CmoCh10G001430 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh10G001430
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionNHL domain-containing protein
LocationCmo_Chr10: 659816 .. 661939 (+)
RNA-Seq ExpressionCmoCh10G001430
SyntenyCmoCh10G001430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCACTAGCAGTAAGCGCTCGGGGAATTCATTCGTCACTTTGGAAATCAAATTCAGTGAGTTCCTTCTCTTCCTTTTTTTATGAATCGCGTCTGTGTTCTTGATTTCAGTTTGGTAGCGCATTCCAATACGAATTATTCTCCCTTAAAATCGTTTCCATGGTTTCTCGTTACGGAACATCTTCTTCTTCTCGCCGTTCATTTTGCGTATCTTTCGATGTGCCTTTTAGGGCTCATGTTTTCCATTTTCCCCCTTTTCCGAGAGAATAACAGAGCATGAACACGCATGAAATTTCGCACTTACCTGCCATTGATGAGCAACCAGATACCTTTTGGATCTGAGGTAGGATATATTAACCAAACTGAAGTATCGCATTGCTCGACTGTACTCGGAAGCTAGATCGATGAAAGCAATTCTGATAATTCTCTCCCTTTTTTTGGTTGAAAATCTGAATAGATGCAAAGCAATAATCTAGAAAGCATTCAAAAACACATAATTGTACTGAAATTATTTCTTCAAATGCATTATAATCCTTGTGTTGAATCAAGGATGAACATCCACCGCAGTTGCATCTGGAATCGACTCTTTTCCATCTGCACATGAAAATGAGCCGTTGATTCTGGAGATCAAAGAAGAGAAGTATCTTGGAAGATGAGAAAAATATTTTTGTATCATGAAAGTGGTTGGTGGAGTGGGATTCACAATCCTAACAGCCACCAAATTGTTTCATAGTTCAAGTTCATTGTTGGTCTTTGTGATTATTACTTAATAAGGTGTTTGAATTATTATAATAAGAATGCAATGATTTGCTTGTTGAAGGTGTATTCTCCTTGCTGATTGCTTCAACCCAACACAAAGGCTCCATGGCCTTGCCAGGTGTATTCTACGGTCACAAAGTTGGTGATGCTTTCAGTAAGTCTCTCACCTTTCTTTTCTTTTCTTTTTAACCTAATTTTATTCTTATTTTTTAATTATAAATTATAAATCTTTATTAATTTTAGGATTTGTTTGTATATAACAAGTAAGATTTTCCATTCCATTTTTTTTTCTAATAATATATTTGAATTCTTAGAAATTAAAATCATTTTCGAAAATAACTTATGCAAAATGTTTAAAACAAATATACAATGCATACAACAACAAAACGTCCTGTCGCTCGAAGTAGCTAATAAGCTACCCACCAGCTGGCAAGGACGATAAGTCAGTGCGAAATGGATGACGACATGTCGGATTAAAAAGTGGGACCCATCTTGATTTAGTGATTGGGTACAACGAAGCATCGGTCCCACGATAAGTCAGTGCGAAATGGATGACGACATGTCGGATTAAAAAGTGGGACCCATCTTGATTTAGTGATTGGGTACAACGAAGCATCGGTCCCACCTTTATCCTACTTTTGGAACACCGGATTAGAATCCCCGCTTCCCTCCAAACAACCGCTCCAACGTCAGTAGATAAACTCGAATGAATGGTTACTCCCGGTGGTATTTGGGTCGGTTAGTCGCTTAAAATCCGTTTTGGTGACCGGAAGTGGCCGGTCACACAGGTCTAAGCTGGTTTCAGTTTCATTTTGATTGTGGCGCATAAAACTGCTGACAGAACCCATCGGTACAGTCCGATAATGGCGTATCCAGATGCAGAAGAGCCTCCTCCTTGCGAAGTGGATAATTCCAATTCTTTGTTGCCGACCACCAGGTGCGGCTGTTTCCGGTTATCGTGCTTGGAATTTCGCCGTGCGGTAGCCGTCGGGCCATCATGGTGGGAGAGGATTAGGGCGTCGCAGGTTCACAGCGAGGGGCGCTGGTGGGCGCGAGGCGTTAGGGTTATATTGAAGATCCGAGAGTGGTCTGAGATAGTCGCTGGACCGAGATGGAAGACTTTCATTCGCCGATTTAACCGGAATCGGAACGGTGGTGCTGGTGCTGGTAGGCCTGGGAAATTTCAATACGATCCGTTGAGTTACGCTATGAATTTTGATGAAGGTTCGAGGCAGATTGGGGAATTAGACGACGATAATGACGACTTCAATGGGTATCGGAACTTCTCTGCTCGTTACGCTTCAATACCGGCGCCGTTGAAGACCGGAGGAACAACTGGGAAGGATATATCTACCGTCGCGTAA

