGAAGCGTCGGACGATGAATTAGGGCTTCCGCCGGCTGGTGAGAAAGAGGAGACCGAGGCCGTTAACTTCGCGGCAGAGTTTTTAGGTAGCGGCGATATGAAAGGAATTTTAGGGCTTGAGGATGAAACTGTTCCGAATTACTGTTGGCTTGAGAATTTGAGGAGTGAGAACGAATGGAATCGAGAGGAGGAGGAAGAGGTGGTGGTGTTGGGTGGATTGTTCGATCATACAGACGTGGCGACGGAATTGGCGTATCGATCGGAGACCATGCCTTGTTTATAA

Coding sequence (CDS)

ATGGAAGCCTGCGTTGACAGCAGGAAGCGGCTACGGGATGAATCCAATGATTCTCTCTTCAATTTTATCGGATCCAACTCTAAGTTCGTCCGACTTGATTCCGCTAACTTGGATGTGGATGATGCGCCGATTGCTTCCGTTTCATCGGATGCGAAATCGATCGATTCGTTTCAGGCAAACTTAATTCAGGATGACCTGCTGAAGATTCTCGACGACGTCGATGCTTACATAGATCGCGAGTCGGAGATTCAAGATCTCGACTCGGTGATTAGAAGCTTCGAGAAGGAAATTCAGGTGCCGGTTCCTTCTGGTCAGCCCGAACTTGGCTTCCTTTTGGAAGCGTCGGACGATGAATTAGGGCTTCCGCCGGCTGGTGAGAAAGAGGAGACCGAGGCCGTTAACTTCGCGGCAGAGTTTTTAGGTAGCGGCGATATGAAAGGAATTTTAGGGCTTGAGGATGAAACTGTTCCGAATTACTGTTGGCTTGAGAATTTGAGGAGTGAGAACGAATGGAATCGAGAGGAGGAGGAAGAGGTGGTGGTGTTGGGTGGATTGTTCGATCATACAGACGTGGCGACGGAATTGGCGTATCGATCGGAGACCATGCCTTGTTTATAA

Protein sequence

MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDELGLPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVVVLGGLFDHTDVATELAYRSETMPCL

Homology

[Close]

BLAST of CmoCh10G002530 vs. ExPASy TrEMBL
Match: A0A6J1E5H5 (uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC111429674 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.1e-109
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN 60
           MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN
Sbjct: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN 60

Query: 61  LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDELG 120
           LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDELG
Sbjct: 61  LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDELG 120

Query: 121 LPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV 180
           LPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV
Sbjct: 121 LPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV 180

Query: 181 VLGGLFDHTDVATELAYRSETMPCL 206
           VLGGLFDHTDVATELAYRSETMPCL
Sbjct: 181 VLGGLFDHTDVATELAYRSETMPCL 205

[Close]

BLAST of CmoCh10G002530 vs. ExPASy TrEMBL
Match: A0A5D3DXI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00410 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.8e-67
Identity = 148/210 (70.48%), Postives = 166/210 (79.05%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESN-DSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQA 60
           ME CVD+RKRLRD+SN DSLFN IGS+SKF+RL++      DAP+      ++S DSFQ+
Sbjct: 21  MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPV------SQSTDSFQS 80

Query: 61  -NLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDE 120
            + IQ+DLLKILDD DA IDRE+ IQDLDSVIRSFEKEI+VPVP  QPELGFLLEASDDE
Sbjct: 81  HHTIQEDLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVPVPVVQPELGFLLEASDDE 140

Query: 121 LGLPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSE-NEWNREEEE 180
           LGLPPAGEKEE E     AEF GSG +KG+LG EDE V NYCW +NLR E  EW+ EEEE
Sbjct: 141 LGLPPAGEKEEIE----EAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWSPEEEE 200

Query: 181 EVVVLGGLFDHTDVATEL--AYRSETMPCL 206
           EVV LGGLFDHTDVA EL  AYRSE MPCL
Sbjct: 201 EVVALGGLFDHTDVAAELPTAYRSERMPCL 220

[Close]

BLAST of CmoCh10G002530 vs. ExPASy TrEMBL
Match: A0A5A7UZW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34725G00010 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.7e-66
Identity = 148/210 (70.48%), Postives = 165/210 (78.57%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESN-DSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQA 60
           ME CVD+RKRLRD+SN DSLFN IGS+SKF+RL++      DAP+      ++S DSFQ+
Sbjct: 21  MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPV------SQSTDSFQS 80

Query: 61  -NLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDE 120
            + IQ+DLLKILDD DA IDRE+ IQDLDSVIRSFEKEI+VPVP  QPELGFLLEASDDE
Sbjct: 81  HHTIQEDLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVPVPVVQPELGFLLEASDDE 140

Query: 121 LGLPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSE-NEWNREEEE 180
           LGLPPAGEKEE E     AEF GSG +KG+LG EDE V NYCW +NLR E  EW  EEEE
Sbjct: 141 LGLPPAGEKEEIE----EAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWIPEEEE 200

Query: 181 EVVVLGGLFDHTDVATEL--AYRSETMPCL 206
           EVV LGGLFDHTDVA EL  AYRSE MPCL
Sbjct: 201 EVVALGGLFDHTDVAAELPTAYRSERMPCL 220

[Close]

BLAST of CmoCh10G002530 vs. ExPASy TrEMBL
Match: A0A1S3BWV1 (uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.7e-66
Identity = 148/210 (70.48%), Postives = 165/210 (78.57%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESN-DSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQA 60
           ME CVD+RKRLRD+SN DSLFN IGS+SKF+RL++      DAP+      ++S DSFQ+
Sbjct: 1   MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPV------SQSTDSFQS 60

Query: 61  -NLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDE 120
            + IQ+DLLKILDD DA IDRE+ IQDLDSVIRSFEKEI+VPVP  QPELGFLLEASDDE
Sbjct: 61  HHTIQEDLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVPVPVVQPELGFLLEASDDE 120

Query: 121 LGLPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSE-NEWNREEEE 180
           LGLPPAGEKEE E     AEF GSG +KG+LG EDE V NYCW +NLR E  EW  EEEE
Sbjct: 121 LGLPPAGEKEEIE----EAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWIPEEEE 180

Query: 181 EVVVLGGLFDHTDVATEL--AYRSETMPCL 206
           EVV LGGLFDHTDVA EL  AYRSE MPCL
Sbjct: 181 EVVALGGLFDHTDVAAELPTAYRSERMPCL 200

[Close]

BLAST of CmoCh10G002530 vs. ExPASy TrEMBL
Match: A0A0A0LS21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.3e-63
Identity = 147/214 (68.69%), Postives = 162/214 (75.70%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQA- 60
           ME  +DSRKRLRD+SNDSLFN IGSNSKF+RL++      DAP+      + S DSF + 
Sbjct: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPV------SHSTDSFHSH 60

Query: 61  NLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVP----VPSGQPELGFLLEAS 120
           + IQ+DLLKILDD DA IDRE+ IQDLDSVIRSFEKEI+VP    VP  QPELGFLLEAS
Sbjct: 61  HTIQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEAS 120

Query: 121 DDELGLPP-AGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSE-NEWNR 180
           DDELGLPP AGEKEE E     AEF GSG +KG LG EDE V NYCW +NLR E  EW+ 
Sbjct: 121 DDELGLPPAAGEKEEIE----EAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWST 180

Query: 181 EEEEEVVVLGGLFDHTDVATEL--AYRSETMPCL 206
           EEEEEVV LGGLFDHTDVA EL  AYRSE MPCL
Sbjct: 181 EEEEEVVALGGLFDHTDVAAELPTAYRSERMPCL 204

[Close]

BLAST of CmoCh10G002530 vs. NCBI nr
Match: XP_022921385.1 (uncharacterized protein LOC111429674 [Cucurbita moschata])

HSP 1 Score: 404.8 bits (1039), Expect = 4.3e-109
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN 60
           MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN
Sbjct: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN 60

Query: 61  LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDELG 120
           LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDELG
Sbjct: 61  LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDELG 120

Query: 121 LPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV 180
           LPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV
Sbjct: 121 LPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV 180

Query: 181 VLGGLFDHTDVATELAYRSETMPCL 206
           VLGGLFDHTDVATELAYRSETMPCL
Sbjct: 181 VLGGLFDHTDVATELAYRSETMPCL 205

[Close]

BLAST of CmoCh10G002530 vs. NCBI nr
Match: KAG7023238.1 (hypothetical protein SDJN02_14263, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396.4 bits (1017), Expect = 1.5e-106
Identity = 202/205 (98.54%), Postives = 202/205 (98.54%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN 60
           MEACVDSRKRLRDES DSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN
Sbjct: 1   MEACVDSRKRLRDESKDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN 60

Query: 61  LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDELG 120
           LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPS QPELGFLLEASDDELG
Sbjct: 61  LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEASDDELG 120

Query: 121 LPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV 180
           LPPAGEKEETEAVNFAAEFLGSG MKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV
Sbjct: 121 LPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV 180