mRNA sequence

ATGATCACTAGCAGTAAGCGCTCGGGGAATTCATTCGTCACTTTGGAAATCAAATTCAGTGTATTCTCCTTGCTGATTGCTTCAACCCAACACAAAGGCTCCATGGCCTTGCCAGGTGTATTCTACGGTCACAAAGTTGGTGATGCTTTCAGTAAAACCCATCGGTACAGTCCGATAATGGCGTATCCAGATGCAGAAGAGCCTCCTCCTTGCGAAGTGGATAATTCCAATTCTTTGTTGCCGACCACCAGGTGCGGCTGTTTCCGGTTATCGTGCTTGGAATTTCGCCGTGCGGTAGCCGTCGGGCCATCATGGTGGGAGAGGATTAGGGCGTCGCAGGTTCACAGCGAGGGGCGCTGGTGGGCGCGAGGCGTTAGGGTTATATTGAAGATCCGAGAGTGGTCTGAGATAGTCGCTGGACCGAGATGGAAGACTTTCATTCGCCGATTTAACCGGAATCGGAACGGTGGTGCTGGTGCTGGTAGGCCTGGGAAATTTCAATACGATCCGTTGAGTTACGCTATGAATTTTGATGAAGGTTCGAGGCAGATTGGGGAATTAGACGACGATAATGACGACTTCAATGGGTATCGGAACTTCTCTGCTCGTTACGCTTCAATACCGGCGCCGTTGAAGACCGGAGGAACAACTGGGAAGGATATATCTACCGTCGCGTAA

Coding sequence (CDS)

ATGATCACTAGCAGTAAGCGCTCGGGGAATTCATTCGTCACTTTGGAAATCAAATTCAGTGTATTCTCCTTGCTGATTGCTTCAACCCAACACAAAGGCTCCATGGCCTTGCCAGGTGTATTCTACGGTCACAAAGTTGGTGATGCTTTCAGTAAAACCCATCGGTACAGTCCGATAATGGCGTATCCAGATGCAGAAGAGCCTCCTCCTTGCGAAGTGGATAATTCCAATTCTTTGTTGCCGACCACCAGGTGCGGCTGTTTCCGGTTATCGTGCTTGGAATTTCGCCGTGCGGTAGCCGTCGGGCCATCATGGTGGGAGAGGATTAGGGCGTCGCAGGTTCACAGCGAGGGGCGCTGGTGGGCGCGAGGCGTTAGGGTTATATTGAAGATCCGAGAGTGGTCTGAGATAGTCGCTGGACCGAGATGGAAGACTTTCATTCGCCGATTTAACCGGAATCGGAACGGTGGTGCTGGTGCTGGTAGGCCTGGGAAATTTCAATACGATCCGTTGAGTTACGCTATGAATTTTGATGAAGGTTCGAGGCAGATTGGGGAATTAGACGACGATAATGACGACTTCAATGGGTATCGGAACTTCTCTGCTCGTTACGCTTCAATACCGGCGCCGTTGAAGACCGGAGGAACAACTGGGAAGGATATATCTACCGTCGCGTAA