Query: 181 VLGGLFDHTDVATELAYRSETMPCL 206
           VLGGLFDHTDVATELAYRSETMPCL
Sbjct: 181 VLGGLFDHTDVATELAYRSETMPCL 205

[Close]

BLAST of CmoCh10G002530 vs. NCBI nr
Match: KAG6589552.1 (hypothetical protein SDJN03_14975, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 202/210 (96.19%), Postives = 202/210 (96.19%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSI-----D 60
           MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSI     D
Sbjct: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSSGLD 60

Query: 61  SFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEAS 120
           SFQANLIQDDLLKILDDVDAYIDRE EIQDLDSVIRSFEKEIQVPVPS QPELGFLLEAS
Sbjct: 61  SFQANLIQDDLLKILDDVDAYIDRELEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEAS 120

Query: 121 DDELGLPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSENEWNREE 180
           DDELGLPPAGEKEETEAVNFAAEFLGSG MKGILGLEDETVPNYCWLENLRSENEWNREE
Sbjct: 121 DDELGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREE 180

Query: 181 EEEVVVLGGLFDHTDVATELAYRSETMPCL 206
           EEEVVVLGGLFDHTDVATELAYRSETMPCL
Sbjct: 181 EEEVVVLGGLFDHTDVATELAYRSETMPCL 210

[Close]

BLAST of CmoCh10G002530 vs. NCBI nr
Match: XP_023516749.1 (uncharacterized protein LOC111780554 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103
Identity = 200/210 (95.24%), Postives = 202/210 (96.19%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSI-----D 60
           MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAP ASVSSDAKSI     D
Sbjct: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPNASVSSDAKSIDSSGLD 60

Query: 61  SFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEAS 120
           SFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPS QPELGFLLEAS
Sbjct: 61  SFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEAS 120

Query: 121 DDELGLPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSENEWNREE 180
           DDELGLPPAGEKEETEAVNFAAEFLGSG MKGILGLEDE+VPNYCWLENLRSENEW+REE
Sbjct: 121 DDELGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDESVPNYCWLENLRSENEWSREE 180

Query: 181 EEEVVVLGGLFDHTDVATELAYRSETMPCL 206
           EEEVVVLGGLFDHTDVATELAYRSETMPCL
Sbjct: 181 EEEVVVLGGLFDHTDVATELAYRSETMPCL 210

[Close]

BLAST of CmoCh10G002530 vs. NCBI nr
Match: XP_038890344.1 (uncharacterized protein LOC120079943 [Benincasa hispida])

HSP 1 Score: 278.5 bits (711), Expect = 4.7e-71
Identity = 154/209 (73.68%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLD-SANLDVDDAPIASVSSDAKSIDSFQA 60
           ME CVD+RKRL D+SNDSLFN+IGSNSKF+RL+ SA+L+  DAP+A  S D+  +DSFQA
Sbjct: 1   MEPCVDTRKRLWDDSNDSLFNYIGSNSKFLRLENSADLNF-DAPVAK-SIDSSGLDSFQA 60

Query: 61  NLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDEL 120
           + IQ+DLLKILDD +A IDRES I+DLDSVIRSFEKEI+VPVP  QPELGFLLEASDDEL
Sbjct: 61  HAIQEDLLKILDDTEASIDRESAIEDLDSVIRSFEKEIEVPVPVVQPELGFLLEASDDEL 120

Query: 121 GLPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSE-NEWNREEEEE 180
           GLPPAGEK E E  N     LGSG +KGILG EDE V NYCW ENLRSE  EW+ E EEE
Sbjct: 121 GLPPAGEKGEIEGGN-----LGSGGLKGILGFEDENVSNYCWFENLRSEIKEWSPEGEEE 180

Query: 181 VVVLGGLFDHTDVATEL--AYRSETMPCL 206
           VV LGGLFDHTDVA EL  AYRSETMPCL
Sbjct: 181 VVALGGLFDHTDVAAELPTAYRSETMPCL 202

[Close]

BLAST of CmoCh10G002530 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12
Identity = 66/197 (33.50%), Postives = 90/197 (45.69%), Query Frame = 0


Query: 31  RLDSANLDVDDAPIASVSSDAKSIDSFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVI 90
           R DSA    +   +   S D   +DS +   ++DDL  +LDD D     E   QDLDSV+
Sbjct: 10  RTDSA----EKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDP----EPVSQDLDSVM 69

Query: 91  RSFEKEIQVPVPS----------GQPELGFLLEASDDELGLPPAGE-------KEETEAV 150
           +SFE E+     +           QP+LG+LLEASDDELGLPP          KEE    
Sbjct: 70  KSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTE 129