Protein sequence

MITSSKRSGNSFVTLEIKFSVFSLLIASTQHKGSMALPGVFYGHKVGDAFSKTHRYSPIMAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGAGRPGKFQYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
Homology
BLAST of CmoCh10G001430 vs. ExPASy TrEMBL
Match: A0A6J1E188 (uncharacterized protein LOC111429865 OS=Cucurbita moschata OX=3662 GN=LOC111429865 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.6e-94
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0

Query: 60  MAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGR 119
           MAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGR
Sbjct: 1   MAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGR 60

Query: 120 WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGAGRPGKFQYDPLSYAMNFDE 179
           WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGAGRPGKFQYDPLSYAMNFDE
Sbjct: 61  WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGAGRPGKFQYDPLSYAMNFDE 120

Query: 180 GSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 226
           GSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
Sbjct: 121 GSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 166

BLAST of CmoCh10G001430 vs. ExPASy TrEMBL
Match: A0A6J1JH52 (uncharacterized protein LOC111485666 OS=Cucurbita maxima OX=3661 GN=LOC111485666 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.0e-88
Identity = 161/171 (94.15%), Postives = 161/171 (94.15%), Query Frame = 0

Query: 60  MAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGR 119
           MAYPDAEEPPP E DNSNSLLPTTRCGCFRLSCLE RRAVAVGPSWWERIR SQVHSEGR
Sbjct: 1   MAYPDAEEPPPYEADNSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRGSQVHSEGR 60

Query: 120 WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAG-----AGRPGKFQYDPLSYA 179
           WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGG G     AGRPGKFQYDPLSYA
Sbjct: 61  WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGAAAGRPGKFQYDPLSYA 120

Query: 180 MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 226
           MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
Sbjct: 121 MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 171

BLAST of CmoCh10G001430 vs. ExPASy TrEMBL
Match: A0A5D3BK38 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001870 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 4.1e-74
Identity = 139/169 (82.25%), Postives = 143/169 (84.62%), Query Frame = 0

Query: 64  DAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGRWWAR 123
           D EE P CE D SNSLLPT RCGCFRLSC   RR   VGPSWWERIRASQVHSEGRWWAR
Sbjct: 7   DQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGRWWAR 66

Query: 124 GVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGAG-------RPGKFQYDPLSYAMN 183
           GV+VILK+REWSEIVAGPRWKTFIRRFNRNR+GG G G       R GKFQYDPLSYAMN
Sbjct: 67  GVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDPLSYAMN 126

Query: 184 FDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 226
           FDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Sbjct: 127 FDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA 173

BLAST of CmoCh10G001430 vs. ExPASy TrEMBL
Match: A0A1S3BVG0 (uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 4.1e-74
Identity = 139/169 (82.25%), Postives = 143/169 (84.62%), Query Frame = 0

Query: 64  DAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGRWWAR 123
           D EE P CE D SNSLLPT RCGCFRLSC   RR   VGPSWWERIRASQVHSEGRWWAR
Sbjct: 7   DQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGRWWAR 66

Query: 124 GVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGAG-------RPGKFQYDPLSYAMN 183
           GV+VILK+REWSEIVAGPRWKTFIRRFNRNR+GG G G       R GKFQYDPLSYAMN
Sbjct: 67  GVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDPLSYAMN 126

Query: 184 FDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 226
           FDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Sbjct: 127 FDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA 173

BLAST of CmoCh10G001430 vs. ExPASy TrEMBL
Match: A0A5A7UWM1 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001790 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 7.0e-74
Identity = 139/171 (81.29%), Postives = 143/171 (83.63%), Query Frame = 0

Query: 64  DAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGRWWAR 123
           D EE P CE D SNSLLPT RCGCFRLSC   RR   VGPSWWERIRASQVHSEGRWWAR
Sbjct: 7   DQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGRWWAR 66

Query: 124 GVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGAG---------RPGKFQYDPLSYA 183
           GV+VILK+REWSEIVAGPRWKTFIRRFNRNR+GG G G         R GKFQYDPLSYA
Sbjct: 67  GVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGGGSGVRAGKFQYDPLSYA 126

Query: 184 MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 226
           MNFDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Sbjct: 127 MNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA 175

BLAST of CmoCh10G001430 vs. NCBI nr
Match: XP_022921694.1 (uncharacterized protein LOC111429865 [Cucurbita moschata])

HSP 1 Score: 354.4 bits (908), Expect = 7.4e-94
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0

Query: 60  MAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGR 119
           MAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGR
Sbjct: 1   MAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGR 60

Query: 120 WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGAGRPGKFQYDPLSYAMNFDE 179
           WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGAGRPGKFQYDPLSYAMNFDE
Sbjct: 61  WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGAGRPGKFQYDPLSYAMNFDE 120

Query: 180 GSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 226
           GSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
Sbjct: 121 GSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 166

BLAST of CmoCh10G001430 vs. NCBI nr
Match: KAG6589457.1 (hypothetical protein SDJN03_14880, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 338.6 bits (867), Expect = 4.2e-89
Identity = 161/167 (96.41%), Postives = 161/167 (96.41%), Query Frame = 0

Query: 60  MAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGR 119
           MAYPDAEEPPPCE  NSNSLLPTTRCGCFRLSCLE RRAVAVGPSWWERIRASQVHSEGR
Sbjct: 1   MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGR 60

Query: 120 WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGA-GRPGKFQYDPLSYAMNFD 179
           WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGG GA GRPGKF YDPLSYAMNFD
Sbjct: 61  WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGATGRPGKFHYDPLSYAMNFD 120

Query: 180 EGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 226
           EGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
Sbjct: 121 EGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 167

BLAST of CmoCh10G001430 vs. NCBI nr
Match: XP_022988416.1 (uncharacterized protein LOC111485666 [Cucurbita maxima])

HSP 1 Score: 336.3 bits (861), Expect = 2.1e-88
Identity = 161/171 (94.15%), Postives = 161/171 (94.15%), Query Frame = 0

Query: 60  MAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGR 119
           MAYPDAEEPPP E DNSNSLLPTTRCGCFRLSCLE RRAVAVGPSWWERIR SQVHSEGR
Sbjct: 1   MAYPDAEEPPPYEADNSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRGSQVHSEGR 60

Query: 120 WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAG-----AGRPGKFQYDPLSYA 179
           WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGG G     AGRPGKFQYDPLSYA
Sbjct: 61  WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGAAAGRPGKFQYDPLSYA 120

Query: 180 MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 226
           MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
Sbjct: 121 MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 171

BLAST of CmoCh10G001430 vs. NCBI nr
Match: KAG7023141.1 (hypothetical protein SDJN02_14166, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335.5 bits (859), Expect = 3.5e-88
Identity = 160/171 (93.57%), Postives = 160/171 (93.57%), Query Frame = 0

Query: 60  MAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGR 119
           MAYPDAEEPPPCE  NSNSLLPTTRCGCFRLSCLE RRAVAVGPSWWERIRASQVHSEGR
Sbjct: 1   MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGR 60

Query: 120 WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAG-----AGRPGKFQYDPLSYA 179
           WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGG G      GRPGKF YDPLSYA
Sbjct: 61  WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGGGGGATGRPGKFHYDPLSYA 120

Query: 180 MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 226
           MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA
Sbjct: 121 MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 171

BLAST of CmoCh10G001430 vs. NCBI nr
Match: XP_023516338.1 (uncharacterized protein LOC111780229 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.3 bits (856), Expect = 7.9e-88
Identity = 159/171 (92.98%), Postives = 160/171 (93.57%), Query Frame = 0