Query: 151 NFAAEFLGSGDMKG---ILGLEDETVPNYCWLENLRSENEWNREEEEEVVVLGGLFDHTD 204
                   S D  G   I G ED  V NY  L+      +       + V + GLF+ +D
Sbjct: 130 TVTDLVRASSDSSGIDEIWGFEDH-VSNYGGLDFGSGVGDGG-----DYVAVEGLFEFSD 189

[Close]

BLAST of CmoCh10G002530 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 65.9 bits (159), Expect = 4.4e-11
Identity = 57/153 (37.25%), Postives = 71/153 (46.41%), Query Frame = 0


Query: 31  RLDSANLDVDDAPIASVSSDAKSIDSFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVI 90
           R DSA    +   +   S D   +DS +   ++DDL  +LDD D     E   QDLDSV+
Sbjct: 10  RTDSA----EKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDP----EPVSQDLDSVM 69

Query: 91  RSFEKEIQVPVPS----------GQPELGFLLEASDDELGLPPAGE-------KEETEAV 150
           +SFE E+     +           QP+LG+LLEASDDELGLPP          KEE    
Sbjct: 70  KSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTE 129

Query: 151 NFAAEFLGSGDMKG---ILGLEDETVPNYCWLE 164
                   S D  G   I G ED  V NY  L+
Sbjct: 130 TVTDLVRASSDSSGIDEIWGFEDH-VSNYGGLD 153

[Close]

BLAST of CmoCh10G002530 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 65.9 bits (159), Expect = 4.4e-11
Identity = 57/153 (37.25%), Postives = 71/153 (46.41%), Query Frame = 0


Query: 31  RLDSANLDVDDAPIASVSSDAKSIDSFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVI 90
           R DSA    +   +   S D   +DS +   ++DDL  +LDD D     E   QDLDSV+
Sbjct: 10  RTDSA----EKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDP----EPVSQDLDSVM 69

Query: 91  RSFEKEIQVPVPS----------GQPELGFLLEASDDELGLPPAGE-------KEETEAV 150
           +SFE E+     +           QP+LG+LLEASDDELGLPP          KEE    
Sbjct: 70  KSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTE 129

Query: 151 NFAAEFLGSGDMKG---ILGLEDETVPNYCWLE 164
                   S D  G   I G ED  V NY  L+
Sbjct: 130 TVTDLVRASSDSSGIDEIWGFEDH-VSNYGGLD 153

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BLAST of CmoCh10G002530 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-08
Identity = 45/120 (37.50%), Postives = 64/120 (53.33%), Query Frame = 0


Query: 50  DAKSIDSFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQ---VPVPSG-- 109
           D   +DS     ++DDL       D+ +D  S  QDLDSV++SFE E+      + SG  
Sbjct: 22  DGLDLDSPDVKRLRDDLFD-----DSGLDPVS--QDLDSVMKSFENELSTTTAALSSGET 81

Query: 110 QPELGFLLEASDDELG-----------LPPAGEKEETEAVNFAAEFLGSGDMKGILGLED 154
           QP+LG+L EASDDELG           LPP+ E+  TE V  +++   S ++  + G ED
Sbjct: 82  QPDLGYLFEASDDELGLPPPLTPPQTLLPPSCEETVTELVRASSD---SSEVGELCGFED 131

The following BLAST results are available for this feature:

BLAST of CmoCh10G002530 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh10G002530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5H5	2.1e-109	100.00	uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC1114296...	[more]
A0A5D3DXI3	5.8e-67	70.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UZW3	1.7e-66	70.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BWV1	1.7e-66	70.48	uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=...	[more]
A0A0A0LS21	2.3e-63	68.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1	[more]

BLAST of CmoCh10G002530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921385.1	4.3e-109	100.00	uncharacterized protein LOC111429674 [Cucurbita moschata]	[more]
KAG7023238.1	1.5e-106	98.54	hypothetical protein SDJN02_14263, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6589552.1	1.1e-104	96.19	hypothetical protein SDJN03_14975, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023516749.1	1.6e-103	95.24	uncharacterized protein LOC111780554 [Cucurbita pepo subsp. pepo]	[more]
XP_038890344.1	4.7e-71	73.68	uncharacterized protein LOC120079943 [Benincasa hispida]	[more]

BLAST of CmoCh10G002530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13360.1	1.1e-12	33.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13360.2	4.4e-11	37.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13360.3	4.4e-11	37.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G25870.1	4.6e-08	37.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34539:SF15	SUBFAMILY NOT NAMED	coord: 5..205
None	No IPR available	PANTHER	PTHR34539	T6J4.11 PROTEIN	coord: 5..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G002530.1	CmoCh10G002530.1	mRNA