Query: 60  MAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGR 119
           MAYPDAEEPPPCE D+SNSLLPTTRCGCFRLSCLE RRAVAVGPSWWERIRASQVHSEGR
Sbjct: 1   MAYPDAEEPPPCEADSSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGR 60

Query: 120 WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAG-----AGRPGKFQYDPLSYA 179
           WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNG  G     AGRPGKFQYDPLSYA
Sbjct: 61  WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGSGGGGAAAAGRPGKFQYDPLSYA 120

Query: 180 MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 226
           MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIP PLKTGG TGKDISTVA
Sbjct: 121 MNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPTPLKTGGATGKDISTVA 171

BLAST of CmoCh10G001430 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 1.4e-26
Identity = 65/137 (47.45%), Postives = 80/137 (58.39%), Query Frame = 0

Query: 72  EVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKI 131
           EV  +N LL  + C      C     +  V  SWW+RI  +  H E RWW   VR  LKI
Sbjct: 2   EVGQANPLLGESSC------C-----STTVKSSWWQRIHRNN-HQEPRWW---VRAFLKI 61

Query: 132 REWSEIVAGPRWKTFIRRFNRNRNGGAGAGRPGKFQYDPLSYAMNFDEGSRQIGELDDDN 191
           REWSEIVAGPRWKTFIRRFNR+   G       KF+YDP+SY ++F++  +     DDD 
Sbjct: 62  REWSEIVAGPRWKTFIRRFNRDPRRGQDWDDSDKFRYDPVSYTLSFEDEDKD----DDDE 119

Query: 192 DDFNGYRNFSARYASIP 209
               G R+FS RYAS+P
Sbjct: 122 AGVGGVRSFSMRYASVP 119

BLAST of CmoCh10G001430 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 115.5 bits (288), Expect = 5.4e-26
Identity = 69/135 (51.11%), Postives = 81/135 (60.00%), Query Frame = 0

Query: 84  RCGCFRLSCLEFRRAVAVGPSWWERIRA--SQVHS-----EGRWWARGVRVILKIREWSE 143
           RC CF  S    R + AVG S W RIR      HS     E RWW   +R  LKIREWSE
Sbjct: 19  RCCCFP-SFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWW---IRASLKIREWSE 78

Query: 144 IVAGPRWKTFIRRFNRNRNGGAGAGRPGKFQYDPLSYAMNFDEGSRQIGELDDDNDDF-- 203
           IVAGPRWKTFIRRFNR+   G       KFQYDPLSY++NFD+        DD+ D++  
Sbjct: 79  IVAGPRWKTFIRRFNRDPRRGRDWDASEKFQYDPLSYSLNFDD--------DDEEDEYVG 138

Query: 204 -NGYRNFSARYASIP 209
             G R+FS R+AS+P
Sbjct: 139 LGGLRSFSTRFASVP 141

BLAST of CmoCh10G001430 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.5 bits (280), Expect = 4.5e-25
Identity = 69/172 (40.12%), Postives = 95/172 (55.23%), Query Frame = 0

Query: 66  EEPPPCEVDNSNSL---LPTTRCGCFRLSCLEFRRAVAVGPS-WWERI-RASQVHSEGRW 125
           + PP  EVD ++ +   L   R  CF + CL   +    G S WW+RI    ++  + RW
Sbjct: 4   QSPPIAEVDATDDMHEALFAKRGCCFLMPCLASSQPSTRGGSVWWQRITTVDKLEPDERW 63

Query: 126 WARGVRVILKIREWSEIVAGPRWKTFIRRFNR------------NRNGGAGAGR------ 185
           W RG R   ++REWSE+VAGPRWKT+IRRF R            N +GG G G       
Sbjct: 64  WIRGWR---RMREWSELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPNRSS 123

Query: 186 -PGKFQYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKT 214
             GKF+YD LSY++NFD+G+ Q G  DD+      YR++S R+A+   P+ T
Sbjct: 124 DQGKFRYDQLSYSLNFDDGN-QTGHFDDEFP----YRDYSMRFAAPSLPVST 167

BLAST of CmoCh10G001430 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.5e-23
Identity = 66/171 (38.60%), Postives = 97/171 (56.73%), Query Frame = 0

Query: 51  SKTHRYSPIMAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCL-EFRRAVAVGPSWWERI 110
           +++H +  + ++P +E       D  +  +   R  CF L CL   + +   G  WW+RI
Sbjct: 578 NQSHCFMGLESFPISEMD---ATDEMHEAMFAKRGCCFILPCLGSSQPSGPNGSVWWQRI 637

Query: 111 R-ASQVHSEGRWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNR--NGG--AGAGRPG 170
           R   ++  + RWW  G    +K+REWSEIVAGP+WKTFIRRF RN   NGG   G  RP 
Sbjct: 638 RTVDKLEPDERWWVSG---WMKMREWSEIVAGPKWKTFIRRFGRNHCCNGGIDGGCNRPE 697

Query: 171 --KFQYDPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKT 214
              F+YD  SY++NFD+G +Q G  +D+      YR++S R+A+   P+ T
Sbjct: 698 HVSFRYDSWSYSLNFDDG-KQTGHFEDEFP----YRDYSMRFAAPSLPVST 737

BLAST of CmoCh10G001430 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 4.7e-06
Identity = 34/97 (35.05%), Postives = 46/97 (47.42%), Query Frame = 0

Query: 85  CGCFR-LSCLEFRRAVAVGPSWWERIRASQVHSEGRWWARGVRVILKIREWSEIVAGPRW 144
           CG FR  S   +RR      S        Q    G W   G   +  ++E SE +AGP+W
Sbjct: 22  CGYFRSFSFTRWRRGDDESRSRGGWSGCLQEERRGNW---GSEKLKGLKEISEKIAGPKW 81

Query: 145 KTFIRRFNRNRNGGAGAGRPGKFQYDPLSYAMNFDEG 181
           K FIR F+   +G     R   F YD  +Y++NFD+G
Sbjct: 82  KNFIRSFS---SGRKKMRRDVDFTYDLKNYSLNFDDG 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1E1883.6e-94100.00uncharacterized protein LOC111429865 OS=Cucurbita moschata OX=3662 GN=LOC1114298... [more]
A0A6J1JH521.0e-8894.15uncharacterized protein LOC111485666 OS=Cucurbita maxima OX=3661 GN=LOC111485666... [more]
A0A5D3BK384.1e-7482.25Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa... [more]
A0A1S3BVG04.1e-7482.25uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=... [more]
A0A5A7UWM17.0e-7481.29Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa... [more]
Match NameE-valueIdentityDescription
XP_022921694.17.4e-94100.00uncharacterized protein LOC111429865 [Cucurbita moschata][more]
KAG6589457.14.2e-8996.41hypothetical protein SDJN03_14880, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022988416.12.1e-8894.15uncharacterized protein LOC111485666 [Cucurbita maxima][more]
KAG7023141.13.5e-8893.57hypothetical protein SDJN02_14166, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023516338.17.9e-8892.98uncharacterized protein LOC111780229 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT3G48020.11.4e-2647.45unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G62865.15.4e-2651.11unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G01430.14.5e-2540.12BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:... [more]
AT5G14890.11.5e-2338.60NHL domain-containing protein [more]
AT5G25240.14.7e-0635.05unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47076NHL DOMAIN PROTEINcoord: 71..224
NoneNo IPR availablePANTHERPTHR47076:SF9BNAA06G16930D PROTEINcoord: 71..224

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G001430.1CmoCh10G001430.1mRNA